Clone Name | bart56a01 |
---|---|
Clone Library Name | barley_pub |
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 872 bits (440), Expect = 0.0 Identities = 467/476 (98%), Gaps = 1/476 (0%) Strand = Plus / Plus Query: 36 ggcggcgaccatggcgccnaggtcagacctcctcgccgcgctagcgttggccctcctcgc 95 |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 16 ggcggcgaccatggcgccaaggtcagacctcctcgccgcgctggcgttggccctcctcgc 75 Query: 96 cgcgagcgtccttagtacgggggccaaggccgacttcgacgaccagttcgaggtgatcgg 155 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 cgcgagcgtccttagtacgggggccaaggccgacttcgacgaccagttcgaggtgatcgg 135 Query: 156 cgaccgcgaccacatcgggtaccgggacgacggcnacgacaagggccaggagttctcgct 215 |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 136 cgaccgcgaccacatcgggtaccgggacgacggcaacgacaaggggcaggagttctcgct 195 Query: 216 ggagctcgaccaggagtccggctccggcttcaagtccaaggccaagtacctcttcggcga 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 ggagctcgaccaggagtccggctccggcttcaagtccaaggccaagtacctcttcggcga 255 Query: 276 gttccaggtccggatgaagctcgtcgacggcaactccgccggcaccgtcacctccttcta 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 gttccaggtccggatgaagctcgtcgacggcaactccgccggcaccgtcacctccttcta 315 Query: 336 cctgacctccggcgagagcgccacccacgacgagatcgacatcgagttcatgggaaactc 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 316 cctgacctccggcgagagcgccacccacgacgagatcgacatcgagttcatgggcaactc 375 Query: 396 gagcggcgacccctacgtgatgaacaccaacgtctgggccagcggcgacggcnagaagga 455 ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 376 gagcggcgacccctacgtgatgaacaccaacgtgtgggccagcggcgacggcaagaagga 435 Query: 456 gcaccagttctacctctggttcgacccctccgccgactt-cacacctacnagatca 510 ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| Sbjct: 436 gcaccagttctacctctggttcgacccctccgccgacttccacacctacaagatca 491
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 678 bits (342), Expect = 0.0 Identities = 385/399 (96%), Gaps = 1/399 (0%) Strand = Plus / Plus Query: 113 cgggggccaaggccgacttcgacgaccagttcgaggtgatcggcgaccgcgaccacatcg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102 cgggggccaaggccgacttcgacgaccagttcgaggtgatcggcgaccgcgaccacatcg 161 Query: 173 ggtaccgggacgacggcnacgacaagggccaggagttctcgctggagctcgaccaggagt 232 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 162 ggtaccgggacgacggcaaggacaagggccaggagttctcgctggagctcgaccaggagt 221 Query: 233 ccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatga 292 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 222 ccggctccggcttcaagtccaaggccaagtacctcttcggcgagttcgaggtcaagatga 281 Query: 293 agctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgaga 352 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 282 agctcgtcgacggcaactccgccggcacagtcacctccttctacctgacttccggcgaga 341 Query: 353 gcgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacg 412 |||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 342 gcgcgacccacgacgagatcgacatcgagttcatgggcaactccagcggcgacccctacg 401 Query: 413 tgatgaacaccaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctct 472 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 402 tgatgaacaccaacgtgtgggccagcggcgacggcaagaaggagcaccagttctacctct 461 Query: 473 ggttcgacccctccgccgactt-cacacctacnagatca 510 |||||||||||||||||||||| ||||||||| |||||| Sbjct: 462 ggttcgacccctccgccgacttccacacctacaagatca 500
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 468 bits (236), Expect = e-129 Identities = 353/391 (90%), Gaps = 4/391 (1%) Strand = Plus / Plus Query: 121 aaggccgacttcgacgaccagttcgaggtgatcggcgaccgcgaccacatcgggtaccgg 180 ||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| | Sbjct: 121 aaggccgacttcgacgaccagtttgaggtgattggcgaccgtgaccacatcgggtacaag 180 Query: 181 gacgacggcnacgacaagggccaggagttctcgctggagctcgaccaggagtccggctcc 240 ||||||||| ||| | || ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 181 gacgacggcaacggc---gggcaggagttctctctggagctcgaccaggaatccggctcc 237 Query: 241 ggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaagctcgtc 300 |||||||| |||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 238 ggcttcaaatccaagaacaagtacctcttcggcgagttcagcgtccggatgaagctcgtc 297 Query: 301 gacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgccacc 360 ||||||||||||||||||||||||||||||||||| ||||| ||||| || ||| ||| Sbjct: 298 gacggcaactccgccggcaccgtcacctccttctatctgacgtccggggaaagcagtacc 357 Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatgaac 420 ||||| ||||||||||| ||||||||||| ||||||||||| | ||||||||||||||| Sbjct: 358 cacgatgagatcgacattgagttcatggggaactcgagcgggcagccctacgtgatgaac 417 Query: 421 accaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctctggttcgac 480 |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 418 accaacgtgtgggccagcggcgacggcaagaaggagcaccagttctacctctggttcgat 477 Query: 481 ccctccgccgactt-cacacctacnagatca 510 ||||||||||| || ||||||||| |||||| Sbjct: 478 ccctccgccgatttccacacctacaagatca 508
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 339 bits (171), Expect = 5e-90 Identities = 251/277 (90%), Gaps = 1/277 (0%) Strand = Plus / Plus Query: 234 cggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaa 293 |||||||||||||| ||||||| ||||||||||| |||||||||| |||| |||||| Sbjct: 238 cggctccggcttcagctccaaggacaagtacctctacggcgagttcagcgtccagatgaa 297 Query: 294 gctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagag 353 |||| ||| ||||||||||||||||||||||||||||||||||||||| || || ||| | Sbjct: 298 gctcatcggcggcaactccgccggcaccgtcacctccttctacctgacgtctggggaggg 357 Query: 354 cgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgt 413 || | ||| |||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 358 cgacggccatgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctacgt 417 Query: 414 gatgaacaccaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctctg 473 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 418 gatgaacaccaacgtctgggccagcggcgacggcaagaaggagcaccagttctacctctg 477 Query: 474 gttcgacccctccgccgactt-cacacctacnagatc 509 |||||||||| |||||||||| ||||||||| ||||| Sbjct: 478 gttcgaccccaccgccgacttccacacctacaagatc 514
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 339 bits (171), Expect = 5e-90 Identities = 251/277 (90%), Gaps = 1/277 (0%) Strand = Plus / Plus Query: 234 cggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaa 293 |||||||||||||| ||||||| ||||||||||| |||||||||| |||| |||||| Sbjct: 227 cggctccggcttcagctccaaggacaagtacctctacggcgagttcagcgtccagatgaa 286 Query: 294 gctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagag 353 |||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| ||| | Sbjct: 287 gctcatcggcggcaactccgccggcaccgtcacctccttctacctgacgtccggggaggg 346 Query: 354 cgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgt 413 || | ||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 347 cgacgggcacgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctacgt 406 Query: 414 gatgaacaccaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctctg 473 ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 407 gatgaacaccaacgtgtgggccagcggcgacggcaagaaggagcaccagttctacctctg 466 Query: 474 gttcgacccctccgccgactt-cacacctacnagatc 509 |||||||||| |||||||||| ||||||||| ||||| Sbjct: 467 gttcgaccccaccgccgacttccacacctacaagatc 503
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 331 bits (167), Expect = 1e-87 Identities = 250/277 (90%), Gaps = 1/277 (0%) Strand = Plus / Plus Query: 234 cggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaa 293 |||||||||||||| ||||||| ||||||||||| |||||||||| |||| |||||| Sbjct: 227 cggctccggcttcagctccaaggacaagtacctctacggcgagttcagcgtccagatgaa 286 Query: 294 gctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagag 353 |||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| ||| | Sbjct: 287 gctcatcggcggcaactccgccggcaccgtcacctccttctacctgacgtccggggaggg 346 Query: 354 cgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgt 413 || | ||||||||||||||||||||||||||||| ||| |||||||||||||| || Sbjct: 347 cgacgggcacgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctatgt 406 Query: 414 gatgaacaccaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctctg 473 ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 407 gatgaacaccaacgtgtgggccagcggcgacggcaagaaggagcaccagttctacctctg 466 Query: 474 gttcgacccctccgccgactt-cacacctacnagatc 509 |||||||||| |||||||||| ||||||||| ||||| Sbjct: 467 gttcgaccccaccgccgacttccacacctacaagatc 503
