ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart55h05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197709.1| Oryza sativa (japonica cultivar-group) putative... 90 7e-15
2gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 geno... 90 7e-15
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 90 7e-15
4gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 90 7e-15
5gb|AC120985.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
6ref|XM_475511.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
7gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
8gb|AC182676.2| Populus trichocarpa clone Pop1-29E23, complete se... 42 1.6
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.6
10gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genom... 42 1.6
11emb|AL669968.10| Mouse DNA sequence from clone RP23-475F22 on ch... 42 1.6
12dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
14gb|AY685117.1| Oryza sativa (japonica cultivar-group) transcript... 42 1.6
15gb|AC155099.1| Medicago truncatula chromosome 7 BAC clone mth2-1... 40 6.1
16gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 6.1
17gb|AY660967.1| Populus tremula x Populus tremuloides Cel9A mRNA,... 40 6.1
18ref|XM_713714.1| Candida albicans SC5314 putative COPII vesicle ... 40 6.1
19ref|XM_713631.1| Candida albicans SC5314 putative COPII vesicle ... 40 6.1
20gb|AY535003.1| Populus tremuloides endo-1,4-beta-glucanase (Kor1... 40 6.1
21emb|Z69904.1|CEZK20 Caenorhabditis elegans Cosmid ZK20, complete... 40 6.1
22gb|AC132450.3| Mus musculus BAC clone RP23-187N8 from chromosome... 40 6.1
23gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.1
24gb|AY056469.1| Petromyzon marinus homeobox protein hox4x mRNA, p... 40 6.1
25ref|NM_001026897.2| Caenorhabditis elegans DAF-12 Interacting Pr... 40 6.1
26ref|NM_064084.3| Caenorhabditis elegans DAF-12 Interacting Prote... 40 6.1
27ref|NM_064083.3| Caenorhabditis elegans DAF-12 Interacting Prote... 40 6.1
28ref|NM_182101.2| Caenorhabditis elegans DAF-12 Interacting Prote... 40 6.1
29dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
30gb|AC007886.7|AC007886 Drosophila melanogaster, chromosome 3R, r... 40 6.1
31gb|AY161023.1| Sciaenops ocellatus clone SOC 421 microsatellite ... 40 6.1
32ref|NM_001011493.1| Xenopus tropicalis hypothetical LOC496993 (L... 40 6.1
33dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 6.1
34dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
35gb|AY646856.2| Sapovirus NongKhai-24/Thailand, complete genome 40 6.1
36gb|AY108045.1| Zea mays PCO088666 mRNA sequence 40 6.1
37gb|AE003772.2| Drosophila melanogaster chromosome 3R, section 11... 40 6.1
38gb|BC088882.1| Xenopus tropicalis hypothetical LOC496993, mRNA (... 40 6.1
39gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.1
40gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 6.1 
>ref|NM_197709.1| Oryza sativa (japonica cultivar-group) putative transcription
           factor (OSJNBa0010C11.4), mRNA
          Length = 1358

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 102 atggcgtcggagtgggaaatggccatgggcgtggagctcggcatgggaatgggatcgtac 161
           |||||||||||||||||||||||||||||||| || ||||||||||| ||| |  |||||
Sbjct: 195 atggcgtcggagtgggaaatggccatgggcgtcgacctcggcatggggatgagcacgtac 254

                    
Query: 162 cacaacgcc 170
           |||||||||
Sbjct: 255 cacaacgcc 263



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 383 tgggcgagctgtcggccaccaccccttccgccacgtcgtccgatcaccagacgtcgatgc 442
           ||||||||| ||||| | |||| || || ||||||||||| |||||||||||||||||||
Sbjct: 520 tgggcgagccgtcgggcgccacgccgtcggccacgtcgtcagatcaccagacgtcgatgc 579

                         
Query: 443 tctctttcgccgac 456
           |||| |||||||||
Sbjct: 580 tctccttcgccgac 593



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 313 ggcgcccacgacttcttccc 332
           ||||||||||||||||||||
Sbjct: 435 ggcgcccacgacttcttccc 454
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>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete
             sequence
          Length = 147117

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                         
Query: 102   atggcgtcggagtgggaaatggccatgggcgtggagctcggcatgggaatgggatcgtac 161
             |||||||||||||||||||||||||||||||| || ||||||||||| ||| |  |||||
Sbjct: 99392 atggcgtcggagtgggaaatggccatgggcgtcgacctcggcatggggatgagcacgtac 99451

