>ref|XM_807157.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506637.20) partial mRNA
          Length = 1071

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 124 agatgaagaaggccgggaggaa 145
           ||||||||||||||||||||||
Sbjct: 416 agatgaagaaggccgggaggaa 437

>ref|XM_807159.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506637.40) partial mRNA
          Length = 1071

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 124 agatgaagaaggccgggaggaa 145
           ||||||||||||||||||||||
Sbjct: 416 agatgaagaaggccgggaggaa 437

>gb|AF331163.1| Gossypium hirsutum delta-12 fatty acid desaturase (FAD2) gene,
            complete cds
          Length = 7914

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 204  ctgcttcctctcttggtcctcg 225
            ||||||||||||||||||||||
Sbjct: 7152 ctgcttcctctcttggtcctcg 7173

>gb|AY279314.1| Gossypium hirsutum delta-12 fatty acid desaturase 2 (FAD2-4) gene,
            complete cds
          Length = 8612

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 204  ctgcttcctctcttggtcctcg 225
            ||||||||||||||||||||||
Sbjct: 6627 ctgcttcctctcttggtcctcg 6648

>gb|AC108428.13| Mus musculus chromosome 3, clone RP23-145M5, complete sequence
          Length = 200331

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 73    ggaggaactaagagctactaagtga 97
             |||||||||| ||||||||||||||
Sbjct: 73644 ggaggaactaggagctactaagtga 73668

>ref|XM_985954.1| PREDICTED: Mus musculus ring finger and KH domain containing 2,
           transcript variant 1 (Rkhd2), mRNA
          Length = 3402

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 169 gcagaggaggaggagcggccgtcgc 193
           |||||||||||||| ||||||||||
Sbjct: 49  gcagaggaggaggaccggccgtcgc 73

>gb|AC134447.2| Mus musculus BAC clone RP24-186D1 from chromosome 18, complete sequence
          Length = 179514

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 169   gcagaggaggaggagcggccgtcgc 193
             |||||||||||||| ||||||||||
Sbjct: 99711 gcagaggaggaggaccggccgtcgc 99735

>ref|NM_001039214.1| Mus musculus ring finger and KH domain containing 2 (Rkhd2), mRNA
          Length = 2052

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 169 gcagaggaggaggagcggccgtcgc 193
           |||||||||||||| ||||||||||
Sbjct: 644 gcagaggaggaggaccggccgtcgc 668

>dbj|AK133686.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length
           enriched library, clone:5330437G16 product:hypothetical
           Proline-rich region profile/Alanine-rich region
           profile/Glutamic acid-rich region profile containing
           protein, full insert sequence
          Length = 2052

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 169 gcagaggaggaggagcggccgtcgc 193
           |||||||||||||| ||||||||||
Sbjct: 644 gcagaggaggaggaccggccgtcgc 668

>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
              sequence
          Length = 2105742

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     ctagctggtgagtgatcaag 47
              ||||||||||||||||||||
Sbjct: 630388 ctagctggtgagtgatcaag 630369

>gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-434O14, complete
             sequence
          Length = 191358

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 160   aggctatgagcagaggaggaggag 183
             |||| |||||||||||||||||||
Sbjct: 84763 aggccatgagcagaggaggaggag 84786

>gb|AC101677.8| Mus musculus chromosome 10, clone RP23-138N1, complete sequence
          Length = 206087

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 426   gccaacagagatcacaaaat 445
             ||||||||||||||||||||
Sbjct: 70380 gccaacagagatcacaaaat 70361

>emb|AL513220.9| Human DNA sequence from clone RP11-566C13 on chromosome 1 Contains the
             5' end of the gene for nucleolar GTPase (HUMAUANTIG), the
             gene for a novel protein (FLJ40906) and a CpG island,
             complete sequence
          Length = 94638

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 275   ggccagcattgcccaagatggaga 298
             ||||||||||| ||||||||||||
Sbjct: 74516 ggccagcattggccaagatggaga 74539

>emb|AL355591.13| Human DNA sequence from clone RP11-300B7 on chromosome 10 Contains a
             CpG island, complete sequence
          Length = 129839

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   agggggtgtagagggtgcaa 333
             ||||||||||||||||||||
Sbjct: 22273 agggggtgtagagggtgcaa 22292

>emb|AL022576.2|HS20J23 Human DNA sequence from clone RP1-20J23 on chromosome Xq26.2-27.2
             Contains a ras-related C3 botulinum toxin substrate 1 (rho
             family, small GTP binding protein Rac1) (RAC1) pseudogene
             (LOC286472) and a CpG island, complete sequence
          Length = 137111

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 83    agagctactaagtgatcaagccag 106
             |||||||||||||| |||||||||
Sbjct: 58799 agagctactaagtggtcaagccag 58776

>gb|DP000042.1| Lemur catta target 106 genomic scaffold
          Length = 452647

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  ctgcttcctctcttggtcct 223
            ||||||||||||||||||||
Sbjct: 8947 ctgcttcctctcttggtcct 8966

>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    gaagaaggccgggaggaacg 147
              ||||||||||||||||||||
Sbjct: 162642 gaagaaggccgggaggaacg 162623

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 336     tggcagccgcggcaacaacaactt 359
               ||||||| ||||||||||||||||
Sbjct: 8474310 tggcagcggcggcaacaacaactt 8474333

>gb|AC158631.6| Mus musculus 10 BAC RP23-424I1 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 206425

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 426   gccaacagagatcacaaaat 445
             ||||||||||||||||||||
Sbjct: 13789 gccaacagagatcacaaaat 13808

>gb|AF118441.1|AF118441 Mus musculus Pax-4 gene, promoter region
          Length = 2539

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 160  aggctatgagcagaggaggaggag 183
            |||| |||||||||||||||||||
Sbjct: 2449 aggccatgagcagaggaggaggag 2426

>gb|AF304868.1|AF304868 Mus musculus PAX4 (Pax4) gene, exons 1, 2, and 3 and partial cds
          Length = 7751

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 160  aggctatgagcagaggaggaggag 183
            |||| |||||||||||||||||||
Sbjct: 5021 aggccatgagcagaggaggaggag 4998

>dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0092H22
          Length = 165194

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 336   tggcagccgcggcaacaacaactt 359
             ||||||| ||||||||||||||||
Sbjct: 89011 tggcagcggcggcaacaacaactt 89034

>gb|AY112646.1| Zea mays CL10123_1 mRNA sequence
          Length = 623

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 255 cagcttattcacgttggagaggcc 278
           |||||||||||| |||||||||||
Sbjct: 461 cagcttattcacattggagaggcc 484


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,337,415
Number of Sequences: 3902068
Number of extensions: 5337415
Number of successful extensions: 97335
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97217
Number of HSP's gapped (non-prelim): 118
length of query: 570
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 547
effective length of database: 17,143,297,704
effective search space: 9377383844088
effective search space used: 9377383844088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)