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 315 bits (159), Expect = 8e-83 Identities = 248/277 (89%), Gaps = 1/277 (0%) Strand = Plus / Plus Query: 234 cggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaa 293 |||||||||||||| ||||||| ||||||||||| |||||||||| |||| |||||| Sbjct: 226 cggctccggcttcagctccaaggacaagtacctctacggcgagttcagcgtccagatgaa 285 Query: 294 gctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagag 353 |||| ||| ||||||||||||||||||||||||||||||||||||||| || || ||| | Sbjct: 286 gctcatcggcggcaactccgccggcaccgtcacctccttctacctgacgtctggggaggg 345 Query: 354 cgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgt 413 || | ||| |||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 346 cgacggccatgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctacgt 405 Query: 414 gatgaacaccaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctctg 473 ||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 406 gatgaacaccaacgtgtgggccggcggcgacgggaagaaggagcaccagttctacctctg 465 Query: 474 gttcgacccctccgccgactt-cacacctacnagatc 509 |||||||||| |||||||||| ||||||||| ||||| Sbjct: 466 gttcgaccccaccgccgacttccacacctacaagatc 502
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 297 bits (150), Expect = 2e-77 Identities = 248/280 (88%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 291 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 224 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 283 Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 351 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 343 Query: 352 agcgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 411 ||| | |||||||||||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 344 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 403 Query: 412 gtgatgaacaccaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctc 471 || |||||||||||||||||||| | ||||||||| ||||||||||||||||||||||| Sbjct: 404 gtcatgaacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctc 463 Query: 472 tggttcgacccctccgccgactt-cacacctacnagatca 510 |||||||||||| |||||||||| ||||||||| |||||| Sbjct: 464 tggttcgaccccaccgccgacttccacacctacaagatca 503
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 297 bits (150), Expect = 2e-77 Identities = 248/280 (88%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 291 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 229 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 288 Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 351 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 348 Query: 352 agcgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 411 ||| | |||||||||||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 349 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 408 Query: 412 gtgatgaacaccaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctc 471 || |||||||||||||||||||| | ||||||||| ||||||||||||||||||||||| Sbjct: 409 gtcatgaacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctc 468 Query: 472 tggttcgacccctccgccgactt-cacacctacnagatca 510 |||||||||||| |||||||||| ||||||||| |||||| Sbjct: 469 tggttcgaccccaccgccgacttccacacctacaagatca 508
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 297 bits (150), Expect = 2e-77 Identities = 248/280 (88%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 291 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 8321897 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 8321956 Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 351 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 8321957 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 8322016 Query: 352 agcgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 411 ||| | |||||||||||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 8322017 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 8322076 Query: 412 gtgatgaacaccaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctc 471 || |||||||||||||||||||| | ||||||||| ||||||||||||||||||||||| Sbjct: 8322077 gtcatgaacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctc 8322136 Query: 472 tggttcgacccctccgccgactt-cacacctacnagatca 510 |||||||||||| |||||||||| ||||||||| |||||| Sbjct: 8322137 tggttcgaccccaccgccgacttccacacctacaagatca 8322176 Score = 54.0 bits (27), Expect = 5e-04 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 454 gagcaccagttctacctctggttcgacccctccgccgactt-cacacctac 503 ||||| |||||| |||||||||||||||| |||||||||| ||||||||| Sbjct: 8378907 gagcagcagttccgcctctggttcgaccccaccgccgacttccacacctac 8378857 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Minus Query: 289 atgaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 |||| |||||||| | |||||||||||||||||||||| || ||||| Sbjct: 8379189 atgatgctcgtcgccaacaactccgccggcaccgtcaccaccctctac 8379142
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 297 bits (150), Expect = 2e-77 Identities = 248/280 (88%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 291 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 220 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 279 Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 351 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 280 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 339 Query: 352 agcgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 411 ||| | |||||||||||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 340 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 399 Query: 412 gtgatgaacaccaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctc 471 || |||||||||||||||||||| | ||||||||| ||||||||||||||||||||||| Sbjct: 400 gtcatgaacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctc 459 Query: 472 tggttcgacccctccgccgactt-cacacctacnagatca 510 |||||||||||| |||||||||| ||||||||| |||||| Sbjct: 460 tggttcgaccccaccgccgacttccacacctacaagatca 499
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 297 bits (150), Expect = 2e-77 Identities = 248/280 (88%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 291 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 62006 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 62065 Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 351 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 62066 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 62125 Query: 352 agcgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 411 ||| | |||||||||||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 62126 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 62185 Query: 412 gtgatgaacaccaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctc 471 || |||||||||||||||||||| | ||||||||| ||||||||||||||||||||||| Sbjct: 62186 gtcatgaacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctc 62245 Query: 472 tggttcgacccctccgccgactt-cacacctacnagatca 510 |||||||||||| |||||||||| ||||||||| |||||| Sbjct: 62246 tggttcgaccccaccgccgacttccacacctacaagatca 62285 Score = 54.0 bits (27), Expect = 5e-04 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 454 gagcaccagttctacctctggttcgacccctccgccgactt-cacacctac 503 ||||| |||||| |||||||||||||||| |||||||||| ||||||||| Sbjct: 119016 gagcagcagttccgcctctggttcgaccccaccgccgacttccacacctac 118966 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Minus Query: 289 atgaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 |||| |||||||| | |||||||||||||||||||||| || ||||| Sbjct: 119298 atgatgctcgtcgccaacaactccgccggcaccgtcaccaccctctac 119251
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 297 bits (150), Expect = 2e-77 Identities = 248/280 (88%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 291 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 229 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 288 Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 351 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 348 Query: 352 agcgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 411 ||| | |||||||||||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 349 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 408 Query: 412 gtgatgaacaccaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctc 471 || |||||||||||||||||||| | ||||||||| ||||||||||||||||||||||| Sbjct: 409 gtcatgaacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctc 468 Query: 472 tggttcgacccctccgccgactt-cacacctacnagatca 510 |||||||||||| |||||||||| ||||||||| |||||| Sbjct: 469 tggttcgaccccaccgccgacttccacacctacaagatca 508
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 297 bits (150), Expect = 2e-77 Identities = 248/280 (88%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 291 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 224 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 283 Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 351 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 343 Query: 352 agcgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 411 ||| | |||||||||||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 344 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 403 Query: 412 gtgatgaacaccaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctc 471 || |||||||||||||||||||| | ||||||||| ||||||||||||||||||||||| Sbjct: 404 gtcatgaacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctc 463 Query: 472 tggttcgacccctccgccgactt-cacacctacnagatca 510 |||||||||||| |||||||||| ||||||||| |||||| Sbjct: 464 tggttcgaccccaccgccgacttccacacctacaagatca 503
