ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart55g02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 159 bits (80), Expect = 1e-35 Identities = 168/196 (85%), Gaps = 6/196 (3%) Strand = Plus / Minus Query: 174 ggttccggcgatggaaggcggagcacagccggacgtacgccaccccggaggaagagcgcc 233 |||||||||| |||||||||||| ||| |||| |||||||||| ||| ||| ||||||| Sbjct: 22051958 ggttccggcggtggaaggcggagtacaaccggtcgtacgccacggcgggggaggagcgcc 22051899 Query: 234 accggctccgcgtctacgcgcgcaacatgcgctacatcgaggccaccaacggcgacgccg 293 ||||||||| || |||||||||||| |||| ||||||||||| || |||| || || Sbjct: 22051898 gccggctccgggtgtacgcgcgcaacgtgcggtacatcgaggcgacgaacg----cggcg 22051843 Query: 294 gcgccgggctcacctacgagctcggcgagaccgcctacaccgacctcaccagcgacgagt 353 ||| |||||| | ||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 22051842 gcg--gggctcgcgtacgagctcggcgagacggcctacaccgacctcaccaacgacgagt 22051785 Query: 354 tcacggccatgtacac 369 ||| ||||||||||| Sbjct: 22051784 tcatcgccatgtacac 22051769 Score = 48.1 bits (24), Expect = 0.029 Identities = 36/40 (90%) Strand = Plus / Minus Query: 474 aggtgtacgtgaacgagtcggccggggcgccggcgagcgt 513 |||||||| | |||||||| ||||| |||||||||||||| Sbjct: 22051664 aggtgtacttcaacgagtccgccggcgcgccggcgagcgt 22051625 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 ctctccgacgacgacgacgac 406 ||||||||||||||||||||| Sbjct: 10698869 ctctccgacgacgacgacgac 10698889 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 12704836 tctccgacgacgacgacgac 12704817 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 8578497 tctccgacgacgacgacgac 8578516
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 159 bits (80), Expect = 1e-35 Identities = 168/196 (85%), Gaps = 6/196 (3%) Strand = Plus / Minus Query: 174 ggttccggcgatggaaggcggagcacagccggacgtacgccaccccggaggaagagcgcc 233 |||||||||| |||||||||||| ||| |||| |||||||||| ||| ||| ||||||| Sbjct: 94022 ggttccggcggtggaaggcggagtacaaccggtcgtacgccacggcgggggaggagcgcc 93963 Query: 234 accggctccgcgtctacgcgcgcaacatgcgctacatcgaggccaccaacggcgacgccg 293 ||||||||| || |||||||||||| |||| ||||||||||| || |||| || || Sbjct: 93962 gccggctccgggtgtacgcgcgcaacgtgcggtacatcgaggcgacgaacg----cggcg 93907 Query: 294 gcgccgggctcacctacgagctcggcgagaccgcctacaccgacctcaccagcgacgagt 353 ||| |||||| | ||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 93906 gcg--gggctcgcgtacgagctcggcgagacggcctacaccgacctcaccaacgacgagt 93849 Query: 354 tcacggccatgtacac 369 ||| ||||||||||| Sbjct: 93848 tcatcgccatgtacac 93833 Score = 48.1 bits (24), Expect = 0.029 Identities = 36/40 (90%) Strand = Plus / Minus Query: 474 aggtgtacgtgaacgagtcggccggggcgccggcgagcgt 513 |||||||| | |||||||| ||||| |||||||||||||| Sbjct: 93728 aggtgtacttcaacgagtccgccggcgcgccggcgagcgt 93689
>gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence Length = 268433 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 308 tacgagctcggcgagaccgcctacaccgacctcaccagcgacgagttcacggccatgtac 367 ||||||||||| ||||| | |||||||||||||||| ||||||||||| |||||||||| Sbjct: 152272 tacgagctcggtgagacggagtacaccgacctcaccaccgacgagttcatggccatgtac 152331 Query: 368 ac 369 || Sbjct: 152332 ac 152333
>ref|XM_467143.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1698 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 139 cccggccaccgaggacgccgacc 161 ||||||||||||||||||||||| Sbjct: 235 cccggccaccgaggacgccgacc 213
>gb|AC116368.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0061D06, complete sequence Length = 172126 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 443 gtcgccgccgccggcggtggagg 465 ||||||||||||||||||||||| Sbjct: 59937 gtcgccgccgccggcggtggagg 59959
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 443 gtcgccgccgccggcggtggagg 465 ||||||||||||||||||||||| Sbjct: 9689740 gtcgccgccgccggcggtggagg 9689718 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 378 cgccgccgctctccgacgacgacgacgac 406 ||||||||| ||||||||||||||||||| Sbjct: 19736538 cgccgccgc-ctccgacgacgacgacgac 19736511 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cgacgacgacgacgacctgc 410 |||||||||||||||||||| Sbjct: 19222457 cgacgacgacgacgacctgc 19222476 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ctccgacgacgacgacgacc 407 |||||||||||||||||||| Sbjct: 17258217 ctccgacgacgacgacgacc 17258198 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 cgacgacgacgacgacctgc 410 |||||||||||||||||||| Sbjct: 8986471 cgacgacgacgacgacctgc 8986452 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 1161544 tctccgacgacgacgacgac 1161525
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 139 cccggccaccgaggacgccgacc 161 ||||||||||||||||||||||| Sbjct: 26650314 cccggccaccgaggacgccgacc 26650336 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 395 gacgacgacgacctgccgatgacga 419 |||||||||||||||| |||||||| Sbjct: 32023749 gacgacgacgacctgcagatgacga 32023773 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 439 cccggtcgccgccgccggcggtggaggc 466 ||||||||||||||||| ||| |||||| Sbjct: 18075206 cccggtcgccgccgccgccggcggaggc 18075233
>dbj|AP005072.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0708H12 Length = 162381 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 139 cccggccaccgaggacgccgacc 161 ||||||||||||||||||||||| Sbjct: 12344 cccggccaccgaggacgccgacc 12366
