ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart55h08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_482956.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1218 Score = 216 bits (109), Expect = 6e-53 Identities = 157/173 (90%) Strand = Plus / Plus Query: 114 tggtgaccatcctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcc 173 |||| ||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 59 tggtcaccgtcctgagcatcgacggcggcggcgtcagagggatcatcccggccaccatcc 118 Query: 174 tcgccttccttgagaaagagcttcagaaactggacggggcggacgctaggatcgcggact 233 |||||||||||||||||||||| || |||||||| || |||| ||||||||||| |||| Sbjct: 119 tcgccttccttgagaaagagctccaaaaactggatggtccggatgctaggatcgctgact 178 Query: 234 acttcgacgtcatcgccggcacgagcaccggcggccttttgacggtgatgctc 286 ||||||||||| ||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 179 acttcgacgtcgtcgccggcacgagcaccggtggcctcctgacggcgatgctc 231 Score = 65.9 bits (33), Expect = 1e-07 Identities = 99/121 (81%) Strand = Plus / Plus Query: 414 ggatggtgaccgggcccaagtacaatggcaagtacctccaatcgctgctccgtgagcgcc 473 ||||||||| || || |||||| | |||||||||||||| ||||||||||| ||| | Sbjct: 359 ggatggtgagtggcccaaagtacgacggcaagtacctccattcgctgctccgagagaagc 418 Query: 474 tcggcgagacgaggctggacggggccctcaccagcctggtcatcccaaccttcgacatcg 533 ||||||| |||||||||||| ||| || || | | |||| || || ||||||||||||| Sbjct: 419 tcggcgacacgaggctggacaaggcgctgacgaacgtggttattcccaccttcgacatcg 478 Query: 534 c 534 | Sbjct: 479 c 479
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 114 tggtgaccatcctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcc 173 |||| ||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 23541240 tggtcaccgtcctgagcatcgacggcggcggcgtcagagggatcatcccggccaccatcc 23541181 Query: 174 tcgccttccttgagaaagagct 195 |||||||||||||||||||||| Sbjct: 23541180 tcgccttccttgagaaagagct 23541159 Score = 125 bits (63), Expect = 2e-25 Identities = 144/171 (84%) Strand = Plus / Plus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcctt 184 ||||||||||| |||||||||||| | ||||||||||||| |||||||| || ||||| Sbjct: 17656550 ctgagcatcgacggcggcggcgtgcgcgggatcatcccggggaccatcctggcgttcctg 17656609 Query: 185 gagaaagagcttcagaaactggacggggcggacgctaggatcgcggactacttcgacgtc 244 ||| | |||| ||| | ||||||||| ||| || ||| | |||||||||||||||||| Sbjct: 17656610 gaggagaagctgcaggagctggacgggccggcggcgagggtggcggactacttcgacgtc 17656669 Query: 245 atcgccggcacgagcaccggcggccttttgacggtgatgctcgcggcgccc 295 |||||||| |||||||| ||||| || |||||| ||||||||||||||| Sbjct: 17656670 atcgccgggacgagcacgggcgggctggtgacggccatgctcgcggcgccc 17656720 Score = 117 bits (59), Expect = 4e-23 Identities = 122/143 (85%) Strand = Plus / Minus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcctt 184 ||||||||||| ||||||||||| | || |||||||||| ||||||||||||| ||| Sbjct: 23497729 ctgagcatcgacggcggcggcgtccgcggcatcatcccgggcaccatcctcgccagcctc 23497670 Query: 185 gagaaagagcttcagaaactggacggggcggacgctaggatcgcggactacttcgacgtc 244 ||| | |||| ||||| || ||||| || ||||| |||||||| |||||||||||||| Sbjct: 23497669 gaggagaagctgcagaagctagacggcgccgacgcgaggatcgccgactacttcgacgta 23497610 Query: 245 atcgccggcacgagcaccggcgg 267 |||||||| |||||||||||||| Sbjct: 23497609 atcgccgggacgagcaccggcgg 23497587 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 198 agaaactggacggggcggacgctaggatcgcggactacttcgacgtcatcgccggcacga 257 |||||||||| || |||| ||||||||||| ||||||||||||||| |||||||||||| Sbjct: 23541061 agaaactggatggtccggatgctaggatcgctgactacttcgacgtcgtcgccggcacga 23541002 Query: 258 gcaccggcggccttttgacggtgatgctc 286 ||||||| ||||| |||||| ||||||| Sbjct: 23541001 gcaccggtggcctcctgacggcgatgctc 23540973 Score = 93.7 bits (47), Expect = 6e-16 Identities = 119/143 (83%) Strand = Plus / Minus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcctt 184 ||||||||||| |||||||||||| | || |||||||||| |||||||||||| ||||| Sbjct: 23487018 ctgagcatcgacggcggcggcgtgcgcggcatcatcccgggcaccatcctcgcgttcctg 23486959 Query: 185 gagaaagagcttcagaaactggacggggcggacgctaggatcgcggactacttcgacgtc 244 ||| | | || ||| | |||||||| | || ||| || |||| ||||||||||||| Sbjct: 23486958 gaggagaaactgcaggagctggacggccccgaggctcggctcgccaactacttcgacgtg 23486899 Query: 245 atcgccggcacgagcaccggcgg 267 |||||||| |||||||||||||| Sbjct: 23486898 atcgccgggacgagcaccggcgg 23486876 Score = 65.9 bits (33), Expect = 1e-07 Identities = 99/121 (81%) Strand = Plus / Minus Query: 414 ggatggtgaccgggcccaagtacaatggcaagtacctccaatcgctgctccgtgagcgcc 473 ||||||||| || || |||||| | |||||||||||||| ||||||||||| ||| | Sbjct: 23540675 ggatggtgagtggcccaaagtacgacggcaagtacctccattcgctgctccgagagaagc 23540616 Query: 474 tcggcgagacgaggctggacggggccctcaccagcctggtcatcccaaccttcgacatcg 533 ||||||| |||||||||||| ||| || || | | |||| || || ||||||||||||| Sbjct: 23540615 tcggcgacacgaggctggacaaggcgctgacgaacgtggttattcccaccttcgacatcg 23540556 Query: 534 c 534 | Sbjct: 23540555 c 23540555