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 200 bits (101), Expect = 3e-48 Identities = 219/256 (85%), Gaps = 2/256 (0%) Strand = Plus / Plus Query: 241 ggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaagctcgtc 300 |||||||| |||| | |||||||||||||||||||||| || ||||||||||||| Sbjct: 133 ggcttcaactccacgcgcaagtacctcttcggcgagttcagcgtggagatgaagctcgtc 192 Query: 301 gacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgccacc 360 | |||||||||||| || || |||||||||||||||||||| ||||||||| ||| | Sbjct: 193 ggcggcaactccgctgggactgtcacctccttctacctgacgtccggcgagggcgacgag 252 Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac-gtgatgaa 419 ||||||||||||||||| ||||||||||| ||||| |||||| |||| || ||| | || Sbjct: 253 cacgacgagatcgacatggagttcatgggcaactccagcggc-tccccgacggtgctcaa 311 Query: 420 caccaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctctggttcga 479 ||| ||||| ||||||| |||||||||| | |||||||||||||||||||| |||||||| Sbjct: 312 cacgaacgtgtgggccaacggcgacggcaataaggagcaccagttctacctgtggttcga 371 Query: 480 cccctccgccgacttc 495 ||| ||||||||||| Sbjct: 372 cccggccgccgacttc 387
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 182 bits (92), Expect = 7e-43 Identities = 214/255 (83%) Strand = Plus / Plus Query: 239 ccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaagctcg 298 |||||||||| ||||||| ||||||| | |||||||||| |||| |||||||||| Sbjct: 275 ccggcttcaactccaaggagcagtacctgtacggcgagttcagcgtccagatgaagctca 334 Query: 299 tcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgcca 358 || |||||||||||||||||||||| | | ||||||||| | || ||||| ||| | Sbjct: 335 tccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacggcgacg 394 Query: 359 cccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatga 418 ||||||||||||||||| ||||||||||| ||| ||||||| | || ||| ||| Sbjct: 395 ggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtggtgctga 454 Query: 419 acaccaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctctggttcg 478 |||| ||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 455 acacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctctggttcg 514 Query: 479 acccctccgccgact 493 ||||||||||||||| Sbjct: 515 acccctccgccgact 529
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 182 bits (92), Expect = 7e-43 Identities = 214/255 (83%) Strand = Plus / Plus Query: 239 ccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaagctcg 298 |||||||||| ||||||| ||||||| | |||||||||| |||| |||||||||| Sbjct: 300 ccggcttcaactccaaggagcagtacctgtacggcgagttcagcgtccagatgaagctca 359 Query: 299 tcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgcca 358 || |||||||||||||||||||||| | | ||||||||| | || ||||| ||| | Sbjct: 360 tccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacggcgacg 419 Query: 359 cccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatga 418 ||||||||||||||||| ||||||||||| ||| ||||||| | || ||| ||| Sbjct: 420 ggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtggtgctga 479 Query: 419 acaccaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctctggttcg 478 |||| ||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 480 acacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctctggttcg 539 Query: 479 acccctccgccgact 493 ||||||||||||||| Sbjct: 540 acccctccgccgact 554
>gb|AY105107.1| Zea mays PCO140468 mRNA sequence Length = 1297 Score = 176 bits (89), Expect = 5e-41 Identities = 215/256 (83%), Gaps = 11/256 (4%) Strand = Plus / Plus Query: 241 ggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaagctcgtc 300 |||||||| |||| | |||||||||||||||||||||| || ||||||||||||| Sbjct: 306 ggcttcaactccacgcgcaagtacctcttcggcgagttcagcgtggagatgaagctcgtc 365 Query: 301 gacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgccacc 360 | |||||||||||| || || |||||||||||||||||||| ||||||||| ||| Sbjct: 366 ggcggcaactccgctgggactgtcacctccttctacctgacgtccggcgagggcg----- 420 Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacg-tgatgaa 419 ||||||||||||| ||||||||||| ||||| |||||| |||| ||| || | || Sbjct: 421 ----acgagatcgacatggagttcatgggcaactccagcggct-ccccgacggtgctcaa 475 Query: 420 caccaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctctggttcga 479 ||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| Sbjct: 476 cacgaacgtgtgggccaacggcgacggcaagaaggagcaccagttctacctgtggttcga 535 Query: 480 cccctccgccgacttc 495 ||| ||||||||||| Sbjct: 536 cccggccgccgacttc 551
>gb|AY106744.1| Zea mays PCO111647 mRNA sequence Length = 1267 Score = 174 bits (88), Expect = 2e-40 Identities = 213/255 (83%) Strand = Plus / Plus Query: 239 ccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaagctcg 298 |||||||||| ||||||| ||||||| | |||||||||| ||| |||||||||| Sbjct: 271 ccggcttcaactccaaggagcagtacctttacggcgagttcagcgtcgagatgaagctca 330 Query: 299 tcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgcca 358 || || |||||||||||||||||| | | ||||||||| | |||||||| ||| | Sbjct: 331 tccgggggaactccgccggcaccgtctcgtgcttctacctctcttccggcgacggcgacg 390 Query: 359 cccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatga 418 | ||||||||||||||| ||||||||||| ||||||||||| | || ||| ||| Sbjct: 391 ggcgcgacgagatcgacatggagttcatgggcaactcgagcgggcagccggtggtgctga 450 Query: 419 acaccaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctctggttcg 478 |||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 451 acaccaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctctggttcg 510 Query: 479 acccctccgccgact 493 ||||||||||||||| Sbjct: 511 acccctccgccgact 525
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 155 bits (78), Expect = 2e-34 Identities = 171/201 (85%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 304 ggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgccacccac 363 ||||||||||| |||||||| ||||||||||||||| | || ||||| | || ||| Sbjct: 379 ggcaactccgcgggcaccgtgacctccttctacctgtcgtcgggcgacgggcccgggcac 438 Query: 364 gacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatgaacacc 423 |||||||||||||| ||||||||||| ||| | ||||| | ||| ||| |||||||| Sbjct: 439 gacgagatcgacatggagttcatgggcaacgccagcgggcagcccgtggtgctgaacacc 498 Query: 424 aacgtctgggccagcggcgacggcnagaaggagcaccagttctacctctggttcgacccc 483 ||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 499 aacgtgtgggccaacggcgacggcaagaaggagcaccagttctacctgtggttcgacccg 558 Query: 484 tccgccgactt-cacacctac 503 |||||||||| ||||||||| Sbjct: 559 gccgccgacttccacacctac 579
>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence Length = 781 Score = 115 bits (58), Expect = 1e-22 Identities = 82/89 (92%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 416 tgaacaccaacgtctgggccagcggcgacggcnagaaggagcaccagttctacctctggt 475 ||||||||||||| ||||||| |||||||||| |||||||||||||||||||||| |||| Sbjct: 13 tgaacaccaacgtgtgggccaacggcgacggctagaaggagcaccagttctacctgtggt 72 Query: 476 tcgacccctccgccgactt-cacacctac 503 ||||||| |||||||||| ||||||||| Sbjct: 73 tcgacccggccgccgacttccacacctac 101
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 95.6 bits (48), Expect = 1e-16 Identities = 93/108 (86%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 291 ||||||||||||||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 266 tccggctccggcttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 325 Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 339 ||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 326 aagctcgtccccggcaactccgccggcaccgtcaccaccttctacctg 373 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatggg 389 ||||||||||||||| |||||||| |||| Sbjct: 392 cacgacgagatcgacttcgagttcctggg 420
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 95.6 bits (48), Expect = 1e-16 Identities = 93/108 (86%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 291 ||||||||||||||| |||||||| || | |||||||||||| || || | | | ||| Sbjct: 160 tccggctccggcttccagtccaagaccgaatacctcttcggcaagatcgacatgcagatc 219 Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 339 ||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 220 aagctcgtccccggcaactccgccggcaccgtcaccaccttctacctg 267 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatggg 389 ||||||||||||||| |||||||| |||| Sbjct: 286 cacgacgagatcgacttcgagttcctggg 314
