ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart56b02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF542188.1| Triticum aestivum cyc07 mRNA, complete cds Length = 820 Score = 983 bits (496), Expect = 0.0 Identities = 544/560 (97%) Strand = Plus / Plus Query: 41 cgccgcagcgccgccactccacccgcagcggcaaccatggcggtcggcaggaacaagcgc 100 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 31 cgccgcagcgccgccactccacccgcagcggcaaccatggcggtcggcaagaacaagcgc 90 Query: 101 atctccaaggggaggaagggtagcaagaagaaggccgtggatccgttcaccaagaagcag 160 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 91 atctccaaggggaggaagggaagcaagaagaaggccgtcgatccgttcaccaagaagcag 150 Query: 161 tggtatgacatcaaggcgccgctgctcttcaccagccgcaacgtcggcaagaccctcgtg 220 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151 tggtatgacatcaaggcgccgctgctgttcaccagccgcaacgtcggcaagaccctcgtg 210 Query: 221 tccaggacacagggtaccaagattgcctcagagggcctgaagcaccgggtgtttgaagta 280 |||||||| |||||||||||||||||||||||||| ||||||||| ||||||| |||||| Sbjct: 211 tccaggacgcagggtaccaagattgcctcagagggtctgaagcacagggtgttcgaagta 270 Query: 281 tctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgct 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 tctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgct 330 Query: 341 gaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgac 400 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 331 gaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggacttcaccactgac 390 Query: 401 aagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaag 460 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 391 aagctcaggtctcttgtgaggaagtggcagacactcattgaggctcatgtggatgtgaag 450 Query: 461 accactgacaattacatgctccgcatgtttgccattggcttcaccaagagacgcccaaac 520 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 451 accactgacaactacatgctccgcatgttcgccattggcttcaccaagagacgcccaaac 510 Query: 521 caggtcaagcgcacttgctatgctcaagcaagtcagatcagacagatccgccggaagatg 580 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 511 caggtgaagcgcacttgctatgcccaagcaagtcagatcagacagatccgccgcaagatg 570 Query: 581 gttgagatcatggtcaacca 600 |||||||||||||||||||| Sbjct: 571 gttgagatcatggtcaacca 590
>gb|AY290725.1| Triticum aestivum ribosomal protein S3a-like mRNA, partial sequence Length = 885 Score = 922 bits (465), Expect = 0.0 Identities = 537/561 (95%), Gaps = 1/561 (0%) Strand = Plus / Plus Query: 41 cgccgcagcgccgccactccacccgcagcggcaaccatggcggtcggcaggaacaagcgc 100 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 32 cgccgcagcgccgccactccacccgcagcggcaaccatggcggtcggcaagaacaagcgc 91 Query: 101 atctccaagggg-aggaagggtagcaagaagaaggccgtggatccgttcaccaagaagca 159 |||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 92 atctccaagggggaggaagggaagcaagaagaaggccgtcgatccgttcaccaagaagca 151 Query: 160 gtggtatgacatcaaggcgccgctgctcttcaccagccgcaacgtcggcaagaccctcgt 219 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 152 gtggtatgacatcaaggcgccgctgctgttcaccagccgcaacgtcggcaagaccctcgt 211 Query: 220 gtccaggacacagggtaccaagattgcctcagagggcctgaagcaccgggtgtttgaagt 279 ||||||||| |||||||||||||||| ||||||||| ||||||||| |||||| ||||| Sbjct: 212 gtccaggacgcagggtaccaagattgnctcagagggtctgaagcacanggtgttcgaagt 271 Query: 280 atctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgc 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 272 atctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgc 331 Query: 340 tgaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactga 399 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 332 tgaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggacttcaccactga 391 Query: 400 caagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaa 459 |||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 392 caagctcaagtctcttgtgaggaagtggcagacactcattgaggctcatgtggatgtgaa 451 Query: 460 gaccactgacaattacatgctccgcatgtttgccattggcttcaccaagagacgcccaaa 519 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 452 gaccactgacaactacatgctccgcatgttcgccattggcttcaccaagagacgcccaaa 511 Query: 520 ccaggtcaagcgcacttgctatgctcaagcaagtcagatcagacagatccgccggaagat 579 |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| Sbjct: 512 ccaggtgaagcgcacttgctatgcccaagcnagtcagatcagacagatccgccgcaagat 571 Query: 580 ggttgagatcatggtcaacca 600 || |||||| |||||||||| Sbjct: 572 ggntgagatattggtcaacca 592
>dbj|D26060.1|RICT151 Oryza sativa mRNA for cyc07, complete cds Length = 1065 Score = 333 bits (168), Expect = 4e-88 Identities = 444/536 (82%) Strand = Plus / Plus Query: 65 gcagcggcaaccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagc 124 |||||| || ||||||| || || | ||||||||||||||||||||||| |||||| | Sbjct: 84 gcagcgtcagccatggccgtaggtaagaacaagcgcatctccaaggggaagaagggatcc 143 Query: 125 aagaagaaggccgtggatccgttcaccaagaagcagtggtatgacatcaaggcgccgctg 184 ||||||||| |||| ||||| || | |||||| | |||||||| |||||||| ||| | Sbjct: 144 aagaagaagaccgtcgatccctttgctaagaaggactggtatgatatcaaggccccgtcg 203 Query: 185 ctcttcaccagccgcaacgtcggcaagaccctcgtgtccaggacacagggtaccaagatt 244 | |||| || ||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 204 gtgttcaatgtgcggaacatcggcaagaccctcgtgtccaggacacagggtacaaagatt 263 Query: 245 gcctcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttcagaacgat 304 || || |||||||| ||||| | |||||||| || || |||||||||| ||||||||| Sbjct: 264 gcttctgagggcctaaagcatagagtgtttgaggtctccttagctgatctccagaacgat 323 Query: 305 gaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtc 364 ||||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||| || Sbjct: 324 gaggatcaggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaagaacgtg 383 Query: 365 ctcacaaacttctggggcatggatttcaccactgacaagctcaggtctcttgtgaggaag 424 ||||| ||||| ||||||||| || || || || |||||||| || ||||| | |||| Sbjct: 384 ctcaccaacttttggggcatgtcgtttactaccgataagctcagatcacttgttaagaag 443 Query: 425 tggcagaccctcattgaggctcatgtcgatgtgaagaccactgacaattacatgctccgc 484 |||||||| || |||||||||||||| ||||| || ||||| ||| |||||||| || Sbjct: 444 tggcagacactgattgaggctcatgtggatgtcaaaaccacagacggctacatgctgcgt 503 Query: 485 atgtttgccattggcttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgct 544 |||| || |||||||||||| | || || |||||||| ||| | |||||||||||| Sbjct: 504 ctgttctgtatcggcttcaccaagcggcggcctaaccaggtgaagaggacttgctatgct 563 Query: 545 caagcaagtcagatcagacagatccgccggaagatggttgagatcatggtcaacca 600 ||||| ||||||||||||||||| || || ||||||||||| ||||||| |||||| Sbjct: 564 caagcgagtcagatcagacagattcgtcgcaagatggttgaaatcatggccaacca 619
>dbj|AK104243.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D02, full insert sequence Length = 1032 Score = 333 bits (168), Expect = 4e-88 Identities = 444/536 (82%) Strand = Plus / Plus Query: 65 gcagcggcaaccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagc 124 |||||| || ||||||| || || | ||||||||||||||||||||||| |||||| | Sbjct: 60 gcagcgtcagccatggccgtaggtaagaacaagcgcatctccaaggggaagaagggatcc 119 Query: 125 aagaagaaggccgtggatccgttcaccaagaagcagtggtatgacatcaaggcgccgctg 184 ||||||||| |||| ||||| || | |||||| | |||||||| |||||||| ||| | Sbjct: 120 aagaagaagaccgtcgatccctttgctaagaaggactggtatgatatcaaggccccgtcg 179 Query: 185 ctcttcaccagccgcaacgtcggcaagaccctcgtgtccaggacacagggtaccaagatt 244 | |||| || ||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 180 gtgttcaatgtgcggaacatcggcaagaccctcgtgtccaggacacagggtacaaagatt 239 Query: 245 gcctcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttcagaacgat 304 || || |||||||| ||||| | |||||||| || || |||||||||| ||||||||| Sbjct: 240 gcttctgagggcctaaagcatagagtgtttgaggtctccttagctgatctccagaacgat 299 Query: 305 gaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtc 364 ||||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||| || Sbjct: 300 gaggatcaggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaagaacgtg 359 Query: 365 ctcacaaacttctggggcatggatttcaccactgacaagctcaggtctcttgtgaggaag 424 ||||| ||||| ||||||||| || || || || |||||||| || ||||| | |||| Sbjct: 360 ctcaccaacttttggggcatgtcgtttactaccgataagctcagatcacttgttaagaag 419 Query: 425 tggcagaccctcattgaggctcatgtcgatgtgaagaccactgacaattacatgctccgc 484 |||||||| || |||||||||||||| ||||| || ||||| ||| |||||||| || Sbjct: 420 tggcagacactgattgaggctcatgtggatgtcaaaaccacagacggctacatgctgcgt 479 Query: 485 atgtttgccattggcttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgct 544 |||| || |||||||||||| | || || |||||||| ||| | |||||||||||| Sbjct: 480 ctgttctgtatcggcttcaccaagcggcggcctaaccaggtgaagaggacttgctatgct 539 Query: 545 caagcaagtcagatcagacagatccgccggaagatggttgagatcatggtcaacca 600 ||||| ||||||||||||||||| || || ||||||||||| ||||||| |||||| Sbjct: 540 caagcgagtcagatcagacagattcgtcgcaagatggttgaaatcatggccaacca 595
>dbj|AK069251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013H23, full insert sequence Length = 1097 Score = 333 bits (168), Expect = 4e-88 Identities = 444/536 (82%) Strand = Plus / Plus Query: 65 gcagcggcaaccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagc 124 |||||| || ||||||| || || | ||||||||||||||||||||||| |||||| | Sbjct: 61 gcagcgtcagccatggccgtaggtaagaacaagcgcatctccaaggggaagaagggatcc 120 Query: 125 aagaagaaggccgtggatccgttcaccaagaagcagtggtatgacatcaaggcgccgctg 184 ||||||||| |||| ||||| || | |||||| | |||||||| |||||||| ||| | Sbjct: 121 aagaagaagaccgtcgatccctttgctaagaaggactggtatgatatcaaggccccgtcg 180 Query: 185 ctcttcaccagccgcaacgtcggcaagaccctcgtgtccaggacacagggtaccaagatt 244 | |||| || ||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 181 gtgttcaatgtgcggaacatcggcaagaccctcgtgtccaggacacagggtacaaagatt 240 Query: 245 gcctcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttcagaacgat 304 || || |||||||| ||||| | |||||||| || || |||||||||| ||||||||| Sbjct: 241 gcttctgagggcctaaagcatagagtgtttgaggtctccttagctgatctccagaacgat 300 Query: 305 gaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtc 364 ||||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||| || Sbjct: 301 gaggatcaggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaagaacgtg 360 Query: 365 ctcacaaacttctggggcatggatttcaccactgacaagctcaggtctcttgtgaggaag 424 ||||| ||||| ||||||||| || || || || |||||||| || ||||| | |||| Sbjct: 361 ctcaccaacttttggggcatgtcgtttactaccgataagctcagatcacttgttaagaag 420 Query: 425 tggcagaccctcattgaggctcatgtcgatgtgaagaccactgacaattacatgctccgc 484 |||||||| || |||||||||||||| ||||| || ||||| ||| |||||||| || Sbjct: 421 tggcagacactgattgaggctcatgtggatgtcaaaaccacagacggctacatgctgcgt 480 Query: 485 atgtttgccattggcttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgct 544 |||| || |||||||||||| | || || |||||||| ||| | |||||||||||| Sbjct: 481 ctgttctgtatcggcttcaccaagcggcggcctaaccaggtgaagaggacttgctatgct 540 Query: 545 caagcaagtcagatcagacagatccgccggaagatggttgagatcatggtcaacca 600 ||||| ||||||||||||||||| || || ||||||||||| ||||||| |||||| Sbjct: 541 caagcgagtcagatcagacagattcgtcgcaagatggttgaaatcatggccaacca 596
>dbj|AK104699.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C03, full insert sequence Length = 942 Score = 319 bits (161), Expect = 6e-84 Identities = 419/505 (82%) Strand = Plus / Plus Query: 96 agcgcatctccaaggggaggaagggtagcaagaagaaggccgtggatccgttcaccaaga 155 |||||||||||||||||| |||||| |||||||||| |||| ||||| || | |||| Sbjct: 1 agcgcatctccaaggggaagaagggatccaagaagaagaccgtcgatccctttgctaaga 60 Query: 156 agcagtggtatgacatcaaggcgccgctgctcttcaccagccgcaacgtcggcaagaccc 215 || | |||||||| |||||||| ||| | | |||| || ||| |||||||||||| Sbjct: 61 aggactggtatgatatcaaggccccgtcggtgttcaatgtgcggaacatcggcaagaccc 120 Query: 216 tcgtgtccaggacacagggtaccaagattgcctcagagggcctgaagcaccgggtgtttg 275 |||||||||||||||||||||| |||||||| || |||||||| ||||| | ||||||| Sbjct: 121 tcgtgtccaggacacagggtacaaagattgcttctgagggcctaaagcatagagtgtttg 180 Query: 276 aagtatctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactcc 335 | || || |||||||||| |||||||||||||| ||||| ||||||||||||||||| | Sbjct: 181 aggtctccttagctgatctccagaacgatgaggatcaggcgtacaggaagatcagacttc 240 Query: 336 gtgctgaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcacca 395 ||||||||||||||||||||| ||| || ||||| ||||| ||||||||| || || | Sbjct: 241 gtgctgaggatgtgcaagggaagaacgtgctcaccaacttttggggcatgtcgtttacta 300 Query: 396 ctgacaagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatg 455 | || |||||||| || ||||| | |||||||||||| || |||||||||||||| |||| Sbjct: 301 ccgataagctcagatcacttgttaagaagtggcagacactgattgaggctcatgtggatg 360 Query: 456 tgaagaccactgacaattacatgctccgcatgtttgccattggcttcaccaagagacgcc 515 | || ||||| ||| |||||||| || |||| || |||||||||||| | || | Sbjct: 361 tcaaaaccacagacggctacatgctgcgtctgttctgtatcggcttcaccaagcggcggc 420 Query: 516 caaaccaggtcaagcgcacttgctatgctcaagcaagtcagatcagacagatccgccgga 575 | |||||||| ||| | ||||||||||||||||| ||||||||||||||||| || || | Sbjct: 421 ctaaccaggtgaagaggacttgctatgctcaagcgagtcagatcagacagattcgtcgca 480 Query: 576 agatggttgagatcatggtcaacca 600 |||||||||| ||||||| |||||| Sbjct: 481 agatggttgaaatcatggccaacca 505
>ref|XM_464995.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1063 Score = 313 bits (158), Expect = 4e-82 Identities = 434/526 (82%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaagg 134 ||||||| || |||| ||||||| | ||||||||||| |||||||| |||||||||||| Sbjct: 34 ccatggccgtgggcaagaacaagaggatctccaagggcaggaagggcagcaagaagaaga 93 Query: 135 ccgtggatccgttcaccaagaagcagtggtatgacatcaaggcgccgctgctcttcacca 194 |||| ||||| || |||||||| | ||||| ||||||||||||||| | ||| || Sbjct: 94 ccgtcgatcccttttccaagaaggattggtacgacatcaaggcgccgaccgtgttctccg 153 Query: 195 gccgcaacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcagagg 254 ||||||| |||||||||||||||| |||||||| ||||| ||||||||||| || |||| Sbjct: 154 tccgcaacatcggcaagaccctcgtctccaggacccaggggaccaagattgcatctgagg 213 Query: 255 gcctgaagcaccgggtgtttgaagtatctctagctgatcttcagaacgatgaggaccagg 314 | || ||||| || || |||||||| || | || ||||||||||| || ||||| |||| Sbjct: 214 gtctcaagcatcgtgtctttgaagtctccttggcggatcttcagaatgacgaggatcagg 273 Query: 315 cctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaact 374 | ||||||||| | ||||| |||||||||||||| || |||| |||||||||||| || | Sbjct: 274 cttacaggaaggttagacttcgtgctgaggatgttcaggggaggaatgtcctcacgaatt 333 Query: 375 tctggggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccc 434 ||||||||||| ||| ||||| ||||| || ||||| | || | ||| ||||| || Sbjct: 334 tctggggcatgagttttaccacggacaaacttaggtccttggtcaagaaatggcaaacat 393 Query: 435 tcattgaggctcatgtcgatgtgaagaccactgacaattacatgctccgcatgtttgcca 494 | ||||| || ||||| ||||| |||||||| || || |||||||||||| ||||| || Sbjct: 394 tgattgaagcccatgtggatgttaagaccacagataactacatgctccgcctgttttgca 453 Query: 495 ttggcttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctcaagcaagtc 554 |||| ||||||||| | |||||||| ||||| ||||| || || || ||||| || || | Sbjct: 454 ttggtttcaccaagcgccgcccaaatcaggtgaagcgtacctgttacgctcaggctagcc 513 Query: 555 agatcagacagatccgccggaagatggttgagatcatggtcaacca 600 ||||| | ||||||||||||||||||||||||||||||| |||||| Sbjct: 514 agatccggcagatccgccggaagatggttgagatcatggccaacca 559
>ref|XM_506775.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1115_D03.49 mRNA Length = 1171 Score = 313 bits (158), Expect = 4e-82 Identities = 434/526 (82%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaagg 134 ||||||| || |||| ||||||| | ||||||||||| |||||||| |||||||||||| Sbjct: 70 ccatggccgtgggcaagaacaagaggatctccaagggcaggaagggcagcaagaagaaga 129 Query: 135 ccgtggatccgttcaccaagaagcagtggtatgacatcaaggcgccgctgctcttcacca 194 |||| ||||| || |||||||| | ||||| ||||||||||||||| | ||| || Sbjct: 130 ccgtcgatcccttttccaagaaggattggtacgacatcaaggcgccgaccgtgttctccg 189 Query: 195 gccgcaacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcagagg 254 ||||||| |||||||||||||||| |||||||| ||||| ||||||||||| || |||| Sbjct: 190 tccgcaacatcggcaagaccctcgtctccaggacccaggggaccaagattgcatctgagg 249 Query: 255 gcctgaagcaccgggtgtttgaagtatctctagctgatcttcagaacgatgaggaccagg 314 | || ||||| || || |||||||| || | || ||||||||||| || ||||| |||| Sbjct: 250 gtctcaagcatcgtgtctttgaagtctccttggcggatcttcagaatgacgaggatcagg 309 Query: 315 cctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaact 374 | ||||||||| | ||||| |||||||||||||| || |||| |||||||||||| || | Sbjct: 310 cttacaggaaggttagacttcgtgctgaggatgttcaggggaggaatgtcctcacgaatt 369 Query: 375 tctggggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccc 434 ||||||||||| ||| ||||| ||||| || ||||| | || | ||| ||||| || Sbjct: 370 tctggggcatgagttttaccacggacaaacttaggtccttggtcaagaaatggcaaacat 429 Query: 435 tcattgaggctcatgtcgatgtgaagaccactgacaattacatgctccgcatgtttgcca 494 | ||||| || ||||| ||||| |||||||| || || |||||||||||| ||||| || Sbjct: 430 tgattgaagcccatgtggatgttaagaccacagataactacatgctccgcctgttttgca 489 Query: 495 ttggcttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctcaagcaagtc 554 |||| ||||||||| | |||||||| ||||| ||||| || || || ||||| || || | Sbjct: 490 ttggtttcaccaagcgccgcccaaatcaggtgaagcgtacctgttacgctcaggctagcc 549 Query: 555 agatcagacagatccgccggaagatggttgagatcatggtcaacca 600 ||||| | ||||||||||||||||||||||||||||||| |||||| Sbjct: 550 agatccggcagatccgccggaagatggttgagatcatggccaacca 595
>dbj|AK099131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048M05, full insert sequence Length = 1063 Score = 305 bits (154), Expect = 9e-80 Identities = 433/526 (82%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaagg 134 ||||||| || |||| |||| || | ||||||||||| |||||||| |||||||||||| Sbjct: 34 ccatggccgtgggcaagaacgagaggatctccaagggcaggaagggcagcaagaagaaga 93 Query: 135 ccgtggatccgttcaccaagaagcagtggtatgacatcaaggcgccgctgctcttcacca 194 |||| ||||| || |||||||| | ||||| ||||||||||||||| | ||| || Sbjct: 94 ccgtcgatcccttttccaagaaggattggtacgacatcaaggcgccgaccgtgttctccg 153 Query: 195 gccgcaacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcagagg 254 ||||||| |||||||||||||||| |||||||| ||||| ||||||||||| || |||| Sbjct: 154 tccgcaacatcggcaagaccctcgtctccaggacccaggggaccaagattgcatctgagg 213 Query: 255 gcctgaagcaccgggtgtttgaagtatctctagctgatcttcagaacgatgaggaccagg 314 | || ||||| || || |||||||| || | || ||||||||||| || ||||| |||| Sbjct: 214 gtctcaagcatcgtgtctttgaagtctccttggcggatcttcagaatgacgaggatcagg 273 Query: 315 cctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaact 374 | ||||||||| | ||||| |||||||||||||| || |||| |||||||||||| || | Sbjct: 274 cttacaggaaggttagacttcgtgctgaggatgttcaggggaggaatgtcctcacgaatt 333 Query: 375 tctggggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccc 434 ||||||||||| ||| ||||| ||||| || ||||| | || | ||| ||||| || Sbjct: 334 tctggggcatgagttttaccacggacaaacttaggtccttggtcaagaaatggcaaacat 393 Query: 435 tcattgaggctcatgtcgatgtgaagaccactgacaattacatgctccgcatgtttgcca 494 | ||||| || ||||| ||||| |||||||| || || |||||||||||| ||||| || Sbjct: 394 tgattgaagcccatgtggatgttaagaccacagataactacatgctccgcctgttttgca 453 Query: 495 ttggcttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctcaagcaagtc 554 |||| ||||||||| | |||||||| ||||| ||||| || || || ||||| || || | Sbjct: 454 ttggtttcaccaagcgccgcccaaatcaggtgaagcgtacctgttacgctcaggctagcc 513 Query: 555 agatcagacagatccgccggaagatggttgagatcatggtcaacca 600 ||||| | ||||||||||||||||||||||||||||||| |||||| Sbjct: 514 agatccggcagatccgccggaagatggttgagatcatggccaacca 559
