ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart55h11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein Length = 1104 Score = 519 bits (262), Expect = e-144 Identities = 304/318 (95%) Strand = Plus / Plus Query: 237 tagctagcgtggaggcgtccaaggtgggagacccaagcacaggctagctagccgaccagc 296 ||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1 tagctcgcgtggaggtgtccaaggtgggagacccaagcacgggctagctagccgaccagc 60 Query: 297 tgctccaccggagccgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgg 356 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 61 tgctccgccggagccgatggctggcgccgacgtcgacgtcgggacggagctcaggctcgg 120 Query: 357 gctgccgggaggcggcgccgaggcggccaaggccgggaagaggggctatgaggacaccat 416 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gctgcccgggggcggcgccgaggcggccaaggccgggaagaggggctatgaggacaccat 180 Query: 417 tgacttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga 476 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 181 tgacttgaagctcacgctgcccaccggcggcatgcaggaagactctgccggcaagccgga 240 Query: 477 gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagcc 536 ||| || |||||||||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 241 gccagccgccgacaaggccaagaggcccgctgaggccgcggccgccgaccccgagaagcc 300 Query: 537 acctgctcccaaggcaca 554 |||||||||||||||||| Sbjct: 301 acctgctcccaaggcaca 318
>ref|XM_469684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 811 Score = 190 bits (96), Expect = 3e-45 Identities = 216/256 (84%), Gaps = 15/256 (5%) Strand = Plus / Plus Query: 311 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 366 ||||||| |||||||| || |||||||||||||||||| |||| |||||||| ||| Sbjct: 99 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 158 Query: 367 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 418 |||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct: 159 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 218 Query: 419 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 476 || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| |||| Sbjct: 219 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 278 Query: 477 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 535 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct: 279 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 338 Query: 536 cacctgctcccaaggc 551 |||||||||||||||| Sbjct: 339 cacctgctcccaaggc 354
>ref|XM_469685.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1379 Score = 190 bits (96), Expect = 3e-45 Identities = 216/256 (84%), Gaps = 15/256 (5%) Strand = Plus / Plus Query: 311 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 366 ||||||| |||||||| || |||||||||||||||||| |||| |||||||| ||| Sbjct: 154 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 213 Query: 367 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 418 |||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct: 214 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 273 Query: 419 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 476 || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| |||| Sbjct: 274 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 333 Query: 477 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 535 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct: 334 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 393 Query: 536 cacctgctcccaaggc 551 |||||||||||||||| Sbjct: 394 cacctgctcccaaggc 409
>emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative IAA1 protein (iaa1 gene) Length = 1068 Score = 190 bits (96), Expect = 3e-45 Identities = 216/256 (84%), Gaps = 15/256 (5%) Strand = Plus / Plus Query: 311 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 366 ||||||| |||||||| || |||||||||||||||||| |||| |||||||| ||| Sbjct: 151 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 210 Query: 367 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 418 |||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct: 211 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 270 Query: 419 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 476 || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| |||| Sbjct: 271 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 330 Query: 477 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 535 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct: 331 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 390 Query: 536 cacctgctcccaaggc 551 |||||||||||||||| Sbjct: 391 cacctgctcccaaggc 406
>dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A20, full insert sequence Length = 1092 Score = 190 bits (96), Expect = 3e-45 Identities = 216/256 (84%), Gaps = 15/256 (5%) Strand = Plus / Plus Query: 311 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 366 ||||||| |||||||| || |||||||||||||||||| |||| |||||||| ||| Sbjct: 160 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 219 Query: 367 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 418 |||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct: 220 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 279 Query: 419 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 476 || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| |||| Sbjct: 280 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 339 Query: 477 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 535 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct: 340 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 399 Query: 536 cacctgctcccaaggc 551 |||||||||||||||| Sbjct: 400 cacctgctcccaaggc 415
>dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C11, full insert sequence Length = 1180 Score = 190 bits (96), Expect = 3e-45 Identities = 216/256 (84%), Gaps = 15/256 (5%) Strand = Plus / Plus Query: 311 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 366 ||||||| |||||||| || |||||||||||||||||| |||| |||||||| ||| Sbjct: 156 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 215 Query: 367 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 418 |||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct: 216 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 275 Query: 419 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 476 || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| |||| Sbjct: 276 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 335 Query: 477 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 535 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct: 336 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 395 Query: 536 cacctgctcccaaggc 551 |||||||||||||||| Sbjct: 396 cacctgctcccaaggc 411