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 73.8 bits (37), Expect = 5e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 291 |||||||| || ||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 28749714 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 28749773 Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 ||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 28749774 aagctcgtccccggcaactccgccggcaccgtcaccaccttctac 28749818 Score = 60.0 bits (30), Expect = 7e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 231 gtccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggat 290 |||||||||||||||| |||||||| | ||||||| | |||| ||| | | | ||| Sbjct: 28761493 gtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacatgcagat 28761552 Query: 291 gaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 ||||||||| |||||||||||||||||||||| || |||||||| Sbjct: 28761553 caagctcgtccccggcaactccgccggcaccgtcgccaccttctac 28761598 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 ||||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 28773893 aagctcgtccccggcaactccgccggcaccgtcaccgcctactac 28773849 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcggcga 404 ||||||||||||||| |||||||| |||| ||| |||||||||| Sbjct: 28761710 cacgacgagatcgacttcgagttcctggggaacgcgagcggcga 28761753 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 411 ||||||||||||||| |||||||| |||| ||||| |||||| ||||||| Sbjct: 13230402 cacgacgagatcgacttcgagttcctgggcaactccagcggcctcccctac 13230452 Score = 48.1 bits (24), Expect = 0.028 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 469 ctctggttcgacccctccgccgactt-cacacctac 503 ||||||||||||||| |||||||||| ||||||||| Sbjct: 28754822 ctctggttcgaccccaccgccgacttccacacctac 28754857 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 304 ggcaactccgccggcaccgtcacctccttctac 336 |||||||| ||||||||||||||| ||| |||| Sbjct: 13230243 ggcaactcggccggcaccgtcaccacctactac 13230275 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 468 cctctggttcgacccctccgccgacttc 495 |||||||||||||||| | ||||||||| Sbjct: 7156118 cctctggttcgaccccgctgccgacttc 7156091
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 73.8 bits (37), Expect = 5e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 291 |||||||| || ||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 57489 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 57548 Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 ||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 57549 aagctcgtccccggcaactccgccggcaccgtcaccaccttctac 57593 Score = 60.0 bits (30), Expect = 7e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 231 gtccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggat 290 |||||||||||||||| |||||||| | ||||||| | |||| ||| | | | ||| Sbjct: 69268 gtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacatgcagat 69327 Query: 291 gaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 ||||||||| |||||||||||||||||||||| || |||||||| Sbjct: 69328 caagctcgtccccggcaactccgccggcaccgtcgccaccttctac 69373 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 ||||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 81668 aagctcgtccccggcaactccgccggcaccgtcaccgcctactac 81624 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcggcga 404 ||||||||||||||| |||||||| |||| ||| |||||||||| Sbjct: 69485 cacgacgagatcgacttcgagttcctggggaacgcgagcggcga 69528 Score = 48.1 bits (24), Expect = 0.028 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 469 ctctggttcgacccctccgccgactt-cacacctac 503 ||||||||||||||| |||||||||| ||||||||| Sbjct: 62597 ctctggttcgaccccaccgccgacttccacacctac 62632
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 73.8 bits (37), Expect = 5e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 291 |||||||| || ||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 150280 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 150339 Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 ||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 150340 aagctcgtccccggcaactccgccggcaccgtcaccaccttctac 150384 Score = 60.0 bits (30), Expect = 7e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 231 gtccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggat 290 |||||||||||||||| |||||||| | ||||||| | |||| ||| | | | ||| Sbjct: 162059 gtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacatgcagat 162118 Query: 291 gaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 ||||||||| |||||||||||||||||||||| || |||||||| Sbjct: 162119 caagctcgtccccggcaactccgccggcaccgtcgccaccttctac 162164 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcggcga 404 ||||||||||||||| |||||||| |||| ||| |||||||||| Sbjct: 162276 cacgacgagatcgacttcgagttcctggggaacgcgagcggcga 162319 Score = 48.1 bits (24), Expect = 0.028 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 469 ctctggttcgacccctccgccgactt-cacacctac 503 ||||||||||||||| |||||||||| ||||||||| Sbjct: 155388 ctctggttcgaccccaccgccgacttccacacctac 155423
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 73.8 bits (37), Expect = 5e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 291 |||||||| || ||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 262 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 321 Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 ||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 322 aagctcgtccccggcaactccgccggcaccgtcaccaccttctac 366
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 73.8 bits (37), Expect = 5e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 291 |||||||| || ||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 262 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 321 Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 ||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 322 aagctcgtccccggcaactccgccggcaccgtcaccaccttctac 366
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatgaac 420 ||||||||||||||| |||||||| |||| ||| ||||||||| || ||||||||| || Sbjct: 337 cacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtgatgcac 396 Query: 421 accaacgt 428 |||||||| Sbjct: 397 accaacgt 404 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 453 ggagcaccagttctacctctggttcgacccctccgccgacttc 495 |||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 429 ggagcagcagttctacctctggttcgaccccaccgccgacttc 471 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttc 279 ||||||||||| ||| ||||||||| | ||| |||||||||||||||| Sbjct: 211 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttc 258
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatgaac 420 ||||||||||||||| |||||||| |||| ||| ||||||||| || ||||||||| || Sbjct: 32713 cacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtgatgcac 32654 Query: 421 accaacgt 428 |||||||| Sbjct: 32653 accaacgt 32646 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 453 ggagcaccagttctacctctggttcgacccctccgccgacttc 495 |||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 32621 ggagcagcagttctacctctggttcgaccccaccgccgacttc 32579 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttc 279 ||||||||||| ||| ||||||||| | ||| |||||||||||||||| Sbjct: 32994 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttc 32947 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Plus Query: 454 gagcaccagttctacctctggttcgacccctccgccgact 493 ||||| |||||| |||||||||||||||| ||||||||| Sbjct: 29252 gagcagcagttccgcctctggttcgaccccaccgccgact 29291
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatgaac 420 ||||||||||||||| |||||||| |||| ||| ||||||||| || ||||||||| || Sbjct: 30557005 cacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtgatgcac 30556946 Query: 421 accaacgt 428 |||||||| Sbjct: 30556945 accaacgt 30556938 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 453 ggagcaccagttctacctctggttcgacccctccgccgacttc 495 |||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 30556913 ggagcagcagttctacctctggttcgaccccaccgccgacttc 30556871 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttc 279 ||||||||||| ||| ||||||||| | ||| |||||||||||||||| Sbjct: 30557286 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttc 30557239 Score = 54.0 bits (27), Expect = 5e-04 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 454 gagcaccagttctacctctggttcgacccctccgccgactt-cacacctac 503 ||||| |||||| ||||||||||||||||| || ||||||| ||||||||| Sbjct: 30516931 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctac 30516881 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Plus Query: 454 gagcaccagttctacctctggttcgacccctccgccgact 493 ||||| |||||| |||||||||||||||| ||||||||| Sbjct: 30553544 gagcagcagttccgcctctggttcgaccccaccgccgact 30553583 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacc 327 |||||||||| || | |||||||||||||||||||| Sbjct: 30508603 aagctcgtcgccgacgactccgccggcaccgtcacc 30508568 Score = 44.1 bits (22), Expect = 0.44 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 467 acctctggttcgacccctccgccgactt-cacacctac 503 |||| |||||||||||| |||||||||| ||||||||| Sbjct: 32180527 acctgtggttcgaccccaccgccgacttccacacctac 32180564 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 |||||||||| | ||||||||||||||| |||||| ||| |||| Sbjct: 30517192 aagctcgtcgccaacaactccgccggcacggtcaccacctgctac 30517148 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 357 cacccacgacgagatcgacatcgagttcatggg 389 ||||||||||||||||||| | |||||| |||| Sbjct: 30508424 cacccacgacgagatcgacctggagttcctggg 30508392 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 cgacggcaactccgccggcaccgtc 324 ||||||||| ||||||||||||||| Sbjct: 23253345 cgacggcaagtccgccggcaccgtc 23253369