>dbj|AP003917.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1666_A04 Length = 90097 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 114 tggtgaccatcctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcc 173 |||| ||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 21015 tggtcaccgtcctgagcatcgacggcggcggcgtcagagggatcatcccggccaccatcc 20956 Query: 174 tcgccttccttgagaaagagct 195 |||||||||||||||||||||| Sbjct: 20955 tcgccttccttgagaaagagct 20934 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 198 agaaactggacggggcggacgctaggatcgcggactacttcgacgtcatcgccggcacga 257 |||||||||| || |||| ||||||||||| ||||||||||||||| |||||||||||| Sbjct: 20836 agaaactggatggtccggatgctaggatcgctgactacttcgacgtcgtcgccggcacga 20777 Query: 258 gcaccggcggccttttgacggtgatgctc 286 ||||||| ||||| |||||| ||||||| Sbjct: 20776 gcaccggtggcctcctgacggcgatgctc 20748 Score = 65.9 bits (33), Expect = 1e-07 Identities = 99/121 (81%) Strand = Plus / Minus Query: 414 ggatggtgaccgggcccaagtacaatggcaagtacctccaatcgctgctccgtgagcgcc 473 ||||||||| || || |||||| | |||||||||||||| ||||||||||| ||| | Sbjct: 20450 ggatggtgagtggcccaaagtacgacggcaagtacctccattcgctgctccgagagaagc 20391 Query: 474 tcggcgagacgaggctggacggggccctcaccagcctggtcatcccaaccttcgacatcg 533 ||||||| |||||||||||| ||| || || | | |||| || || ||||||||||||| Sbjct: 20390 tcggcgacacgaggctggacaaggcgctgacgaacgtggttattcccaccttcgacatcg 20331 Query: 534 c 534 | Sbjct: 20330 c 20330
>ref|XM_482084.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1329 Score = 125 bits (63), Expect = 2e-25 Identities = 144/171 (84%) Strand = Plus / Plus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcctt 184 ||||||||||| |||||||||||| | ||||||||||||| |||||||| || ||||| Sbjct: 175 ctgagcatcgacggcggcggcgtgcgcgggatcatcccggggaccatcctggcgttcctg 234 Query: 185 gagaaagagcttcagaaactggacggggcggacgctaggatcgcggactacttcgacgtc 244 ||| | |||| ||| | ||||||||| ||| || ||| | |||||||||||||||||| Sbjct: 235 gaggagaagctgcaggagctggacgggccggcggcgagggtggcggactacttcgacgtc 294 Query: 245 atcgccggcacgagcaccggcggccttttgacggtgatgctcgcggcgccc 295 |||||||| |||||||| ||||| || |||||| ||||||||||||||| Sbjct: 295 atcgccgggacgagcacgggcgggctggtgacggccatgctcgcggcgccc 345
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 125 bits (63), Expect = 2e-25 Identities = 144/171 (84%) Strand = Plus / Plus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcctt 184 ||||||||||| |||||||||||| | ||||||||||||| |||||||| || ||||| Sbjct: 133200 ctgagcatcgacggcggcggcgtgcgcgggatcatcccggggaccatcctggcgttcctg 133259 Query: 185 gagaaagagcttcagaaactggacggggcggacgctaggatcgcggactacttcgacgtc 244 ||| | |||| ||| | ||||||||| ||| || ||| | |||||||||||||||||| Sbjct: 133260 gaggagaagctgcaggagctggacgggccggcggcgagggtggcggactacttcgacgtc 133319 Query: 245 atcgccggcacgagcaccggcggccttttgacggtgatgctcgcggcgccc 295 |||||||| |||||||| ||||| || |||||| ||||||||||||||| Sbjct: 133320 atcgccgggacgagcacgggcgggctggtgacggccatgctcgcggcgccc 133370
>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_C03 Length = 118339 Score = 125 bits (63), Expect = 2e-25 Identities = 144/171 (84%) Strand = Plus / Plus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcctt 184 ||||||||||| |||||||||||| | ||||||||||||| |||||||| || ||||| Sbjct: 41939 ctgagcatcgacggcggcggcgtgcgcgggatcatcccggggaccatcctggcgttcctg 41998 Query: 185 gagaaagagcttcagaaactggacggggcggacgctaggatcgcggactacttcgacgtc 244 ||| | |||| ||| | ||||||||| ||| || ||| | |||||||||||||||||| Sbjct: 41999 gaggagaagctgcaggagctggacgggccggcggcgagggtggcggactacttcgacgtc 42058 Query: 245 atcgccggcacgagcaccggcggccttttgacggtgatgctcgcggcgccc 295 |||||||| |||||||| ||||| || |||||| ||||||||||||||| Sbjct: 42059 atcgccgggacgagcacgggcgggctggtgacggccatgctcgcggcgccc 42109