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 186 bits (94), Expect = 5e-44 Identities = 214/254 (84%), Gaps = 15/254 (5%) Strand = Plus / Minus Query: 311 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 366 ||||||| |||||||| || |||||||||||||||||| |||| |||||||| ||| Sbjct: 30190671 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 30190612 Query: 367 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 418 |||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct: 30190611 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 30190552 Query: 419 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 476 || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| |||| Sbjct: 30190551 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 30190492 Query: 477 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 535 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct: 30190491 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 30190432 Query: 536 cacctgctcccaag 549 |||||||||||||| Sbjct: 30190431 cacctgctcccaag 30190418 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 cctcctctctttctcctccctcta 106 |||||||||||||||||| ||||| Sbjct: 16731929 cctcctctctttctcctctctcta 16731906 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tccctcctctctttctcctc 100 |||||||||||||||||||| Sbjct: 7018925 tccctcctctctttctcctc 7018944
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 186 bits (94), Expect = 5e-44 Identities = 214/254 (84%), Gaps = 15/254 (5%) Strand = Plus / Plus Query: 311 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 366 ||||||| |||||||| || |||||||||||||||||| |||| |||||||| ||| Sbjct: 33224 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 33283 Query: 367 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 418 |||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct: 33284 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 33343 Query: 419 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 476 || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| |||| Sbjct: 33344 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 33403 Query: 477 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 535 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct: 33404 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 33463 Query: 536 cacctgctcccaag 549 |||||||||||||| Sbjct: 33464 cacctgctcccaag 33477
>emb|AJ563599.2|OSA563599 Oryza sativa (indica cultivar-group) iaa1 gene for Aux/IAA protein, exons 1-5 Length = 4539 Score = 186 bits (94), Expect = 5e-44 Identities = 214/254 (84%), Gaps = 15/254 (5%) Strand = Plus / Plus Query: 311 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 366 ||||||| |||||||| || |||||||||||||||||| |||| |||||||| ||| Sbjct: 2148 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 2207 Query: 367 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 418 |||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct: 2208 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 2267 Query: 419 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 476 || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| |||| Sbjct: 2268 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 2327 Query: 477 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 535 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct: 2328 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 2387 Query: 536 cacctgctcccaag 549 |||||||||||||| Sbjct: 2388 cacctgctcccaag 2401
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 186 bits (94), Expect = 5e-44 Identities = 214/254 (84%), Gaps = 15/254 (5%) Strand = Plus / Minus Query: 311 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 366 ||||||| |||||||| || |||||||||||||||||| |||| |||||||| ||| Sbjct: 30282093 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 30282034 Query: 367 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 418 |||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct: 30282033 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 30281974 Query: 419 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 476 || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| |||| Sbjct: 30281973 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 30281914 Query: 477 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 535 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct: 30281913 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 30281854 Query: 536 cacctgctcccaag 549 |||||||||||||| Sbjct: 30281853 cacctgctcccaag 30281840 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 cctcctctctttctcctccctcta 106 |||||||||||||||||| ||||| Sbjct: 16725562 cctcctctctttctcctctctcta 16725539 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tccctcctctctttctcctc 100 |||||||||||||||||||| Sbjct: 7016820 tccctcctctctttctcctc 7016839
>gb|AC091073.3|AC091073 Homo sapiens chromosome 15 clone RP11-138E16 map 15q21.1, complete sequence Length = 194350 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 79 tctccctcctctctttctcctccc 102 |||||||||||||||||||||||| Sbjct: 59939 tctccctcctctctttctcctccc 59962
>gb|AC122903.4| Mus musculus BAC clone RP23-44N5 from chromosome 1, complete sequence Length = 169832 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 79 tctccctcctctctttctcctccctct 105 |||| |||||||||||||||||||||| Sbjct: 139224 tctctctcctctctttctcctccctct 139198
>gb|AC125396.4| Mus musculus BAC clone RP24-69M4 from chromosome 16, complete sequence Length = 179186 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 79 tctccctcctctctttctcctccctct 105 ||||||||||||||| ||||||||||| Sbjct: 45949 tctccctcctctcttcctcctccctct 45975
>gb|AC124519.2| Mus musculus BAC clone RP23-393I12 from 1, complete sequence Length = 195739 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 79 tctccctcctctctttctcctccctct 105 |||| |||||||||||||||||||||| Sbjct: 1626 tctctctcctctctttctcctccctct 1600
>emb|AL663074.13| Human DNA sequence from clone RP5-930J4 on chromosome 1 Contains the 5' end of the KIF17 gene for kinesin family member 17, three novel genes, the 3' end of gene HP1-BP74 and two CpG islands, complete sequence Length = 85781 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 18 ccccacagctctcctttctctct 40 ||||||||||||||||||||||| Sbjct: 59003 ccccacagctctcctttctctct 58981
>gb|AF492849.1| Echinococcus multilocularis clone EmTriple83 microsatellite sequence Length = 216 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 138 ctctctctctcccaccaccacca 160 ||||||||||||||||||||||| Sbjct: 134 ctctctctctcccaccaccacca 156
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 339 gacggagctcaggctcgggctgccggg 365 ||||||||| ||||||||||||||||| Sbjct: 25359297 gacggagctgaggctcgggctgccggg 25359323
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 81 tccctcctctctttctcctccctctat 107 ||||||||||| ||||||||||||||| Sbjct: 21418049 tccctcctctccttctcctccctctat 21418023 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 cgggaggcggcgccgaggcgg 382 ||||||||||||||||||||| Sbjct: 32937080 cgggaggcggcgccgaggcgg 32937100 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 ctcccaccaccaccatctcc 165 |||||||||||||||||||| Sbjct: 5528391 ctcccaccaccaccatctcc 5528410
>gb|AF083344.2|AF083344 Triticum aestivum heat shock protein 101 kDa (HSP101) mRNA, complete cds Length = 2821 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 367 ggcggcgccgaggcggccaaggccgggaaga 397 ||||||| ||||||||||||||||| ||||| Sbjct: 2738 ggcggcggcgaggcggccaaggccgtgaaga 2768