                      
Query: 162   cacaacgcc 170
             |||||||||
Sbjct: 99452 cacaacgcc 99460



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                         
Query: 383   tgggcgagctgtcggccaccaccccttccgccacgtcgtccgatcaccagacgtcgatgc 442
             ||||||||| ||||| | |||| || || ||||||||||| |||||||||||||||||||
Sbjct: 99717 tgggcgagccgtcgggcgccacgccgtcggccacgtcgtcagatcaccagacgtcgatgc 99776

                           
Query: 443   tctctttcgccgac 456
             |||| |||||||||
Sbjct: 99777 tctccttcgccgac 99790



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   ggcgcccacgacttcttccc 332
             ||||||||||||||||||||
Sbjct: 99632 ggcgcccacgacttcttccc 99651
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                            
Query: 102      atggcgtcggagtgggaaatggccatgggcgtggagctcggcatgggaatgggatcgtac 161
                |||||||||||||||||||||||||||||||| || ||||||||||| ||| |  |||||
Sbjct: 21424379 atggcgtcggagtgggaaatggccatgggcgtcgacctcggcatggggatgagcacgtac 21424438

                         
Query: 162      cacaacgcc 170
                |||||||||
Sbjct: 21424439 cacaacgcc 21424447



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                            
Query: 383      tgggcgagctgtcggccaccaccccttccgccacgtcgtccgatcaccagacgtcgatgc 442
                ||||||||| ||||| | |||| || || ||||||||||| |||||||||||||||||||
Sbjct: 21424704 tgggcgagccgtcgggcgccacgccgtcggccacgtcgtcagatcaccagacgtcgatgc 21424763

                              
Query: 443      tctctttcgccgac 456
                |||| |||||||||
Sbjct: 21424764 tctccttcgccgac 21424777



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 313      ggcgcccacgacttcttccc 332
                ||||||||||||||||||||
Sbjct: 21424619 ggcgcccacgacttcttccc 21424638
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                            
Query: 102      atggcgtcggagtgggaaatggccatgggcgtggagctcggcatgggaatgggatcgtac 161
                |||||||||||||||||||||||||||||||| || ||||||||||| ||| |  |||||
Sbjct: 21435642 atggcgtcggagtgggaaatggccatgggcgtcgacctcggcatggggatgagcacgtac 21435701

                         
Query: 162      cacaacgcc 170
                |||||||||
Sbjct: 21435702 cacaacgcc 21435710



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                            
Query: 383      tgggcgagctgtcggccaccaccccttccgccacgtcgtccgatcaccagacgtcgatgc 442
                ||||||||| ||||| | |||| || || ||||||||||| |||||||||||||||||||
Sbjct: 21435967 tgggcgagccgtcgggcgccacgccgtcggccacgtcgtcagatcaccagacgtcgatgc 21436026

                              
Query: 443      tctctttcgccgac 456
                |||| |||||||||
Sbjct: 21436027 tctccttcgccgac 21436040



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 313      ggcgcccacgacttcttccc 332
                ||||||||||||||||||||
Sbjct: 21435882 ggcgcccacgacttcttccc 21435901
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>gb|AC120985.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1532_D06,
             complete sequence
          Length = 127150

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 399   caccaccccttccgccacgtc 419
             |||||||||||||||||||||
Sbjct: 93111 caccaccccttccgccacgtc 93131
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>ref|XM_475511.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1257

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 398 ccaccaccccttccgccacgt 418
           |||||||||||||||||||||
Sbjct: 40  ccaccaccccttccgccacgt 20
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>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01,
             complete sequence
          Length = 122768

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 398   ccaccaccccttccgccacgt 418
             |||||||||||||||||||||
Sbjct: 54876 ccaccaccccttccgccacgt 54896
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>gb|AC182676.2| Populus trichocarpa clone Pop1-29E23, complete sequence
          Length = 62085

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 352   ctccaccaccaccagcacctc 372
             |||||||||||||||||||||
Sbjct: 10813 ctccaccaccaccagcacctc 10833
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 212      ctactccgcctccgcggctgc 232
                |||||||||||||||||||||
Sbjct: 25376172 ctactccgcctccgcggctgc 25376152
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>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete
             sequence
          Length = 152828