>ref|XM_482944.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1701 Score = 117 bits (59), Expect = 4e-23 Identities = 122/143 (85%) Strand = Plus / Plus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcctt 184 ||||||||||| ||||||||||| | || |||||||||| ||||||||||||| ||| Sbjct: 336 ctgagcatcgacggcggcggcgtccgcggcatcatcccgggcaccatcctcgccagcctc 395 Query: 185 gagaaagagcttcagaaactggacggggcggacgctaggatcgcggactacttcgacgtc 244 ||| | |||| ||||| || ||||| || ||||| |||||||| |||||||||||||| Sbjct: 396 gaggagaagctgcagaagctagacggcgccgacgcgaggatcgccgactacttcgacgta 455 Query: 245 atcgccggcacgagcaccggcgg 267 |||||||| |||||||||||||| Sbjct: 456 atcgccgggacgagcaccggcgg 478
>dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_E05 Length = 126978 Score = 117 bits (59), Expect = 4e-23 Identities = 122/143 (85%) Strand = Plus / Minus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcctt 184 ||||||||||| ||||||||||| | || |||||||||| ||||||||||||| ||| Sbjct: 89144 ctgagcatcgacggcggcggcgtccgcggcatcatcccgggcaccatcctcgccagcctc 89085 Query: 185 gagaaagagcttcagaaactggacggggcggacgctaggatcgcggactacttcgacgtc 244 ||| | |||| ||||| || ||||| || ||||| |||||||| |||||||||||||| Sbjct: 89084 gaggagaagctgcagaagctagacggcgccgacgcgaggatcgccgactacttcgacgta 89025 Query: 245 atcgccggcacgagcaccggcgg 267 |||||||| |||||||||||||| Sbjct: 89024 atcgccgggacgagcaccggcgg 89002 Score = 93.7 bits (47), Expect = 6e-16 Identities = 119/143 (83%) Strand = Plus / Minus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcctt 184 ||||||||||| |||||||||||| | || |||||||||| |||||||||||| ||||| Sbjct: 78433 ctgagcatcgacggcggcggcgtgcgcggcatcatcccgggcaccatcctcgcgttcctg 78374 Query: 185 gagaaagagcttcagaaactggacggggcggacgctaggatcgcggactacttcgacgtc 244 ||| | | || ||| | |||||||| | || ||| || |||| ||||||||||||| Sbjct: 78373 gaggagaaactgcaggagctggacggccccgaggctcggctcgccaactacttcgacgtg 78314 Query: 245 atcgccggcacgagcaccggcgg 267 |||||||| |||||||||||||| Sbjct: 78313 atcgccgggacgagcaccggcgg 78291
>dbj|AK108679.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-B01, full insert sequence Length = 1701 Score = 117 bits (59), Expect = 4e-23 Identities = 122/143 (85%) Strand = Plus / Plus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcctt 184 ||||||||||| ||||||||||| | || |||||||||| ||||||||||||| ||| Sbjct: 336 ctgagcatcgacggcggcggcgtccgcggcatcatcccgggcaccatcctcgccagcctc 395 Query: 185 gagaaagagcttcagaaactggacggggcggacgctaggatcgcggactacttcgacgtc 244 ||| | |||| ||||| || ||||| || ||||| |||||||| |||||||||||||| Sbjct: 396 gaggagaagctgcagaagctagacggcgccgacgcgaggatcgccgactacttcgacgta 455 Query: 245 atcgccggcacgagcaccggcgg 267 |||||||| |||||||||||||| Sbjct: 456 atcgccgggacgagcaccggcgg 478
>dbj|AK058531.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-A08, full insert sequence Length = 1618 Score = 111 bits (56), Expect = 3e-21 Identities = 119/140 (85%) Strand = Plus / Plus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcctt 184 ||||||||||| ||||||||| | | || |||||||||||||||||||||||| ||| Sbjct: 296 ctgagcatcgacggcggcggcatccgcggcctcatcccggccaccatcctcgcctgcctc 355 Query: 185 gagaaagagcttcagaaactggacggggcggacgctaggatcgcggactacttcgacgtc 244 ||| |||| ||| | ||||||||| |||| || ||||||||||||||||||||||| Sbjct: 356 gaggccaagctccaggagctggacgggccggaggcgaggatcgcggactacttcgacgtg 415 Query: 245 atcgccggcacgagcaccgg 264 |||||||| ||||||||||| Sbjct: 416 atcgccgggacgagcaccgg 435
>ref|XM_482940.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1629 Score = 93.7 bits (47), Expect = 6e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcctt 184 ||||||||||| |||||||||||| | || |||||||||| |||||||||||| ||||| Sbjct: 274 ctgagcatcgacggcggcggcgtgcgcggcatcatcccgggcaccatcctcgcgttcctg 333 Query: 185 gagaaagagcttcagaaactggacggggcggacgctaggatcgcggactacttcgacgtc 244 ||| | | || ||| | |||||||| | || ||| || |||| ||||||||||||| Sbjct: 334 gaggagaaactgcaggagctggacggccccgaggctcggctcgccaactacttcgacgtg 393 Query: 245 atcgccggcacgagcaccggcgg 267 |||||||| |||||||||||||| Sbjct: 394 atcgccgggacgagcaccggcgg 416
