>IF31_MOUSE (Q66JS6) Eukaryotic translation initiation factor 3 subunit 1|
           (eIF-3 alpha)
          Length = 263

 Score = 33.1 bits (74), Expect = 0.61
 Identities = 15/54 (27%), Positives = 31/54 (57%)
 Frame = +2

Query: 422 DDPISEKLRQQRLVEEADFKATAELFAKKDGSEKSLETFIPKSESDFAEYAELI 583
           ++ +++KLR ++L EE+D +   E F   + +   ++   P S  DF E+ +L+
Sbjct: 116 EEQLADKLRLKKLQEESDLELAKETFG-VNNTVYGIDAMNPSSRDDFTEFGKLL 168

>IF31_PONPY (Q5R8D1) Eukaryotic translation initiation factor 3 subunit 1|
           (eIF-3 alpha)
          Length = 259

 Score = 33.1 bits (74), Expect = 0.61
 Identities = 15/54 (27%), Positives = 31/54 (57%)
 Frame = +2

Query: 422 DDPISEKLRQQRLVEEADFKATAELFAKKDGSEKSLETFIPKSESDFAEYAELI 583
           ++ +++KLR ++L EE+D +   E F   + +   ++   P S  DF E+ +L+
Sbjct: 112 EEQLADKLRLKKLQEESDLELAKETFG-VNNTVYGIDAMNPSSRDDFTEFGKLL 164

>IF31_HUMAN (O75822) Eukaryotic translation initiation factor 3 subunit 1|
           (eIF-3 alpha) (eIF3 p35) (eIF3j)
          Length = 258

 Score = 33.1 bits (74), Expect = 0.61
 Identities = 15/54 (27%), Positives = 31/54 (57%)
 Frame = +2

Query: 422 DDPISEKLRQQRLVEEADFKATAELFAKKDGSEKSLETFIPKSESDFAEYAELI 583
           ++ +++KLR ++L EE+D +   E F   + +   ++   P S  DF E+ +L+
Sbjct: 111 EEQLADKLRLKKLQEESDLELAKETFG-VNNAVYGIDAMNPSSRDDFTEFGKLL 163

>RREB1_HUMAN (Q92766) RAS-responsive element-binding protein 1 (RREB-1)|
           (Raf-responsive zinc finger protein LZ321)
          Length = 755

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = +2

Query: 377 KQPSTSTEVVEDDVLDDPISEKLRQQRLVEEADFKATAELFAKKDGSEKSLETFIPKSES 556
           K P T  EVVE      P + +   ++L EE +  +  E  A+K  SEKS +   PK++S
Sbjct: 512 KPPETPAEVVESA----PGAGEAPAEKLAEETEGPSDGESAAEKRSSEKSDDDKKPKTDS 567

>RHAA_LACPL (Q88S51) L-rhamnose isomerase (EC 5.3.1.14)|
          Length = 427

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +2

Query: 380 QPSTSTEVVEDDVLDDPISEKLRQQRLVEEADFKATAELFAKKDGSEKSLE 532
           Q S +   + D   D+PI ++  ++RL+E  D     E+FAKK   + ++E
Sbjct: 180 QQSVNNFWIPDGFKDNPIDKQAPRERLIESLD-----EVFAKKYDEKNTIE 225


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,552,549
Number of Sequences: 219361
Number of extensions: 496409
Number of successful extensions: 1865
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1865
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)