>dbj|AK059647.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C03, full insert sequence Length = 1171 Score = 305 bits (154), Expect = 9e-80 Identities = 433/526 (82%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaagg 134 ||||||| || |||| ||||||| | ||||||||||| |||||||| |||||||||||| Sbjct: 70 ccatggccgtgggcaagaacaagaggatctccaagggcaggaagggcagcaagaagaaga 129 Query: 135 ccgtggatccgttcaccaagaagcagtggtatgacatcaaggcgccgctgctcttcacca 194 |||| ||||| || |||||||| | ||||| ||||||||||||||| | ||| || Sbjct: 130 ccgtcgatcccttttccaagaaggattggtacgacatcaaggcgccgaccgtgttctccg 189 Query: 195 gccgcaacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcagagg 254 ||||||| |||||||||||||||| |||||||| ||||| ||||||||||| || |||| Sbjct: 190 tccgcaacatcggcaagaccctcgtctccaggacccaggggaccaagattgcatctgagg 249 Query: 255 gcctgaagcaccgggtgtttgaagtatctctagctgatcttcagaacgatgaggaccagg 314 | || ||||| || || |||||||| || | || ||||||||||| || ||||| |||| Sbjct: 250 gtctcaagcatcgtgtctttgaagtctccttggcggatcttcagaatgacgaggatcagg 309 Query: 315 cctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaact 374 | ||||||||| | ||||| |||||||||||||| || |||| |||||||||||| || | Sbjct: 310 cttacaggaaggttagacttcgtgctgaggatgttcaggggaggaatgtcctcacgaatt 369 Query: 375 tctggggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccc 434 ||||||||||| ||| ||||| ||||| || ||||| | || | ||| ||||| || Sbjct: 370 tctggggcatgagttttaccacggacaaacttaggtccttggtcaagaaatggcaaacat 429 Query: 435 tcattgaggctcatgtcgatgtgaagaccactgacaattacatgctccgcatgtttgcca 494 | ||||| || ||||| ||||| |||||||| || || |||||||||||| ||||| || Sbjct: 430 tgattgaagcccatgtggatgttaagaccacagataactacatgctccgcctgttttgca 489 Query: 495 ttggcttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctcaagcaagtc 554 |||| ||||||||| | |||||||| ||||| ||||| || || || ||||| || || | Sbjct: 490 ttggtttcaccaagcgccgcccaaatcaggtgaagcgtacctgttacgctcaggctagcc 549 Query: 555 agatcagacagatccgccggaagatggttgagatcatggtcaacca 600 ||||| | ||||||| ||||||||||||||||||||||| |||||| Sbjct: 550 agatccggcagatcctccggaagatggttgagatcatggccaacca 595
>dbj|AK071037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079A13, full insert sequence Length = 1118 Score = 301 bits (152), Expect = 1e-78 Identities = 440/536 (82%) Strand = Plus / Plus Query: 65 gcagcggcaaccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagc 124 |||||| || ||||||| ||||||| ||||||||| ||||| ||||||| |||||| | Sbjct: 92 gcagcgtcagccatggccgtcggcaagaacaagcggatctcgaaggggaagaagggatcc 151 Query: 125 aagaagaaggccgtggatccgttcaccaagaagcagtggtatgacatcaaggcgccgctg 184 ||||||||| |||| ||||| || | |||||| | |||||||| |||||||| ||| | Sbjct: 152 aagaagaagaccgtcgatccttttgcgaagaaggattggtatgatatcaaggccccgtcg 211 Query: 185 ctcttcaccagccgcaacgtcggcaagaccctcgtgtccaggacacagggtaccaagatt 244 | |||| | | |||||||| ||||| |||||||||||||||||||| || |||||| Sbjct: 212 gtgttcaacgtgagaaacgtcgggaagacgctcgtgtccaggacacagggcacaaagatt 271 Query: 245 gcctcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttcagaacgat 304 || ||||||||||| |||||||| |||||||| || || | |||||||||||||||||| Sbjct: 272 gcttcagagggcctcaagcaccgtgtgtttgaggtctccttggctgatcttcagaacgat 331 Query: 305 gaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtc 364 ||||| ||||| ||| | ||||||||||| ||||| ||||||||||| |||| ||||| Sbjct: 332 gaggatcaggcgtaccgtaagatcagactacgtgccgaggatgtgcaggggaaaaatgtt 391 Query: 365 ctcacaaacttctggggcatggatttcaccactgacaagctcaggtctcttgtgaggaag 424 || |||||||||||||||||| |||||| || ||||||||||| || | || | ||| Sbjct: 392 cttacaaacttctggggcatgagtttcacgaccgacaagctcagatcattggtcaagaaa 451 Query: 425 tggcagaccctcattgaggctcatgtcgatgtgaagaccactgacaattacatgctccgc 484 |||||||| || || ||||||||||| ||||| |||||||||| || |||||||| || Sbjct: 452 tggcagacgctaatagaggctcatgtggatgtagagaccactgataactacatgctgcgt 511 Query: 485 atgtttgccattggcttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgct 544 | || | |||||||||||||||| | ||||| || ||||| || || ||||||||| Sbjct: 512 ctcttctgcgttggcttcaccaagaggaggccaaatcaagtcaaacggacatgctatgct 571 Query: 545 caagcaagtcagatcagacagatccgccggaagatggttgagatcatggtcaacca 600 |||||||| ||||| |||||||||| || |||||||| |||| |||||| ||||| Sbjct: 572 caagcaagccagattcgacagatccgtcgcaagatggtggagaccatggtgaacca 627
>gb|AF052503.1|AF052503 Oryza sativa S-phase-specific ribosomal protein (RSPSP94) mRNA, complete cds Length = 1027 Score = 276 bits (139), Expect = 8e-71 Identities = 432/527 (81%), Gaps = 2/527 (0%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaagg 134 ||||||| || |||| ||||||| | ||||||||||| |||||||| |||||||||||| Sbjct: 31 ccatggccgtgggcaagaacaagaggatctccaagggcaggaagggcagcaagaagaaga 90 Query: 135 ccgtggatccgttcaccaagaagcagtggtatgacatcaaggcgccgctgctcttcacca 194 |||| ||||| || |||||||| | ||||| ||||||||||||||| | ||| || Sbjct: 91 ccgtcgatcccttttccaagaaggattggtacgacatcaaggcgccgaccgtgttctccg 150 Query: 195 gccgcaacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcagagg 254 ||||||| |||||||||||||||| |||||||| ||||| ||||||||||| || |||| Sbjct: 151 tccgcaacatcggcaagaccctcgtctccaggacccaggggaccaagattgcatctgagg 210 Query: 255 gcctgaagcaccgggtgtttgaagtatctctagctgatcttcagaacgatgaggaccagg 314 | || ||||| || || |||||||| || | || ||||||| ||| || ||||| |||| Sbjct: 211 gtctcaagcatcgtgtctttgaagtctccttggcggatcttcggaatgacgaggatcagg 270 Query: 315 cctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaact 374 | ||||||||| | ||||| |||||||||||||| || |||| |||||||||||| || | Sbjct: 271 cttacaggaaggttagacttcgtgctgaggatgttcaggggaggaatgtcctcacgaatt 330 Query: 375 tctggggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccc 434 ||||||||||| ||| ||||| ||||| || ||||| | || | ||| ||||| || Sbjct: 331 tctggggcatgagttttaccacggacaaacttaggtccttggtcaagaaatggcaaacat 390 Query: 435 tcattgaggctcatgtcgatgtgaagaccactgacaattacatgctccgcatgtttgcca 494 | ||||| || ||||| ||||| |||||||| || || |||||||||||| ||||| || Sbjct: 391 tgattgaagcccatgtggatgttaagaccacagataactacatgctccgcctgttttgca 450 Query: 495 ttggcttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctcaagcaagtc 554 |||| ||||||||| | |||||||| ||||| ||||| || || || |||| || || | Sbjct: 451 ttggtttcaccaagcgccgcccaaatcaggtgaagcgtacctgttacgctc-aggtagcc 509 Query: 555 agatcagacagat-ccgccggaagatggttgagatcatggtcaacca 600 ||||| | ||||| |||||||||||||||||||||||||| |||||| Sbjct: 510 agatccggcagatcccgccggaagatggttgagatcatggccaacca 556
>gb|BT016390.1| Zea mays clone Contig223 mRNA sequence Length = 1104 Score = 264 bits (133), Expect = 3e-67 Identities = 433/533 (81%) Strand = Plus / Plus Query: 68 gcggcaaccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaag 127 ||||| |||||||| ||||| | ||||||| | ||||||||||| | ||||||| ||||| Sbjct: 65 gcggcgaccatggctgtcggaaagaacaagaggatctccaagggaaagaagggtggcaag 124 Query: 128 aagaaggccgtggatccgttcaccaagaagcagtggtatgacatcaaggcgccgctgctc 187 || ||| |||| || || ||| | |||||| | ||||||||||||||||| ||| | | Sbjct: 125 aaaaagaccgtcgaccctttctctaagaaggattggtatgacatcaaggcaccgtcggtg 184 Query: 188 ttcaccagccgcaacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcc 247 |||| |||||| |||| ||||| ||||| ||||||||||||||||||| |||||| Sbjct: 185 ttcagtgtgcgcaacatcgggaagactctcgtatccaggacacagggtaccaggattgct 244 Query: 248 tcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttcagaacgatgag 307 || ||||| ||||||||| | || ||||| || | ||||||||||||||| ||| ||| Sbjct: 245 tctgagggtctgaagcacagagtctttgaggtttgcctagctgatcttcagggcgacgag 304 Query: 308 gaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctc 367 || || || |||||||| ||||| ||||||||||| |||||||| || | |||||| ||| Sbjct: 305 gatcaagcttacaggaaaatcaggctccgtgctgaagatgtgcagggcaggaatgtgctc 364 Query: 368 acaaacttctggggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtgg 427 |||||||| ||||| ||| |||| |||||||| || || || || || |||| ||||||| Sbjct: 365 acaaacttttggggtatgaattttaccactgataaactgagatccctagtgaagaagtgg 424 Query: 428 cagaccctcattgaggctcatgtcgatgtgaagaccactgacaattacatgctccgcatg 487 ||||| | || || || ||||| ||||| ||||| || ||||| |||||| | || || Sbjct: 425 cagacattaatcgaagcccatgttgatgtcaagacaaccgacaactacatgttgcgtttg 484 Query: 488 tttgccattggcttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctcaa 547 || ||| |||||||||||||| ||||||||||| |||||| | || ||||||||||| Sbjct: 485 ttctgcatcggcttcaccaagaggcgcccaaaccaagtcaagagaacctgctatgctcag 544 Query: 548 gcaagtcagatcagacagatccgccggaagatggttgagatcatggtcaacca 600 ||| |||||| | ||||||||||| |||||||||||||| ||| ||||||| Sbjct: 545 gcatcccagatccgtcagatccgccgaaagatggttgagattatgatcaacca 597
>gb|AY109383.1| Zea mays CL7224_1 mRNA sequence Length = 1236 Score = 161 bits (81), Expect = 3e-36 Identities = 222/269 (82%) Strand = Plus / Minus Query: 332 ctccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttc 391 ||||||||||| ||||||||||| | |||||| ||||||||||| ||||| ||| |||| Sbjct: 866 ctccgtgctgaagatgtgcaaggcaggaatgtgctcacaaacttttggggtatgaatttt 807 Query: 392 accactgacaagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtc 451 |||||||| || || || || || |||| |||||||||||| | || || || ||||| Sbjct: 806 accactgataaactgagatccctagtgaagaagtggcagacattaatcgaagcccatgtt 747 Query: 452 gatgtgaagaccactgacaattacatgctccgcatgtttgccattggcttcaccaagaga 511 ||||| ||||| || ||||| |||||| | || |||| ||| |||||||||||||| Sbjct: 746 gatgtcaagacaaccgacaactacatgttgcgtttgttctgcatcggcttcaccaagagg 687 Query: 512 cgcccaaaccaggtcaagcgcacttgctatgctcaagcaagtcagatcagacagatccgc 571 |||||||||||||||||| | || ||||||||||| ||| |||||| | ||||||||| Sbjct: 686 cgcccaaaccaggtcaagagaacctgctatgctcaggcatcccagatccgtcagatccgc 627 Query: 572 cggaagatggttgagatcatggtcaacca 600 || |||||||||||||| ||| ||||||| Sbjct: 626 cgtaagatggttgagattatgatcaacca 598 Score = 89.7 bits (45), Expect = 1e-14 Identities = 159/198 (80%) Strand = Plus / Minus Query: 68 gcggcaaccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaag 127 ||||| |||||||| ||||| | ||||||| | ||||||||||| | ||||||| ||||| Sbjct: 1130 gcggcgaccatggctgtcggaaagaacaagaggatctccaagggaaagaagggtggcaag 1071 Query: 128 aagaaggccgtggatccgttcaccaagaagcagtggtatgacatcaaggcgccgctgctc 187 || |||| || || ||| | |||||| | ||||||||||||||||| ||| | | Sbjct: 1070 nnncagaccgtcgaccctttctctaagaaggattggtatgacatcaaggcaccgtcggtg 1011 Query: 188 ttcaccagccgcaacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcc 247 |||| |||||| |||| ||||| ||||| ||||||||||||||||||| |||||| Sbjct: 1010 ttcagtgtgcgcaacatcgggaagactctcgtatccaggacacagggtaccaggattgct 951 Query: 248 tcagagggcctgaagcac 265 || ||||| ||||||||| Sbjct: 950 tctgagggtctgaagcac 933
>gb|AY849388.1| Vitis vinifera cultivar Riesling cyc07 mRNA, partial cds Length = 879 Score = 159 bits (80), Expect = 1e-35 Identities = 152/176 (86%) Strand = Plus / Plus Query: 287 gctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgctgaggat 346 ||||||||||||||||||||||| | ||||||||||||||| |||| | ||||||||| Sbjct: 145 gctgatcttcagaacgatgaggatcgtgcctacaggaagatccgactgagagctgaggat 204 Query: 347 gtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgacaagctc 406 |||||||| | |||||||||||||||||||||||| ||||| || || || |||||||| Sbjct: 205 gtgcaaggaaagaatgtcctcacaaacttctggggaatggactttacaacagacaagctg 264 Query: 407 aggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaagac 462 |||||| | ||| | ||||||||||| | |||||||||||||| ||||| ||||| Sbjct: 265 aggtctttggtgcgcaagtggcagacattgattgaggctcatgtggatgttaagac 320
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 149 bits (75), Expect = 1e-32 Identities = 84/87 (96%) Strand = Plus / Minus Query: 429 agaccctcattgaggctcatgtcgatgtgaagaccactgacaattacatgctccgcatgt 488 |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 46711 agaccctcattgaggctcatgtggatgtgaagacaactgacaattacatgctccgcatgt 46652 Query: 489 ttgccattggcttcaccaagagacgcc 515 ||||||||||||||||||||| ||||| Sbjct: 46651 ttgccattggcttcaccaagaaacgcc 46625 Score = 79.8 bits (40), Expect = 9e-12 Identities = 49/52 (94%) Strand = Plus / Minus Query: 427 gcagaccctcattgaggctcatgtcgatgtgaagaccactgacaattacatg 478 |||||||||||||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 46885 gcagaccctcattgaggctcatgtggatgtgaagacaactgacaactacatg 46834 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 431 accctcattgaggctcatgtcgatgtgaagaccactgacaattacatg 478 |||||||||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 47052 accctcattgaggctcatgtggatgtgaagacaactgacaactacatg 47005
>ref|NM_119633.2| Arabidopsis thaliana structural constituent of ribosome AT4G34670 mRNA, complete cds Length = 1093 Score = 139 bits (70), Expect = 1e-29 Identities = 315/394 (79%), Gaps = 2/394 (0%) Strand = Plus / Plus Query: 73 aaccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaa 132 ||||||||| ||||| | ||||||| | || || ||||| ||||| || | |||||||| Sbjct: 75 aaccatggctgtcgggaagaacaagaggatttcaaagggtaggaaaggaggaaagaagaa 134 Query: 133 ggccgtggatccgttcaccaagaagcagtggtatgacatcaaggcgcc-gctgctcttca 191 ||| || ||||| ||| |||||||| | ||||||||| | ||||| || | | || |||| Sbjct: 135 ggctgttgatcccttctccaagaaggattggtatgacgtgaaggctcctggttct-ttca 193 Query: 192 ccagccgcaacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcag 251 | | | | || || || ||||| || || |||||||| |||||||||||||||||||| | Sbjct: 194 cgaacaggaatgttgggaagactcttgtttccaggactcagggtaccaagattgcctctg 253 Query: 252 agggcctgaagcaccgggtgtttgaagtatctctagctgatcttcagaacgatgaggacc 311 |||| ||||| ||| |||||||||| || ||||| |||||||| || || |||||||| Sbjct: 254 agggactgaaacacagggtgtttgaggtttctcttgctgatctacaaaatgatgaggata 313 Query: 312 aggcctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaa 371 | ||||||||||||||| | || | ||||| ||||| || || | |||||| | || Sbjct: 314 atgcctacaggaagatccgtcttagagctgaagatgttcagggaaggaatgtgttgaccc 373 Query: 372 acttctggggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcaga 431 | |||||||| ||||||||||| || |||||||| ||||| | |||| ||||||||||| Sbjct: 374 agttctggggtatggatttcacaaccgacaagctaaggtcattggtgaagaagtggcaga 433 Query: 432 ccctcattgaggctcatgtcgatgtgaagaccac 465 | | ||||| || |||||||||||||| ||||| Sbjct: 434 ctttgattgaagcccatgtcgatgtgaaaaccac 467
>gb|AY062500.1| Arabidopsis thaliana Putative S-phase-specific ribosomal protein (At4g34670; T4L20.250) mRNA, complete cds Length = 1094 Score = 139 bits (70), Expect = 1e-29 Identities = 315/394 (79%), Gaps = 2/394 (0%) Strand = Plus / Plus Query: 73 aaccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaa 132 ||||||||| ||||| | ||||||| | || || ||||| ||||| || | |||||||| Sbjct: 75 aaccatggctgtcgggaagaacaagaggatttcaaagggtaggaaaggaggaaagaagaa 134 Query: 133 ggccgtggatccgttcaccaagaagcagtggtatgacatcaaggcgcc-gctgctcttca 191 ||| || ||||| ||| |||||||| | ||||||||| | ||||| || | | || |||| Sbjct: 135 ggctgttgatcccttctccaagaaggattggtatgacgtgaaggctcctggttct-ttca 193 Query: 192 ccagccgcaacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcag 251 | | | | || || || ||||| || || |||||||| |||||||||||||||||||| | Sbjct: 194 cgaacaggaatgttgggaagactcttgtttccaggactcagggtaccaagattgcctctg 253 Query: 252 agggcctgaagcaccgggtgtttgaagtatctctagctgatcttcagaacgatgaggacc 311 |||| ||||| ||| |||||||||| || ||||| |||||||| || || |||||||| Sbjct: 254 agggactgaaacacagggtgtttgaggtttctcttgctgatctacaaaatgatgaggata 313 Query: 312 aggcctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaa 371 | ||||||||||||||| | || | ||||| ||||| || || | |||||| | || Sbjct: 314 atgcctacaggaagatccgtcttagagctgaagatgttcagggaaggaatgtgttgaccc 373 Query: 372 acttctggggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcaga 431 | |||||||| ||||||||||| || |||||||| ||||| | |||| ||||||||||| Sbjct: 374 agttctggggtatggatttcacaaccgacaagctaaggtcattggtgaagaagtggcaga 433 Query: 432 ccctcattgaggctcatgtcgatgtgaagaccac 465 | | ||||| || |||||||||||||| ||||| Sbjct: 434 ctttgattgaagcccatgtcgatgtgaaaaccac 467
>emb|BX828268.1|CNS0A2YE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH6ZD12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1008 Score = 139 bits (70), Expect = 1e-29 Identities = 315/394 (79%), Gaps = 2/394 (0%) Strand = Plus / Plus Query: 73 aaccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaa 132 ||||||||| ||||| | ||||||| | || || ||||| ||||| || | |||||||| Sbjct: 60 aaccatggctgtcgggaagaacaagaggatttcaaagggtaggaaaggaggaaagaagaa 119 Query: 133 ggccgtggatccgttcaccaagaagcagtggtatgacatcaaggcgcc-gctgctcttca 191 ||| || ||||| ||| |||||||| | ||||||||| | ||||| || | | || |||| Sbjct: 120 ggctgttgatcccttctccaagaaggattggtatgacgtgaaggctcctggttct-ttca 178 Query: 192 ccagccgcaacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcag 251 | | | | || || || ||||| || || |||||||| |||||||||||||||||||| | Sbjct: 179 cgaacaggaatgttgggaagactcttgtttccaggactcagggtaccaagattgcctctg 238 Query: 252 agggcctgaagcaccgggtgtttgaagtatctctagctgatcttcagaacgatgaggacc 311 |||| ||||| ||| |||||||||| || ||||| |||||||| || || |||||||| Sbjct: 239 agggactgaaacacagggtgtttgaggtttctcttgctgatctacaaaatgatgaggata 298 Query: 312 aggcctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaa 371 | ||||||||||||||| | || | ||||| ||||| || || | |||||| | || Sbjct: 299 atgcctacaggaagatccgtcttagagctgaagatgttcagggaaggaatgtgttgaccc 358 Query: 372 acttctggggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcaga 431 | |||||||| ||||||||||| || |||||||| ||||| | |||| ||||||||||| Sbjct: 359 agttctggggtatggatttcacaaccgacaagctaaggtcattggtgaagaagtggcaga 418 Query: 432 ccctcattgaggctcatgtcgatgtgaagaccac 465 | | ||||| || |||||||||||||| ||||| Sbjct: 419 ctttgattgaagcccatgtcgatgtgaaaaccac 452