>dbj|AK101432.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038K22, full insert sequence Length = 1629 Score = 93.7 bits (47), Expect = 6e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcctt 184 ||||||||||| |||||||||||| | || |||||||||| |||||||||||| ||||| Sbjct: 274 ctgagcatcgacggcggcggcgtgcgcggcatcatcccgggcaccatcctcgcgttcctg 333 Query: 185 gagaaagagcttcagaaactggacggggcggacgctaggatcgcggactacttcgacgtc 244 ||| | | || ||| | |||||||| | || ||| || |||| ||||||||||||| Sbjct: 334 gaggagaaactgcaggagctggacggccccgaggctcggctcgccaactacttcgacgtg 393 Query: 245 atcgccggcacgagcaccggcgg 267 |||||||| |||||||||||||| Sbjct: 394 atcgccgggacgagcaccggcgg 416
>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0042J05, complete sequence Length = 150295 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 203 ctggacggggcggacgctaggatcgcggactacttcgacgtcatcgccggcacgagcacc 262 ||||||||| |||| || ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 7321 ctggacgggccggaggcgaggatcgcggactacttcgacgtgatcgccgggacgagcacc 7380 Query: 263 gg 264 || Sbjct: 7381 gg 7382 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 203 ctggacggggcggacgctaggatcgcggactacttcgacgtcatcgccggcacgagcacc 262 ||||||||| |||| || |||||||||||||||||||| || |||||||| ||||||||| Sbjct: 15648 ctggacgggccggaggcgaggatcgcggactacttcgatgtgatcgccgggacgagcacc 15707 Query: 263 gg 264 || Sbjct: 15708 gg 15709 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgcct 179 ||||||||||| ||||||||| | | || |||||||||||||||||||||||| Sbjct: 6878 ctgagcatcgacggcggcggcatccgcggcctcatcccggccaccatcctcgcct 6932 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 tcccggccaccatcctcgcct 179 ||||||||||||||||||||| Sbjct: 14292 tcccggccaccatcctcgcct 14312
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 203 ctggacggggcggacgctaggatcgcggactacttcgacgtcatcgccggcacgagcacc 262 ||||||||| |||| || ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 22991318 ctggacgggccggaggcgaggatcgcggactacttcgacgtgatcgccgggacgagcacc 22991377 Query: 263 gg 264 || Sbjct: 22991378 gg 22991379 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 203 ctggacggggcggacgctaggatcgcggactacttcgacgtcatcgccggcacgagcacc 262 ||||||||| |||| || |||||||||||||||||||| || |||||||| ||||||||| Sbjct: 22999645 ctggacgggccggaggcgaggatcgcggactacttcgatgtgatcgccgggacgagcacc 22999704 Query: 263 gg 264 || Sbjct: 22999705 gg 22999706 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgcct 179 ||||||||||| ||||||||| | | || |||||||||||||||||||||||| Sbjct: 22990875 ctgagcatcgacggcggcggcatccgcggcctcatcccggccaccatcctcgcct 22990929 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 tcccggccaccatcctcgcct 179 ||||||||||||||||||||| Sbjct: 22998289 tcccggccaccatcctcgcct 22998309
>dbj|AK067827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120O20, full insert sequence Length = 2434 Score = 83.8 bits (42), Expect = 6e-13 Identities = 90/106 (84%) Strand = Plus / Plus Query: 159 tcccggccaccatcctcgccttccttgagaaagagcttcagaaactggacggggcggacg 218 ||||||||||||||||||||| ||| ||| |||| ||| | |||| |||| |||| | Sbjct: 188 tcccggccaccatcctcgcctgcctcgaggccaagctccaggagctgggcgggccggagg 247 Query: 219 ctaggatcgcggactacttcgacgtcatcgccggcacgagcaccgg 264 | |||||||||||||||||||| || |||||||| ||||||||||| Sbjct: 248 cgaggatcgcggactacttcgatgtgatcgccgggacgagcaccgg 293
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 203 ctggacggggcggacgctaggatcgcggactacttcgacgtcatcgccggcacgagcacc 262 ||||||||| |||| || ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 23301228 ctggacgggccggaggcgaggatcgcggactacttcgacgtgatcgccgggacgagcacc 23301287 Query: 263 gg 264 || Sbjct: 23301288 gg 23301289 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 203 ctggacggggcggacgctaggatcgcggactacttcgacgtcatcgccggcacgagcacc 262 ||||||||| |||| || |||||||||||||||||||| || |||||||| ||||||||| Sbjct: 23309555 ctggacgggccggaggcgaggatcgcggactacttcgatgtgatcgccgggacgagcacc 23309614 Query: 263 gg 264 || Sbjct: 23309615 gg 23309616 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgcct 179 ||||||||||| ||||||||| | | || |||||||||||||||||||||||| Sbjct: 23300785 ctgagcatcgacggcggcggcatccgcggcctcatcccggccaccatcctcgcct 23300839 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 tcccggccaccatcctcgcct 179 ||||||||||||||||||||| Sbjct: 23308199 tcccggccaccatcctcgcct 23308219