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 339 |||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 277 aagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctg 324 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatggg 389 ||||||||||||||| |||||||| |||| Sbjct: 343 cacgacgagatcgacttcgagttcctggg 371 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 tctacctctggttcgacccc 483 |||||||||||||||||||| Sbjct: 446 tctacctctggttcgacccc 465
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 339 |||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 274 aagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctg 321 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatggg 389 ||||||||||||||| |||||||| |||| Sbjct: 340 cacgacgagatcgacttcgagttcctggg 368 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 tctacctctggttcgacccc 483 |||||||||||||||||||| Sbjct: 443 tctacctctggttcgacccc 462
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatgaac 420 ||||||||||||||| |||||||| |||| ||| ||||||||| || ||||||||| || Sbjct: 405 cacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtgatgcac 464 Query: 421 accaacgt 428 |||||||| Sbjct: 465 accaacgt 472 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 453 ggagcaccagttctacctctggttcgacccctccgccgacttc 495 |||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 497 ggagcagcagttctacctctggttcgaccccaccgccgacttc 539 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttc 279 ||||||||||| ||| ||||||||| | ||| |||||||||||||||| Sbjct: 279 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttc 326
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 339 |||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 287 aagctcgtcggcggcgactccgccggcaccgtcaccgccttctacctg 334 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatggg 389 ||||||||||||||| |||||||| |||| Sbjct: 353 cacgacgagatcgacttcgagttcttggg 381
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 65.9 bits (33), Expect = 1e-07 Identities = 87/105 (82%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 291 |||||||| || ||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 154 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 213 Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 ||| ||||| ||||||||||||||||||||||||| |||||||| Sbjct: 214 aagttcgtccccggcaactccgccggcaccgtcaccaccttctac 258
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 |||||||||| |||| |||||||||||||||||||| |||||||| Sbjct: 113313 aagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 113357 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatggg 389 ||||||||||||||| |||||||| |||| Sbjct: 113474 cacgacgagatcgacttcgagttcctggg 113502 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 tctacctctggttcgacccc 483 |||||||||||||||||||| Sbjct: 113577 tctacctctggttcgacccc 113596
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 |||||||||| |||| |||||||||||||||||||| |||||||| Sbjct: 12932 aagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 12976 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatggg 389 ||||||||||||||| |||||||| |||| Sbjct: 13093 cacgacgagatcgacttcgagttcctggg 13121 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 tctacctctggttcgacccc 483 |||||||||||||||||||| Sbjct: 13196 tctacctctggttcgacccc 13215
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 |||||||||| |||| |||||||||||||||||||| |||||||| Sbjct: 19010115 aagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 19010159 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatggg 389 ||||||||||||||| |||||||| |||| Sbjct: 19010276 cacgacgagatcgacttcgagttcctggg 19010304 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 tctacctctggttcgacccc 483 |||||||||||||||||||| Sbjct: 19010379 tctacctctggttcgacccc 19010398
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 65.9 bits (33), Expect = 1e-07 Identities = 90/109 (82%) Strand = Plus / Plus Query: 231 gtccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggat 290 |||||||||||||||| |||||||| | ||||||| | |||| ||| | | | ||| Sbjct: 259 gtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacatgcagat 318 Query: 291 gaagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 339 ||||||||| |||||||||||||||||||||| || ||||||||||| Sbjct: 319 caagctcgtccccggcaactccgccggcaccgtcgccaccttctacctg 367 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcggcga 404 ||||||||||||||| |||||||| |||| ||| |||||||||| Sbjct: 386 cacgacgagatcgacttcgagttcctggggaacgcgagcggcga 429
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 |||||||||| |||| |||||||||||||||||||| |||||||| Sbjct: 19168764 aagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 19168808 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatggg 389 ||||||||||||||| |||||||| |||| Sbjct: 19168925 cacgacgagatcgacttcgagttcctggg 19168953 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 tctacctctggttcgacccc 483 |||||||||||||||||||| Sbjct: 19169028 tctacctctggttcgacccc 19169047
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 339 |||||||||| |||| ||||||||||||| |||||| ||||||||||| Sbjct: 326 aagctcgtcggcggcgactccgccggcacagtcaccgccttctacctg 373 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatggg 389 ||||||||||||||| |||||||| |||| Sbjct: 392 cacgacgagatcgacttcgagttcttggg 420
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 293 agctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 |||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 10358905 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 10358948 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 461 agttctacctctggttcgacccctccgccgacttc 495 ||||| ||||||||||||||||| ||||||||||| Sbjct: 35396754 agttccacctctggttcgaccccaccgccgacttc 35396720 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatggg 389 ||||||||||||||| |||||||| |||| Sbjct: 10359114 cacgacgagatcgacttcgagttcctggg 10359142
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 293 agctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 |||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 1327 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 1370 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatggg 389 ||||||||||||||| |||||||| |||| Sbjct: 1536 cacgacgagatcgacttcgagttcctggg 1564
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 293 agctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 |||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 124715 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 124758 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatggg 389 ||||||||||||||| |||||||| |||| Sbjct: 124924 cacgacgagatcgacttcgagttcctggg 124952
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 289 atgaagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 339 ||||||||||||| |||| ||||||| ||||||||||| ||||||||||| Sbjct: 294 atgaagctcgtcggcggcgactccgcgggcaccgtcacggccttctacctg 344 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 tctacctctggttcgacccc 483 |||||||||||||||||||| Sbjct: 466 tctacctctggttcgacccc 485
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 ||||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 339 aagctcgtccccggcaactccgccggcaccgtcaccgcctactac 383
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 ||||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 329 aagctcgtccccggcaactccgccggcaccgtcaccgcctactac 373
>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence Length = 977 Score = 56.0 bits (28), Expect = 1e-04 Identities = 47/52 (90%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 453 ggagcaccagttctacctctggttcgacccctccgccgactt-cacacctac 503 |||||| |||||| |||||||||||||||| |||||||||| ||||||||| Sbjct: 706 ggagcagcagttccgcctctggttcgaccccaccgccgacttccacacctac 655
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 291 ||||||||||| ||| |||||||| | |||||||||||||| || || | | | | | Sbjct: 205 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 264 Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 339 ||||||||| ||||||||| ||||||||||| ||| ||| ||||||| Sbjct: 265 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctg 312 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatgggaaac 393 ||||||||||||||| |||||||| |||||||| Sbjct: 331 cacgacgagatcgacttcgagttcctgggaaac 363
>gb|AY106776.1| Zea mays PCO076978 mRNA sequence Length = 974 Score = 56.0 bits (28), Expect = 1e-04 Identities = 47/52 (90%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 453 ggagcaccagttctacctctggttcgacccctccgccgactt-cacacctac 503 |||||| |||||| |||||||||||||||| |||||||||| ||||||||| Sbjct: 498 ggagcagcagttccgcctctggttcgaccccaccgccgacttccacacctac 549