>gb|BT000122.1| Arabidopsis thaliana Putative S-phase-specific ribosomal protein (At4g34670) mRNA, complete cds Length = 581 Score = 137 bits (69), Expect = 5e-29 Identities = 314/393 (79%), Gaps = 2/393 (0%) Strand = Plus / Minus Query: 74 accatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaag 133 |||||||| ||||| | ||||||| | || || ||||| ||||| || | ||||||||| Sbjct: 581 accatggctgtcgggaagaacaagaggatttcaaagggtaggaaaggaggaaagaagaag 522 Query: 134 gccgtggatccgttcaccaagaagcagtggtatgacatcaaggcgcc-gctgctcttcac 192 || || ||||| ||| |||||||| | ||||||||| | ||||| || | | || ||||| Sbjct: 521 gctgttgatcccttctccaagaaggattggtatgacgtgaaggctcctggttct-ttcac 463 Query: 193 cagccgcaacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcaga 252 | | | || || || ||||| || || |||||||| |||||||||||||||||||| || Sbjct: 462 gaacaggaatgttgggaagactcttgtttccaggactcagggtaccaagattgcctctga 403 Query: 253 gggcctgaagcaccgggtgtttgaagtatctctagctgatcttcagaacgatgaggacca 312 ||| ||||| ||| |||||||||| || ||||| |||||||| || || |||||||| | Sbjct: 402 gggactgaaacacagggtgtttgaggtttctcttgctgatctacaaaatgatgaggataa 343 Query: 313 ggcctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaa 372 ||||||||||||||| | || | ||||| ||||| || || | |||||| | || | Sbjct: 342 tgcctacaggaagatccgtcttagagctgaagatgttcagggaaggaatgtgttgaccca 283 Query: 373 cttctggggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagac 432 |||||||| ||||||||||| || |||||||| ||||| | |||| |||||||||||| Sbjct: 282 gttctggggtatggatttcacaaccgacaagctaaggtcattggtgaagaagtggcagac 223 Query: 433 cctcattgaggctcatgtcgatgtgaagaccac 465 | ||||| || |||||||||||||| ||||| Sbjct: 222 tttgattgaagcccatgtcgatgtgaaaaccac 190
>gb|DQ164221.1| Nicotiana tabacum cyc07 mRNA, complete cds Length = 786 Score = 137 bits (69), Expect = 5e-29 Identities = 210/257 (81%) Strand = Plus / Plus Query: 200 aacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcagagggcctg 259 ||||| ||||||||||| || | ||||| |||||||| |||||||| || || || || Sbjct: 124 aacgttggcaagaccctggtcactaggactcagggtactaagattgcttcggaaggacta 183 Query: 260 aagcaccgggtgtttgaagtatctctagctgatcttcagaacgatgaggaccaggcctac 319 |||||| | || |||||||| | | |||||||||||||| |||||||| || | | | Sbjct: 184 aagcacagagtatttgaagtcagtttggctgatcttcagaaggatgaggatcaatctttc 243 Query: 320 aggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctgg 379 ||||||||| | | | || || ||||||||||||| |||||||||||||||||||||| Sbjct: 244 aggaagatccgcttgagggcagaagatgtgcaagggaagaatgtcctcacaaacttctgg 303 Query: 380 ggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcatt 439 || ||||||||||| || |||||| | |||||||| || | |||||||||||| | ||| Sbjct: 304 ggaatggatttcacaacagacaagttgaggtctctggtaaagaagtggcagacattgatt 363 Query: 440 gaggctcatgtcgatgt 456 ||||||||||| ||||| Sbjct: 364 gaggctcatgtggatgt 380 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 554 cagatcagacagatccgccggaagatggttgagatcatg 592 |||||| | |||||||| ||||| ||||||||||||||| Sbjct: 478 cagatccgtcagatccgtcggaaaatggttgagatcatg 516 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 125 aagaagaaggccgtggatccgttcaccaagaagcagtggtatgacatcaaggc 177 ||||||||||| | |||||||| | | |||||| | ||||||||||| ||||| Sbjct: 49 aagaagaaggcggcggatccgtacgcaaagaaggactggtatgacataaaggc 101
>emb|BX826401.1|CNS0A38P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZE07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 836 Score = 137 bits (69), Expect = 5e-29 Identities = 201/245 (82%) Strand = Plus / Plus Query: 221 tccaggacacagggtaccaagattgcctcagagggcctgaagcaccgggtgtttgaagta 280 |||||||| |||||||||||||||||||| ||||| ||||| ||| |||||||||| || Sbjct: 52 tccaggactcagggtaccaagattgcctctgagggactgaaacacagggtgtttgaggtt 111 Query: 281 tctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgct 340 ||||| |||||||| || || |||||||| | ||||||||||||||| | || | ||| Sbjct: 112 tctcttgctgatctacaaaatgatgaggataatgcctacaggaagatccgtcttagagct 171 Query: 341 gaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgac 400 || ||||| || || | |||||| | || | |||||||| ||||||||||| || ||| Sbjct: 172 gaagatgttcagggaaggaatgtgttgacccagttctggggtatggatttcacaaccgac 231 Query: 401 aagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaag 460 ||||| ||||| | |||| |||||||||||| | ||||| || |||||||||||||| Sbjct: 232 aagctaaggtcattggtgaagaagtggcagactttgattgaagcccatgtcgatgtgaaa 291 Query: 461 accac 465 ||||| Sbjct: 292 accac 296
>emb|AJ001342.1|ATCYC07 Arabidopsis thaliana mRNA for S-phase-specific ribosomal protein Length = 906 Score = 137 bits (69), Expect = 5e-29 Identities = 201/245 (82%) Strand = Plus / Plus Query: 221 tccaggacacagggtaccaagattgcctcagagggcctgaagcaccgggtgtttgaagta 280 |||||||| |||||||||||||||||||| ||||| ||||| ||| |||||||||| || Sbjct: 145 tccaggactcagggtaccaagattgcctctgagggactgaaacacagggtgtttgaggtt 204 Query: 281 tctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgct 340 ||||| |||||||| || || |||||||| | ||||||||||||||| | || | ||| Sbjct: 205 tctcttgctgatctacaaaatgatgaggataatgcctacaggaagatccgtcttagagct 264 Query: 341 gaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgac 400 || ||||| || || | |||||| | || | |||||||| ||||||||||| || ||| Sbjct: 265 gaagatgttcagggaaggaatgtgttgacccagttctggggtatggatttcacaaccgac 324 Query: 401 aagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaag 460 ||||| ||||| | |||| |||||||||||| | ||||| || |||||||||||||| Sbjct: 325 aagctaaggtcattggtgaagaagtggcagactttgattgaagcccatgtcgatgtgaaa 384 Query: 461 accac 465 ||||| Sbjct: 385 accac 389
>emb|Z25769.1|BRSPSG B.rapa mRNA for S phase specific gene Length = 1050 Score = 131 bits (66), Expect = 3e-27 Identities = 222/274 (81%) Strand = Plus / Plus Query: 203 gtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcagagggcctgaag 262 ||||| ||||| || || ||||| || ||||||||||||||||| |||||||| |||| Sbjct: 232 gtcggaaagacacttgtttccagaactcagggtaccaagattgcatcagagggtttgaaa 291 Query: 263 caccgggtgtttgaagtatctctagctgatcttcagaacgatgaggaccaggcctacagg 322 ||| | || ||||| || ||||| ||||||||| | || |||||||||||||| |||||| Sbjct: 292 cacagagtctttgaggtgtctcttgctgatcttaacaaggatgaggaccaggcttacagg 351 Query: 323 aagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctggggc 382 |||||| | ||| | ||||| ||||| || || | ||||||| | || | |||||||| Sbjct: 352 aagatccgtctcagagctgaagatgtccagggcaggaatgtcttgacccagttctggggt 411 Query: 383 atggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcattgag 442 ||||| ||||| || ||||| |||||||| | || | |||||||||||| | || ||| Sbjct: 412 atggacttcacaaccgacaaactcaggtccttggttaagaagtggcagactttgatcgag 471 Query: 443 gctcatgtcgatgtgaagaccactgacaattaca 476 ||||||| ||||| |||||||||||||| |||| Sbjct: 472 tctcatgttgatgttaagaccactgacaactaca 505 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 72 caaccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaaga 131 |||||||||| ||||| | ||||||| | ||||||||||| || ||||| ||||||||| Sbjct: 101 caaccatggccgtcggtaagaacaagaggatctccaagggaagaaagggaggcaagaaga 160 Query: 132 aggccgtggatccgttcaccaagaagcagtggtatgacatcaaggc 177 || || ||||| ||| |||||||| | |||||||| |||||||| Sbjct: 161 agattgttgatcctttcgccaagaaggattggtatgatatcaaggc 206 Score = 40.1 bits (20), Expect = 8.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 499 cttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctca 546 ||||||||||||||| | ||||| || ||| | |||||||||||||| Sbjct: 528 cttcaccaagagacgtgctaaccaagttaagagaacttgctatgctca 575
>gb|DQ268835.1| Solanum tuberosum clone 115A11 cyc07-like protein mRNA, complete cds Length = 1020 Score = 131 bits (66), Expect = 3e-27 Identities = 195/238 (81%) Strand = Plus / Plus Query: 225 ggacacagggtaccaagattgcctcagagggcctgaagcaccgggtgtttgaagtatctc 284 |||| |||||||| |||||||| ||||| || || |||||| | || |||||||| | Sbjct: 192 ggactcagggtactaagattgcttcagaaggactaaagcacagagtatttgaagtcagtt 251 Query: 285 tagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgctgagg 344 | |||||||||||||| |||||||| ||||| |||||||||||| | | | || || | Sbjct: 252 tggctgatcttcagaaggatgaggatcaggcttacaggaagatccgcttgagagcagaag 311 Query: 345 atgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgacaagc 404 |||||||||||| ||||||||||||||||||| || ||||| ||||| || |||||| Sbjct: 312 atgtgcaagggaggaatgtcctcacaaacttccatggaatggacttcacaacagacaagt 371 Query: 405 tcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaagac 462 | |||||||| ||| | ||||||||||| | |||||||||||||| ||||| ||||| Sbjct: 372 tgaggtctctggtgcgcaagtggcagactttgattgaggctcatgtggatgtcaagac 429
>gb|DQ252490.1| Solanum tuberosum clone 059D09 cyc07-like mRNA, complete cds Length = 996 Score = 131 bits (66), Expect = 3e-27 Identities = 195/238 (81%) Strand = Plus / Plus Query: 225 ggacacagggtaccaagattgcctcagagggcctgaagcaccgggtgtttgaagtatctc 284 |||| |||||||| |||||||| ||||| || || |||||| | || |||||||| | Sbjct: 170 ggactcagggtactaagattgcttcagaaggactaaagcacagagtatttgaagtcagtt 229 Query: 285 tagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgctgagg 344 | |||||||||||||| |||||||| ||||| |||||||||||| | | | || || | Sbjct: 230 tggctgatcttcagaaggatgaggatcaggcttacaggaagatccgcttgagagcagaag 289 Query: 345 atgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgacaagc 404 |||||||||||| ||||||||||||||||||| || ||||| ||||| || |||||| Sbjct: 290 atgtgcaagggaggaatgtcctcacaaacttccatggaatggacttcacaacagacaagt 349 Query: 405 tcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaagac 462 | |||||||| ||| | ||||||||||| | |||||||||||||| ||||| ||||| Sbjct: 350 tgaggtctctggtgcgcaagtggcagactttgattgaggctcatgtggatgtcaagac 407
>gb|L23553.1|BRRSPSK Brassica rapa S-phase-specific (BIS289) mRNA, complete cds Length = 1050 Score = 131 bits (66), Expect = 3e-27 Identities = 222/274 (81%) Strand = Plus / Plus Query: 203 gtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcagagggcctgaag 262 ||||| ||||| || || ||||| || ||||||||||||||||| |||||||| |||| Sbjct: 232 gtcggaaagacacttgtttccagaactcagggtaccaagattgcatcagagggtttgaaa 291 Query: 263 caccgggtgtttgaagtatctctagctgatcttcagaacgatgaggaccaggcctacagg 322 ||| | || ||||| || ||||| ||||||||| | || |||||||||||||| |||||| Sbjct: 292 cacagagtctttgaggtgtctcttgctgatcttaacaaggatgaggaccaggcttacagg 351 Query: 323 aagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctggggc 382 |||||| | ||| | ||||| ||||| || || | ||||||| | || | |||||||| Sbjct: 352 aagatccgtctcagagctgaagatgtccagggcaggaatgtcttgacccagttctggggt 411 Query: 383 atggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcattgag 442 ||||| ||||| || ||||| |||||||| | || | |||||||||||| | || ||| Sbjct: 412 atggacttcacaaccgacaaactcaggtccttggttaagaagtggcagactttgatcgag 471 Query: 443 gctcatgtcgatgtgaagaccactgacaattaca 476 ||||||| ||||| |||||||||||||| |||| Sbjct: 472 tctcatgttgatgttaagaccactgacaactaca 505 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 72 caaccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaaga 131 |||||||||| ||||| | ||||||| | ||||||||||| || ||||| ||||||||| Sbjct: 101 caaccatggccgtcggtaagaacaagaggatctccaagggaagaaagggaggcaagaaga 160 Query: 132 aggccgtggatccgttcaccaagaagcagtggtatgacatcaaggc 177 || || ||||| ||| |||||||| | |||||||| |||||||| Sbjct: 161 agattgttgatcctttcgccaagaaggattggtatgatatcaaggc 206 Score = 40.1 bits (20), Expect = 8.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 499 cttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctca 546 ||||||||||||||| | ||||| || ||| | |||||||||||||| Sbjct: 528 cttcaccaagagacgtgctaaccaagttaagagaacttgctatgctca 575
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 129 bits (65), Expect = 1e-26 Identities = 122/141 (86%) Strand = Plus / Plus Query: 240 agattgcctcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttcaga 299 ||||||| || |||||||| ||||| | |||||||| || || |||||||||| |||| Sbjct: 5244369 agattgcttctgagggcctaaagcatagagtgtttgaggtctccttagctgatctccaga 5244428 Query: 300 acgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatga 359 |||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| || Sbjct: 5244429 acgatgaggatcaggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaaga 5244488 Query: 360 atgtcctcacaaacttctggg 380 | || ||||| ||||| |||| Sbjct: 5244489 acgtgctcaccaacttttggg 5244509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 136/165 (82%) Strand = Plus / Plus Query: 401 aagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaag 460 |||||||| || ||||| | |||||||||||| || |||||||||||||| ||||| || Sbjct: 5244600 aagctcagatcacttgttaagaagtggcagacactgattgaggctcatgtggatgtcaaa 5244659 Query: 461 accactgacaattacatgctccgcatgtttgccattggcttcaccaagagacgcccaaac 520 ||||| ||| |||||||| || |||| || |||||||||||| | || || ||| Sbjct: 5244660 accacagacggctacatgctgcgtctgttctgtatcggcttcaccaagcggcggcctaac 5244719 Query: 521 caggtcaagcgcacttgctatgctcaagcaagtcagatcagacag 565 ||||| ||| | ||||||||||||||||| ||||||||||||||| Sbjct: 5244720 caggtgaagaggacttgctatgctcaagcgagtcagatcagacag 5244764 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 204 tcggcaagaccctcgtgtccaggacacagggtac 237 |||||||||||||||||||||||||||||||||| Sbjct: 5243526 tcggcaagaccctcgtgtccaggacacagggtac 5243559 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 65 gcagcggcaaccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagc 124 |||||| || ||||||| || || | ||||||||||||||||||||||| |||||| | Sbjct: 5243269 gcagcgtcagccatggccgtaggtaagaacaagcgcatctccaaggggaagaagggatcc 5243328 Query: 125 aagaagaag 133 ||||||||| Sbjct: 5243329 aagaagaag 5243337
>gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare strain chromosome 3 clone OSJNBa0021H20, complete sequence Length = 133079 Score = 129 bits (65), Expect = 1e-26 Identities = 122/141 (86%) Strand = Plus / Plus Query: 240 agattgcctcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttcaga 299 ||||||| || |||||||| ||||| | |||||||| || || |||||||||| |||| Sbjct: 67771 agattgcttctgagggcctaaagcatagagtgtttgaggtctccttagctgatctccaga 67830 Query: 300 acgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatga 359 |||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| || Sbjct: 67831 acgatgaggatcaggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaaga 67890 Query: 360 atgtcctcacaaacttctggg 380 | || ||||| ||||| |||| Sbjct: 67891 acgtgctcaccaacttttggg 67911 Score = 97.6 bits (49), Expect = 4e-17 Identities = 136/165 (82%) Strand = Plus / Plus Query: 401 aagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaag 460 |||||||| || ||||| | |||||||||||| || |||||||||||||| ||||| || Sbjct: 68002 aagctcagatcacttgttaagaagtggcagacactgattgaggctcatgtggatgtcaaa 68061 Query: 461 accactgacaattacatgctccgcatgtttgccattggcttcaccaagagacgcccaaac 520 ||||| ||| |||||||| || |||| || |||||||||||| | || || ||| Sbjct: 68062 accacagacggctacatgctgcgtctgttctgtatcggcttcaccaagcggcggcctaac 68121 Query: 521 caggtcaagcgcacttgctatgctcaagcaagtcagatcagacag 565 ||||| ||| | ||||||||||||||||| ||||||||||||||| Sbjct: 68122 caggtgaagaggacttgctatgctcaagcgagtcagatcagacag 68166 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 204 tcggcaagaccctcgtgtccaggacacagggtac 237 |||||||||||||||||||||||||||||||||| Sbjct: 66928 tcggcaagaccctcgtgtccaggacacagggtac 66961 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 65 gcagcggcaaccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagc 124 |||||| || ||||||| || || | ||||||||||||||||||||||| |||||| | Sbjct: 66671 gcagcgtcagccatggccgtaggtaagaacaagcgcatctccaaggggaagaagggatcc 66730 Query: 125 aagaagaag 133 ||||||||| Sbjct: 66731 aagaagaag 66739
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 129 bits (65), Expect = 1e-26 Identities = 122/141 (86%) Strand = Plus / Minus Query: 240 agattgcctcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttcaga 299 ||||||| || |||||||| ||||| | |||||||| || || |||||||||| |||| Sbjct: 12149 agattgcttctgagggcctaaagcatagagtgtttgaggtctccttagctgatctccaga 12090 Query: 300 acgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatga 359 |||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| || Sbjct: 12089 acgatgaggatcaggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaaga 12030 Query: 360 atgtcctcacaaacttctggg 380 | || ||||| ||||| |||| Sbjct: 12029 acgtgctcaccaacttttggg 12009 Score = 97.6 bits (49), Expect = 4e-17 Identities = 136/165 (82%) Strand = Plus / Minus Query: 401 aagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaag 460 |||||||| || ||||| | |||||||||||| || |||||||||||||| ||||| || Sbjct: 11918 aagctcagatcacttgttaagaagtggcagacactgattgaggctcatgtggatgtcaaa 11859 Query: 461 accactgacaattacatgctccgcatgtttgccattggcttcaccaagagacgcccaaac 520 ||||| ||| |||||||| || |||| || |||||||||||| | || || ||| Sbjct: 11858 accacagacggctacatgctgcgtctgttctgtatcggcttcaccaagcggcggcctaac 11799 Query: 521 caggtcaagcgcacttgctatgctcaagcaagtcagatcagacag 565 ||||| ||| | ||||||||||||||||| ||||||||||||||| Sbjct: 11798 caggtgaagaggacttgctatgctcaagcgagtcagatcagacag 11754 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 204 tcggcaagaccctcgtgtccaggacacagggtac 237 |||||||||||||||||||||||||||||||||| Sbjct: 12992 tcggcaagaccctcgtgtccaggacacagggtac 12959 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 65 gcagcggcaaccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagc 124 |||||| || ||||||| || || | ||||||||||||||||||||||| |||||| | Sbjct: 13249 gcagcgtcagccatggccgtaggtaagaacaagcgcatctccaaggggaagaagggatcc 13190 Query: 125 aagaagaag 133 ||||||||| Sbjct: 13189 aagaagaag 13181
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 129 bits (65), Expect = 1e-26 Identities = 122/141 (86%) Strand = Plus / Minus Query: 240 agattgcctcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttcaga 299 ||||||| ||||||||||| |||||||| |||||||| || || | ||||||||||||| Sbjct: 12316009 agattgcttcagagggcctcaagcaccgtgtgtttgaggtctccttggctgatcttcaga 12315950 Query: 300 acgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatga 359 |||||||||| ||||| ||| | ||||||||||| ||||| ||||||||||| |||| | Sbjct: 12315949 acgatgaggatcaggcgtaccgtaagatcagactacgtgccgaggatgtgcaggggaaaa 12315890 Query: 360 atgtcctcacaaacttctggg 380 |||| || ||||||||||||| Sbjct: 12315889 atgttcttacaaacttctggg 12315869 Score = 87.7 bits (44), Expect = 4e-14 Identities = 146/180 (81%) Strand = Plus / Minus Query: 379 gggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcat 438 ||||||| |||||| || ||||||||||| || | || | ||| |||||||| || || Sbjct: 12315798 gggcatgagtttcacgaccgacaagctcagatcattggtcaagaaatggcagacgctaat 12315739 Query: 439 tgaggctcatgtcgatgtgaagaccactgacaattacatgctccgcatgtttgccattgg 498 ||||||||||| ||||| ||||||||||| || |||||||| || | || |||||| Sbjct: 12315738 agaggctcatgtggatgtaaagaccactgataactacatgctgcgtctcttctgcattgg 12315679 Query: 499 cttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctcaagcaagtcagat 558 |||||||||||| | ||||| || ||||| || || ||||||||||||||||| ||||| Sbjct: 12315678 cttcaccaagaggaggccaaatcaagtcaaacggacatgctatgctcaagcaagccagat 12315619 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 200 aacgtcggcaagaccctcgtgtccaggacacaggg 234 |||||||| ||||| |||||||||||||||||||| Sbjct: 12318352 aacgtcgggaagacgctcgtgtccaggacacaggg 12318318 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 563 cagatccgccggaagatggttgagatcatggtcaacca 600 |||||||| || |||||||| ||||||||||| ||||| Sbjct: 12315503 cagatccgtcgcaagatggtggagatcatggtgaacca 12315466 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 ctccacccgccgcagcgccgccac 57 ||||||||||||| |||||||||| Sbjct: 18425138 ctccacccgccgccgcgccgccac 18425115