>dbj|AK109768.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-A03, full insert sequence Length = 1931 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 203 ctggacggggcggacgctaggatcgcggactacttcgacgtcatcgccggcacgagcacc 262 ||||||||| |||| || |||||||||||||||||||| || |||||||| ||||||||| Sbjct: 1617 ctggacgggccggaggcgaggatcgcggactacttcgatgtgatcgccgggacgagcacc 1676 Query: 263 gg 264 || Sbjct: 1677 gg 1678 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 tcccggccaccatcctcgcct 179 ||||||||||||||||||||| Sbjct: 263 tcccggccaccatcctcgcct 283
>gb|AF061282.1| Sorghum bicolor 22 kDa kafirin cluster Length = 162249 Score = 73.8 bits (37), Expect = 6e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 203 ctggacggggcggacgctaggatcgcggactacttcgacgtcatcgccggcacgagcacc 262 ||||||||| ||||||| | ||||| |||||||||||||| |||||||| ||||||||| Sbjct: 72891 ctggacgggccggacgcacgcatcgccgactacttcgacgtgatcgccgggacgagcacc 72950 Query: 263 ggcggccttttgacggtgatgctcgcggcgccc 295 |||| || ||||| |||||| ||||||||| Sbjct: 72951 ggcgcgctgctgacgtcgatgctggcggcgccc 72983 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 224 atcgcggactacttcgacgtcatcgccggcacgagcaccggcg 266 ||||| |||||||||||||| |||||||| ||||||||||||| Sbjct: 42958 atcgccgactacttcgacgtgatcgccgggacgagcaccggcg 42916 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 230 gactacttcgacgtcatcgccggcacgagcaccggcggccttttgacggtgatgctcgcg 289 |||||||||||||| |||||||| ||||||||||||| ||| | ||| |||||| ||| Sbjct: 56273 gactacttcgacgtgatcgccgggacgagcaccggcgccctgctcacgtcgatgctggcg 56332 Query: 290 gcgccc 295 |||||| Sbjct: 56333 gcgccc 56338 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Plus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatc 172 ||||||||||||||||||||| | | ||| ||||||| ||||||||| Sbjct: 72713 ctgagcatcgatggcggcggcatccgggggctcatccctgccaccatc 72760
>gb|AY105282.1| Zea mays PCO126203 mRNA sequence Length = 768 Score = 65.9 bits (33), Expect = 1e-07 Identities = 117/145 (80%) Strand = Plus / Plus Query: 122 atcctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttc 181 |||||||||||||||||||||||| | | || | |||||||| |||||| | || | | Sbjct: 184 atcctgagcatcgatggcggcggcatccgcggccttatcccggcgaccatcattgcgtac 243 Query: 182 cttgagaaagagcttcagaaactggacggggcggacgctaggatcgcggactacttcgac 241 || ||| |||| ||| | |||||||| |||||||| ||||||| ||||||||||| Sbjct: 244 ctcgaggccaagctccaggagctggacggcccggacgctcggatcgccgactacttcgat 303 Query: 242 gtcatcgccggcacgagcaccggcg 266 || || ||||| ||||||||||||| Sbjct: 304 gtgattgccgggacgagcaccggcg 328
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 230 gactacttcgacgtcatcgccggcacgagcaccggcgg 267 |||||||||||| |||||||||||||||||||||||| Sbjct: 22360991 gactacttcgactacatcgccggcacgagcaccggcgg 22360954 Score = 54.0 bits (27), Expect = 5e-04 Identities = 114/143 (79%) Strand = Plus / Plus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcctt 184 |||| |||||||||||||||| | | ||||||||||||| || | |||| ||| | Sbjct: 22405842 ctgaccatcgatggcggcggcatccgggggatcatcccgggcaaggtgctcgagttcttg 22405901 Query: 185 gagaaagagcttcagaaactggacggggcggacgctaggatcgcggactacttcgacgtc 244 ||||| ||||| ||| | ||||| ||| | || || ||| | || |||||||||||| | Sbjct: 22405902 gagaacgagctccagcagctggatgggccagaggcgaggctggccgactacttcgactac 22405961 Query: 245 atcgccggcacgagcaccggcgg 267 |||||||| |||||||||||||| Sbjct: 22405962 atcgccgggacgagcaccggcgg 22405984
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 230 gactacttcgacgtcatcgccggcacgagcaccggcgg 267 |||||||||||| |||||||||||||||||||||||| Sbjct: 22289336 gactacttcgactacatcgccggcacgagcaccggcgg 22289299 Score = 54.0 bits (27), Expect = 5e-04 Identities = 114/143 (79%) Strand = Plus / Plus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcctt 184 |||| |||||||||||||||| | | ||||||||||||| || | |||| ||| | Sbjct: 22334187 ctgaccatcgatggcggcggcatccgggggatcatcccgggcaaggtgctcgagttcttg 22334246 Query: 185 gagaaagagcttcagaaactggacggggcggacgctaggatcgcggactacttcgacgtc 244 ||||| ||||| ||| | ||||| ||| | || || ||| | || |||||||||||| | Sbjct: 22334247 gagaacgagctccagcagctggatgggccagaggcgaggctggccgactacttcgactac 22334306 Query: 245 atcgccggcacgagcaccggcgg 267 |||||||| |||||||||||||| Sbjct: 22334307 atcgccgggacgagcaccggcgg 22334329