>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0496H05 Length = 147817 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 81 tccctcctctctttctcctccctctat 107 ||||||||||| ||||||||||||||| Sbjct: 139987 tccctcctctccttctcctccctctat 139961
>dbj|AP003075.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468H06 Length = 155031 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 81 tccctcctctctttctcctccctctat 107 ||||||||||| ||||||||||||||| Sbjct: 59435 tccctcctctccttctcctccctctat 59409
>dbj|AK073361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027E22, full insert sequence Length = 1165 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 339 gacggagctcaggctcgggctgccggg 365 ||||||||| ||||||||||||||||| Sbjct: 143 gacggagctgaggctcgggctgccggg 169
>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full insert sequence Length = 1545 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 512 ccgcggccgctgaccccgagaagccacctgctcccaaggcaca 554 |||| ||||| ||||||||||||||| |||||||||||||| Sbjct: 569 ccgccgccgccgaccccgagaagccaagggctcccaaggcaca 611
>gb|AC109198.9| Mus musculus chromosome 15, clone RP23-31G10, complete sequence Length = 207069 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 418 gacttgaagctgacgctgcccac 440 ||||||||||||||||||||||| Sbjct: 165328 gacttgaagctgacgctgcccac 165306
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 339 gacggagctcaggctcgggctgccggg 365 ||||||||| ||||||||||||||||| Sbjct: 25287473 gacggagctgaggctcgggctgccggg 25287499
>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152914 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 339 gacggagctcaggctcgggctgccggg 365 ||||||||| ||||||||||||||||| Sbjct: 26107 gacggagctgaggctcgggctgccggg 26133
>emb|AL138784.30| Human DNA sequence from clone RP5-1102M4 on chromosome 1, complete sequence Length = 150434 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 18 ccccacagctctcctttctctct 40 ||||||||||||||||||||||| Sbjct: 82075 ccccacagctctcctttctctct 82053
>ref|NM_153786.1| Mus musculus vestigial like 2 homolog (Drosophila) (Vgll2), mRNA Length = 1483 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 355 gggctgccgggaggcggcgccgaggc 380 ||||||||||||| |||||||||||| Sbjct: 822 gggctgccgggagccggcgccgaggc 797
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 139 tctctctctcccaccaccacca 160 |||||||||||||||||||||| Sbjct: 466505 tctctctctcccaccaccacca 466526
>ref|XM_545380.1| PREDICTED: Canis familiaris similar to Histone H1.2 (H1d) (LOC488258), mRNA Length = 648 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 490 aaggccaagaggccggcagaggccgcggccgctg 523 ||||||||||||||||| || |||||||||||| Sbjct: 67 aaggccaagaggccggccaagtccgcggccgctg 100
>gb|AC132426.3| Mus musculus BAC clone RP23-312J19 from chromosome 2, complete sequence Length = 189633 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 80 ctccctcctctctttctcctccctct 105 |||||||||||||||| ||||||||| Sbjct: 108562 ctccctcctctctttcccctccctct 108537
>gb|AC153950.8| Mus musculus 10 BAC RP24-444M16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 193809 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 355 gggctgccgggaggcggcgccgaggc 380 ||||||||||||| |||||||||||| Sbjct: 55838 gggctgccgggagccggcgccgaggc 55863
>dbj|AK048390.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130057C21 product:TRANSCRIPTION COFACTOR VESTIGIAL-LIKE 2 PROTEIN homolog [Homo sapiens], full insert sequence Length = 1499 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 355 gggctgccgggaggcggcgccgaggc 380 ||||||||||||| |||||||||||| Sbjct: 978 gggctgccgggagccggcgccgaggc 953
>dbj|AK052987.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930008K19 product:TRANSCRIPTION COFACTOR VESTIGIAL-LIKE 2 PROTEIN homolog [Homo sapiens], full insert sequence Length = 1494 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 355 gggctgccgggaggcggcgccgaggc 380 ||||||||||||| |||||||||||| Sbjct: 978 gggctgccgggagccggcgccgaggc 953
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 ctctcccaccaccaccatctcc 165 |||||||||||||||||||||| Sbjct: 21525991 ctctcccaccaccaccatctcc 21526012 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 ggaggcggcgccgaggcggc 383 |||||||||||||||||||| Sbjct: 12241065 ggaggcggcgccgaggcggc 12241084
>emb|AJ578054.1|MMU578054 Mus musculus mRNA for VITO1 protein Length = 1484 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 355 gggctgccgggaggcggcgccgaggc 380 ||||||||||||| |||||||||||| Sbjct: 824 gggctgccgggagccggcgccgaggc 799
>gb|AC019178.7| Homo sapiens BAC clone RP11-235L22 from 2, complete sequence Length = 107330 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 139 tctctctctcccaccaccaccatctc 164 |||||||||||| ||||||||||||| Sbjct: 14766 tctctctctccccccaccaccatctc 14791
>gb|AF542181.1| Mus musculus transcription co-factor vestigial-like 2 protein mRNA, complete cds Length = 1483 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 355 gggctgccgggaggcggcgccgaggc 380 ||||||||||||| |||||||||||| Sbjct: 822 gggctgccgggagccggcgccgaggc 797
>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0489D11 Length = 150757 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 ctctcccaccaccaccatctcc 165 |||||||||||||||||||||| Sbjct: 87601 ctctcccaccaccaccatctcc 87622
>emb|AL928811.8| Mouse DNA sequence from clone RP23-74P23 on chromosome 2, complete sequence Length = 222061 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 80 ctccctcctctctttctcctccctct 105 |||||||||||||||| ||||||||| Sbjct: 102111 ctccctcctctctttcccctccctct 102086
>ref|NM_100443.4| Arabidopsis thaliana inositol or phosphatidylinositol phosphatase AT1G05630 transcript variant AT1G05630.1 mRNA, complete cds Length = 3888 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 ctctctctctcccaccaccac 158 ||||||||||||||||||||| Sbjct: 39 ctctctctctcccaccaccac 59
>gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940135D9, complete sequence Length = 93659 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 467 gcaagccggagccggcagccgacaaggcc 495 ||||||||||| |||| |||||||||||| Sbjct: 68471 gcaagccggagtcggccgccgacaaggcc 68443
>ref|XM_463451.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1434 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 cgggaggcggcgccgaggcgg 382 ||||||||||||||||||||| Sbjct: 1313 cgggaggcggcgccgaggcgg 1333
>gb|AC034265.9| Mus musculus chromosome 1, clone RP23-180K2, complete sequence Length = 218310 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 acagctctcctttctctctct 42 ||||||||||||||||||||| Sbjct: 24773 acagctctcctttctctctct 24753
>ref|XM_419164.1| PREDICTED: Gallus gallus similar to calcium-binding tyrosine phosphorylation-regulated protein isoform b; fibrousheathin II; testis-specific calcium-binding protein CBP86 (LOC421078), mRNA Length = 1182 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 143 tctctcccaccaccaccatctccta 167 ||||| ||||||||||||||||||| Sbjct: 730 tctcttccaccaccaccatctccta 754