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 129 bits (65), Expect = 1e-26 Identities = 122/141 (86%) Strand = Plus / Plus Query: 240 agattgcctcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttcaga 299 ||||||| || |||||||| ||||| | |||||||| || || |||||||||| |||| Sbjct: 5243584 agattgcttctgagggcctaaagcatagagtgtttgaggtctccttagctgatctccaga 5243643 Query: 300 acgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatga 359 |||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| || Sbjct: 5243644 acgatgaggatcaggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaaga 5243703 Query: 360 atgtcctcacaaacttctggg 380 | || ||||| ||||| |||| Sbjct: 5243704 acgtgctcaccaacttttggg 5243724 Score = 97.6 bits (49), Expect = 4e-17 Identities = 136/165 (82%) Strand = Plus / Plus Query: 401 aagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaag 460 |||||||| || ||||| | |||||||||||| || |||||||||||||| ||||| || Sbjct: 5243815 aagctcagatcacttgttaagaagtggcagacactgattgaggctcatgtggatgtcaaa 5243874 Query: 461 accactgacaattacatgctccgcatgtttgccattggcttcaccaagagacgcccaaac 520 ||||| ||| |||||||| || |||| || |||||||||||| | || || ||| Sbjct: 5243875 accacagacggctacatgctgcgtctgttctgtatcggcttcaccaagcggcggcctaac 5243934 Query: 521 caggtcaagcgcacttgctatgctcaagcaagtcagatcagacag 565 ||||| ||| | ||||||||||||||||| ||||||||||||||| Sbjct: 5243935 caggtgaagaggacttgctatgctcaagcgagtcagatcagacag 5243979 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 204 tcggcaagaccctcgtgtccaggacacagggtac 237 |||||||||||||||||||||||||||||||||| Sbjct: 5242741 tcggcaagaccctcgtgtccaggacacagggtac 5242774 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 65 gcagcggcaaccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagc 124 |||||| || ||||||| || || | ||||||||||||||||||||||| |||||| | Sbjct: 5242484 gcagcgtcagccatggccgtaggtaagaacaagcgcatctccaaggggaagaagggatcc 5242543 Query: 125 aagaagaag 133 ||||||||| Sbjct: 5242544 aagaagaag 5242552
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 129 bits (65), Expect = 1e-26 Identities = 122/141 (86%) Strand = Plus / Minus Query: 240 agattgcctcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttcaga 299 ||||||| ||||||||||| |||||||| |||||||| || || | ||||||||||||| Sbjct: 12270379 agattgcttcagagggcctcaagcaccgtgtgtttgaggtctccttggctgatcttcaga 12270320 Query: 300 acgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatga 359 |||||||||| ||||| ||| | ||||||||||| ||||| ||||||||||| |||| | Sbjct: 12270319 acgatgaggatcaggcgtaccgtaagatcagactacgtgccgaggatgtgcaggggaaaa 12270260 Query: 360 atgtcctcacaaacttctggg 380 |||| || ||||||||||||| Sbjct: 12270259 atgttcttacaaacttctggg 12270239 Score = 87.7 bits (44), Expect = 4e-14 Identities = 146/180 (81%) Strand = Plus / Minus Query: 379 gggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcat 438 ||||||| |||||| || ||||||||||| || | || | ||| |||||||| || || Sbjct: 12270168 gggcatgagtttcacgaccgacaagctcagatcattggtcaagaaatggcagacgctaat 12270109 Query: 439 tgaggctcatgtcgatgtgaagaccactgacaattacatgctccgcatgtttgccattgg 498 ||||||||||| ||||| ||||||||||| || |||||||| || | || |||||| Sbjct: 12270108 agaggctcatgtggatgtaaagaccactgataactacatgctgcgtctcttctgcattgg 12270049 Query: 499 cttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctcaagcaagtcagat 558 |||||||||||| | ||||| || ||||| || || ||||||||||||||||| ||||| Sbjct: 12270048 cttcaccaagaggaggccaaatcaagtcaaacggacatgctatgctcaagcaagccagat 12269989 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 200 aacgtcggcaagaccctcgtgtccaggacacaggg 234 |||||||| ||||| |||||||||||||||||||| Sbjct: 12272722 aacgtcgggaagacgctcgtgtccaggacacaggg 12272688 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 563 cagatccgccggaagatggttgagatcatggtcaacca 600 |||||||| || |||||||| ||||||||||| ||||| Sbjct: 12269873 cagatccgtcgcaagatggtggagatcatggtgaacca 12269836 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 ctccacccgccgcagcgccgccac 57 ||||||||||||| |||||||||| Sbjct: 18351364 ctccacccgccgccgcgccgccac 18351341
>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163702 Score = 129 bits (65), Expect = 1e-26 Identities = 122/141 (86%) Strand = Plus / Minus Query: 240 agattgcctcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttcaga 299 ||||||| ||||||||||| |||||||| |||||||| || || | ||||||||||||| Sbjct: 30374 agattgcttcagagggcctcaagcaccgtgtgtttgaggtctccttggctgatcttcaga 30315 Query: 300 acgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatga 359 |||||||||| ||||| ||| | ||||||||||| ||||| ||||||||||| |||| | Sbjct: 30314 acgatgaggatcaggcgtaccgtaagatcagactacgtgccgaggatgtgcaggggaaaa 30255 Query: 360 atgtcctcacaaacttctggg 380 |||| || ||||||||||||| Sbjct: 30254 atgttcttacaaacttctggg 30234 Score = 87.7 bits (44), Expect = 4e-14 Identities = 146/180 (81%) Strand = Plus / Minus Query: 379 gggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcat 438 ||||||| |||||| || ||||||||||| || | || | ||| |||||||| || || Sbjct: 30163 gggcatgagtttcacgaccgacaagctcagatcattggtcaagaaatggcagacgctaat 30104 Query: 439 tgaggctcatgtcgatgtgaagaccactgacaattacatgctccgcatgtttgccattgg 498 ||||||||||| ||||| ||||||||||| || |||||||| || | || |||||| Sbjct: 30103 agaggctcatgtggatgtaaagaccactgataactacatgctgcgtctcttctgcattgg 30044 Query: 499 cttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctcaagcaagtcagat 558 |||||||||||| | ||||| || ||||| || || ||||||||||||||||| ||||| Sbjct: 30043 cttcaccaagaggaggccaaatcaagtcaaacggacatgctatgctcaagcaagccagat 29984 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 200 aacgtcggcaagaccctcgtgtccaggacacaggg 234 |||||||| ||||| |||||||||||||||||||| Sbjct: 32717 aacgtcgggaagacgctcgtgtccaggacacaggg 32683 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 563 cagatccgccggaagatggttgagatcatggtcaacca 600 |||||||| || |||||||| ||||||||||| ||||| Sbjct: 29868 cagatccgtcgcaagatggtggagatcatggtgaacca 29831
>gb|AF479043.1| Triticum aestivum 40S ribosomal protein mRNA, partial cds Length = 342 Score = 127 bits (64), Expect = 5e-26 Identities = 70/72 (97%) Strand = Plus / Plus Query: 529 gcgcacttgctatgctcaagcaagtcagatcagacagatccgccggaagatggttgagat 588 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 3 gcgcacttgctatgcccaagcaagtcagatcagacagatccgccgcaagatggttgagat 62 Query: 589 catggtcaacca 600 |||||||||||| Sbjct: 63 catggtcaacca 74
>emb|AJ515028.1|CAR515028 Cicer arietinum mRNA for ribosomal protein S3a (rs3a gene) Length = 1026 Score = 125 bits (63), Expect = 2e-25 Identities = 198/243 (81%) Strand = Plus / Plus Query: 358 gaatgtcctcacaaacttctggggcatggatttcaccactgacaagctcaggtctcttgt 417 |||||||||||| ||||| | || |||||||||||||||||||||||||||||| | || Sbjct: 332 gaatgtcctcaccaacttttatggtatggatttcaccactgacaagctcaggtctttggt 391 Query: 418 gaggaagtggcagaccctcattgaggctcatgtcgatgtgaagaccactgacaattacat 477 | || ||||| || |||||||| |||||||| ||||| ||||||||||| ||||| | Sbjct: 392 ccgtaaatggcaaactctcattgaagctcatgtggatgttaagaccactgataattatac 451 Query: 478 gctccgcatgtttgccattggcttcaccaagagacgcccaaaccaggtcaagcgcacttg 537 | | ||||| ||||||||| |||||||||||| ||||| || ||| | || || Sbjct: 452 cttgagaatgttctgcattggctttaccaagagacgcagtaaccaagtgaagagaacctg 511 Query: 538 ctatgctcaagcaagtcagatcagacagatccgccggaagatggttgagatcatggtcaa 597 ||||||||| | || |||||||||||||||||| |||||||| ||||||||||| || Sbjct: 512 ttatgctcaatccagccagatcagacagatccgcaggaagatgagggagatcatggttaa 571 Query: 598 cca 600 ||| Sbjct: 572 cca 574 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 72 caaccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaaga 131 |||||||||||||||||| ||||||| | || |||||||| | |||||| ||||||||| Sbjct: 46 caaccatggcggtcggcaagaacaagagaatttccaagggaaagaagggaggcaagaaga 105 Query: 132 aggccgtggatccgttcaccaagaagcagtggtatgacatcaaggc 177 | |||| ||||| || |||||||| | |||||||| |||||||| Sbjct: 106 aagccgccgatcccttttccaagaaggattggtatgatatcaaggc 151
>gb|DQ445133.1| Striga asiatica isolate St513 S phase protein mRNA, partial cds Length = 571 Score = 123 bits (62), Expect = 7e-25 Identities = 143/170 (84%) Strand = Plus / Plus Query: 302 gatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatgaat 361 ||||||||||| ||| |||||||||| | | | ||||| ||||| || || | |||| Sbjct: 67 gatgaggaccactccttcaggaagatccgtttgagagctgaagatgttcagggaaagaat 126 Query: 362 gtcctcacaaacttctggggcatggatttcaccactgacaagctcaggtctcttgtgagg 421 || |||||||||||||||||||||||||||||||| |||||||| || ||||| |||||| Sbjct: 127 gttctcacaaacttctggggcatggatttcaccaccgacaagctgagatctctcgtgagg 186 Query: 422 aagtggcagaccctcattgaggctcatgtcgatgtgaagaccactgacaa 471 || |||||| | || |||||||||||||| ||||| ||||| || ||||| Sbjct: 187 aaatggcagtcactaattgaggctcatgttgatgtcaagactaccgacaa 236
>dbj|AB029635.1| Daucus carota mRNA for cyc07, complete cds Length = 1050 Score = 119 bits (60), Expect = 1e-23 Identities = 282/356 (79%) Strand = Plus / Plus Query: 230 cagggtaccaagattgcctcagagggcctgaagcaccgggtgtttgaagtatctctagct 289 ||||||||||||||||| || || || || || ||||| ||||| || || | || ||| Sbjct: 175 cagggtaccaagattgcttctgaaggactcaaacaccgagtgttcgaggtttgccttgct 234 Query: 290 gatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtg 349 || |||||| |||||||||||||| || |||||||| | || | || ||||||||| Sbjct: 235 gaccttcagggagatgaggaccaggcttataggaagattcgcctgagagcagaggatgtg 294 Query: 350 caagggatgaatgtcctcacaaacttctggggcatggatttcaccactgacaagctcagg 409 ||||||| |||||| || |||||||||| || ||||| ||||| ||||||||| | ||| Sbjct: 295 caagggaagaatgtgcttacaaacttctatggaatggacttcacaactgacaagttgagg 354 Query: 410 tctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaagaccactgac 469 ||||| || | ||||||||||| || ||||| |||||||| ||||||||||| ||||| Sbjct: 355 tctctggtacgcaagtggcagacactgattgaagctcatgtagatgtgaagacaactgat 414 Query: 470 aattacatgctccgcatgtttgccattggcttcaccaagagacgcccaaaccaggtcaag 529 | ||| | || || |||||| |||||| || ||||||| ||| |||| ||| ||| Sbjct: 415 agttatactctgcgaatgttttgcattggatttaccaagaaacgtgcaaatcagcagaag 474 Query: 530 cgcacttgctatgctcaagcaagtcagatcagacagatccgccggaagatggttga 585 | || |||||||| ||| | || |||||| | ||||| ||||| ||||||||||| Sbjct: 475 agaacctgctatgcccaatctagccagatccggcagattcgccgtaagatggttga 530 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 71 gcaaccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaag 130 ||||||||||| ||||||| ||||||| | ||||| ||||| | |||||| |||||||| Sbjct: 16 gcaaccatggctgtcggcaagaacaagaggatctcgaagggaaagaagggaggcaagaag 75 Query: 131 aaggc 135 ||||| Sbjct: 76 aaggc 80
>gb|DQ241862.1| Solanum tuberosum clone 027B03 40S ribosomal protein S3a-like mRNA, complete cds Length = 1118 Score = 117 bits (59), Expect = 4e-23 Identities = 212/263 (80%) Strand = Plus / Plus Query: 200 aacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcagagggcctg 259 ||||||||||| ||||| || ||||||| ||||||||||||||||| ||||||||||| Sbjct: 210 aacgtcggcaaaacccttgttaccaggactcagggtaccaagattgcttcagagggccta 269 Query: 260 aagcaccgggtgtttgaagtatctctagctgatcttcagaacgatgaggaccaggcctac 319 || ||| | || |||||||| || |||||||||||||| |||||||| ||||| | | Sbjct: 270 aaacacagagtatttgaagttagcctggctgatcttcagaaggatgaggatcaggctttc 329 Query: 320 aggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctgg 379 ||||| ||| | | | || || ||||||||||||| |||||| |||||||||||| Sbjct: 330 aggaaaatccgtttgagagcagaagatgtgcaagggaggaatgttctcacaaacttccat 389 Query: 380 ggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcatt 439 || ||||||||||| || || ||| | |||||||| || | || |||||||| | ||| Sbjct: 390 ggaatggatttcacaacagataagttgaggtctctggtccgcaaatggcagactttgatt 449 Query: 440 gaggctcatgtcgatgtgaagac 462 ||||| ||||| ||||| ||||| Sbjct: 450 gaggcccatgttgatgtcaagac 472 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 563 cagatccgccggaagatggttgagat 588 ||||||||| |||||||||||||||| Sbjct: 573 cagatccgcaggaagatggttgagat 598 Score = 44.1 bits (22), Expect = 0.52 Identities = 82/102 (80%) Strand = Plus / Plus Query: 76 catggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaaggc 135 |||||| ||||||| ||||||| | || |||||||| | |||||| | ||||||||||| Sbjct: 86 catggccgtcggcaagaacaagaggatttccaagggaaagaagggaggaaagaagaaggc 145 Query: 136 cgtggatccgttcaccaagaagcagtggtatgacatcaaggc 177 | |||||| | | |||||| | ||||| ||||||||||| Sbjct: 146 ggcggatccttatgcaaagaaggactggtacgacatcaaggc 187
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 113 bits (57), Expect = 7e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 427 gcagaccctcattgaggctcatgtcgatgtgaagaccactgacaattacatgctccgcat 486 ||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 3401 gcagaccctcattgaggctcatgcagatgtcaagacaactgacaactacatgctccgcat 3460 Query: 487 gtttgccattggcttcaccaagagacgcc 515 |||| ||| |||||||||||||| ||||| Sbjct: 3461 gtttcccactggcttcaccaagaaacgcc 3489
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 111 bits (56), Expect = 3e-21 Identities = 80/88 (90%) Strand = Plus / Minus Query: 428 cagaccctcattgaggctcatgtcgatgtgaagaccactgacaattacatgctccgcatg 487 |||||||||| ||||||||||| ||||| ||||| ||||||||||||||||| |||||| Sbjct: 128530 cagaccctcagtgaggctcatgcagatgtcaagacaactgacaattacatgcttcgcatg 128471 Query: 488 tttgccattggcttcaccaagagacgcc 515 ||||||||||||||||| |||| ||||| Sbjct: 128470 tttgccattggcttcacaaagaaacgcc 128443 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 427 gcagaccctcattgaggctcatgtcgatgtgaagaccactgacaattacatg 478 ||||| |||||||||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 128702 gcagaacctcattgaggctcatgtagatgtcaagacaactgacaattacatg 128651 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 427 gcagaccctcattgaggctcatgtcgatgtgaagaccactgacaattacatg 478 |||||||| |||||| |||||||| ||||| ||||| ||||||||||||||| Sbjct: 128814 gcagacccacattgaagctcatgtagatgtcaagacaactgacaattacatg 128763 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 427 gcagaccctcattgaggctcatgtcgatgtgaagaccactgacaattacatg 478 ||||| |||||||||| ||||||| ||||| ||||| ||||||||||||||| Sbjct: 128758 gcagaacctcattgagactcatgtagatgtcaagacaactgacaattacatg 128707
>gb|AF093109.1| Tortula ruralis ribosomal protein S3 (rps3) mRNA, complete cds Length = 899 Score = 105 bits (53), Expect = 2e-19 Identities = 143/173 (82%) Strand = Plus / Plus Query: 296 cagaacgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaaggg 355 |||||||||||||||||||| | | | ||||||| || | || ||||||||||| || Sbjct: 238 cagaacgatgaggaccaggctttccgcaagatcaagctgagggcggaggatgtgcagggc 297 Query: 356 atgaatgtcctcacaaacttctggggcatggatttcaccactgacaagctcaggtctctt 415 | ||| || ||||| ||||||||||||||||| |||||||| |||||||| ||||||| Sbjct: 298 aagaacgtgctcaccaacttctggggcatggacttcaccacggacaagctgcggtctctg 357 Query: 416 gtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaagaccactga 468 ||| | |||||||||| | || ||||||| |||||||||||||||||||| Sbjct: 358 gtgcgcaagtggcagagtttgatccaggctcacgtcgatgtgaagaccactga 410 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 95 aagcgcatctccaaggggaggaagggtagcaagaagaaggccgtggatccgttcaccaag 154 |||||||| |||||||| | |||||| |||||||||| || ||||||||| ||||| Sbjct: 40 aagcgcatttccaagggcaagaagggcggcaagaagaaaattgtcgatccgttctccaag 99 Query: 155 aagcagtggtatgacatcaaggcgcc 180 ||| | |||||||||||||||||||| Sbjct: 100 aaggactggtatgacatcaaggcgcc 125
>gb|DQ268856.1| Solanum tuberosum clone 174A02 cyc07-like protein mRNA, complete cds Length = 1045 Score = 93.7 bits (47), Expect = 6e-16 Identities = 209/263 (79%) Strand = Plus / Plus Query: 200 aacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcagagggcctg 259 ||||||||||| ||||| || ||||||| ||||||||||||||||| ||||| ||||| Sbjct: 197 aacgtcggcaaaacccttgttaccaggactcagggtaccaagattgcttcagatggccta 256 Query: 260 aagcaccgggtgtttgaagtatctctagctgatcttcagaacgatgaggaccaggcctac 319 || ||| | || |||||||| || |||||||||||||| |||||||| ||||| | | Sbjct: 257 aaacacagagtatttgaagttagcctggctgatcttcagaaggatgaggatcaggctttc 316 Query: 320 aggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctgg 379 ||||| ||| | | | || || ||||||||||||| ||||| |||||||| ||| Sbjct: 317 aggaaaatccgtttgagagcagaagatgtgcaagggagaaatgttctcacaaatttccat 376 Query: 380 ggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcatt 439 || ||||||||||| || || ||| | |||||||| || | || |||||||| | ||| Sbjct: 377 ggaatggatttcacaacagataagttgaggtctctggtccgcaaatggcagactttgatt 436 Query: 440 gaggctcatgtcgatgtgaagac 462 ||||| ||||| ||||| ||||| Sbjct: 437 gaggcccatgttgatgtaaagac 459 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 76 catggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaaggc 135 |||||| ||||||| ||||||| | || |||||||| | |||||| | ||||||||||| Sbjct: 73 catggccgtcggcaagaacaagaggatttccaagggaaagaagggaggaaagaagaaggc 132 Query: 136 cgtggatccgttcaccaagaagcagtggtatgacatcaaggc 177 | |||||| | | | |||||| | ||||| ||||||||||| Sbjct: 133 ggcggatccttacgcaaagaaggactggtacgacatcaaggc 174 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 563 cagatccgccggaagatggttgagat 588 ||||||||| |||||||||||||||| Sbjct: 560 cagatccgcaggaagatggttgagat 585
>gb|DQ268849.1| Solanum tuberosum clone 155F06 cyc07-like protein mRNA, complete cds Length = 1038 Score = 93.7 bits (47), Expect = 6e-16 Identities = 209/263 (79%) Strand = Plus / Plus Query: 200 aacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcagagggcctg 259 ||||||||||| ||||| || ||||||| ||||||||||||||||| ||||| ||||| Sbjct: 181 aacgtcggcaaaacccttgttaccaggactcagggtaccaagattgcttcagatggccta 240 Query: 260 aagcaccgggtgtttgaagtatctctagctgatcttcagaacgatgaggaccaggcctac 319 || ||| | || |||||||| || |||||||||||||| |||||||| ||||| | | Sbjct: 241 aaacacagagtatttgaagttagcctggctgatcttcagaaggatgaggatcaggctttc 300 Query: 320 aggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctgg 379 ||||| ||| | | | || || ||||||||||||| ||||| |||||||| ||| Sbjct: 301 aggaaaatccgtttgagagcagaagatgtgcaagggagaaatgttctcacaaatttccat 360 Query: 380 ggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcatt 439 || ||||||||||| || || ||| | |||||||| || | || |||||||| | ||| Sbjct: 361 ggaatggatttcacaacagataagttgaggtctctggtccgcaaatggcagactttgatt 420 Query: 440 gaggctcatgtcgatgtgaagac 462 ||||| ||||| ||||| ||||| Sbjct: 421 gaggcccatgttgatgtaaagac 443 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 563 cagatccgccggaagatggttgagat 588 ||||||||| |||||||||||||||| Sbjct: 544 cagatccgcaggaagatggttgagat 569