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 56.0 bits (28), Expect = 1e-04 Identities = 47/52 (90%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 453 ggagcaccagttctacctctggttcgacccctccgccgactt-cacacctac 503 |||||| |||||| |||||||||||||||| |||||||||| ||||||||| Sbjct: 527 ggagcagcagttccgcctctggttcgaccccaccgccgacttccacacctac 578 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 304 ggcaactccgccggcaccgtcacctccttctacctg 339 |||||||||||||||||||||||| ||| ||||||| Sbjct: 381 ggcaactccgccggcaccgtcaccgcctactacctg 416
>ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 54.0 bits (27), Expect = 5e-04 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 454 gagcaccagttctacctctggttcgacccctccgccgactt-cacacctac 503 ||||| |||||| |||||||||||||||| |||||||||| ||||||||| Sbjct: 439 gagcagcagttccgcctctggttcgaccccaccgccgacttccacacctac 489 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Plus Query: 289 atgaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 |||| |||||||| | |||||||||||||||||||||| || ||||| Sbjct: 268 atgatgctcgtcgccaacaactccgccggcaccgtcaccaccctctac 315
>ref|XM_468468.1| Oryza sativa (japonica cultivar-group), mRNA Length = 984 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 461 agttctacctctggttcgacccctccgccgacttc 495 ||||| ||||||||||||||||| ||||||||||| Sbjct: 497 agttccacctctggttcgaccccaccgccgacttc 531
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 54.0 bits (27), Expect = 5e-04 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 454 gagcaccagttctacctctggttcgacccctccgccgactt-cacacctac 503 ||||| |||||| ||||||||||||||||| || ||||||| ||||||||| Sbjct: 385 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctac 435 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 |||||||||| | ||||||||||||||| |||||| ||| |||| Sbjct: 220 aagctcgtcgccaacaactccgccggcacggtcaccacctgctac 264
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 54.0 bits (27), Expect = 5e-04 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 454 gagcaccagttctacctctggttcgacccctccgccgactt-cacacctac 503 ||||| |||||| ||||||||||||||||| || ||||||| ||||||||| Sbjct: 150308 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctac 150258 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacc 327 |||||||||| || | |||||||||||||||||||| Sbjct: 141980 aagctcgtcgccgacgactccgccggcaccgtcacc 141945 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 |||||||||| | ||||||||||||||| |||||| ||| |||| Sbjct: 150569 aagctcgtcgccaacaactccgccggcacggtcaccacctgctac 150525 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 357 cacccacgacgagatcgacatcgagttcatggg 389 ||||||||||||||||||| | |||||| |||| Sbjct: 141801 cacccacgacgagatcgacctggagttcctggg 141769
>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds Length = 1162 Score = 54.0 bits (27), Expect = 5e-04 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 454 gagcaccagttctacctctggttcgacccctccgccgactt-cacacctac 503 ||||| |||||| ||||||||||||||||| || ||||||| ||||||||| Sbjct: 457 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctac 507 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 |||||||||| | ||||||||||||||| |||||| ||| |||| Sbjct: 292 aagctcgtcgccaacaactccgccggcacggtcaccacctgctac 336
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1273 Score = 54.0 bits (27), Expect = 5e-04 Identities = 122/153 (79%), Gaps = 3/153 (1%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 291 ||||||||||||||| |||||||| | ||||||||| |||| || || | | | ||| Sbjct: 323 tccggctccggcttccagtccaagaacgagtacctctacggcaagctcgatatgcagatc 382 Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 351 ||||| || ||| ||||| ||||||||||||||| |||||||||| | ||| || Sbjct: 383 aagcttgtacccgggaactcagccggcaccgtcaccaccttctacctctcgtccc---ag 439 Query: 352 agcgccacccacgacgagatcgacatcgagttc 384 || ||| |||||||||||||||| |||||||| Sbjct: 440 ggccccaaccacgacgagatcgacttcgagttc 472
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 411 ||||||||||||||| |||||||| |||| ||||| |||||| ||||||| Sbjct: 147590 cacgacgagatcgacttcgagttcctgggcaactccagcggcctcccctac 147640 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 304 ggcaactccgccggcaccgtcacctccttctac 336 |||||||| ||||||||||||||| ||| |||| Sbjct: 147431 ggcaactcggccggcaccgtcaccacctactac 147463
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 461 agttctacctctggttcgacccctccgccgacttc 495 ||||| ||||||||||||||||| ||||||||||| Sbjct: 8275 agttccacctctggttcgaccccaccgccgacttc 8241
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 461 agttctacctctggttcgacccctccgccgacttc 495 ||||| ||||||||||||||||| ||||||||||| Sbjct: 57302 agttccacctctggttcgaccccaccgccgacttc 57268
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 54.0 bits (27), Expect = 5e-04 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 454 gagcaccagttctacctctggttcgacccctccgccgactt-cacacctac 503 ||||| |||||| ||||||||||||||||| || ||||||| ||||||||| Sbjct: 475 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctac 525 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 |||||||||| | ||||||||||||||| |||||| ||| |||| Sbjct: 310 aagctcgtcgccaacaactccgccggcacggtcaccacctgctac 354
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 411 ||||||||||||||| |||||||| |||| ||||| |||||| ||||||| Sbjct: 643 cacgacgagatcgacttcgagttcctgggcaactccagcggcctcccctac 693 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 304 ggcaactccgccggcaccgtcacctccttctac 336 |||||||| ||||||||||||||| ||| |||| Sbjct: 589 ggcaactcggccggcaccgtcaccacctactac 621
>ref|NM_187656.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 783 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 462 gttctacctctggttcgacccctccgccgacttc 495 |||| ||||||||||||||||| ||||||||||| Sbjct: 348 gttccacctctggttcgaccccaccgccgacttc 381
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 462 gttctacctctggttcgacccctccgccgacttc 495 |||| ||||||||||||||||| ||||||||||| Sbjct: 471775 gttccacctctggttcgaccccaccgccgacttc 471742 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 tgaagctcgtcgacggcaactccg 313 ||||||||| |||||||||||||| Sbjct: 829621 tgaagctcgacgacggcaactccg 829644
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 462 gttctacctctggttcgacccctccgccgacttc 495 |||| ||||||||||||||||| ||||||||||| Sbjct: 471773 gttccacctctggttcgaccccaccgccgacttc 471740 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 tgaagctcgtcgacggcaactccg 313 ||||||||| |||||||||||||| Sbjct: 829619 tgaagctcgacgacggcaactccg 829642
>dbj|AK119538.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C03, full insert sequence Length = 1281 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 462 gttctacctctggttcgacccctccgccgacttc 495 |||| ||||||||||||||||| ||||||||||| Sbjct: 668 gttccacctctggttcgaccccaccgccgacttc 701
>dbj|AK104060.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G01, full insert sequence Length = 1186 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 462 gttctacctctggttcgacccctccgccgacttc 495 |||| ||||||||||||||||| ||||||||||| Sbjct: 573 gttccacctctggttcgaccccaccgccgacttc 606
>dbj|AK061126.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-G12, full insert sequence Length = 1193 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 462 gttctacctctggttcgacccctccgccgacttc 495 |||| ||||||||||||||||| ||||||||||| Sbjct: 580 gttccacctctggttcgaccccaccgccgacttc 613
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggc 273 |||||||| |||||| ||||||||||| ||||||||| |||| Sbjct: 273 tccggctcgggcttccagtccaaggcccagtacctctacggc 314 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcgg 401 ||||||||||||||| |||||||| |||| ||| ||||||| Sbjct: 399 cacgacgagatcgacttcgagttcctggggaacgcgagcgg 439 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 308 actccgccggcaccgtcacctccttcta 335 ||||||||||||||||| || ||||||| Sbjct: 349 actccgccggcaccgtcgccaccttcta 376
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggc 273 |||||||| |||||| ||||||||||| ||||||||| |||| Sbjct: 163 tccggctcgggcttccagtccaaggcccagtacctctacggc 204 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcgg 401 ||||||||||||||| |||||||| |||| ||| ||||||| Sbjct: 414 cacgacgagatcgacttcgagttcctggggaacgcgagcgg 454 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 308 actccgccggcaccgtcacctccttcta 335 ||||||||||||||||| || ||||||| Sbjct: 239 actccgccggcaccgtcgccaccttcta 266
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 232 tccggctccggcttcaagtccaaggccaagtacctcttcggc 273 |||||||| |||||| ||||||||||| ||||||||| |||| Sbjct: 280 tccggctcgggcttccagtccaaggcccagtacctctacggc 321 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcgg 401 ||||||||||||||| |||||||| |||| ||| ||||||| Sbjct: 406 cacgacgagatcgacttcgagttcctggggaacgcgagcgg 446 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 308 actccgccggcaccgtcacctccttcta 335 ||||||||||||||||| || ||||||| Sbjct: 356 actccgccggcaccgtcgccaccttcta 383