>gb|AC133934.3| Mus musculus BAC clone RP24-361B1 from chromosome 13, complete sequence Length = 135967 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 ctccctcctctctttctcctc 100 ||||||||||||||||||||| Sbjct: 46016 ctccctcctctctttctcctc 46036
>ref|NM_028785.3| Mus musculus dedicator of cytokinesis 8 (Dock8), mRNA Length = 7810 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 aagctgacgctgcccaccggc 444 ||||||||||||||||||||| Sbjct: 5200 aagctgacgctgcccaccggc 5180
>gb|AC132319.3| Mus musculus BAC clone RP24-258I12 from chromosome 19, complete sequence Length = 193053 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 aagctgacgctgcccaccggc 444 ||||||||||||||||||||| Sbjct: 162761 aagctgacgctgcccaccggc 162781
>gb|AC003090.1| Homo sapiens BAC clone CTA-241I2 from 7, complete sequence Length = 94255 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 tctctaccaccccaccagcag 58 ||||||||||||||||||||| Sbjct: 80043 tctctaccaccccaccagcag 80063
>gb|AC146016.2| Pan troglodytes BAC clone RP43-131D21 from 7, complete sequence Length = 169393 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 tctctaccaccccaccagcag 58 ||||||||||||||||||||| Sbjct: 38588 tctctaccaccccaccagcag 38608
>emb|CR938729.13| Mouse DNA sequence from clone DN-164L21 on chromosome 3, complete sequence Length = 133279 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ctcctctctttctcctccctc 104 ||||||||||||||||||||| Sbjct: 107101 ctcctctctttctcctccctc 107081
>emb|AL109942.13|HSJ473J16 Human DNA sequence from clone RP3-473J16 on chromosome 6q25.3-26 Contains 3' end of the MAP3K4 gene for mitogen-activated protein kinase kinase kinase 4 (MTK1, MEKK4, MAPKKK4, KIAA0213, homolog of yeast SSK2/SSK22 MAP kinase kinase kinase), the gene for lysophosphatidic acid acyltransferase-delta (LPAAT-delta) (FLJ23628, contains mRNA DKFZp434M038) and the gene for hypothetical protein FLJ23112 (DKFZP566E2324), complete sequence Length = 176217 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 catctccctcctctctttctcctcc 101 ||||||||||||||| ||||||||| Sbjct: 123241 catctccctcctctcattctcctcc 123265
>gb|AY152833.1| Felis catus clone BAC 244e2 major histocompatiblity complex classical class II region, partial sequence Length = 147595 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ttcttggttcctctctctctc 148 ||||||||||||||||||||| Sbjct: 32251 ttcttggttcctctctctctc 32271
>gb|AY152831.1| Felis catus clone PAC 6B1 major histocompatiblity complex classical class II region, partial sequence Length = 60089 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ttcttggttcctctctctctc 148 ||||||||||||||||||||| Sbjct: 55824 ttcttggttcctctctctctc 55844
>gb|AC144487.1| Gasterosteus aculeatus clone CH213-160O9, complete sequence Length = 181162 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 417 tgacttgaagctgacgctgcc 437 ||||||||||||||||||||| Sbjct: 131546 tgacttgaagctgacgctgcc 131526
>emb|AL645566.15| Mouse DNA sequence from clone RP23-398M13 on chromosome 11 Contains a CpG island, complete sequence Length = 192808 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 tctccctcctctctttctcct 99 ||||||||||||||||||||| Sbjct: 54736 tctccctcctctctttctcct 54716
>gb|AC116991.2| Homo sapiens chromosome 3 clone RP11-264M9, complete sequence Length = 152794 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 tctccctcctctctttctcct 99 ||||||||||||||||||||| Sbjct: 53117 tctccctcctctctttctcct 53137
>gb|AC013268.5| Homo sapiens BAC clone RP11-322F4 from 2, complete sequence Length = 206457 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 tctccctcctctctttctcct 99 ||||||||||||||||||||| Sbjct: 44181 tctccctcctctctttctcct 44201
>dbj|AK028968.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732475D14 product:similar to CDNA FLJ30931 FIS, CLONE FEBRA2006873, WEAKLY SIMILAR TO TRG PROTEIN [Homo sapiens], full insert sequence Length = 2869 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 aagctgacgctgcccaccggc 444 ||||||||||||||||||||| Sbjct: 258 aagctgacgctgcccaccggc 238
>dbj|AK004816.2| Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200017A24 product:similar to CDNA FLJ30931 FIS, CLONE FEBRA2006873, WEAKLY SIMILAR TO TRG PROTEIN [Homo sapiens], full insert sequence Length = 2694 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 aagctgacgctgcccaccggc 444 ||||||||||||||||||||| Sbjct: 338 aagctgacgctgcccaccggc 318
>gb|AC108938.3| Homo sapiens BAC clone RP11-701A10 from 2, complete sequence Length = 175222 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 tctccctcctctctttctcct 99 ||||||||||||||||||||| Sbjct: 19356 tctccctcctctctttctcct 19336
>gb|BC030316.1| Mus musculus dedicator of cytokinesis 8, mRNA (cDNA clone IMAGE:5371956), complete cds Length = 3684 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 aagctgacgctgcccaccggc 444 ||||||||||||||||||||| Sbjct: 2191 aagctgacgctgcccaccggc 2171
>gb|AC091971.4| Homo sapiens chromosome 5 clone RP11-511F22, complete sequence Length = 70759 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 catctccctcctctctttctc 97 ||||||||||||||||||||| Sbjct: 29060 catctccctcctctctttctc 29040
>gb|AC025572.13|AC025572 Homo sapiens 3 BAC RP11-58O15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191510 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 tctccctcctctctttctcct 99 ||||||||||||||||||||| Sbjct: 11486 tctccctcctctctttctcct 11466
>gb|AC112229.4| Homo sapiens BAC clone RP13-1039J1 from 2, complete sequence Length = 154279 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 tctccctcctctctttctcct 99 ||||||||||||||||||||| Sbjct: 69275 tctccctcctctctttctcct 69295
>dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0010B10 Length = 155263 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 cgggaggcggcgccgaggcgg 382 ||||||||||||||||||||| Sbjct: 3308 cgggaggcggcgccgaggcgg 3328
>gb|BC043470.1| Mus musculus dedicator of cytokinesis 8, mRNA (cDNA clone IMAGE:5150248), partial cds Length = 3366 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 aagctgacgctgcccaccggc 444 ||||||||||||||||||||| Sbjct: 1003 aagctgacgctgcccaccggc 983
>gb|BC055295.1| Mus musculus dedicator of cytokinesis 8, mRNA (cDNA clone IMAGE:4485826), partial cds Length = 3157 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 aagctgacgctgcccaccggc 444 ||||||||||||||||||||| Sbjct: 1031 aagctgacgctgcccaccggc 1011
>dbj|AK131180.1| Mus musculus mRNA for mFLJ00346 protein Length = 3778 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 aagctgacgctgcccaccggc 444 ||||||||||||||||||||| Sbjct: 2163 aagctgacgctgcccaccggc 2143
>emb|AJ243213.1|HSA243213 Homo sapiens partial 5-HT4 receptor gene, exons 2 to 5 Length = 130985 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 catctccctcctctctttctc 97 ||||||||||||||||||||| Sbjct: 60019 catctccctcctctctttctc 59999
>gb|BC090415.1| Danio rerio cDNA clone IMAGE:6912350 Length = 1330 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 cccacagctctcctttctctc 39 ||||||||||||||||||||| Sbjct: 1066 cccacagctctcctttctctc 1046