>gb|DQ252485.1| Solanum tuberosum clone 048H05 cyc07-like mRNA, complete cds Length = 998 Score = 93.7 bits (47), Expect = 6e-16 Identities = 209/263 (79%) Strand = Plus / Plus Query: 200 aacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcagagggcctg 259 ||||||||||| ||||| || ||||||| ||||||||||||||||| ||||| ||||| Sbjct: 157 aacgtcggcaaaacccttgttaccaggactcagggtaccaagattgcttcagatggccta 216 Query: 260 aagcaccgggtgtttgaagtatctctagctgatcttcagaacgatgaggaccaggcctac 319 || ||| | || |||||||| || |||||||||||||| |||||||| ||||| | | Sbjct: 217 aaacacagagtatttgaagttagcctggctgatcttcagaaggatgaggatcaggctttc 276 Query: 320 aggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaacttctgg 379 ||||| ||| | | | || || ||||||||||||| ||||| |||||||| ||| Sbjct: 277 aggaaaatccgtttgagagcagaagatgtgcaagggagaaatgttctcacaaatttccat 336 Query: 380 ggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcatt 439 || ||||||||||| || || ||| | |||||||| || | || |||||||| | ||| Sbjct: 337 ggaatggatttcacaacagataagttgaggtctctggtccgcaaatggcagactttgatt 396 Query: 440 gaggctcatgtcgatgtgaagac 462 ||||| ||||| ||||| ||||| Sbjct: 397 gaggcccatgttgatgtaaagac 419 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 76 catggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaaggc 135 |||||| ||||||| ||||||| | || |||||||| | |||||| | ||||||||||| Sbjct: 33 catggccgtcggcaagaacaagaggatttccaagggaaagaagggaggaaagaagaaggc 92 Query: 136 cgtggatccgttcaccaagaagcagtggtatgacatcaaggc 177 | |||||| | | | |||||| | ||||| ||||||||||| Sbjct: 93 ggcggatccttacgcaaagaaggactggtacgacatcaaggc 134 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 563 cagatccgccggaagatggttgagat 588 ||||||||| |||||||||||||||| Sbjct: 520 cagatccgcaggaagatggttgagat 545
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 89.7 bits (45), Expect = 1e-14 Identities = 117/141 (82%) Strand = Plus / Minus Query: 240 agattgcctcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttcaga 299 ||||||| || ||||| || ||||| || || |||||||| || | || |||||||||| Sbjct: 10823785 agattgcatctgagggtctcaagcatcgtgtctttgaagtctccttggcggatcttcaga 10823726 Query: 300 acgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatga 359 | || ||||| ||||| ||||||||| | ||||| |||||||||||||| || |||| || Sbjct: 10823725 atgacgaggatcaggcttacaggaaggttagacttcgtgctgaggatgttcaggggagga 10823666 Query: 360 atgtcctcacaaacttctggg 380 |||||||||| || ||||||| Sbjct: 10823665 atgtcctcacgaatttctggg 10823645 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 437 attgaggctcatgtcgatgtgaagaccactgacaattacatgctccgcatgtttgccatt 496 ||||| || ||||| ||||| |||||||| || || |||||||||||| ||||| |||| Sbjct: 10823493 attgaagcccatgtggatgttaagaccacagataactacatgctccgcctgttttgcatt 10823434 Query: 497 ggcttcaccaagagacgcccaaaccaggtcaagcg 531 || ||||||||| | |||||||| ||||| ||||| Sbjct: 10823433 ggtttcaccaagcgccgcccaaatcaggtgaagcg 10823399 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 564 agatccgccggaagatggttgagatcatggtcaacca 600 |||||||||||||||||||||||||||||| |||||| Sbjct: 10823258 agatccgccggaagatggttgagatcatggccaacca 10823222 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 150 ccaagaagcagtggtatgacatcaaggcgccgctgctcttcaccagccgcaacgtcggca 209 |||||||| | ||||| ||||||||||||||| | ||| || ||||||| |||||| Sbjct: 10824487 ccaagaaggattggtacgacatcaaggcgccgaccgtgttctccgtccgcaacatcggca 10824428 Query: 210 agaccctcgtgtccaggacacagggtaccaag 241 |||||||||| |||||||| ||||| |||||| Sbjct: 10824427 agaccctcgtctccaggacccaggggaccaag 10824396 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 75 ccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaag 133 ||||||| || |||| ||||||| | ||||||||||| |||||||| |||||||||||| Sbjct: 10824694 ccatggccgtgggcaagaacaagaggatctccaagggcaggaagggcagcaagaagaag 10824636
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 89.7 bits (45), Expect = 1e-14 Identities = 117/141 (82%) Strand = Plus / Minus Query: 240 agattgcctcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttcaga 299 ||||||| || ||||| || ||||| || || |||||||| || | || |||||||||| Sbjct: 29984 agattgcatctgagggtctcaagcatcgtgtctttgaagtctccttggcggatcttcaga 29925 Query: 300 acgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatga 359 | || ||||| ||||| ||||||||| | ||||| |||||||||||||| || |||| || Sbjct: 29924 atgacgaggatcaggcttacaggaaggttagacttcgtgctgaggatgttcaggggagga 29865 Query: 360 atgtcctcacaaacttctggg 380 |||||||||| || ||||||| Sbjct: 29864 atgtcctcacgaatttctggg 29844 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 437 attgaggctcatgtcgatgtgaagaccactgacaattacatgctccgcatgtttgccatt 496 ||||| || ||||| ||||| |||||||| || || |||||||||||| ||||| |||| Sbjct: 29692 attgaagcccatgtggatgttaagaccacagataactacatgctccgcctgttttgcatt 29633 Query: 497 ggcttcaccaagagacgcccaaaccaggtcaagcg 531 || ||||||||| | |||||||| ||||| ||||| Sbjct: 29632 ggtttcaccaagcgccgcccaaatcaggtgaagcg 29598 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 564 agatccgccggaagatggttgagatcatggtcaacca 600 |||||||||||||||||||||||||||||| |||||| Sbjct: 29457 agatccgccggaagatggttgagatcatggccaacca 29421 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 150 ccaagaagcagtggtatgacatcaaggcgccgctgctcttcaccagccgcaacgtcggca 209 |||||||| | ||||| ||||||||||||||| | ||| || ||||||| |||||| Sbjct: 30686 ccaagaaggattggtacgacatcaaggcgccgaccgtgttctccgtccgcaacatcggca 30627 Query: 210 agaccctcgtgtccaggacacagggtaccaag 241 |||||||||| |||||||| ||||| |||||| Sbjct: 30626 agaccctcgtctccaggacccaggggaccaag 30595 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 75 ccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaag 133 ||||||| || |||| ||||||| | ||||||||||| |||||||| |||||||||||| Sbjct: 30893 ccatggccgtgggcaagaacaagaggatctccaagggcaggaagggcagcaagaagaag 30835
>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_D03 Length = 169378 Score = 89.7 bits (45), Expect = 1e-14 Identities = 117/141 (82%) Strand = Plus / Minus Query: 240 agattgcctcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttcaga 299 ||||||| || ||||| || ||||| || || |||||||| || | || |||||||||| Sbjct: 163266 agattgcatctgagggtctcaagcatcgtgtctttgaagtctccttggcggatcttcaga 163207 Query: 300 acgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtgcaagggatga 359 | || ||||| ||||| ||||||||| | ||||| |||||||||||||| || |||| || Sbjct: 163206 atgacgaggatcaggcttacaggaaggttagacttcgtgctgaggatgttcaggggagga 163147 Query: 360 atgtcctcacaaacttctggg 380 |||||||||| || ||||||| Sbjct: 163146 atgtcctcacgaatttctggg 163126 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 437 attgaggctcatgtcgatgtgaagaccactgacaattacatgctccgcatgtttgccatt 496 ||||| || ||||| ||||| |||||||| || || |||||||||||| ||||| |||| Sbjct: 162974 attgaagcccatgtggatgttaagaccacagataactacatgctccgcctgttttgcatt 162915 Query: 497 ggcttcaccaagagacgcccaaaccaggtcaagcg 531 || ||||||||| | |||||||| ||||| ||||| Sbjct: 162914 ggtttcaccaagcgccgcccaaatcaggtgaagcg 162880 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 564 agatccgccggaagatggttgagatcatggtcaacca 600 |||||||||||||||||||||||||||||| |||||| Sbjct: 162739 agatccgccggaagatggttgagatcatggccaacca 162703 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 150 ccaagaagcagtggtatgacatcaaggcgccgctgctcttcaccagccgcaacgtcggca 209 |||||||| | ||||| ||||||||||||||| | ||| || ||||||| |||||| Sbjct: 163968 ccaagaaggattggtacgacatcaaggcgccgaccgtgttctccgtccgcaacatcggca 163909 Query: 210 agaccctcgtgtccaggacacagggtaccaag 241 |||||||||| |||||||| ||||| |||||| Sbjct: 163908 agaccctcgtctccaggacccaggggaccaag 163877 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 75 ccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaag 133 ||||||| || |||| ||||||| | ||||||||||| |||||||| |||||||||||| Sbjct: 164175 ccatggccgtgggcaagaacaagaggatctccaagggcaggaagggcagcaagaagaag 164117
>dbj|AB023436.1| Hordeum vulgare DNA, down stream region of HvNAS1 gene Length = 10603 Score = 83.8 bits (42), Expect = 6e-13 Identities = 67/74 (90%), Gaps = 1/74 (1%) Strand = Plus / Minus Query: 427 gcagaccctcattgaggctcatgtcgatgtgaagaccactgacaattacatgctccgcat 486 ||||||||||| ||||||||||| ||||| ||||| |||||||||| ||||||| |||| Sbjct: 4956 gcagaccctcagtgaggctcatgcagatgtcaagacaactgacaatt-catgctctgcat 4898 Query: 487 gtttgccattggct 500 |||||||||||||| Sbjct: 4897 gtttgccattggct 4884 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 427 gcagaccctcattgaggctcatgtcgatgtgaagaccactgacaattacatg 478 ||||| |||||||||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 5127 gcagaacctcattgaggctcatgtagatgtcaagacaactgacaattacatg 5076 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 427 gcagaccctcattgaggctcatgtcgatgtgaagaccactgacaattacatg 478 |||||||||||||||| ||||||| ||||| ||||| |||||||| |||||| Sbjct: 5183 gcagaccctcattgagcctcatgtagatgtcaagacaactgacaaatacatg 5132
>gb|AC146852.15| Medicago truncatula clone mth2-58k21, complete sequence Length = 145314 Score = 81.8 bits (41), Expect = 2e-12 Identities = 140/173 (80%) Strand = Plus / Plus Query: 383 atggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcattgag 442 |||||||| ||||| |||||||| ||||| | ||| | ||||||||||| |||||||| Sbjct: 48503 atggattttaccaccgacaagcttaggtcattggtgcgtaagtggcagactctcattgaa 48562 Query: 443 gctcatgtcgatgtgaagaccactgacaattacatgctccgcatgtttgccattggcttc 502 |||||||| ||||| ||||||||||| || || | | | ||||| |||||| ||| Sbjct: 48563 gctcatgtggatgttaagaccactgataactatactttgagaatgttctgcattgggttc 48622 Query: 503 accaagagacgcccaaaccaggtcaagcgcacttgctatgctcaagcaagtca 555 |||||||| ||| |||||||||| ||| | ||||| ||||| ||| ||||||| Sbjct: 48623 accaagaggcgctcaaaccaggtgaagaggacttgttatgcccaatcaagtca 48675 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 76 catggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaa 132 |||||||||||| | ||||||| | || || ||||| | ||||||| |||||||||| Sbjct: 47391 catggcggtcggaaagaacaagagaatttcaaagggaaagaagggtggcaagaagaa 47447
>gb|AC135320.6| Medicago truncatula clone mth2-28e9, complete sequence Length = 108644 Score = 81.8 bits (41), Expect = 2e-12 Identities = 140/173 (80%) Strand = Plus / Minus Query: 383 atggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcattgag 442 |||||||| ||||| |||||||| ||||| | ||| | ||||||||||| |||||||| Sbjct: 42408 atggattttaccaccgacaagcttaggtcattggtgcgtaagtggcagactctcattgaa 42349 Query: 443 gctcatgtcgatgtgaagaccactgacaattacatgctccgcatgtttgccattggcttc 502 |||||||| ||||| ||||||||||| || || | | | ||||| |||||| ||| Sbjct: 42348 gctcatgtggatgttaagaccactgataactatactttgagaatgttctgcattgggttc 42289 Query: 503 accaagagacgcccaaaccaggtcaagcgcacttgctatgctcaagcaagtca 555 |||||||| ||| |||||||||| ||| | ||||| ||||| ||| ||||||| Sbjct: 42288 accaagaggcgctcaaaccaggtgaagaggacttgttatgcccaatcaagtca 42236 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Minus Query: 76 catggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaa 132 |||||||||||| | ||||||| | || || ||||| | ||||||| |||||||||| Sbjct: 43520 catggcggtcggaaagaacaagagaatttcaaagggaaagaagggtggcaagaagaa 43464
>gb|BT019079.1| Zea mays clone Contig661.F mRNA sequence Length = 1229 Score = 79.8 bits (40), Expect = 9e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 493 cattggcttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctcaagcaag 552 |||||| || |||||||| |||||||||||||||||| | || ||||||||||| ||| Sbjct: 603 cattggttttaccaagaggcgcccaaaccaggtcaagagaacctgctatgctcaggcatc 544 Query: 553 tcagatcagacagatccgccggaagatggttgagatcatggtcaacca 600 ||||| | ||||| ||||| |||||||||||||| ||| ||||||| Sbjct: 543 ccagattcggcagattcgccgcaagatggttgagattatgatcaacca 496
>dbj|AB116637.1| Lentinula edodes Le. cyc07 mRNA for putative S-phase specific ribosomal protein cyc07, complete cds Length = 980 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 383 atggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcattgag 442 |||||||||||| | |||||||| | ||||| || |||| |||||||| |||||||| Sbjct: 367 atggatttcacctccgacaagctgcgatctctcgtacggaaatggcagactctcattgaa 426 Query: 443 gctcatgtcgatgtgaagaccactgac 469 || |||||||||||||||||||||||| Sbjct: 427 gcccatgtcgatgtgaagaccactgac 453
>gb|DQ268842.1| Solanum tuberosum clone 135C12 40S ribosomal protein S3a-like protein mRNA, complete cds Length = 1059 Score = 75.8 bits (38), Expect = 1e-10 Identities = 191/242 (78%) Strand = Plus / Plus Query: 227 acacagggtaccaagattgcctcagagggcctgaagcaccgggtgtttgaagtatctcta 286 ||||||||||| |||||||| ||||| ||||||||||| || ||||||||||| || | Sbjct: 182 acacagggtacaaagattgcttcagaaggcctgaagcatcgtgtgtttgaagtgtcattg 241 Query: 287 gctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgctgaggat 346 |||||||||||||| || || || || ||| ||||||||| | || | ||||| ||| Sbjct: 242 gctgatcttcagaatgacgaagatcactccttcaggaagattcgtcttagagctgaagat 301 Query: 347 gtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgacaagctc 406 || ||||| | |||||| | ||||||||| || ||||| |||||||| || || | Sbjct: 302 gtccaaggaagaaatgtcttgacaaacttccatggtatggacttcaccacagataaattg 361 Query: 407 aggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaagaccact 466 ||||| ||||| | ||| ||||| | | |||||||||||||| ||||| ||||| ||| Sbjct: 362 aggtcacttgtaaagaaatggcaatcattgattgaggctcatgttgatgttaagacaact 421 Query: 467 ga 468 || Sbjct: 422 ga 423
>gb|L31645.1|HNNSPSP Helianthus annuus ribosomal protein S3a mRNA, complete cds Length = 982 Score = 75.8 bits (38), Expect = 1e-10 Identities = 191/242 (78%) Strand = Plus / Plus Query: 230 cagggtaccaagattgcctcagagggcctgaagcaccgggtgtttgaagtatctctagct 289 |||||||| |||||||| || ||||| |||| || ||||||||||| || ||| | ||| Sbjct: 223 cagggtactaagattgcttccgagggattgaaacatcgggtgtttgaggtgtctttggct 282 Query: 290 gatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgctgaggatgtg 349 ||||| ||||| ||||| || || ||||||| |||||| | | | ||||| || || Sbjct: 283 gatctccagaatgatgaagatcattcctacagaaagatccggttgagagctgaagacgtt 342 Query: 350 caagggatgaatgtcctcacaaacttctggggcatggatttcaccactgacaagctcagg 409 ||||||| |||||| | || || |||||||| |||||| | ||||| || ||||||||| Sbjct: 343 caagggaagaatgttttgaccaatttctggggtatggatgttaccacagataagctcagg 402 Query: 410 tctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaagaccactgac 469 || ||||||| ||| |||||| | | || || || ||||||||||| ||||| || ||| Sbjct: 403 tcgcttgtgaagaaatggcagtctttgatcgaagcacatgtcgatgttaagacaaccgac 462 Query: 470 aa 471 || Sbjct: 463 aa 464
>ref|XM_774945.1| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal protein S3a, transcript variant 1 (LOC575056), mRNA Length = 1003 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 196 ccgcaacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcagaggg 255 ||||||| |||||||||| ||||| ||||||||||||| || || || ||||| || || Sbjct: 130 ccgcaacatcggcaagactctcgtaaccaggacacagggaacaaaaatcgcctctgacgg 189 Query: 256 cctgaagcaccgggtgtttgaagtatctctagctgatcttcagaacgatgagg 308 |||||| || |||||||| || ||||| |||||||| ||||||||||||| Sbjct: 190 tctgaagggacgtgtgtttgaggtctctctggctgatctgcagaacgatgagg 242 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 566 atccgccggaagatggttgagatcatgg 593 |||||| |||||||| |||||||||||| Sbjct: 497 atccgcaggaagatgattgagatcatgg 524
>ref|XM_796644.1| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal protein S3a, transcript variant 2 (LOC575056), mRNA Length = 749 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 196 ccgcaacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcagaggg 255 ||||||| |||||||||| ||||| ||||||||||||| || || || ||||| || || Sbjct: 130 ccgcaacatcggcaagactctcgtaaccaggacacagggaacaaaaatcgcctctgacgg 189 Query: 256 cctgaagcaccgggtgtttgaagtatctctagctgatcttcagaacgatgagg 308 |||||| || |||||||| || ||||| |||||||| ||||||||||||| Sbjct: 190 tctgaagggacgtgtgtttgaggtctctctggctgatctgcagaacgatgagg 242 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 566 atccgccggaagatggttgagatcatgg 593 |||||| |||||||| |||||||||||| Sbjct: 497 atccgcaggaagatgattgagatcatgg 524
>ref|XM_785062.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S3a (V-fos transformation effector protein) (LOC585229), partial mRNA Length = 327 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 196 ccgcaacgtcggcaagaccctcgtgtccaggacacagggtaccaagattgcctcagaggg 255 ||||||| |||||||||| ||||| ||||||||||||| || || || ||||| || || Sbjct: 96 ccgcaacatcggcaagactctcgtaaccaggacacagggaacaaaaatcgcctctgacgg 155 Query: 256 cctgaagcaccgggtgtttgaagtatctctagctgatcttcagaacgatgagg 308 |||||| || |||||||| || ||||| |||||||| ||||||||||||| Sbjct: 156 tctgaagggacgtgtgtttgaggtctctctggctgatctgcagaacgatgagg 208
>emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 82 Length = 195165 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 240 agattgcctcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttcaga 299 |||||||||| ||||| ||||| ||| |||||||||| || ||||| |||||||| || | Sbjct: 4117 agattgcctctgagggactgaaacacagggtgtttgaggtttctcttgctgatctacaaa 4176 Query: 300 acgatgaggaccaggcctacaggaagatc 328 | |||||||| | ||||||||||||||| Sbjct: 4177 atgatgaggataatgcctacaggaagatc 4205 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 383 atggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcattgag 442 ||||||||||| || |||||||| ||||| | |||| |||||||||||| | ||||| Sbjct: 4330 atggatttcacaaccgacaagctaaggtcattggtgaagaagtggcagactttgattgaa 4389 Query: 443 gctcatgtcgatgtgaagaccac 465 || |||||||||||||| ||||| Sbjct: 4390 gcccatgtcgatgtgaaaaccac 4412
>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81 Length = 195921 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 240 agattgcctcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttcaga 299 |||||||||| ||||| ||||| ||| |||||||||| || ||||| |||||||| || | Sbjct: 195038 agattgcctctgagggactgaaacacagggtgtttgaggtttctcttgctgatctacaaa 195097 Query: 300 acgatgaggaccaggcctacaggaagatc 328 | |||||||| | ||||||||||||||| Sbjct: 195098 atgatgaggataatgcctacaggaagatc 195126 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 383 atggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcattgag 442 ||||||||||| || |||||||| ||||| | |||| |||||||||||| | ||||| Sbjct: 195251 atggatttcacaaccgacaagctaaggtcattggtgaagaagtggcagactttgattgaa 195310 Query: 443 gctcatgtcgatgtgaagaccac 465 || |||||||||||||| ||||| Sbjct: 195311 gcccatgtcgatgtgaaaaccac 195333
>emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome 4, BAC clone T4L20 (ESSA project) Length = 125502 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 240 agattgcctcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttcaga 299 |||||||||| ||||| ||||| ||| |||||||||| || ||||| |||||||| || | Sbjct: 85349 agattgcctctgagggactgaaacacagggtgtttgaggtttctcttgctgatctacaaa 85408 Query: 300 acgatgaggaccaggcctacaggaagatc 328 | |||||||| | ||||||||||||||| Sbjct: 85409 atgatgaggataatgcctacaggaagatc 85437 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 383 atggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcattgag 442 ||||||||||| || |||||||| ||||| | |||| |||||||||||| | ||||| Sbjct: 85562 atggatttcacaaccgacaagctaaggtcattggtgaagaagtggcagactttgattgaa 85621 Query: 443 gctcatgtcgatgtgaagaccac 465 || |||||||||||||| ||||| Sbjct: 85622 gcccatgtcgatgtgaaaaccac 85644
>ref|NM_111356.3| Arabidopsis thaliana structural constituent of ribosome AT3G04840 mRNA, complete cds Length = 1004 Score = 71.9 bits (36), Expect = 2e-09 Identities = 201/256 (78%) Strand = Plus / Plus Query: 221 tccaggacacagggtaccaagattgcctcagagggcctgaagcaccgggtgtttgaagta 280 ||||| || ||||||||||| ||||||||||| ||| |||| ||| | || ||||| || Sbjct: 203 tccagaactcagggtaccaaaattgcctcagaaggcttgaaacacagagtttttgaggtt 262 Query: 281 tctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgct 340 ||||| ||||||||||| |||||||| | || |||||||||||| | ||| | ||| Sbjct: 263 tctcttgctgatcttcaaggtgatgaggataacgcttacaggaagatccgtctcagagct 322 Query: 341 gaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgac 400 || ||||| || || | ||| || || | |||||||||||||| |||||||| || Sbjct: 323 gaagatgtccagggcaggaacgttctgtgccaattctggggcatggacttcaccaccgat 382 Query: 401 aagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaag 460 || || ||||| | || | |||||||||||| | |||||||||||||| ||||| || Sbjct: 383 aaacttaggtcattggttaagaagtggcagactttgattgaggctcatgttgatgttaaa 442 Query: 461 accactgacaattaca 476 ||||| |||| ||||| Sbjct: 443 accaccgacagttaca 458 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 499 cttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctcaagcaagtcagat 558 ||||||||||||||| | |||||||||||| | |||||||| |||||| | || || || Sbjct: 481 cttcaccaagagacgtgctaaccaggtcaagaggacttgctacgctcaatccagccaaat 540 Query: 559 cagacagatccgccggaagatg 580 | | ||||||||| |||||||| Sbjct: 541 ccgtcagatccgcaggaagatg 562 Score = 44.1 bits (22), Expect = 0.52 Identities = 67/82 (81%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaagg 134 ||||||| ||||| | |||||| | ||||| ||||| |||||||| | |||||||||| Sbjct: 57 ccatggccgtcgggaaaaacaagagaatctctaagggtaggaagggaggaaagaagaagg 116 Query: 135 ccgtggatccgttcaccaagaa 156 | || ||||| ||| ||||||| Sbjct: 117 ctgttgatcctttctccaagaa 138
>gb|AY081585.1| Arabidopsis thaliana putative 40S ribosomal protein S3A (S phase specific) (At3g04840) mRNA, complete cds Length = 870 Score = 71.9 bits (36), Expect = 2e-09 Identities = 201/256 (78%) Strand = Plus / Plus Query: 221 tccaggacacagggtaccaagattgcctcagagggcctgaagcaccgggtgtttgaagta 280 ||||| || ||||||||||| ||||||||||| ||| |||| ||| | || ||||| || Sbjct: 145 tccagaactcagggtaccaaaattgcctcagaaggcttgaaacacagagtttttgaggtt 204 Query: 281 tctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgct 340 ||||| ||||||||||| |||||||| | || |||||||||||| | ||| | ||| Sbjct: 205 tctcttgctgatcttcaaggtgatgaggataacgcttacaggaagatccgtctcagagct 264 Query: 341 gaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgac 400 || ||||| || || | ||| || || | |||||||||||||| |||||||| || Sbjct: 265 gaagatgtccagggcaggaacgttctgtgccaattctggggcatggacttcaccaccgat 324 Query: 401 aagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaag 460 || || ||||| | || | |||||||||||| | |||||||||||||| ||||| || Sbjct: 325 aaacttaggtcattggttaagaagtggcagactttgattgaggctcatgttgatgttaaa 384 Query: 461 accactgacaattaca 476 ||||| |||| ||||| Sbjct: 385 accaccgacagttaca 400 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 499 cttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctcaagcaagtcagat 558 ||||||||||||||| | |||||||||||| | |||||||| |||||| | || || || Sbjct: 423 cttcaccaagagacgtgctaaccaggtcaagaggacttgctacgctcaatccagccaaat 482 Query: 559 cagacagatccgccggaagatg 580 | | ||||||||| |||||||| Sbjct: 483 ccgtcagatccgcaggaagatg 504 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 92 aacaagcgcatctccaaggggaggaagggtagcaagaagaaggccgtggatccgttcacc 151 |||||| | ||||| ||||| |||||||| | ||||||||||| || ||||| ||| || Sbjct: 16 aacaagagaatctctaagggtaggaagggaggaaagaagaaggctgttgatcctttctcc 75 Query: 152 aagaa 156 ||||| Sbjct: 76 aagaa 80
>gb|AY062796.1| Arabidopsis thaliana putative 40S ribosomal protein S3A (S phase specific) (At3g04840; T9J14.21) mRNA, complete cds Length = 1000 Score = 71.9 bits (36), Expect = 2e-09 Identities = 201/256 (78%) Strand = Plus / Plus Query: 221 tccaggacacagggtaccaagattgcctcagagggcctgaagcaccgggtgtttgaagta 280 ||||| || ||||||||||| ||||||||||| ||| |||| ||| | || ||||| || Sbjct: 202 tccagaactcagggtaccaaaattgcctcagaaggcttgaaacacagagtttttgaggtt 261 Query: 281 tctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgct 340 ||||| ||||||||||| |||||||| | || |||||||||||| | ||| | ||| Sbjct: 262 tctcttgctgatcttcaaggtgatgaggataacgcttacaggaagatccgtctcagagct 321 Query: 341 gaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgac 400 || ||||| || || | ||| || || | |||||||||||||| |||||||| || Sbjct: 322 gaagatgtccagggcaggaacgttctgtgccaattctggggcatggacttcaccaccgat 381 Query: 401 aagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaag 460 || || ||||| | || | |||||||||||| | |||||||||||||| ||||| || Sbjct: 382 aaacttaggtcattggttaagaagtggcagactttgattgaggctcatgttgatgttaaa 441 Query: 461 accactgacaattaca 476 ||||| |||| ||||| Sbjct: 442 accaccgacagttaca 457 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 499 cttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctcaagcaagtcagat 558 ||||||||||||||| | |||||||||||| | |||||||| |||||| | || || || Sbjct: 480 cttcaccaagagacgtgctaaccaggtcaagaggacttgctacgctcaatccagccaaat 539 Query: 559 cagacagatccgccggaagatg 580 | | ||||||||| |||||||| Sbjct: 540 ccgtcagatccgcaggaagatg 561 Score = 44.1 bits (22), Expect = 0.52 Identities = 67/82 (81%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaagg 134 ||||||| ||||| | |||||| | ||||| ||||| |||||||| | |||||||||| Sbjct: 56 ccatggccgtcgggaaaaacaagagaatctctaagggtaggaagggaggaaagaagaagg 115 Query: 135 ccgtggatccgttcaccaagaa 156 | || ||||| ||| ||||||| Sbjct: 116 ctgttgatcctttctccaagaa 137
>emb|BX824488.1|CNS0A5KP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH51ZC05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 927 Score = 71.9 bits (36), Expect = 2e-09 Identities = 201/256 (78%) Strand = Plus / Plus Query: 221 tccaggacacagggtaccaagattgcctcagagggcctgaagcaccgggtgtttgaagta 280 ||||| || ||||||||||| ||||||||||| ||| |||| ||| | || ||||| || Sbjct: 135 tccagaactcagggtaccaaaattgcctcagaaggcttgaaacacagagtttttgaggtt 194 Query: 281 tctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgct 340 ||||| ||||||||||| |||||||| | || |||||||||||| | ||| | ||| Sbjct: 195 tctcttgctgatcttcaaggtgatgaggataacgcttacaggaagatccgtctcagagct 254 Query: 341 gaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgac 400 || ||||| || || | ||| || || | |||||||||||||| |||||||| || Sbjct: 255 gaagatgtccagggcaggaacgttctgtgccaattctggggcatggacttcaccaccgat 314 Query: 401 aagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaag 460 || || ||||| | || | |||||||||||| | |||||||||||||| ||||| || Sbjct: 315 aaacttaggtcattggttaagaagtggcagactttgattgaggctcatgttgatgttaaa 374 Query: 461 accactgacaattaca 476 ||||| |||| ||||| Sbjct: 375 accaccgacagttaca 390 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 499 cttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctcaagcaagtcagat 558 ||||||||||||||| | |||||||||||| | |||||||| |||||| | || || || Sbjct: 413 cttcaccaagagacgtgctaaccaggtcaagaggacttgctacgctcaatccagccaaat 472 Query: 559 cagacagatccgccggaagatg 580 | | ||||||||| |||||||| Sbjct: 473 ccgtcagatccgcaggaagatg 494 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 92 aacaagcgcatctccaaggggaggaagggtagcaagaagaaggccgtggatccgttcacc 151 |||||| | ||||| ||||| |||||||| | ||||||||||| || ||||| ||| || Sbjct: 6 aacaagagaatctctaagggtaggaagggaggaaagaagaaggctgttgatcctttctcc 65 Query: 152 aagaa 156 ||||| Sbjct: 66 aagaa 70
>gb|AY085787.1| Arabidopsis thaliana clone 18185 mRNA, complete sequence Length = 1001 Score = 71.9 bits (36), Expect = 2e-09 Identities = 201/256 (78%) Strand = Plus / Plus Query: 221 tccaggacacagggtaccaagattgcctcagagggcctgaagcaccgggtgtttgaagta 280 ||||| || ||||||||||| ||||||||||| ||| |||| ||| | || ||||| || Sbjct: 203 tccagaactcagggtaccaaaattgcctcagaaggcttgaaacacagagtttttgaggtt 262 Query: 281 tctctagctgatcttcagaacgatgaggaccaggcctacaggaagatcagactccgtgct 340 ||||| ||||||||||| |||||||| | || |||||||||||| | ||| | ||| Sbjct: 263 tctcttgctgatcttcaaggtgatgaggataacgcttacaggaagatccgtctcagagct 322 Query: 341 gaggatgtgcaagggatgaatgtcctcacaaacttctggggcatggatttcaccactgac 400 || ||||| || || | ||| || || | |||||||||||||| |||||||| || Sbjct: 323 gaagatgtccagggcaggaacgttctgtgccaattctggggcatggacttcaccaccgat 382 Query: 401 aagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaag 460 || || ||||| | || | |||||||||||| | |||||||||||||| ||||| || Sbjct: 383 aaacttaggtcattggttaagaagtggcagactttgattgaggctcatgttgatgttaaa 442 Query: 461 accactgacaattaca 476 ||||| |||| ||||| Sbjct: 443 accaccgacagttaca 458 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 499 cttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctcaagcaagtcagat 558 ||||||||||||||| | |||||||||||| | |||||||| |||||| | || || || Sbjct: 481 cttcaccaagagacgtgctaaccaggtcaagaggacttgctacgctcaatccagccaaat 540 Query: 559 cagacagatccgccggaagatg 580 | | ||||||||| |||||||| Sbjct: 541 ccgtcagatccgcaggaagatg 562 Score = 44.1 bits (22), Expect = 0.52 Identities = 67/82 (81%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaagg 134 ||||||| ||||| | |||||| | ||||| ||||| |||||||| | |||||||||| Sbjct: 57 ccatggccgtcgggaaaaacaagagaatctctaagggtaggaagggaggaaagaagaagg 116 Query: 135 ccgtggatccgttcaccaagaa 156 | || ||||| ||| ||||||| Sbjct: 117 ctgttgatcctttctccaagaa 138
>dbj|D01058.1|CTRCYC07 Catharanthus roseus cyc07 mRNA, complete cds Length = 1100 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 371 aacttctggggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcag 430 ||||||||||| ||||| ||||| || || ||| | ||||||||||||||||||||||| Sbjct: 366 aacttctggggtatggacttcactacagataagttgaggtctcttgtgaggaagtggcaa 425 Query: 431 accctcattgaggctcatgtcgatgtgaagaccactgaca 470 || | || || |||||||| ||||| ||||| ||||||| Sbjct: 426 tccttgatagaagctcatgttgatgttaagacaactgaca 465 Score = 44.1 bits (22), Expect = 0.52 Identities = 52/62 (83%) Strand = Plus / Plus Query: 539 tatgctcaagcaagtcagatcagacagatccgccggaagatggttgagatcatggtcaac 598 ||||| ||| ||||||| ||| | ||||| || ||||||||| ||||||||||||||| Sbjct: 534 tatgcacaatcaagtcaaatccgccagattcgtcggaagatgcgggagatcatggtcaac 593 Query: 599 ca 600 || Sbjct: 594 ca 595 Score = 44.1 bits (22), Expect = 0.52 Identities = 85/106 (80%) Strand = Plus / Plus Query: 72 caaccatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaaga 131 |||||||||| ||||| | ||||||| | || || ||||| | ||| || | ||||||| Sbjct: 67 caaccatggccgtcggtaagaacaagaggatatcgaagggtaagaaaggaggaaagaaga 126 Query: 132 aggccgtggatccgttcaccaagaagcagtggtatgacatcaaggc 177 |||| | |||||| || |||||||| | |||||||| |||||||| Sbjct: 127 aggcagcggatccatttgccaagaaggattggtatgatatcaaggc 172
>gb|BT012853.1| Lycopersicon esculentum clone 113933F, mRNA sequence Length = 1053 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 227 acacagggtaccaagattgcctcagagggcctgaagcaccgggtgtttgaagtatctcta 286 ||||||||||| |||||||| ||||| ||||||||||| || ||||| ||||| || | Sbjct: 222 acacagggtacaaagattgcttcagaaggcctgaagcatcgtgtgttcgaagtgtcattg 281 Query: 287 gctgatcttcagaa 300 |||||||||||||| Sbjct: 282 gctgatcttcagaa 295
>emb|BX822077.1|CNS0A7LX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB10ZB01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 716 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 374 ttctggggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagacc 433 |||||||||||||| |||||||| || || || ||||| | || | |||||||||||| Sbjct: 68 ttctggggcatggacttcaccaccgataaacttaggtcattggttaagaagtggcagact 127 Query: 434 ctcattgaggctcatgtcgatgtgaagaccactgacaattaca 476 | |||||||||||||| ||||| || ||||| |||| ||||| Sbjct: 128 ttgattgaggctcatgttgatgttaaaaccaccgacagttaca 170 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 499 cttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctcaagcaagtcagat 558 ||||||||||||||| | |||||||||||| | |||||||| |||||| | || || || Sbjct: 193 cttcaccaagagacgtgctaaccaggtcaagaggacttgctacgctcaatccagccaaat 252 Query: 559 cagacagatccgccggaagatg 580 | | ||||||||| |||||||| Sbjct: 253 ccgtcagatccgcaggaagatg 274
>gb|AY857460.1| Suberites domuncula S3a mRNA, complete cds Length = 759 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 392 accactgacaagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtc 451 ||||| ||||| |||||| | ||||| | ||| |||||||| || |||||||| ||||| Sbjct: 313 accacagacaaactcagggcacttgtaaagaaatggcagactctgattgaggccaatgtc 372 Query: 452 gatgtgaagaccactga 468 ||||||||||| ||||| Sbjct: 373 gatgtgaagacaactga 389
>ref|XM_568980.1| Cryptococcus neoformans var. neoformans JEC21 40s ribosomal protein s3ae-a (s1-a) (CNB04880) partial mRNA Length = 826 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgcatctccaaggggaggaagggtagcaagaagaag 133 |||||||| ||||||| ||||||| | | || ||||| | |||||| | ||||||||| Sbjct: 10 accatggctgtcggcaagaacaagaggctttcaaagggaaagaagggaattaagaagaag 69 Query: 134 gccgtggatccgttcaccaagaagcagtggtatgacatcaaggc 177 | ||| || || ||||||| |||| ||||||| ||||||||||| Sbjct: 70 gtcgtcgaccccttcaccaggaaggagtggtacgacatcaaggc 113
>dbj|D26058.1|CTRCYC07A Catharanthus roseus cyc07 gene, exon1-7, complete cds Length = 4798 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 407 aggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgtgaagaccact 466 ||||||||||||||||||||||| || | || || |||||||| ||||| ||||| ||| Sbjct: 3458 aggtctcttgtgaggaagtggcaatccttgatagaagctcatgttgatgttaagacaact 3517 Query: 467 gaca 470 |||| Sbjct: 3518 gaca 3521
>ref|XM_420443.1| PREDICTED: Gallus gallus similar to 40S ribosomal protein S3a (V-fos transformation effector protein) (LOC422477), mRNA Length = 1423 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgcatctccaaggg 111 |||||||||||||||| |||||||||| || ||||||| Sbjct: 661 accatggcggtcggcaagaacaagcgcctcaccaaggg 698
>emb|AJ720257.1| Gallus gallus partial mRNA for hypothetical protein, clone 13j13 Length = 107 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgcatctccaaggg 111 |||||||||||||||| |||||||||| || ||||||| Sbjct: 23 accatggcggtcggcaagaacaagcgcctcaccaaggg 60
>gb|AC009465.7|AC009465 Arabidopsis thaliana chromosome 3 BAC T9J14 genomic sequence, complete sequence Length = 93234 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 379 gggcatggatttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcat 438 ||||||||| |||||||| || || || ||||| | || | |||||||||||| | || Sbjct: 74315 gggcatggacttcaccaccgataaacttaggtcattggttaagaagtggcagactttgat 74256 Query: 439 tgaggctcatgtcgatgtgaagaccactgacaattaca 476 |||||||||||| ||||| || ||||| |||| ||||| Sbjct: 74255 tgaggctcatgttgatgttaaaaccaccgacagttaca 74218 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 499 cttcaccaagagacgcccaaaccaggtcaagcgcacttgctatgctcaa 547 ||||||||||||||| | |||||||||||| | |||||||| |||||| Sbjct: 74195 cttcaccaagagacgtgctaaccaggtcaagaggacttgctacgctcaa 74147 Score = 44.1 bits (22), Expect = 0.52 Identities = 49/58 (84%) Strand = Plus / Minus Query: 240 agattgcctcagagggcctgaagcaccgggtgtttgaagtatctctagctgatcttca 297 ||||||||||||| ||| |||| ||| | || ||||| || ||||| ||||||||||| Sbjct: 74563 agattgcctcagaaggcttgaaacacagagtttttgaggtttctcttgctgatcttca 74506
>gb|AF042107.1|AF042107 Eimeria tenella ribosomal protein S3a mRNA, complete cds Length = 858 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgcatctccaaggg 111 |||||||||||||||| |||||||||| || ||||||| Sbjct: 4 accatggcggtcggcaagaacaagcgcctcaccaaggg 41
>emb|X68555.1|ACKRPA A.californica KRP-A gene Length = 849 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 397 tgacaagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcatgtcgatgt 456 |||||||||| | ||| | |||| |||||||||||| || |||||||| |||| ||||| Sbjct: 330 tgacaagctctgctctatggtgaagaagtggcagactcttattgaggccaatgttgatgt 389 Query: 457 gaagac 462 |||||| Sbjct: 390 gaagac 395 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 287 gctgatcttcagaacgatgagg 308 |||||||||||||||||||||| Sbjct: 223 gctgatcttcagaacgatgagg 244
>gb|AY850276.1| Periplaneta americana Parcxpwex01 mRNA, complete cds Length = 893 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 227 acacagggtaccaagattgcctcagagggcctgaagcaccgggtgtttgaagtatctcta 286 |||||||| || |||||||| |||||||| ||||| || | ||||||||||| ||||| Sbjct: 162 acacagggcacaaagattgcgtcagagggtttgaagtacagagtgtttgaagtgtctctg 221 Query: 287 gctgat 292 |||||| Sbjct: 222 gctgat 227
>gb|BC058483.1| Rattus norvegicus ribosomal protein S3a, mRNA (cDNA clone MGC:72868 IMAGE:6887884), complete cds Length = 896 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 422 aagtggcagaccctcattgaggctcatgtcgatgtgaagac 462 |||||||||||| | ||||| |||||||| ||||||||||| Sbjct: 375 aagtggcagaccatgattgaagctcatgttgatgtgaagac 415
>ref|NM_017153.1| Rattus norvegicus ribosomal protein S3a (Rps3a), mRNA Length = 880 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 422 aagtggcagaccctcattgaggctcatgtcgatgtgaagac 462 |||||||||||| | ||||| |||||||| ||||||||||| Sbjct: 370 aagtggcagaccatgattgaagctcatgttgatgtgaagac 410
>gb|AY151152.1| Ilyanassa obsoleta 40S ribosomal protein-like protein mRNA, partial cds Length = 489 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 421 gaagtggcagaccctcattgaggctcatgtcgatgtgaagaccac 465 ||||||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 36 gaagtggcagaccctgatcgaggcccatgtggacgtgaagaccac 80