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 212   ctactccgcctccgcggctgc 232
             |||||||||||||||||||||
Sbjct: 67188 ctactccgcctccgcggctgc 67208
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>emb|AL669968.10| Mouse DNA sequence from clone RP23-475F22 on chromosome 11 Contains a
             glyceraldehyde-3-phosphate dehydrogenase (Gapd)
             pseudogene, complete sequence
          Length = 167170

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 348   cggactccaccaccaccagcacctc 372
             |||||||||||||||||| ||||||
Sbjct: 74035 cggactccaccaccaccaccacctc 74059
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 399     caccaccccttccgccacgtc 419
               |||||||||||||||||||||
Sbjct: 7480042 caccaccccttccgccacgtc 7480062



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 398     ccaccaccccttccgccacgt 418
               |||||||||||||||||||||
Sbjct: 1099265 ccaccaccccttccgccacgt 1099285
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 212      ctactccgcctccgcggctgc 232
                |||||||||||||||||||||
Sbjct: 25467481 ctactccgcctccgcggctgc 25467461
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>gb|AY685117.1| Oryza sativa (japonica cultivar-group) transcription factor
           AP2D23-like (AP2D23) mRNA, complete cds
          Length = 1539

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 398 ccaccaccccttccgccacgt 418
           |||||||||||||||||||||
Sbjct: 40  ccaccaccccttccgccacgt 20
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>gb|AC155099.1| Medicago truncatula chromosome 7 BAC clone mth2-144f20, complete
             sequence
          Length = 132371

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   tccaccaccaccagcacctc 372
             ||||||||||||||||||||
Sbjct: 53957 tccaccaccaccagcacctc 53976



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   tccaccaccaccagcacctc 372
             ||||||||||||||||||||
Sbjct: 53438 tccaccaccaccagcacctc 53457



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   tccaccaccaccagcacctc 372
             ||||||||||||||||||||
Sbjct: 53192 tccaccaccaccagcacctc 53211
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    cacaacgccgccaacgtcaa 181
              ||||||||||||||||||||
Sbjct: 135868 cacaacgccgccaacgtcaa 135849
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>gb|AY660967.1| Populus tremula x Populus tremuloides Cel9A mRNA, complete cds
          Length = 1860

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 352  ctccaccaccaccagcacct 371
            ||||||||||||||||||||
Sbjct: 1829 ctccaccaccaccagcacct 1848
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>ref|XM_713714.1| Candida albicans SC5314 putative COPII vesicle coat component
            (CaO19_6217), mRNA
          Length = 3798

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 352  ctccaccaccaccagcacct 371
            ||||||||||||||||||||
Sbjct: 3248 ctccaccaccaccagcacct 3267
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>ref|XM_713631.1| Candida albicans SC5314 putative COPII vesicle coat component
            (CaO19_13598), mRNA
          Length = 3798

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 352  ctccaccaccaccagcacct 371
            ||||||||||||||||||||
Sbjct: 3248 ctccaccaccaccagcacct 3267
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>gb|AY535003.1| Populus tremuloides endo-1,4-beta-glucanase (Kor1) mRNA, complete cds
          Length = 2562

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 352  ctccaccaccaccagcacct 371
            ||||||||||||||||||||
Sbjct: 2091 ctccaccaccaccagcacct 2110
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>emb|Z69904.1|CEZK20 Caenorhabditis elegans Cosmid ZK20, complete sequence
          Length = 33490

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  tccaccaccaccagcacctc 372
            ||||||||||||||||||||
Sbjct: 4048 tccaccaccaccagcacctc 4029
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>gb|AC132450.3| Mus musculus BAC clone RP23-187N8 from chromosome 18, complete sequence
          Length = 201282

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 352   ctccaccaccaccagcacct 371
             ||||||||||||||||||||
Sbjct: 42616 ctccaccaccaccagcacct 42597
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 83      cgctcttctggggcgtggaa 102
               ||||||||||||||||||||
Sbjct: 2014473 cgctcttctggggcgtggaa 2014492
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>gb|AY056469.1| Petromyzon marinus homeobox protein hox4x mRNA, partial cds
          Length = 1146

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 354 ccaccaccaccagcacctcg 373
           ||||||||||||||||||||
Sbjct: 102 ccaccaccaccagcacctcg 121
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>ref|NM_001026897.2| Caenorhabditis elegans DAF-12 Interacting Protein family member
            (din-1) (din-1) mRNA, complete cds
          Length = 6751