>emb|AL731741.5|CNS08C7Q Oryza sativa chromosome 12, . BAC OJ1298_D03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109610 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 230 gactacttcgacgtcatcgccggcacgagcaccggcgg 267 |||||||||||| |||||||||||||||||||||||| Sbjct: 763 gactacttcgactacatcgccggcacgagcaccggcgg 800
>emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183414 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 230 gactacttcgacgtcatcgccggcacgagcaccggcgg 267 |||||||||||| |||||||||||||||||||||||| Sbjct: 146543 gactacttcgactacatcgccggcacgagcaccggcgg 146580 Score = 54.0 bits (27), Expect = 5e-04 Identities = 114/143 (79%) Strand = Plus / Minus Query: 125 ctgagcatcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcctt 184 |||| |||||||||||||||| | | ||||||||||||| || | |||| ||| | Sbjct: 101692 ctgaccatcgatggcggcggcatccgggggatcatcccgggcaaggtgctcgagttcttg 101633 Query: 185 gagaaagagcttcagaaactggacggggcggacgctaggatcgcggactacttcgacgtc 244 ||||| ||||| ||| | ||||| ||| | || || ||| | || |||||||||||| | Sbjct: 101632 gagaacgagctccagcagctggatgggccagaggcgaggctggccgactacttcgactac 101573 Query: 245 atcgccggcacgagcaccggcgg 267 |||||||| |||||||||||||| Sbjct: 101572 atcgccgggacgagcaccggcgg 101550
>ref|XM_470838.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1450 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 131 atcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcct 183 ||||| ||||||||| | || || ||||||||| |||||||||||||||||| Sbjct: 124 atcgacggcggcggcatcaggggcctcatcccgggcaccatcctcgccttcct 176 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 233 tacttcgacgtcatcgccggcacgagcaccggcggcct 270 ||||||||| ||||||||| || |||||||||||||| Sbjct: 226 tacttcgactgcatcgccgggaccagcaccggcggcct 263
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 131 atcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcct 183 ||||| ||||||||| | || || ||||||||| |||||||||||||||||| Sbjct: 15674992 atcgacggcggcggcatcaggggcctcatcccgggcaccatcctcgccttcct 15675044 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 225 tcgcggactacttcgacgtcatcgccggcacgagcaccggcggc 268 ||||||||||||||||| || ||||||| ||| || |||||||| Sbjct: 8124253 tcgcggactacttcgacctcgtcgccggtacgggcgccggcggc 8124296 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 233 tacttcgacgtcatcgccggcacgagcaccggcggcct 270 ||||||||| ||||||||| || |||||||||||||| Sbjct: 15675094 tacttcgactgcatcgccgggaccagcaccggcggcct 15675131
>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete sequence Length = 178748 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 131 atcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcct 183 ||||| ||||||||| | || || ||||||||| |||||||||||||||||| Sbjct: 84946 atcgacggcggcggcatcaggggcctcatcccgggcaccatcctcgccttcct 84998 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 233 tacttcgacgtcatcgccggcacgagcaccggcggcct 270 ||||||||| ||||||||| || |||||||||||||| Sbjct: 85048 tacttcgactgcatcgccgggaccagcaccggcggcct 85085
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 131 atcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcct 183 ||||| ||||||||| | || || ||||||||| |||||||||||||||||| Sbjct: 15669526 atcgacggcggcggcatcaggggcctcatcccgggcaccatcctcgccttcct 15669578 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 225 tcgcggactacttcgacgtcatcgccggcacgagcaccggcggc 268 ||||||||||||||||| || ||||||| ||| || |||||||| Sbjct: 8122088 tcgcggactacttcgacctcgtcgccggtacgggcgccggcggc 8122131 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 233 tacttcgacgtcatcgccggcacgagcaccggcggcct 270 ||||||||| ||||||||| || |||||||||||||| Sbjct: 15669628 tacttcgactgcatcgccgggaccagcaccggcggcct 15669665
>dbj|AK069809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030J03, full insert sequence Length = 1526 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 131 atcgatggcggcggcgtgagagggatcatcccggccaccatcctcgccttcct 183 ||||| ||||||||| | || || ||||||||| |||||||||||||||||| Sbjct: 197 atcgacggcggcggcatcaggggcctcatcccgggcaccatcctcgccttcct 249 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 233 tacttcgacgtcatcgccggcacgagcaccggcggcct 270 ||||||||| ||||||||| || |||||||||||||| Sbjct: 299 tacttcgactgcatcgccgggaccagcaccggcggcct 336
>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12, complete sequence Length = 195583 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 225 tcgcggactacttcgacgtcatcgccggcacgagcaccggcggc 268 ||||||||||||||||| || ||||||| ||| || |||||||| Sbjct: 55683 tcgcggactacttcgacctcgtcgccggtacgggcgccggcggc 55726