>gb|AC132456.5| Mus musculus BAC clone RP23-134L6 from 1, complete sequence Length = 204402 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 acagctctcctttctctctct 42 ||||||||||||||||||||| Sbjct: 89478 acagctctcctttctctctct 89498
>emb|BX279523.5| Zebrafish DNA sequence from clone CH211-63O20 in linkage group 20, complete sequence Length = 165073 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 cccacagctctcctttctctc 39 ||||||||||||||||||||| Sbjct: 160951 cccacagctctcctttctctc 160971
>gb|AC091332.8| Mus musculus chromosome 17, clone RP23-12K1, complete sequence Length = 216370 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 acttcatctccctcctctctttctc 97 ||||||| ||||||||||||||||| Sbjct: 77830 acttcatatccctcctctctttctc 77854
>emb|AL671987.12| Mouse DNA sequence from clone RP23-246L17 on chromosome 3, complete sequence Length = 183333 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ctcctctctttctcctccctc 104 ||||||||||||||||||||| Sbjct: 121252 ctcctctctttctcctccctc 121232
>gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genomic sequence, complete sequence Length = 103223 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 ctctctctctcccaccaccac 158 ||||||||||||||||||||| Sbjct: 63880 ctctctctctcccaccaccac 63900
>gb|AC102156.16| Mus musculus chromosome 18, clone RP23-334L7, complete sequence Length = 221632 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 cctctctttctcctccctct 105 |||||||||||||||||||| Sbjct: 166177 cctctctttctcctccctct 166196
>gb|AC134402.9| Mus musculus chromosome 5, clone RP24-301D19, complete sequence Length = 199834 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 tctccctcctctctttctcctccc 102 |||||||||||||||||| ||||| Sbjct: 90606 tctccctcctctctttcttctccc 90583
>gb|AC138671.16| Mus musculus chromosome 5, clone RP23-443N7, complete sequence Length = 196443 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 tcttggttcctctctctctc 148 |||||||||||||||||||| Sbjct: 155651 tcttggttcctctctctctc 155632
>gb|AC167364.3| Mus musculus BAC clone RP23-41J3 from chromosome 12, complete sequence Length = 204336 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 tctccctcctctctttctcctccc 102 |||||||||||||| ||||||||| Sbjct: 166125 tctccctcctctctctctcctccc 166148
>gb|AC167360.3| Mus musculus BAC clone RP24-174G8 from chromosome 12, complete sequence Length = 171120 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 tctccctcctctctttctcctccc 102 |||||||||||||| ||||||||| Sbjct: 91459 tctccctcctctctctctcctccc 91482
>ref|XM_466171.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1074 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 gggaggcggcgccgaggcgg 382 |||||||||||||||||||| Sbjct: 337 gggaggcggcgccgaggcgg 318
>ref|XM_450686.1| Oryza sativa (japonica cultivar-group), mRNA Length = 983 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ggaggcggcgccgaggcggc 383 |||||||||||||||||||| Sbjct: 141 ggaggcggcgccgaggcggc 122
>gb|AC101776.7| Mus musculus chromosome 7, clone RP24-118K20, complete sequence Length = 177972 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 cctctctttctcctccctct 105 |||||||||||||||||||| Sbjct: 94211 cctctctttctcctccctct 94192
>gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0019E05, complete sequence Length = 129021 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 tccctcctctctttctcctc 100 |||||||||||||||||||| Sbjct: 44600 tccctcctctctttctcctc 44581
>gb|AC116853.12| Mus musculus chromosome 1, clone RP24-400M20, complete sequence Length = 188514 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 gctatgaggacaccattgacttga 424 |||||||||||||||||| ||||| Sbjct: 167734 gctatgaggacaccattgccttga 167711
>gb|BC077321.1| Xenopus laevis MGC80275 protein, mRNA (cDNA clone MGC:80275 IMAGE:5073384), complete cds Length = 2574 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 cagctctcctttctctctct 42 |||||||||||||||||||| Sbjct: 685 cagctctcctttctctctct 666
>ref|XM_614998.2| PREDICTED: Bos taurus similar to otoancorin isoform 1 (LOC535025), partial mRNA Length = 1532 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ccctcctctctttctcctcc 101 |||||||||||||||||||| Sbjct: 835 ccctcctctctttctcctcc 854
>gb|AC134611.4| Mus musculus BAC clone RP23-98D8 from chromosome 15, complete sequence Length = 198894 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 ttcttggttcctctctctctccca 151 ||||||||||||| |||||||||| Sbjct: 186623 ttcttggttcctccctctctccca 186646
>gb|AC091268.2| Rattus norvegicus strain Brown Norway clone RP31-536L14, complete sequence Length = 148631 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 tcctctctttctcctccctc 104 |||||||||||||||||||| Sbjct: 37131 tcctctctttctcctccctc 37112
>gb|BC072089.1| Xenopus laevis cDNA clone IMAGE:4406891, partial cds Length = 3372 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 ctctctctcccaccaccaccatct 163 ||||||||||||||| |||||||| Sbjct: 1518 ctctctctcccaccatcaccatct 1495
>gb|AC134433.3| Mus musculus BAC clone RP24-405A4 from chromosome Y, complete sequence Length = 124148 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ctctcctttctctctctacc 45 |||||||||||||||||||| Sbjct: 71087 ctctcctttctctctctacc 71068
>gb|AC145392.2| Mus musculus BAC clone RP24-171E5 from chromosome Y, complete sequence Length = 162238 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ctctcctttctctctctacc 45 |||||||||||||||||||| Sbjct: 152750 ctctcctttctctctctacc 152769
>gb|AC127306.3| Mus musculus BAC clone RP23-290H17 from chromosome 7, complete sequence Length = 204478 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 ccctcctctctttctcctccctct 105 ||||| |||||||||||||||||| Sbjct: 37520 ccctcttctctttctcctccctct 37497
>gb|AC166371.4| Mus musculus BAC clone CH25-488C17 from chromosome 12, complete sequence Length = 117908 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 tctccctcctctctttctcctccc 102 |||||||||||||| ||||||||| Sbjct: 46367 tctccctcctctctctctcctccc 46390
>gb|AC073846.6| Homo sapiens BAC clone RP11-622P13 from 7, complete sequence Length = 123004 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 ccctcctctctttctcctccctct 105 ||||||||||||||||| |||||| Sbjct: 117976 ccctcctctctttctcccccctct 117953
>gb|AC134870.4| Mus musculus BAC clone RP23-166E8 from chromosome 7, complete sequence Length = 165349 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ctctctctctcccaccacca 157 |||||||||||||||||||| Sbjct: 81111 ctctctctctcccaccacca 81092
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 ccggcagaggccgcggccgc 521 |||||||||||||||||||| Sbjct: 1910963 ccggcagaggccgcggccgc 1910944
>emb|CT009717.9| Mouse DNA sequence from clone RP23-216H9 on chromosome 13, complete sequence Length = 220233 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 tccctcctctctttctcctc 100 |||||||||||||||||||| Sbjct: 17111 tccctcctctctttctcctc 17092
>gb|AC091504.3| Pan troglodytes clone RP43-13M21, complete sequence Length = 139130 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 ccctcctctctttctcctccctct 105 |||||||||| ||||||||||||| Sbjct: 58190 ccctcctctccttctcctccctct 58167