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 353  tccaccaccaccagcacctc 372
            ||||||||||||||||||||
Sbjct: 3325 tccaccaccaccagcacctc 3344
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>ref|NM_064084.3| Caenorhabditis elegans DAF-12 Interacting Protein family member
            (din-1) (din-1) mRNA, complete cds
          Length = 7247

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 353  tccaccaccaccagcacctc 372
            ||||||||||||||||||||
Sbjct: 3821 tccaccaccaccagcacctc 3840
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>ref|NM_064083.3| Caenorhabditis elegans DAF-12 Interacting Protein family member
            (din-1) (din-1) mRNA, complete cds
          Length = 6659

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 353  tccaccaccaccagcacctc 372
            ||||||||||||||||||||
Sbjct: 3821 tccaccaccaccagcacctc 3840
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>ref|NM_182101.2| Caenorhabditis elegans DAF-12 Interacting Protein family member
            (din-1) (din-1) mRNA, complete cds
          Length = 7629

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 353  tccaccaccaccagcacctc 372
            ||||||||||||||||||||
Sbjct: 3753 tccaccaccaccagcacctc 3772
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 167      cgccgccaacgtcaacgccgcgcccatg 194
                ||||||||||| ||||||||||| ||||
Sbjct: 29820475 cgccgccaacgccaacgccgcgctcatg 29820448
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>gb|AC007886.7|AC007886 Drosophila melanogaster, chromosome 3R, region 99D-99D, BAC clone
              BACR07A18, complete sequence
          Length = 168469

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    tggagctcggcatgggaatg 152
              ||||||||||||||||||||
Sbjct: 129942 tggagctcggcatgggaatg 129961
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>gb|AY161023.1| Sciaenops ocellatus clone SOC 421 microsatellite sequence
          Length = 607

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 346 aacggactccaccaccaccagcac 369
           ||||| ||||||||||||||||||
Sbjct: 483 aacggcctccaccaccaccagcac 506
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>ref|NM_001011493.1| Xenopus tropicalis hypothetical LOC496993 (LOC496993), mRNA
          Length = 1005

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 346 aacggactccaccaccaccagcac 369
           ||||||||||| ||||||||||||
Sbjct: 642 aacggactccatcaccaccagcac 619
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 396   ggccaccaccccttccgccacgtc 419
             |||||||||||||||| |||||||
Sbjct: 24492 ggccaccaccccttcctccacgtc 24469
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>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0481E08
          Length = 171965

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 167   cgccgccaacgtcaacgccgcgcccatg 194
             ||||||||||| ||||||||||| ||||
Sbjct: 15988 cgccgccaacgccaacgccgcgctcatg 15961
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>gb|AY646856.2| Sapovirus NongKhai-24/Thailand, complete genome
          Length = 7500

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 125  catgggcgtggagctcggcatggg 148
            ||||||||||||||||| ||||||
Sbjct: 2865 catgggcgtggagctcgtcatggg 2888
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>gb|AY108045.1| Zea mays PCO088666 mRNA sequence
          Length = 871

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 394 tcggccaccaccccttccgccacg 417
           |||||||||||||||||| |||||
Sbjct: 606 tcggccaccaccccttccaccacg 583
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>gb|AE003772.2| Drosophila melanogaster chromosome 3R, section 110 of 118 of the
             complete sequence
          Length = 228443

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   tggagctcggcatgggaatg 152
             ||||||||||||||||||||
Sbjct: 43510 tggagctcggcatgggaatg 43529
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>gb|BC088882.1| Xenopus tropicalis hypothetical LOC496993, mRNA (cDNA clone
           MGC:108052 IMAGE:7003349), complete cds
          Length = 1005

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 346 aacggactccaccaccaccagcac 369
           ||||||||||| ||||||||||||
Sbjct: 642 aacggactccatcaccaccagcac 619
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 386     gcgagctgtcggccaccacc 405
               ||||||||||||||||||||
Sbjct: 3755891 gcgagctgtcggccaccacc 3755872
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 396     ggccaccaccccttccgccacgtc 419
               |||||||||||||||| |||||||
Sbjct: 1879587 ggccaccaccccttcctccacgtc 1879610


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,145,189
Number of Sequences: 3902068
Number of extensions: 3145189
Number of successful extensions: 71061
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70292
Number of HSP's gapped (non-prelim): 769
length of query: 456
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 434
effective length of database: 17,147,199,772
effective search space: 7441884701048
effective search space used: 7441884701048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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