>gb|AC157953.2| Gallus gallus BAC clone CH261-93C23 from chromosome unknown, complete sequence Length = 231813 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 401 ggcacagctctggggatggtgacc 424 |||||||||||||||||||||||| Sbjct: 169283 ggcacagctctggggatggtgacc 169260
>ref|XM_658347.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5835.2), mRNA Length = 4941 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 230 gactacttcgacgtcatcgccggcac 255 |||||||||||| ||||||||||||| Sbjct: 3271 gactacttcgacctcatcgccggcac 3296
>emb|AL157396.9| Human DNA sequence from clone RP11-437J2 on chromosome 10 Contains the 3' end of the PDE6C gene for phosphodiesterase 6C, cGMP-specific, cone, alpha prime (PDEA2), the C10orf4 gene for chromosome 10 open reading frame 4 and the 5' end of the LGI1 gene for leucine-rich glioma inactivated 1, complete sequence Length = 128796 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 aaactccaaatcaatggcagcaagta 77 ||||||||||| |||||||||||||| Sbjct: 95721 aaactccaaattaatggcagcaagta 95696
>gb|AC067953.4| Homo sapiens BAC clone RP11-253E24 from 2, complete sequence Length = 91209 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 52 aaactccaaatcaatggcagcaagta 77 ||||||||||| |||||||||||||| Sbjct: 89805 aaactccaaattaatggcagcaagta 89830
>gb|AC025426.11| Homo sapiens chromosome 10 clone RP11-242G20, complete sequence Length = 153645 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 gagaaagagcttcagaaactg 205 ||||||||||||||||||||| Sbjct: 58550 gagaaagagcttcagaaactg 58530
>gb|AY242058.1| Oryza sativa (japonica cultivar-group) MONOCULM 1 (MOC1) gene, complete cds Length = 3176 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 tcgccggcacgagcaccggcg 266 ||||||||||||||||||||| Sbjct: 2247 tcgccggcacgagcaccggcg 2267
>gb|AC119995.22| Mus musculus chromosome 3, clone RP24-120B18, complete sequence Length = 182140 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 tgaataagctggtgaccatcc 125 ||||||||||||||||||||| Sbjct: 107823 tgaataagctggtgaccatcc 107843
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 tcgccggcacgagcaccggcg 266 ||||||||||||||||||||| Sbjct: 23932117 tcgccggcacgagcaccggcg 23932137
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 tcgccggcacgagcaccggcg 266 ||||||||||||||||||||| Sbjct: 61728 tcgccggcacgagcaccggcg 61748
>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04, complete sequence Length = 88553 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 caatggcaagtacctccaat 455 |||||||||||||||||||| Sbjct: 49756 caatggcaagtacctccaat 49737
>ref|XM_389184.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09008.1) partial mRNA Length = 1065 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 cggcggccttttgacggtga 281 |||||||||||||||||||| Sbjct: 273 cggcggccttttgacggtga 292
>gb|AC125202.3| Mus musculus BAC clone RP23-231N20 from chromosome 19, complete sequence Length = 207191 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 agaaagagcttcagaaactg 205 |||||||||||||||||||| Sbjct: 82006 agaaagagcttcagaaactg 81987
>gb|AC159277.3| Mus musculus BAC clone RP23-356J2 from chromosome 17, complete sequence Length = 231245 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 494 ggggccctcaccagcctggtcatc 517 |||||| ||||||||||||||||| Sbjct: 179526 ggggccatcaccagcctggtcatc 179549
>dbj|AK154827.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630107N12 product:hypothetical G-protein beta WD-40 repeat/Trp-Asp (WD) repeats profile/Quinonprotein alcohol dehydrogenase-like containing protein, full insert sequence Length = 6195 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 494 ggggccctcaccagcctggtcatc 517 |||||| ||||||||||||||||| Sbjct: 2815 ggggccatcaccagcctggtcatc 2838
>dbj|AK170906.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630208M17 product:hypothetical G-protein beta WD-40 repeat/Trp-Asp (WD) repeats profile/Trp-Asp (WD) repeats circular profile containing protein, full insert sequence Length = 3020 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 494 ggggccctcaccagcctggtcatc 517 |||||| ||||||||||||||||| Sbjct: 2609 ggggccatcaccagcctggtcatc 2632