>emb|X75161.1|RNRNAS3A R.norvegicus (Sprague-Dawley) mRNA for ribosomal protein S3a Length = 880 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 422 aagtggcagaccctcattgaggctcatgtcgatgtgaagac 462 |||||||||||| | ||||| |||||||| ||||||||||| Sbjct: 370 aagtggcagaccatgattgaagctcatgttgatgtgaagac 410
>gb|BC106115.1| Mus musculus ribosomal protein S3a, mRNA (cDNA clone MGC:117914 IMAGE:2599128), complete cds Length = 870 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 12 accatggcggtcggcaagaacaagcgc 38
>gb|AC156571.3| Mus musculus BAC clone RP23-264I19 from chromosome 13, complete sequence Length = 196911 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 22654 accatggcggtcggcaagaacaagcgc 22628
>gb|AC104414.8| Mus musculus chromosome 3, clone RP23-99I7, complete sequence Length = 212613 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 81045 accatggcggtcggcaagaacaagcgc 81019
>gb|BC084675.1| Mus musculus ribosomal protein S3a, mRNA (cDNA clone MGC:102469 IMAGE:5319512), complete cds Length = 869 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 14 accatggcggtcggcaagaacaagcgc 40
>gb|BC083338.1| Mus musculus ribosomal protein S3a, mRNA (cDNA clone MGC:102070 IMAGE:6820218), complete cds Length = 861 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 3 accatggcggtcggcaagaacaagcgc 29
>ref|XM_871858.1| PREDICTED: Bos taurus similar to ribosomal protein S3a, transcript variant 4 (LOC613340), mRNA Length = 872 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 31 accatggcggtcggcaagaacaagcgc 57
>ref|XM_863937.1| PREDICTED: Bos taurus similar to ribosomal protein S3a, transcript variant 1 (LOC613340), mRNA Length = 910 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 32 accatggcggtcggcaagaacaagcgc 58
>ref|XM_871665.1| PREDICTED: Bos taurus similar to ribosomal protein S3a, transcript variant 3 (LOC613340), mRNA Length = 587 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 17 accatggcggtcggcaagaacaagcgc 43
>ref|XM_871576.1| PREDICTED: Bos taurus similar to ribosomal protein S3a, transcript variant 2 (LOC613340), mRNA Length = 717 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 6 accatggcggtcggcaagaacaagcgc 32
>ref|XM_872846.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 6 (LOC613460), mRNA Length = 918 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 33 accatggcggtcggcaagaacaagcgc 59
>ref|XM_872754.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 5 (LOC613460), mRNA Length = 862 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 17 accatggcggtcggcaagaacaagcgc 43
>ref|XM_593124.2| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 2 (LOC613460), mRNA Length = 876 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 33 accatggcggtcggcaagaacaagcgc 59
>ref|XM_872539.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 4 (LOC613460), mRNA Length = 584 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 17 accatggcggtcggcaagaacaagcgc 43
>ref|XM_872447.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 3 (LOC613460), mRNA Length = 714 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 6 accatggcggtcggcaagaacaagcgc 32
>gb|AC133508.3| Mus musculus BAC clone RP23-383K24 from chromosome 3, complete sequence Length = 192136 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 21193 accatggcggtcggcaagaacaagcgc 21219
>ref|NM_016959.2| Mus musculus ribosomal protein S3a (Rps3a), mRNA Length = 863 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 23 accatggcggtcggcaagaacaagcgc 49
>ref|XM_974769.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S3a (LOC674452), mRNA Length = 889 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 21 accatggcggtcggcaagaacaagcgc 47
>ref|XM_994545.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S3a (LOC668144), mRNA Length = 889 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 21 accatggcggtcggcaagaacaagcgc 47
>ref|XR_002919.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S3a (LOC544977), mRNA Length = 895 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 21 accatggcggtcggcaagaacaagcgc 47
>ref|XR_002253.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S3a (V-fos transformation effector protein) (LOC668799), mRNA Length = 847 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 8 accatggcggtcggcaagaacaagcgc 34
>ref|XR_005031.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S3a (V-fos transformation effector protein) (LOC677290), mRNA Length = 853 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 8 accatggcggtcggcaagaacaagcgc 34
>emb|BX039677.1|CNS092S1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC10AD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 923 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 128 aagaaggccgtggatccgttcac 150 ||||||||||||||||||||||| Sbjct: 80 aagaaggccgtggatccgttcac 102
>emb|Z83368.1|MMRPS3A M.musculus RPS3a gene Length = 5695 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 842 accatggcggtcggcaagaacaagcgc 868
>gb|BC081451.1| Mus musculus ribosomal protein S3a, mRNA (cDNA clone MGC:102071 IMAGE:6824188), complete cds Length = 872 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 10 accatggcggtcggcaagaacaagcgc 36
>dbj|AK146304.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730048K19 product:ribosomal protein S3a, full insert sequence Length = 871 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 31 accatggcggtcggcaagaacaagcgc 57
>dbj|AK135318.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720473N01 product:ribosomal protein S3a, full insert sequence Length = 864 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 24 accatggcggtcggcaagaacaagcgc 50
>dbj|AK151982.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830044H24 product:ribosomal protein S3a, full insert sequence Length = 873 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 33 accatggcggtcggcaagaacaagcgc 59
>dbj|AK150814.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830015K17 product:ribosomal protein S3a, full insert sequence Length = 863 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 23 accatggcggtcggcaagaacaagcgc 49
>dbj|AK150796.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830015H22 product:ribosomal protein S3a, full insert sequence Length = 873 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 33 accatggcggtcggcaagaacaagcgc 59
>dbj|AK148513.1| Mus musculus adult pancreas islet cells cDNA, RIKEN full-length enriched library, clone:C820015M15 product:ribosomal protein S3a, full insert sequence Length = 863 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 23 accatggcggtcggcaagaacaagcgc 49
>dbj|AK151429.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830030B03 product:ribosomal protein S3a, full insert sequence Length = 864 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 24 accatggcggtcggcaagaacaagcgc 50
>dbj|AK150441.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830007K16 product:ribosomal protein S3a, full insert sequence Length = 862 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 23 accatggcggtcggcaagaacaagcgc 49
>dbj|AK166713.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0005O17 product:40S ribosomal protein S3a homolog [Mus musculus], full insert sequence Length = 865 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 21 accatggcggtcggcaagaacaagcgc 47
>dbj|AK153480.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830165N20 product:ribosomal protein S3a, full insert sequence Length = 863 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 23 accatggcggtcggcaagaacaagcgc 49
>dbj|AK167562.1| Mus musculus 11 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530022H01 product:ribosomal protein S3a, full insert sequence Length = 862 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 22 accatggcggtcggcaagaacaagcgc 48
>dbj|AK167512.1| Mus musculus 11 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530018C11 product:ribosomal protein S3a, full insert sequence Length = 870 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 24 accatggcggtcggcaagaacaagcgc 50
>dbj|AK159777.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420030N20 product:ribosomal protein S3a, full insert sequence Length = 869 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 23 accatggcggtcggcaagaacaagcgc 49
>dbj|AK168240.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730070G06 product:ribosomal protein S3a, full insert sequence Length = 868 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 21 accatggcggtcggcaagaacaagcgc 47
>dbj|AK010605.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410029J05 product:ribosomal protein S3a, full insert sequence Length = 860 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 20 accatggcggtcggcaagaacaagcgc 46
>dbj|AK003158.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1100001E09 product:ribosomal protein S3a, full insert sequence Length = 863 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 23 accatggcggtcggcaagaacaagcgc 49
>dbj|AK088113.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430004H05 product:ribosomal protein S3a, full insert sequence Length = 860 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 20 accatggcggtcggcaagaacaagcgc 46
>dbj|AK050610.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:C920016J02 product:ribosomal protein S3a, full insert sequence Length = 862 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 23 accatggcggtcggcaagaacaagcgc 49
>gb|BC039659.1| Mus musculus ribosomal protein S3a, mRNA (cDNA clone MGC:49186 IMAGE:5025347), complete cds Length = 877 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 22 accatggcggtcggcaagaacaagcgc 48
>dbj|AK012345.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700038N16 product:ribosomal protein S3a, full insert sequence Length = 860 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 20 accatggcggtcggcaagaacaagcgc 46
>gb|AC112969.12| Mus musculus chromosome 8, clone RP24-331K7, complete sequence Length = 164201 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 92495 accatggcggtcggcaagaacaagcgc 92469
>dbj|AK196258.1| Mus musculus cDNA, clone:Y1G0121E15, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000029722, based on BLAT search Length = 282 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 9 accatggcggtcggcaagaacaagcgc 35
>emb|CT571277.10| Mouse DNA sequence from clone RP24-327L5 on chromosome 14, complete sequence Length = 142749 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 34612 accatggcggtcggcaagaacaagcgc 34586
>emb|AL691416.9| Mouse DNA sequence from clone RP23-110I8 on chromosome 2, complete sequence Length = 208363 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 74 accatggcggtcggcaggaacaagcgc 100 |||||||||||||||| |||||||||| Sbjct: 155043 accatggcggtcggcaagaacaagcgc 155017
>ref|XM_862563.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 13 (RPS3A), mRNA Length = 1051 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 7 ccatggcggtcggcaagaacaagcgc 32
>ref|XM_862552.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 12 (RPS3A), mRNA Length = 1051 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 7 ccatggcggtcggcaagaacaagcgc 32
>ref|XM_862541.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 11 (RPS3A), mRNA Length = 852 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 51 ccatggcggtcggcaagaacaagcgc 76
>ref|XM_862533.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 10 (RPS3A), mRNA Length = 1065 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 19 ccatggcggtcggcaagaacaagcgc 44
>ref|XM_862525.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 9 (RPS3A), mRNA Length = 1056 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 50 ccatggcggtcggcaagaacaagcgc 75
>ref|XM_862515.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 8 (RPS3A), mRNA Length = 982 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 18 ccatggcggtcggcaagaacaagcgc 43
>ref|XM_862504.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 7 (RPS3A), mRNA Length = 912 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 18 ccatggcggtcggcaagaacaagcgc 43
>ref|XM_862496.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 6 (RPS3A), mRNA Length = 876 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 20 ccatggcggtcggcaagaacaagcgc 45
>ref|XM_534275.2| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 1 (RPS3A), mRNA Length = 1106 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 62 ccatggcggtcggcaagaacaagcgc 87
>ref|XM_862466.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 4 (RPS3A), mRNA Length = 769 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 17 ccatggcggtcggcaagaacaagcgc 42
>ref|XM_862454.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 3 (RPS3A), mRNA Length = 774 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 50 ccatggcggtcggcaagaacaagcgc 75
>ref|XM_862446.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 2 (RPS3A), mRNA Length = 553 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 19 ccatggcggtcggcaagaacaagcgc 44
>ref|XM_860742.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 7 (LOC609500), mRNA Length = 875 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 21 ccatggcggtcggcaagaacaagcgc 46
>ref|XM_860726.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 6 (LOC609500), mRNA Length = 857 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 21 ccatggcggtcggcaagaacaagcgc 46
>ref|XM_860710.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 5 (LOC609500), mRNA Length = 866 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 18 ccatggcggtcggcaagaacaagcgc 43
>ref|XM_860701.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 4 (LOC609500), mRNA Length = 1072 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 21 ccatggcggtcggcaagaacaagcgc 46
>ref|XM_860686.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 3 (LOC609500), mRNA Length = 879 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 21 ccatggcggtcggcaagaacaagcgc 46
>ref|XM_847366.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 1 (LOC609500), mRNA Length = 1069 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 18 ccatggcggtcggcaagaacaagcgc 43
>ref|XM_860652.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 2 (LOC609500), mRNA Length = 760 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 16 ccatggcggtcggcaagaacaagcgc 41
>ref|XM_856691.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 12 (LOC608454), mRNA Length = 874 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 33 ccatggcggtcggcaagaacaagcgc 58
>ref|XM_856663.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 11 (LOC608454), mRNA Length = 875 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 33 ccatggcggtcggcaagaacaagcgc 58
>ref|XM_856635.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 10 (LOC608454), mRNA Length = 879 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 33 ccatggcggtcggcaagaacaagcgc 58
>ref|XM_856605.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 9 (LOC608454), mRNA Length = 883 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 33 ccatggcggtcggcaagaacaagcgc 58
>ref|XM_856573.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 8 (LOC608454), mRNA Length = 883 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 33 ccatggcggtcggcaagaacaagcgc 58
>ref|XM_856546.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 7 (LOC608454), mRNA Length = 882 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 33 ccatggcggtcggcaagaacaagcgc 58
>ref|XM_856515.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 6 (LOC608454), mRNA Length = 1042 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 10 ccatggcggtcggcaagaacaagcgc 35
>ref|XM_856484.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 5 (LOC608454), mRNA Length = 1047 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 15 ccatggcggtcggcaagaacaagcgc 40
>ref|XM_856455.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 4 (LOC608454), mRNA Length = 1080 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 33 ccatggcggtcggcaagaacaagcgc 58
>ref|XM_845382.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 2 (LOC608454), mRNA Length = 1058 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 26 ccatggcggtcggcaagaacaagcgc 51
>ref|XM_856398.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 3 (LOC608454), mRNA Length = 901 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 19 ccatggcggtcggcaagaacaagcgc 44
>ref|XM_535263.2| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 1 (LOC608454), mRNA Length = 759 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 ccatggcggtcggcaggaacaagcgc 100 ||||||||||||||| |||||||||| Sbjct: 18 ccatggcggtcggcaagaacaagcgc 43
>ref|XM_855284.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 6 (LOC607824), mRNA Length = 844 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 425 tggcagaccctcattgaggctcatgtcgatgtgaagac 462 ||||||||| | ||||| |||||||| ||||||||||| Sbjct: 355 tggcagaccatgattgaagctcatgttgatgtgaagac 392
>ref|XM_855250.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 5 (LOC607824), mRNA Length = 1060 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 425 tggcagaccctcattgaggctcatgtcgatgtgaagac 462 ||||||||| | ||||| |||||||| ||||||||||| Sbjct: 355 tggcagaccatgattgaagctcatgttgatgtgaagac 392
>ref|XM_855221.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 4 (LOC607824), mRNA Length = 1042 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 425 tggcagaccctcattgaggctcatgtcgatgtgaagac 462 ||||||||| | ||||| |||||||| ||||||||||| Sbjct: 337 tggcagaccatgattgaagctcatgttgatgtgaagac 374
>gb|AC114663.8| Mus musculus chromosome 1, clone RP24-172O22, complete sequence Length = 167652 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 acaagctcaggtctcttgtgaggaagtgg 427 |||||| ||||||||||| |||||||||| Sbjct: 146589 acaagcccaggtctcttgagaggaagtgg 146617
>gb|AY596294.1| Haloarcula marismortui ATCC 43049 plasmid pNG500, complete sequence Length = 132678 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 gaccctcgtgtccaggacaca 231 ||||||||||||||||||||| Sbjct: 26758 gaccctcgtgtccaggacaca 26738