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03, complete sequence Length = 116214 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 462 gttctacctctggttcgacccctccgccgacttc 495 |||| ||||||||||||||||| ||||||||||| Sbjct: 70235 gttccacctctggttcgaccccaccgccgacttc 70202
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 467 acctctggttcgacccctccgccgacttc 495 ||||||||||||||||| ||||||||||| Sbjct: 482 acctctggttcgaccccaccgccgacttc 510 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 360 ccacgacgagatcgacatcgagttcatggg 389 |||||||||||||||||| |||||| |||| Sbjct: 360 ccacgacgagatcgacatggagttcctggg 389
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 467 acctctggttcgacccctccgccgacttc 495 ||||||||||||||||| ||||||||||| Sbjct: 17438397 acctctggttcgaccccaccgccgacttc 17438425 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 360 ccacgacgagatcgacatcgagttcatggg 389 |||||||||||||||||| |||||| |||| Sbjct: 17438275 ccacgacgagatcgacatggagttcctggg 17438304 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 tggttcgacccctccgccgacttc 495 |||||||||||| ||||||||||| Sbjct: 20676569 tggttcgaccccaccgccgacttc 20676592
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 467 acctctggttcgacccctccgccgacttc 495 ||||||||||||||||| ||||||||||| Sbjct: 106621 acctctggttcgaccccaccgccgacttc 106649 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 360 ccacgacgagatcgacatcgagttcatggg 389 |||||||||||||||||| |||||| |||| Sbjct: 106499 ccacgacgagatcgacatggagttcctggg 106528
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacc 327 |||||||||| || | |||||||||||||||||||| Sbjct: 244 aagctcgtcgccgacgactccgccggcaccgtcacc 279 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 357 cacccacgacgagatcgacatcgagttcatggg 389 ||||||||||||||||||| | |||||| |||| Sbjct: 312 cacccacgacgagatcgacctggagttcctggg 344
>ref|XM_473792.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Plus Query: 454 gagcaccagttctacctctggttcgacccctccgccgact 493 ||||| |||||| |||||||||||||||| ||||||||| Sbjct: 418 gagcagcagttccgcctctggttcgaccccaccgccgact 457
>gb|BT017470.1| Zea mays clone EL01N0408C10.c mRNA sequence Length = 878 Score = 48.1 bits (24), Expect = 0.028 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 469 ctctggttcgacccctccgccgactt-cacacctac 503 ||||||||||||||| |||||||||| ||||||||| Sbjct: 262 ctctggttcgaccccaccgccgacttccacacctac 297
>gb|AY023104.1| Oryza sativa microsatellite MRG5429 containing (GAG)X9, genomic sequence Length = 227 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Minus Query: 289 atgaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 336 |||| |||||||| | |||||||||||||||||||||| || ||||| Sbjct: 186 atgatgctcgtcgccaacaactccgccggcaccgtcaccaccctctac 139
>emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2 Length = 223670 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 135 cgaccagttcgaggtgatcggcga 158 |||||||||||||||||||||||| Sbjct: 155164 cgaccagttcgaggtgatcggcga 155187
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 135 cgaccagttcgaggtgatcggcga 158 |||||||||||||||||||||||| Sbjct: 500427 cgaccagttcgaggtgatcggcga 500450 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 135 cgaccagttcgaggtgatcggcga 158 |||||||||||||||||||||||| Sbjct: 405174 cgaccagttcgaggtgatcggcga 405151 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 gatgaagctcgtcgacggcaa 308 ||||||||||||||||||||| Sbjct: 1747182 gatgaagctcgtcgacggcaa 1747162
>dbj|AK099651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F24, full insert sequence Length = 872 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacc 327 |||||||||| || | |||||||||||||||||||| Sbjct: 307 aagctcgtcgccgacgactccgccggcaccgtcacc 272
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full insert sequence Length = 1041 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 292 aagctcgtcgacggcaactccgccggcaccgtcacc 327 |||||||||| || | |||||||||||||||||||| Sbjct: 307 aagctcgtcgccgacgactccgccggcaccgtcacc 342 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 357 cacccacgacgagatcgacatcgagttcatggg 389 ||||||||||||||||||| | |||||| |||| Sbjct: 375 cacccacgacgagatcgacctggagttcctggg 407
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 48.1 bits (24), Expect = 0.028 Identities = 57/68 (83%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatgaac 420 ||||||||||||||| |||||||| |||| ||| |||||| || |||||| | || || Sbjct: 417 cacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacgctgcac 476 Query: 421 accaacgt 428 |||||||| Sbjct: 477 accaacgt 484
>ref|XM_958552.1| Neurospora crassa OR74A hypothetical protein ( phenol hydroxylase related protein [imported] - Neurospora crassa OR74A ) (NCU06804.1) partial mRNA Length = 1926 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 252 caaggccaagtacctcttcggcg 274 ||||||||||||||||||||||| Sbjct: 516 caaggccaagtacctcttcggcg 538
>ref|XM_327089.1| Neurospora crassa OR74A hypothetical protein ( phenol hydroxylase related protein [imported] - Neurospora crassa OR74A ) (NCU06804.1) partial mRNA Length = 1926 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 252 caaggccaagtacctcttcggcg 274 ||||||||||||||||||||||| Sbjct: 516 caaggccaagtacctcttcggcg 538
>emb|AL356173.2|NCB14D6 Neurospora crassa DNA linkage group II BAC contig B14D6 Length = 199386 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 252 caaggccaagtacctcttcggcg 274 ||||||||||||||||||||||| Sbjct: 58531 caaggccaagtacctcttcggcg 58553
>gb|AY043237.1| Vitis vinifera putative xyloglucan endotransglycosylase XET1 mRNA, partial cds Length = 451 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 453 ggagcaccagttctacctctggttcgacccc 483 |||||| || ||||||||||||||||||||| Sbjct: 70 ggagcaacaattctacctctggttcgacccc 100
>gb|DQ100338.1| Eucalyptus globulus putative xyloglucan endotransglycosylase/hydrolase (XTH2) mRNA, partial cds Length = 936 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgaccc 407 ||||||||||| ||| |||||||| |||| ||| |||||||||||| Sbjct: 51 cacgacgagattgacttcgagttcctggggaacctgagcggcgaccc 97
>gb|L22162.1|SOYMER5HOM Glycine max brassinosteroid-regulated protein mRNA, complete cds Length = 1063 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 453 ggagcaccagttctacctctggttcgacccc 483 |||||| |||||||| ||||||||||||||| Sbjct: 428 ggagcaacagttctatctctggttcgacccc 458
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 310 tccgccggcaccgtcacctccttctacctg 339 |||||||||||||||||| ||| ||||||| Sbjct: 363 tccgccggcaccgtcaccgcctactacctg 392
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 44.1 bits (22), Expect = 0.44 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 467 acctctggttcgacccctccgccgactt-cacacctac 503 |||| |||||||||||| |||||||||| ||||||||| Sbjct: 76216 acctgtggttcgaccccaccgccgacttccacacctac 76253
>gb|AF168681.1| Homo sapiens CRIM1 protein gene, partial cds; and FEZ2 gene, partial sequence Length = 236303 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 326 cctccttctacctgacctccgg 347 |||||||||||||||||||||| Sbjct: 202208 cctccttctacctgacctccgg 202229
>gb|AC007401.4| Homo sapiens BAC clone RP11-501O7 from 2, complete sequence Length = 83656 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 326 cctccttctacctgacctccgg 347 |||||||||||||||||||||| Sbjct: 60552 cctccttctacctgacctccgg 60531
>dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P08, full insert sequence Length = 1199 Score = 44.1 bits (22), Expect = 0.44 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 467 acctctggttcgacccctccgccgactt-cacacctac 503 |||| |||||||||||| |||||||||| ||||||||| Sbjct: 438 acctgtggttcgaccccaccgccgacttccacacctac 475
>dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C07, full insert sequence Length = 1279 Score = 44.1 bits (22), Expect = 0.44 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 467 acctctggttcgacccctccgccgactt-cacacctac 503 |||| |||||||||||| |||||||||| ||||||||| Sbjct: 442 acctgtggttcgaccccaccgccgacttccacacctac 479
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 44.1 bits (22), Expect = 0.44 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 467 acctctggttcgacccctccgccgactt-cacacctac 503 |||| |||||||||||| |||||||||| ||||||||| Sbjct: 31703 acctgtggttcgaccccaccgccgacttccacacctac 31740
>ref|NM_197613.1| Oryza sativa (japonica cultivar-group) putative cellulase (OSJNBa0001O14.5), mRNA Length = 969 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 467 acctctggttcgacccctccgccgacttc 495 ||||||||||||||||| |||||| |||| Sbjct: 539 acctctggttcgaccccaccgccggcttc 567
>ref|XM_472791.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 474 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 cgacggcaactccgccggcaccgtc 324 ||||||||| ||||||||||||||| Sbjct: 135 cgacggcaagtccgccggcaccgtc 159