>gb|AC126410.12| Mus musculus chromosome 5, clone RP23-368H6, complete sequence Length = 187058 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 tctccctcctctctttctcctccc 102 |||||||||||||||||| ||||| Sbjct: 167551 tctccctcctctctttcttctccc 167574
>gb|AC113433.8| Oryza sativa chromosome 3 BAC OSJNBb0108E08 genomic sequence, complete sequence Length = 129167 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 cctcctctctttctcctccctcta 106 |||||||||||||||||| ||||| Sbjct: 82722 cctcctctctttctcctctctcta 82699
>emb|AM040278.1| Capsicum chinense mRNA for auxin induced protein (aux/iaa gene) Length = 1778 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 acggagctcaggctcgggct 359 |||||||||||||||||||| Sbjct: 480 acggagctcaggctcgggct 499
>emb|AL807761.8| Human DNA sequence from clone RP11-196I18 on chromosome 9 Contains the 5' end of a novel gene (FLJ40387), a novel pseudogene, a MMRP19 pseudogene and a novel gene, complete sequence Length = 103861 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ctctctctctcccaccacca 157 |||||||||||||||||||| Sbjct: 16778 ctctctctctcccaccacca 16759
>emb|AL590229.3| Human DNA sequence from clone RP11-192B18 on chromosome Xq21.1-21.33, complete sequence Length = 171847 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ctccctcctctctttctcct 99 |||||||||||||||||||| Sbjct: 10267 ctccctcctctctttctcct 10248
>emb|AL360157.12| Human DNA sequence from clone RP11-801I18 on chromosome 6q14.2-16.1 Contains part of a novel gene, complete sequence Length = 197431 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ctctctttctcctccctcta 106 |||||||||||||||||||| Sbjct: 107008 ctctctttctcctccctcta 106989
>emb|AL137795.10| Human DNA sequence from clone RP5-1096P7 on chromosome 1p36.31-36.33 Contains STSs and GSSs, complete sequence Length = 119806 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 ccccacagctctcctttctctctc 41 ||||||| |||||||||||||||| Sbjct: 60534 ccccacaactctcctttctctctc 60557
>gb|AC113633.5| Rattus norvegicus 4 BAC CH230-350N19 (Children's Hospital Oakland Research Institute) complete sequence Length = 133392 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 tcctctctttctcctccctc 104 |||||||||||||||||||| Sbjct: 68191 tcctctctttctcctccctc 68210
>gb|BC100166.1| Xenopus laevis cDNA clone MGC:114614 IMAGE:4408019, complete cds Length = 4321 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 ctctctctcccaccaccaccatct 163 ||||||||||||||| |||||||| Sbjct: 1512 ctctctctcccaccatcaccatct 1489
>emb|BX572096.1| Prochlorococcus marinus MIT9313 complete genome; segment 2/7 Length = 349323 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tggttcctctctctctccca 151 |||||||||||||||||||| Sbjct: 76170 tggttcctctctctctccca 76189
>ref|NM_001016983.2| Xenopus tropicalis cell division cycle 2-like 1 (PITSLRE proteins) (cdc2l1), mRNA Length = 2733 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 cagctctcctttctctctct 42 |||||||||||||||||||| Sbjct: 697 cagctctcctttctctctct 678
>gb|AC108863.4| Homo sapiens chromosome 8, clone CTD-2544N14, complete sequence Length = 199218 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cccaccaccaccatctccta 167 |||||||||||||||||||| Sbjct: 61927 cccaccaccaccatctccta 61908
>gb|AC129908.4| Homo sapiens chromosome 18, clone RP11-1147P1, complete sequence Length = 190809 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 tctctctctcccaccaccaccatc 162 ||||| |||||||||||||||||| Sbjct: 3050 tctctgtctcccaccaccaccatc 3073
>emb|AL589737.11| Mouse DNA sequence from clone RP23-43L14 on chromosome 13, complete sequence Length = 202855 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 tcttggttcctctctctctc 148 |||||||||||||||||||| Sbjct: 46320 tcttggttcctctctctctc 46301
>gb|AC153008.4| Mus musculus BAC clone RP23-457I7 from chromosome 15, complete sequence Length = 171878 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 ttcttggttcctctctctctccca 151 ||||||||||||| |||||||||| Sbjct: 49909 ttcttggttcctccctctctccca 49932
>gb|AC107612.4| Homo sapiens X BAC RP11-265D5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 93889 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 138 ctctctctctcccaccaccaccatctcc 165 ||||||||||||||||||| ||| |||| Sbjct: 15261 ctctctctctcccaccacccccaactcc 15288
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 ggcaagccggagccggcagc 485 |||||||||||||||||||| Sbjct: 2516092 ggcaagccggagccggcagc 2516073
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 cggcgccgaggcggccaagg 388 |||||||||||||||||||| Sbjct: 4634698 cggcgccgaggcggccaagg 4634679
>gb|AC094019.2| Homo sapiens chromosome 3 clone RP11-345J6, complete sequence Length = 198146 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ctccctcctctctttctcctccct 103 ||||||||||| |||||||||||| Sbjct: 131003 ctccctcctctttttctcctccct 131026
>gb|AE011797.1| Xanthomonas axonopodis pv. citri str. 306, section 175 of 469 of the complete genome Length = 10238 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 ccggcagaggccgcggccgc 521 |||||||||||||||||||| Sbjct: 7646 ccggcagaggccgcggccgc 7627
>gb|AC025571.20| Homo sapiens 3 BAC RP11-515C21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159902 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 138 ctctctctctcccaccaccaccatctcc 165 ||||||||||||| ||||||||| |||| Sbjct: 39453 ctctctctctccctccaccaccacctcc 39480
>gb|AF097363.1| Triticum aestivum heat shock protein 101 (Hsp101b) mRNA, complete cds Length = 3107 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 370 ggcgccgaggcggccaaggccgggaaga 397 |||| ||||||||||||||||| ||||| Sbjct: 2788 ggcggcgaggcggccaaggccgtgaaga 2815
>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11, complete sequence Length = 123620 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 tccctcctctctttctcctc 100 |||||||||||||||||||| Sbjct: 63440 tccctcctctctttctcctc 63421
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 gcgccgaggcggccaaggcc 390 |||||||||||||||||||| Sbjct: 4391626 gcgccgaggcggccaaggcc 4391607
>gb|AC104741.2| Homo sapiens chromosome 3 clone RP11-228H5, complete sequence Length = 168433 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ctccctcctctctttctcct 99 |||||||||||||||||||| Sbjct: 120728 ctccctcctctctttctcct 120747
>gb|AC015711.11| Homo sapiens, clone RP11-47G3, complete sequence Length = 172676 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ctccctcctctctttctcct 99 |||||||||||||||||||| Sbjct: 140348 ctccctcctctctttctcct 140329
>gb|AC104083.3| Homo sapiens BAC clone RP11-588K22 from 4, complete sequence Length = 196537 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ctctctctcccaccaccacc 159 |||||||||||||||||||| Sbjct: 63948 ctctctctcccaccaccacc 63929
>gb|AC068181.9| Homo sapiens chromosome 15, clone RP11-673C5, complete sequence Length = 185255 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ctccctcctctctttctcct 99 |||||||||||||||||||| Sbjct: 47416 ctccctcctctctttctcct 47397