>gb|AC158967.5| Mus musculus chromosome 1, clone RP23-39N17, complete sequence Length = 244130 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 399 acaagctcaggtctcttgtgaggaagtgg 427 |||||| ||||||||||| |||||||||| Sbjct: 238451 acaagcccaggtctcttgagaggaagtgg 238479
>ref|XM_458876.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D10395g) partial mRNA Length = 771 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 125 aagaagaaggccgtggatccgttcaccaagaagcagtggtatgacatcaaggc 177 |||||||||| | | || || |||||||||||| | |||| |||||||||||| Sbjct: 49 aagaagaaggtcatcgaccctttcaccaagaaggaatggtttgacatcaaggc 101
>ref|XM_950881.1| Neurospora crassa OR74A hypothetical protein (NCU01452.1) partial mRNA Length = 1014 Score = 42.1 bits (21), Expect = 2.1 Identities = 108/137 (78%) Strand = Plus / Plus Query: 389 ttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcat 448 |||||| | ||||||||| | || ||||| | ||||||||||| ||||||||||| | Sbjct: 556 ttcacctccgacaagctccgctcgcttgtccgcaagtggcagactctcattgaggccaac 615 Query: 449 gtcgatgtgaagaccactgacaattacatgctccgcatgtttgccattggcttcaccaag 508 || || |||||||| ||| | ||| | |||||| | || ||||||| |||||||||| Sbjct: 616 atcaccgtcaagaccaccgacgactacctcctccgcctcttcgccattgccttcaccaag 675 Query: 509 agacgcccaaaccaggt 525 | ||||| |||||||| Sbjct: 676 cgccgccctaaccaggt 692
>ref|XM_327890.1| Neurospora crassa OR74A hypothetical protein (NCU01452.1) partial mRNA Length = 1014 Score = 42.1 bits (21), Expect = 2.1 Identities = 108/137 (78%) Strand = Plus / Plus Query: 389 ttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcat 448 |||||| | ||||||||| | || ||||| | ||||||||||| ||||||||||| | Sbjct: 556 ttcacctccgacaagctccgctcgcttgtccgcaagtggcagactctcattgaggccaac 615 Query: 449 gtcgatgtgaagaccactgacaattacatgctccgcatgtttgccattggcttcaccaag 508 || || |||||||| ||| | ||| | |||||| | || ||||||| |||||||||| Sbjct: 616 atcaccgtcaagaccaccgacgactacctcctccgcctcttcgccattgccttcaccaag 675 Query: 509 agacgcccaaaccaggt 525 | ||||| |||||||| Sbjct: 676 cgccgccctaaccaggt 692
>ref|XM_534831.2| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 1 (LOC608748), mRNA Length = 886 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 422 aagtggcagaccctcattgaggctcatgtcgatgtgaagac 462 |||||||||||| | ||||| |||||||| ||||| ||||| Sbjct: 374 aagtggcagaccatgattgaagctcatgttgatgtaaagac 414
>ref|XM_748992.1| Aspergillus fumigatus Af293 ribosomal protein S0.e.B, cytosolic (Afu5g05450) partial mRNA Length = 771 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 499 cttcaccaagagacgcccaaaccag 523 |||||||||||||||||| |||||| Sbjct: 423 cttcaccaagagacgcccgaaccag 447
>ref|XM_446571.1| Candida glabrata CBS138, CAGL0G04851g partial mRNA Length = 1101 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 gaagggtagcaagaagaaggc 135 ||||||||||||||||||||| Sbjct: 990 gaagggtagcaagaagaaggc 1010
>emb|Z32681.1|CEF56F3 Caenorhabditis elegans Cosmid F56F3, complete sequence Length = 29039 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 125 aagaagaaggccgtggatccgttcaccaagaagcagtggtatgacatcaaggc 177 |||||||||||||||||||| ||| || ||| | ||||| ||||||||||| Sbjct: 23554 aagaagaaggccgtggatccattctcccgcaaggaatggtacgacatcaaggc 23606
>gb|BC047260.1| Xenopus laevis ribosomal protein S3a, mRNA (cDNA clone MGC:53968 IMAGE:5570910), complete cds Length = 867 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 425 tggcagaccctcattgaggctcatgtcgatgtgaagaccac 465 ||||||||| | ||||| || ||||| |||||||||||||| Sbjct: 360 tggcagaccatgattgaagcccatgttgatgtgaagaccac 400
>ref|NM_001008074.1| Xenopus tropicalis rps3a protein (rps3a), mRNA Length = 922 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 425 tggcagaccctcattgaggctcatgtcgatgtgaagaccac 465 ||||||||| | ||||| || ||||| |||||||||||||| Sbjct: 356 tggcagaccatgattgaagcacatgttgatgtgaagaccac 396
>gb|BC080969.1| Xenopus tropicalis rps3a protein, mRNA (cDNA clone MGC:79742 IMAGE:6983416), complete cds Length = 922 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 425 tggcagaccctcattgaggctcatgtcgatgtgaagaccac 465 ||||||||| | ||||| || ||||| |||||||||||||| Sbjct: 356 tggcagaccatgattgaagcacatgttgatgtgaagaccac 396
>emb|BX067685.1|CNS09OE1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC51BH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 887 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 gaaggccgtggatccgttcac 150 ||||||||||||||||||||| Sbjct: 68 gaaggccgtggatccgttcac 88
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 125 aagaagaaggccgtggatccgttcaccaagaagcagtggtatgacatcaaggc 177 |||||||||| | | || || |||||||||||| | |||| |||||||||||| Sbjct: 772733 aagaagaaggtcatcgaccctttcaccaagaaggaatggtttgacatcaaggc 772681
>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence Length = 992211 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 gaagggtagcaagaagaaggc 135 ||||||||||||||||||||| Sbjct: 462782 gaagggtagcaagaagaaggc 462762
>emb|BX294022.1|NCB11C21 Neurospora crassa DNA linkage group V BAC clone B11C21 Length = 62209 Score = 42.1 bits (21), Expect = 2.1 Identities = 108/137 (78%) Strand = Plus / Minus Query: 389 ttcaccactgacaagctcaggtctcttgtgaggaagtggcagaccctcattgaggctcat 448 |||||| | ||||||||| | || ||||| | ||||||||||| ||||||||||| | Sbjct: 41524 ttcacctccgacaagctccgctcgcttgtccgcaagtggcagactctcattgaggccaac 41465 Query: 449 gtcgatgtgaagaccactgacaattacatgctccgcatgtttgccattggcttcaccaag 508 || || |||||||| ||| | ||| | |||||| | || ||||||| |||||||||| Sbjct: 41464 atcaccgtcaagaccaccgacgactacctcctccgcctcttcgccattgccttcaccaag 41405 Query: 509 agacgcccaaaccaggt 525 | ||||| |||||||| Sbjct: 41404 cgccgccctaaccaggt 41388
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 Length = 1913118 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 88 caggaacaagcgcatctccaaggggaggaagggtagcaagaagaaggccgtggatcc 144 ||||||||||||| | || ||||| | |||||||| |||||||| | |||| ||||| Sbjct: 1909636 caggaacaagcgcttgtcgaagggcaagaagggtatcaagaagaggaccgttgatcc 1909692
>gb|DQ066297.1| Ixodes scapularis isolate is-all-378 40S ribosomal protein S3a mRNA, complete cds Length = 813 Score = 42.1 bits (21), Expect = 2.1 Identities = 72/89 (80%) Strand = Plus / Plus Query: 421 gaagtggcagaccctcattgaggctcatgtcgatgtgaagaccactgacaattacatgct 480 |||||||||||| || |||||||| |||||||||| ||| || ||| ||| |||| Sbjct: 345 gaagtggcagacgctgattgaggccacggtcgatgtgaggacaacggacggctacctgct 404 Query: 481 ccgcatgtttgccattggcttcaccaaga 509 ||||||||| ||| ||||||||||||| Sbjct: 405 ccgcatgttctgcatcggcttcaccaaga 433
>gb|AF379639.1|AF379639 Heliothis virescens ribosomal protein S3a mRNA, partial cds Length = 794 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 380 ggcatggatttcaccactgacaagctcag 408 |||||||| ||||||||||||||||||| Sbjct: 271 ggcatggacctcaccactgacaagctcag 299
>ref|NM_065509.3| Caenorhabditis elegans Ribosomal Protein, Small subunit family member (rps-1) (rps-1) mRNA, complete cds Length = 838 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 125 aagaagaaggccgtggatccgttcaccaagaagcagtggtatgacatcaaggc 177 |||||||||||||||||||| ||| || ||| | ||||| ||||||||||| Sbjct: 75 aagaagaaggccgtggatccattctcccgcaaggaatggtacgacatcaaggc 127
>ref|XM_392119.2| PREDICTED: Apis mellifera similar to Phosphatidylinositol 3-kinase regulatory alpha subunit (PI3-kinase p85-alpha subunit) (PtdIns-3-kinase p85-alpha) (PI3K) (LOC408577), mRNA Length = 4102 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 465 ctgacaattacatgctccgca 485 ||||||||||||||||||||| Sbjct: 260 ctgacaattacatgctccgca 280
>gb|AF429977.1| Spodoptera frugiperda ribosomal protein S3A mRNA, complete cds Length = 873 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 380 ggcatggatttcaccactgacaagctcag 408 |||||||| ||||||||||||||||||| Sbjct: 337 ggcatggacctcaccactgacaagctcag 365
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 ctccacccgccgcagcgccgc 54 ||||||||||||||||||||| Sbjct: 516397 ctccacccgccgcagcgccgc 516417 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ccacccgccgcagcgccgcc 55 |||||||||||||||||||| Sbjct: 3214356 ccacccgccgcagcgccgcc 3214375
>gb|AF056328.1|AF056328 Oryzias latipes V-Fos transformation effector (fte-1) mRNA, complete cds Length = 873 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 421 gaagtggcagaccctcattgaggctcatgtcgatgtgaagaccactgac 469 ||||||||||||| | ||||| || || || || ||||||||||||||| Sbjct: 361 gaagtggcagaccatgattgaagcccacgtggacgtgaagaccactgac 409
>emb|CR760859.2| Xenopus tropicalis finished cDNA, clone TTpA010n05 Length = 863 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 425 tggcagaccctcattgaggctcatgtcgatgtgaagaccac 465 ||||||||| | ||||| || ||||| |||||||||||||| Sbjct: 353 tggcagaccatgattgaagcacatgttgatgtgaagaccac 393
>gb|AC113456.9| Mus musculus chromosome 1, clone RP23-257E16, complete sequence Length = 174902 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 399 acaagctcaggtctcttgtgaggaagtgg 427 |||||| ||||||||||| |||||||||| Sbjct: 152024 acaagcccaggtctcttgagaggaagtgg 151996
>gb|M84716.1|RATVFOSPR R.norvegicus putative v-fos transformation effector protein (Fte-1) mRNA, complete cds Length = 860 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 422 aagtggcagaccctcattgaggctcatgtcgatgtgaagac 462 |||||||||||| | ||||| |||||||| || |||||||| Sbjct: 364 aagtggcagaccatgattgaagctcatgttgacgtgaagac 404
>ref|XM_475184.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ccacccgccgcagcgccgcc 55 |||||||||||||||||||| Sbjct: 1288 ccacccgccgcagcgccgcc 1269
>gb|DQ214673.1| Taeniopygia guttata clone 0061P0008B04 ribosomal protein S3a-like mRNA, complete sequence Length = 922 Score = 40.1 bits (20), Expect = 8.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 76 catggcggtcggcaggaacaagcgcatctccaaggg 111 |||||||||||| | |||||||||| || ||||||| Sbjct: 43 catggcggtcgggaagaacaagcgcctcaccaaggg 78
>gb|DQ214671.1| Taeniopygia guttata clone 0058P0045E12 ribosomal protein S3a-like mRNA, complete sequence Length = 893 Score = 40.1 bits (20), Expect = 8.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 76 catggcggtcggcaggaacaagcgcatctccaaggg 111 |||||||||||| | |||||||||| || ||||||| Sbjct: 40 catggcggtcgggaagaacaagcgcctcaccaaggg 75
>gb|DQ214668.1| Taeniopygia guttata clone 0063P0025A12 ribosomal protein S3a-like mRNA, complete sequence Length = 630 Score = 40.1 bits (20), Expect = 8.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 76 catggcggtcggcaggaacaagcgcatctccaaggg 111 |||||||||||| | |||||||||| || ||||||| Sbjct: 24 catggcggtcgggaagaacaagcgcctcaccaaggg 59
>ref|XM_473036.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1038 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 184 gctcttcaccagccgcaacgtcggcaag 211 ||||||| || ||||||||||||||||| Sbjct: 984 gctcttctccggccgcaacgtcggcaag 1011
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 caccagccgcaacgtcggca 209 |||||||||||||||||||| Sbjct: 301181 caccagccgcaacgtcggca 301162
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 caccagccgcaacgtcggca 209 |||||||||||||||||||| Sbjct: 5566815 caccagccgcaacgtcggca 5566834
>ref|XM_612939.2| PREDICTED: Bos taurus similar to catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein) (LOC533509), mRNA Length = 2298 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 479 ctccgcatgtttgccattggcttcacca 506 |||||||| |||||||||||| |||||| Sbjct: 1362 ctccgcatctttgccattggcctcacca 1335
>gb|AC105773.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1562_H01, complete sequence Length = 88352 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ccacccgccgcagcgccgcc 55 |||||||||||||||||||| Sbjct: 47708 ccacccgccgcagcgccgcc 47727
>gb|AC119954.12| Mus musculus chromosome 1, clone RP24-450P2, complete sequence Length = 179212 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 atttcaccactgacaagctc 406 |||||||||||||||||||| Sbjct: 143375 atttcaccactgacaagctc 143356
>ref|XM_875949.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 8 (LOC613769), mRNA Length = 900 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaag 97 |||||||||||||||| ||||||| Sbjct: 49 accatggcggtcggcaagaacaag 72
>ref|XM_875867.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 7 (LOC613769), mRNA Length = 879 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaag 97 |||||||||||||||| ||||||| Sbjct: 39 accatggcggtcggcaagaacaag 62
>ref|XM_875801.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 6 (LOC613769), mRNA Length = 884 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaag 97 |||||||||||||||| ||||||| Sbjct: 39 accatggcggtcggcaagaacaag 62
>ref|XM_875730.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 5 (LOC613769), mRNA Length = 871 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaag 97 |||||||||||||||| ||||||| Sbjct: 20 accatggcggtcggcaagaacaag 43
>ref|XM_875654.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 4 (LOC613769), mRNA Length = 890 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaag 97 |||||||||||||||| ||||||| Sbjct: 39 accatggcggtcggcaagaacaag 62
>ref|XM_875583.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 3 (LOC613769), mRNA Length = 878 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaag 97 |||||||||||||||| ||||||| Sbjct: 39 accatggcggtcggcaagaacaag 62
>ref|XM_865235.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 2 (LOC613769), mRNA Length = 876 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 accatggcggtcggcaggaacaag 97 |||||||||||||||| ||||||| Sbjct: 39 accatggcggtcggcaagaacaag 62
>gb|AC140314.2| Mus musculus BAC clone RP23-395L3 from chromosome 12, complete sequence Length = 191322 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 575 aagatggttgagatcatggt 594 |||||||||||||||||||| Sbjct: 136931 aagatggttgagatcatggt 136950
>gb|AC160529.6| Mus musculus chromosome 1, clone RP24-141F19, complete sequence Length = 167687 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 atttcaccactgacaagctc 406 |||||||||||||||||||| Sbjct: 89646 atttcaccactgacaagctc 89665
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ctccacccgccgcagcgccg 53 |||||||||||||||||||| Sbjct: 4627694 ctccacccgccgcagcgccg 4627713
>gb|AC126433.3| Mus musculus BAC clone RP24-468I23 from chromosome 17, complete sequence Length = 165036 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 gcagaccctcattgaggctcatgt 450 ||||||||||||| |||||||||| Sbjct: 49123 gcagaccctcattcaggctcatgt 49100
>gb|AC109612.22| Mus musculus strain C57BL/6J clone rp23-37i3 map 17, complete sequence Length = 179382 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 gccattggcttcaccaagag 510 |||||||||||||||||||| Sbjct: 109671 gccattggcttcaccaagag 109690
>ref|XM_505043.1| Yarrowia lipolytica CLIB122, YALI0F05676g predicted mRNA Length = 744 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 acgtcggcaagaccctcgtg 220 |||||||||||||||||||| Sbjct: 101 acgtcggcaagaccctcgtg 120
>ref|XM_778340.1| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal protein S3a (LOC578151), mRNA Length = 764 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 566 atccgccggaagatggttgagatcatgg 593 |||||| |||||||| |||||||||||| Sbjct: 256 atccgcaggaagatgattgagatcatgg 283
>gb|AC104783.3| Homo sapiens BAC clone RP11-36G9 from 4, complete sequence Length = 28480 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 atgaatgtcctcacaaactt 375 |||||||||||||||||||| Sbjct: 4827 atgaatgtcctcacaaactt 4846
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 184 gctcttcaccagccgcaacgtcggcaag 211 ||||||| || ||||||||||||||||| Sbjct: 24833587 gctcttctccggccgcaacgtcggcaag 24833560
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ccacccgccgcagcgccgcc 55 |||||||||||||||||||| Sbjct: 18742305 ccacccgccgcagcgccgcc 18742324
>emb|AJ563455.1|CGI563455 Crassostrea gigas partial mRNA for ribosomal protein S3a (rps3a gene) Length = 792 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 441 aggctcatgtcgatgtgaagaccactga 468 |||||||||| ||||| ||||||||||| Sbjct: 368 aggctcatgttgatgtcaagaccactga 395
>dbj|AK109382.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-F02, full insert sequence Length = 1343 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 184 gctcttcaccagccgcaacgtcggcaag 211 ||||||| || ||||||||||||||||| Sbjct: 1092 gctcttctccggccgcaacgtcggcaag 1119
>dbj|AK069136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008C06, full insert sequence Length = 1269 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 184 gctcttcaccagccgcaacgtcggcaag 211 ||||||| || ||||||||||||||||| Sbjct: 1030 gctcttctccggccgcaacgtcggcaag 1057
>emb|AJ249414.1|MMU249414 Mus musculus partial PI3Kgamma gene for phosphoinositide 3-kinase gamma, exons 3-4 Length = 1777 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 aagatggttgagatcatggt 594 |||||||||||||||||||| Sbjct: 934 aagatggttgagatcatggt 915
>dbj|AB092486.1| Gallus gallus gene for iron-responsive element-binding protein, exon sequence Length = 6946 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gaatgtcctcacaaacttctgggg 381 ||||||||||| |||||||||||| Sbjct: 3631 gaatgtcctcataaacttctgggg 3654
>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138585 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 ctccacccgccgcagcgccgccac 57 ||||||||||||| |||||||||| Sbjct: 77037 ctccacccgccgccgcgccgccac 77014
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence Length = 170765 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 184 gctcttcaccagccgcaacgtcggcaag 211 ||||||| || ||||||||||||||||| Sbjct: 95303 gctcttctccggccgcaacgtcggcaag 95276
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 acgtcggcaagaccctcgtg 220 |||||||||||||||||||| Sbjct: 843013 acgtcggcaagaccctcgtg 842994 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,438,787 Number of Sequences: 3902068 Number of extensions: 4438787 Number of successful extensions: 81837 Number of sequences better than 10.0: 227 Number of HSP's better than 10.0 without gapping: 226 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 80850 Number of HSP's gapped (non-prelim): 949 length of query: 600 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 577 effective length of database: 17,143,297,704 effective search space: 9891682775208 effective search space used: 9891682775208 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