>gb|AY320035.2| Bacteriophage VWB, complete genome Length = 49220 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 142 ttcgaggtgatcggcgaccgcgacc 166 ||||||||| ||||||||||||||| Sbjct: 19260 ttcgaggtgctcggcgaccgcgacc 19284
>gb|AY196994.1| Streptomyces griseoruber heda cluster, complete sequence Length = 45603 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 cgaggtgatcggcgaccgcgaccac 168 ||||||| ||||||||||||||||| Sbjct: 30223 cgaggtggtcggcgaccgcgaccac 30199
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete sequence Length = 178022 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 467 acctctggttcgacccctccgccgacttc 495 ||||||||||||||||| |||||| |||| Sbjct: 64150 acctctggttcgaccccaccgccggcttc 64178
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 467 acctctggttcgacccctccgccgacttc 495 ||||||||||||||||| |||||| |||| Sbjct: 20801751 acctctggttcgaccccaccgccggcttc 20801779
>dbj|AB196975.1| Sagittaria pygmaea SpXTH2 mRNA for xyloglucan endotransglucosylase/hydrolase, partial cds Length = 708 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttcatggg 389 ||||||||||||||| |||||||| |||| Sbjct: 74 cacgacgagatcgacttcgagttcctggg 102
>gb|AE004730.1| Pseudomonas aeruginosa PAO1, section 291 of 529 of the complete genome Length = 20021 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 144 cgaggtgatcggcgaccgcgaccacatcg 172 |||||||||||||| ||||||| |||||| Sbjct: 17835 cgaggtgatcggcgcccgcgactacatcg 17807
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 410 acgtgatgaacaccaacgtctgggccagc 438 ||||| |||||||| |||||||||||||| Sbjct: 3040446 acgtggtgaacaccgacgtctgggccagc 3040418 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cctccggcgagagcgccacc 360 |||||||||||||||||||| Sbjct: 80401 cctccggcgagagcgccacc 80420
>dbj|AK119676.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-G11, full insert sequence Length = 757 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 cgacggcaactccgccggcaccgtc 324 ||||||||| ||||||||||||||| Sbjct: 220 cgacggcaagtccgccggcaccgtc 244
>dbj|AK059231.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-E05, full insert sequence Length = 753 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 cgacggcaactccgccggcaccgtc 324 ||||||||| ||||||||||||||| Sbjct: 216 cgacggcaagtccgccggcaccgtc 240
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 467 acctctggttcgacccctccgccgacttc 495 ||||||||||||||||| |||||| |||| Sbjct: 20813015 acctctggttcgaccccaccgccggcttc 20813043
>emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0048E02, complete sequence Length = 121337 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 cgacggcaactccgccggcaccgtc 324 ||||||||| ||||||||||||||| Sbjct: 91498 cgacggcaagtccgccggcaccgtc 91522
>gb|AC167918.2| Mycosphaerella graminicola clone JGIBBWB-5F7, complete sequence Length = 32954 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgacgagatcgacatcgagt 382 |||||||||||||||||||| Sbjct: 21417 cgacgagatcgacatcgagt 21436
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 ggccaaggccgacttcgacg 136 |||||||||||||||||||| Sbjct: 2170872 ggccaaggccgacttcgacg 2170853
>ref|NM_187550.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 597 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 tgaagctcgtcgacggcaactccg 313 ||||||||| |||||||||||||| Sbjct: 278 tgaagctcgacgacggcaactccg 301
>ref|XM_478514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 tggttcgacccctccgccgacttc 495 |||||||||||| ||||||||||| Sbjct: 454 tggttcgaccccaccgccgacttc 477
>ref|XM_478515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 657 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 tggttcgacccctccgccgacttc 495 |||||||||||| ||||||||||| Sbjct: 546 tggttcgaccccaccgccgacttc 569
>gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence Length = 114178 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 cgaggtgatcggcgaccgcg 163 |||||||||||||||||||| Sbjct: 47016 cgaggtgatcggcgaccgcg 46997
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 ggccaaggccgacttcgacg 136 |||||||||||||||||||| Sbjct: 654195 ggccaaggccgacttcgacg 654176
>ref|XM_387049.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06873.1) partial mRNA Length = 1125 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgacgagatcgacatcgagt 382 |||||||||||||||||||| Sbjct: 351 cgacgagatcgacatcgagt 370
>gb|AF494052.1| Chlamydomonas reinhardtii thioredoxin reductase TR1 mRNA, complete cds Length = 2941 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccaaggccgacttcgacgac 138 |||||||||||||||||||| Sbjct: 1563 ccaaggccgacttcgacgac 1582
>gb|AC147484.21| Medicago truncatula clone mth2-52b4, complete sequence Length = 119559 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 ttctacctctggttcgaccc 482 |||||||||||||||||||| Sbjct: 109353 ttctacctctggttcgaccc 109372 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 ttctacctctggttcgaccc 482 |||||||||||||||||||| Sbjct: 105134 ttctacctctggttcgaccc 105153
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 ccgccggcaccgtcacctcc 330 |||||||||||||||||||| Sbjct: 18260 ccgccggcaccgtcacctcc 18241
>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence Length = 118183 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 ccgccggcaccgtcacctcc 330 |||||||||||||||||||| Sbjct: 78242 ccgccggcaccgtcacctcc 78223
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 cgacttcgacgaccagttcg 145 |||||||||||||||||||| Sbjct: 3175019 cgacttcgacgaccagttcg 3175038
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 38 cggcgaccatggcgccnaggtca 60 |||||||||||||||| |||||| Sbjct: 883550 cggcgaccatggcgccaaggtca 883528
>dbj|AB196978.1| Sagittaria pygmaea SpXTH5 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1029 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 aactccgccggcaccgtcac 326 |||||||||||||||||||| Sbjct: 341 aactccgccggcaccgtcac 360
>dbj|AB196974.1| Sagittaria pygmaea SpXTH1 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 361 cacgacgagatcgacatcgagttc 384 ||||||||||||||| |||||||| Sbjct: 446 cacgacgagatcgacttcgagttc 469
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 tcgctggagctcgaccagga 230 |||||||||||||||||||| Sbjct: 3136434 tcgctggagctcgaccagga 3136453 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cgccacccacgacgagatcg 373 |||||||||||||||||||| Sbjct: 2262247 cgccacccacgacgagatcg 2262228
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 tgaagctcgtcgacggcaactccg 313 ||||||||| |||||||||||||| Sbjct: 125166 tgaagctcgacgacggcaactccg 125189
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 468 cctctggttcgacccctccgccgacttc 495 |||||||||||||||| | ||||||||| Sbjct: 33529 cctctggttcgaccccgctgccgacttc 33502
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 tggttcgacccctccgccgacttc 495 |||||||||||| ||||||||||| Sbjct: 29319 tggttcgaccccaccgccgacttc 29342
>dbj|AK111340.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F07, full insert sequence Length = 658 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 tggttcgacccctccgccgacttc 495 |||||||||||| ||||||||||| Sbjct: 546 tggttcgaccccaccgccgacttc 569
>dbj|AK107855.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B01, full insert sequence Length = 767 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 tgaagctcgtcgacggcaactccg 313 ||||||||| |||||||||||||| Sbjct: 274 tgaagctcgacgacggcaactccg 297
>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full insert sequence Length = 1707 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 tggttcgacccctccgccgacttc 495 |||||||||||| ||||||||||| Sbjct: 640 tggttcgaccccaccgccgacttc 663
>dbj|AK067158.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094M16, full insert sequence Length = 2073 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 cttctacctgacctccggcg 349 |||||||||||||||||||| Sbjct: 189 cttctacctgacctccggcg 170
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 acgagatcgacatcgagttc 384 |||||||||||||||||||| Sbjct: 110345 acgagatcgacatcgagttc 110364
>dbj|D82039.1| Oryza sativa mRNA for OSK1, complete cds Length = 2209 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 cttctacctgacctccggcg 349 |||||||||||||||||||| Sbjct: 183 cttctacctgacctccggcg 164 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,321,337 Number of Sequences: 3902068 Number of extensions: 2321337 Number of successful extensions: 48322 Number of sequences better than 10.0: 138 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46643 Number of HSP's gapped (non-prelim): 1669 length of query: 510 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 488 effective length of database: 17,147,199,772 effective search space: 8367833488736 effective search space used: 8367833488736 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)