Clone Name | bart56b01 |
---|---|
Clone Library Name | barley_pub |
>gb|AF521895.1|AF521896S2 Streptomyces hygroscopicus ansamycin biosynthesis gene cluster, partial sequence Length = 12420 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 382 tggtcgacgcgtacgacgacga 403 |||||||||||||||||||||| Sbjct: 5875 tggtcgacgcgtacgacgacga 5854
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 gacgcgtacgacgacgacgac 407 ||||||||||||||||||||| Sbjct: 1291118 gacgcgtacgacgacgacgac 1291098
>ref|XM_571701.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNF04440) partial mRNA Length = 3742 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 gacgcgtacgacgacgacgac 407 ||||||||||||||||||||| Sbjct: 10 gacgcgtacgacgacgacgac 30
>emb|BX040662.1|CNS093JE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC11CE02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 891 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 gaccgcgtgctccgccggtgc 265 ||||||||||||||||||||| Sbjct: 28 gaccgcgtgctccgccggtgc 48
>emb|BX063934.1|CNS09LHU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC46AB01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 957 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 gaccgcgtgctccgccggtg 264 |||||||||||||||||||| Sbjct: 23 gaccgcgtgctccgccggtg 42
>emb|BX004819.11| Zebrafish DNA sequence from clone CH211-208B16 in linkage group 8, complete sequence Length = 234864 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 agcttctcaggatggaagcg 332 |||||||||||||||||||| Sbjct: 230792 agcttctcaggatggaagcg 230773
>emb|CR361554.35| Zebrafish DNA sequence from clone CH211-222L15 in linkage group 6, complete sequence Length = 187638 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 agcttctcaggatggaagcg 332 |||||||||||||||||||| Sbjct: 187209 agcttctcaggatggaagcg 187190 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,107,680 Number of Sequences: 3902068 Number of extensions: 3107680 Number of successful extensions: 79907 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79884 Number of HSP's gapped (non-prelim): 23 length of query: 584 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 561 effective length of database: 17,143,297,704 effective search space: 9617390011944 effective search space used: 9617390011944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)