>gb|AC009123.7| Homo sapiens chromosome 16 clone RP11-486L19, complete sequence Length = 197046 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 aagctggtgaccatcctgag 129 |||||||||||||||||||| Sbjct: 114340 aagctggtgaccatcctgag 114321
>dbj|AK036541.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830132D09 product:RIKEN cDNA 3230401M21 gene, full insert sequence Length = 4536 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 494 ggggccctcaccagcctggtcatc 517 |||||| ||||||||||||||||| Sbjct: 4029 ggggccatcaccagcctggtcatc 4052
>gb|AC127185.3| Rattus norvegicus BAC CH230-28E5 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 233648 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 494 ggggccctcaccagcctggtcatc 517 |||||| ||||||||||||||||| Sbjct: 72696 ggggccatcaccagcctggtcatc 72673
>dbj|AK014328.1| Mus musculus 14, 17 days embryo head cDNA, RIKEN full-length enriched library, clone:3230401M21 product:weakly similar to C349E10.2 (NOVEL PROTEIN) (FRAGMENT) [Homo sapiens], full insert sequence Length = 5123 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 494 ggggccctcaccagcctggtcatc 517 |||||| ||||||||||||||||| Sbjct: 1749 ggggccatcaccagcctggtcatc 1772
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 caatggcaagtacctccaat 455 |||||||||||||||||||| Sbjct: 22637218 caatggcaagtacctccaat 22637199
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cgatggcggcggcgtgagag 152 |||||||||||||||||||| Sbjct: 42808003 cgatggcggcggcgtgagag 42807984
>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1656_A11 Length = 148887 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cgatggcggcggcgtgagag 152 |||||||||||||||||||| Sbjct: 140768 cgatggcggcggcgtgagag 140749
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518C01 Length = 173555 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cgatggcggcggcgtgagag 152 |||||||||||||||||||| Sbjct: 1737 cgatggcggcggcgtgagag 1718
>ref|XM_213271.3| PREDICTED: Rattus norvegicus similar to mKIAA1924 protein (LOC287157), mRNA Length = 3214 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 494 ggggccctcaccagcctggtcatc 517 |||||| ||||||||||||||||| Sbjct: 41 ggggccatcaccagcctggtcatc 64
>gb|AC158200.2| Physcomitrella patens clone JGIASYB-1A15, complete sequence Length = 41775 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 368 ttcccacagaaagattccattttc 391 |||||||| ||||||||||||||| Sbjct: 20222 ttcccacaaaaagattccattttc 20245
>dbj|AK129465.1| Mus musculus mRNA for mKIAA1924 protein Length = 5946 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 494 ggggccctcaccagcctggtcatc 517 |||||| ||||||||||||||||| Sbjct: 2563 ggggccatcaccagcctggtcatc 2586
>dbj|AP000868.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-688B18, complete sequence Length = 181589 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ttgagaaagagcttcagaaa 202 |||||||||||||||||||| Sbjct: 60694 ttgagaaagagcttcagaaa 60675
>gb|AC151919.1| Phaeodactylum tricornutum clone JGIAHOK-13P15, complete sequence Length = 36422 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gagcatcgatggcggcggcg 146 |||||||||||||||||||| Sbjct: 25626 gagcatcgatggcggcggcg 25645
>gb|AC010551.3| Homo sapiens chromosome 16 clone RP11-558A11, complete sequence Length = 138783 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 aagctggtgaccatcctgag 129 |||||||||||||||||||| Sbjct: 5912 aagctggtgaccatcctgag 5893
>dbj|AB054690.1| Saccharomyces kluyveri Sk-FAS1 gene for fatty acid synthetase beta-subunit, complete cds Length = 8175 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tctggacaaggtgccaacaa 102 |||||||||||||||||||| Sbjct: 5136 tctggacaaggtgccaacaa 5117 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,593,658 Number of Sequences: 3902068 Number of extensions: 4593658 Number of successful extensions: 94904 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94248 Number of HSP's gapped (non-prelim): 647 length of query: 566 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 543 effective length of database: 17,143,297,704 effective search space: 9308810653272 effective search space used: 9308810653272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