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 acgctgcccaccggcggcat 449 |||||||||||||||||||| Sbjct: 1668425 acgctgcccaccggcggcat 1668444
>gb|AF417472.1|AF417472 Xenopus laevis cardiac myosin-binding protein C mRNA, complete cds Length = 4305 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 ctctctctcccaccaccaccatct 163 ||||||||||||||| |||||||| Sbjct: 1510 ctctctctcccaccatcaccatct 1487
>gb|AC159823.2| Mus musculus BAC clone RP23-113F14 from chromosome 12, complete sequence Length = 212532 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tccctcctctctttctcctccctc 104 |||||||||||| ||||||||||| Sbjct: 157724 tccctcctctctctctcctccctc 157701
>gb|AC153361.5| Mus musculus BAC clone RP23-291L20 from chromosome 10, complete sequence Length = 212761 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ccaccaccaccatctcctaa 168 |||||||||||||||||||| Sbjct: 163462 ccaccaccaccatctcctaa 163443
>gb|AC159274.2| Mus musculus BAC clone RP23-405C6 from chromosome 12, complete sequence Length = 200974 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tccctcctctctttctcctccctc 104 |||||||||||| ||||||||||| Sbjct: 17801 tccctcctctctctctcctccctc 17778
>gb|AC156832.2| Mus musculus BAC clone RP24-212B22 from chromosome 9, complete sequence Length = 181683 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 tcttggttcctctctctctc 148 |||||||||||||||||||| Sbjct: 112351 tcttggttcctctctctctc 112332
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 gcaagccggagccggcagcc 486 |||||||||||||||||||| Sbjct: 342622 gcaagccggagccggcagcc 342641
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 cgccgaggcggccaaggccg 391 |||||||||||||||||||| Sbjct: 1496954 cgccgaggcggccaaggccg 1496935
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 ggaggcggcgccgaggcggc 383 |||||||||||||||||||| Sbjct: 26248489 ggaggcggcgccgaggcggc 26248508
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 gggaggcggcgccgaggcgg 382 |||||||||||||||||||| Sbjct: 20843630 gggaggcggcgccgaggcgg 20843649 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 tctccctcctctctttctcctccc 102 ||||||||||||| |||||||||| Sbjct: 14449025 tctccctcctctcattctcctccc 14449048
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold Length = 1888123 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 tcctctctttctcctccctc 104 |||||||||||||||||||| Sbjct: 1242595 tcctctctttctcctccctc 1242576
>gb|AC154242.1| Mus musculus BAC clone RP24-171L20 from chromosome 16, complete sequence Length = 156152 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 tccctcctctctttctcctc 100 |||||||||||||||||||| Sbjct: 53740 tccctcctctctttctcctc 53721
>gb|AC154472.2| Mus musculus BAC clone RP24-120L6 from chromosome 12, complete sequence Length = 155996 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 tctccctcctctctttctcc 98 |||||||||||||||||||| Sbjct: 92645 tctccctcctctctttctcc 92664
>gb|AC017079.5| Homo sapiens BAC clone RP11-462M9 from 2, complete sequence Length = 176075 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 catctccctcctctctttct 96 |||||||||||||||||||| Sbjct: 73070 catctccctcctctctttct 73089
>gb|AC138356.3| Homo sapiens chromosome 8, clone RP11-863K10, complete sequence Length = 190274 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cctctctctctcccaccacc 156 |||||||||||||||||||| Sbjct: 23015 cctctctctctcccaccacc 22996
>gb|AC130304.12| Homo sapiens chromosome 8, clone RP11-205M5, complete sequence Length = 161953 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cctctctctctcccaccacc 156 |||||||||||||||||||| Sbjct: 119248 cctctctctctcccaccacc 119229
>gb|AC093332.10| Homo sapiens chromosome 18, clone RP11-802O5, complete sequence Length = 112270 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 tctctctctcccaccaccaccatc 162 ||||| |||||||||||||||||| Sbjct: 98576 tctctgtctcccaccaccaccatc 98599
>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455H11 Length = 101607 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 ggaggcggcgccgaggcggc 383 |||||||||||||||||||| Sbjct: 23117 ggaggcggcgccgaggcggc 23136
>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1015E06 Length = 164583 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 ctcccaccaccaccatctcc 165 |||||||||||||||||||| Sbjct: 125231 ctcccaccaccaccatctcc 125250
>gb|AY350626.1| Lobelia flexuosa internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 643 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 ccgggaggcggcgccgaggc 380 |||||||||||||||||||| Sbjct: 200 ccgggaggcggcgccgaggc 181
>dbj|AK199366.1| Mus musculus cDNA, clone:Y1G0130P17, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000022782, based on BLAT search Length = 391 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 ccagcagagagagcattcac 71 |||||||||||||||||||| Sbjct: 246 ccagcagagagagcattcac 265
>dbj|AB189640.1| Pagrus major TIMP-2 mRNA for tissue inhibitor of metalloproteinase, complete cds Length = 767 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cctctctctctcccaccacc 156 |||||||||||||||||||| Sbjct: 201 cctctctctctcccaccacc 182
>gb|AC093475.9| Mus musculus chromosome 1, clone RP23-54K22, complete sequence Length = 248543 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ctctcctttctctctctacc 45 |||||||||||||||||||| Sbjct: 10986 ctctcctttctctctctacc 11005
>dbj|AP004134.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_C12 Length = 116758 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 tctccctcctctctttctcctccc 102 ||||||||||||| |||||||||| Sbjct: 57523 tctccctcctctcattctcctccc 57546
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 ggaggcggcgccgaggcggc 383 |||||||||||||||||||| Sbjct: 24619 ggaggcggcgccgaggcggc 24638
>dbj|AP004038.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_H01 Length = 121377 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 gggaggcggcgccgaggcgg 382 |||||||||||||||||||| Sbjct: 86091 gggaggcggcgccgaggcgg 86110
>emb|AL671865.11| Mouse DNA sequence from clone RP23-312B13 on chromosome X, complete sequence Length = 226471 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tccctcctctctttctcctc 100 |||||||||||||||||||| Sbjct: 161802 tccctcctctctttctcctc 161821
>gb|AC005774.1|AC005774 Homo sapiens chromosome 16, BAC clone 26O3 (LANL), complete sequence Length = 164538 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 atcacaaggcatcttgcata 187 |||||||||||||||||||| Sbjct: 108175 atcacaaggcatcttgcata 108194
>gb|AC117709.16| Mus musculus chromosome 8, clone RP23-475N7, complete sequence Length = 187186 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ctccctcctctctttctcct 99 |||||||||||||||||||| Sbjct: 60047 ctccctcctctctttctcct 60028
>ref|NM_210851.1| Eremothecium gossypii AFL051Wp (AFL051W), mRNA Length = 1608 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 gcaagccggagccggcagcc 486 |||||||||||||||||||| Sbjct: 54 gcaagccggagccggcagcc 73
>gb|AC007585.15|AC007585 Mus musculus BAC GSMB-250J8 (Genome Systems Mouse BAC Library) complete sequence Length = 106482 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ctctcctttctctctctacc 45 |||||||||||||||||||| Sbjct: 71365 ctctcctttctctctctacc 71346
>dbj|AK064804.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D13, full insert sequence Length = 1176 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ggaggcggcgccgaggcggc 383 |||||||||||||||||||| Sbjct: 141 ggaggcggcgccgaggcggc 122
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 ggaggcggcgccgaggcggc 383 |||||||||||||||||||| Sbjct: 140347 ggaggcggcgccgaggcggc 140366
>emb|X95927.1|RNCFTR7 R.norvegicus CFTR gene Length = 4787 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 tcctctctttctcctccctc 104 |||||||||||||||||||| Sbjct: 1604 tcctctctttctcctccctc 1585
>emb|CR942612.2| Xenopus tropicalis finished cDNA, clone TNeu122g07 Length = 2338 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 cagctctcctttctctctct 42 |||||||||||||||||||| Sbjct: 287 cagctctcctttctctctct 268
>emb|CR848321.2| Xenopus tropicalis finished cDNA, clone TNeu071o08 Length = 2733 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 cagctctcctttctctctct 42 |||||||||||||||||||| Sbjct: 697 cagctctcctttctctctct 678
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 cggcgccgaggcggccaagg 388 |||||||||||||||||||| Sbjct: 4638645 cggcgccgaggcggccaagg 4638626
>dbj|AP002492.3| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2172L23, complete sequence Length = 52000 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 137 cctctctctctcccaccaccacca 160 |||||||||| ||||||||||||| Sbjct: 423 cctctctctcacccaccaccacca 400
>dbj|AP001148.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-762L8, complete sequences Length = 169340 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 137 cctctctctctcccaccaccacca 160 |||||||||| ||||||||||||| Sbjct: 167613 cctctctctcacccaccaccacca 167590
>gb|AC159275.6| Mus musculus BAC clone RP23-367C13 from chromosome 8, complete sequence Length = 195034 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 tccctcctctctttctcctc 100 |||||||||||||||||||| Sbjct: 131222 tccctcctctctttctcctc 131203
>gb|AC117640.14| Mus musculus chromosome 5, clone RP23-228I1, complete sequence Length = 138354 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 tcttggttcctctctctctc 148 |||||||||||||||||||| Sbjct: 40791 tcttggttcctctctctctc 40810
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 cggcgccgaggcggccaagg 388 |||||||||||||||||||| Sbjct: 2209949 cggcgccgaggcggccaagg 2209930
>emb|AL023580.1|HS372K1 Human DNA sequence from clone RP3-372K1 on chromosome 6q24 Contains a basic transcription factor (BTF3) pseudogene, the gene for a possible ortholog of murine oligodendrocyte transcription factor 3 (Olig3) and four CpG islands, complete sequence Length = 147055 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 cctctctttctcctccctct 105 |||||||||||||||||||| Sbjct: 28373 cctctctttctcctccctct 28392
>gb|AC132224.3| Mus musculus BAC clone RP24-554P12 from 1, complete sequence Length = 154996 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ctctcctttctctctctacc 45 |||||||||||||||||||| Sbjct: 103366 ctctcctttctctctctacc 103385
>emb|CT033760.5| Mouse DNA sequence from clone RP23-155H10 on chromosome 16, complete sequence Length = 222006 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 tccctcctctctttctcctc 100 |||||||||||||||||||| Sbjct: 172552 tccctcctctctttctcctc 172533
>gb|AC154248.2| Mus musculus BAC clone RP24-182I14 from chromosome 13, complete sequence Length = 188542 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 tccctcctctctttctcctc 100 |||||||||||||||||||| Sbjct: 186427 tccctcctctctttctcctc 186408
>dbj|AP004496.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT11C13, TM0029a, complete sequence Length = 53909 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 ctcccaccaccaccatctcc 165 |||||||||||||||||||| Sbjct: 33983 ctcccaccaccaccatctcc 33964
>gb|DQ277648.1| Equus caballus dopamine receptor D4 (DRD4) gene, exons 1 through 4 and partial cds Length = 2871 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 ggaggcggcgccgaggcggc 383 |||||||||||||||||||| Sbjct: 2697 ggaggcggcgccgaggcggc 2716
>gb|AC171204.1| Mus musculus BAC clone RP23-312J21 from chromosome 9, complete sequence Length = 223399 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 ctttctctctctaccacccc 50 |||||||||||||||||||| Sbjct: 14944 ctttctctctctaccacccc 14963
>gb|AC158942.7| Mus musculus chromosome 5, clone RP23-240A11, complete sequence Length = 194039 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 tcttggttcctctctctctc 148 |||||||||||||||||||| Sbjct: 175960 tcttggttcctctctctctc 175979
>emb|AL627123.13| Mouse DNA sequence from clone RP23-351I23 on chromosome 4, complete sequence Length = 185022 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 cctctctttctcctccctct 105 |||||||||||||||||||| Sbjct: 26838 cctctctttctcctccctct 26819
>gb|L26098.1|RATCFTRAAA Rattus norvegicus mRNA, exon 1 Length = 1472 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 tcctctctttctcctccctc 104 |||||||||||||||||||| Sbjct: 511 tcctctctttctcctccctc 492
>emb|AL844881.5| Mouse DNA sequence from clone RP23-244B19 on chromosome 2, complete sequence Length = 219340 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 tcctctctttctcctccctc 104 |||||||||||||||||||| Sbjct: 9004 tcctctctttctcctccctc 8985
>emb|AL603682.36| Mouse DNA sequence from clone RP23-235J5 on chromosome 11, complete sequence Length = 211680 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 74 cttcatctccctcctctctttctcctccctct 105 |||| |||| ||||||||||||||||| |||| Sbjct: 192272 cttcctctctctcctctctttctcctctctct 192241
>dbj|AP000501.1| Homo sapiens genomic DNA, chromosome 8p11.2, clone:91h23 to 9-41 Length = 178348 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cctctctctctcccaccacc 156 |||||||||||||||||||| Sbjct: 149694 cctctctctctcccaccacc 149675
>dbj|AP000426.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1107E3 Length = 239116 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ctctcctttctctctctaccaccc 49 ||||||||||||||| |||||||| Sbjct: 220723 ctctcctttctctctgtaccaccc 220700
>dbj|AP001207.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1562D12 Length = 153936 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ctctcctttctctctctaccaccc 49 ||||||||||||||| |||||||| Sbjct: 21942 ctctcctttctctctgtaccaccc 21919 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,229,836 Number of Sequences: 3902068 Number of extensions: 10229836 Number of successful extensions: 198799 Number of sequences better than 10.0: 185 Number of HSP's better than 10.0 without gapping: 193 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 195751 Number of HSP's gapped (non-prelim): 3039 length of query: 554 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 531 effective length of database: 17,143,297,704 effective search space: 9103091080824 effective search space used: 9103091080824 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