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 408 tgccgatgacgatgatcaccacc 430 ||||||||||||||||||||||| Sbjct: 3676454 tgccgatgacgatgatcaccacc 3676476 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 cgacgacgacctgccgatga 416 |||||||||||||||||||| Sbjct: 1110945 cgacgacgacctgccgatga 1110926
>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_F09 Length = 139371 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 139 cccggccaccgaggacgccgacc 161 ||||||||||||||||||||||| Sbjct: 84475 cccggccaccgaggacgccgacc 84497
>dbj|AK107591.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-A06, full insert sequence Length = 1696 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 139 cccggccaccgaggacgccgacc 161 ||||||||||||||||||||||| Sbjct: 233 cccggccaccgaggacgccgacc 211
>dbj|AK099591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043M11, full insert sequence Length = 3949 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 139 cccggccaccgaggacgccgacc 161 ||||||||||||||||||||||| Sbjct: 239 cccggccaccgaggacgccgacc 217
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 443 gtcgccgccgccggcggtggagg 465 ||||||||||||||||||||||| Sbjct: 9761437 gtcgccgccgccggcggtggagg 9761415 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 378 cgccgccgctctccgacgacgacgacgac 406 ||||||||| ||||||||||||||||||| Sbjct: 20022389 cgccgccgc-ctccgacgacgacgacgac 20022362 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cgacgacgacgacgacctgc 410 |||||||||||||||||||| Sbjct: 19382006 cgacgacgacgacgacctgc 19382025 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ctccgacgacgacgacgacc 407 |||||||||||||||||||| Sbjct: 17353403 ctccgacgacgacgacgacc 17353384 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 cgacgacgacgacgacctgc 410 |||||||||||||||||||| Sbjct: 9058134 cgacgacgacgacgacctgc 9058115 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 1159265 tctccgacgacgacgacgac 1159246
>ref|XM_507385.1| PREDICTED Oryza sativa (japonica cultivar-group), P0453G03.28 mRNA Length = 1712 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 388 ctccgacgacgacgacgacctg 409 |||||||||||||||||||||| Sbjct: 352 ctccgacgacgacgacgacctg 331
>ref|XM_506427.2| PREDICTED Oryza sativa (japonica cultivar-group), P0453G03.28 mRNA Length = 1476 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 388 ctccgacgacgacgacgacctg 409 |||||||||||||||||||||| Sbjct: 101 ctccgacgacgacgacgacctg 80
>ref|XM_476596.1| Oryza sativa (japonica cultivar-group), mRNA Length = 831 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 434 gccggcccggtcgccgccgccg 455 |||||||||||||||||||||| Sbjct: 262 gccggcccggtcgccgccgccg 283
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 391 cgacgacgacgacgacctgccg 412 |||||||||||||||||||||| Sbjct: 136671 cgacgacgacgacgacctgccg 136650
>gb|AY023133.1| Oryza sativa microsatellite MRG5458 containing (GCC)X8, closest to marker L655, genomic sequence Length = 224 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 386 ctctccgacgacgacgacgacc 407 |||||||||||||||||||||| Sbjct: 100 ctctccgacgacgacgacgacc 79
>gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0579A05, complete sequence Length = 107407 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 440 ccggtcgccgccgccggcggtg 461 |||||||||||||||||||||| Sbjct: 6928 ccggtcgccgccgccggcggtg 6949
>gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0040E06, complete sequence Length = 160907 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 391 cgacgacgacgacgacctgccg 412 |||||||||||||||||||||| Sbjct: 116938 cgacgacgacgacgacctgccg 116959
>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0084P24, complete sequence Length = 148784 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 440 ccggtcgccgccgccggcggtg 461 |||||||||||||||||||||| Sbjct: 111610 ccggtcgccgccgccggcggtg 111631
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 388 ctccgacgacgacgacgacctg 409 |||||||||||||||||||||| Sbjct: 23461638 ctccgacgacgacgacgacctg 23461659 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 434 gccggcccggtcgccgccgccg 455 |||||||||||||||||||||| Sbjct: 2100065 gccggcccggtcgccgccgccg 2100044 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ctctccgacgacgacgacga 405 |||||||||||||||||||| Sbjct: 25736878 ctctccgacgacgacgacga 25736897 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 cgacgacgacgacgacctgc 410 |||||||||||||||||||| Sbjct: 23634173 cgacgacgacgacgacctgc 23634154
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 386 ctctccgacgacgacgacgacc 407 |||||||||||||||||||||| Sbjct: 27177288 ctctccgacgacgacgacgacc 27177309 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 gtcgccgccgccggcggtgg 462 |||||||||||||||||||| Sbjct: 29512791 gtcgccgccgccggcggtgg 29512772 Score = 40.1 bits (20), Expect = 7.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 378 cgccgccgctctccgacgacgacgacga 405 ||||||||| |||||||||||||||||| Sbjct: 2961568 cgccgccgc-ctccgacgacgacgacga 2961594
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 391 cgacgacgacgacgacctgccg 412 |||||||||||||||||||||| Sbjct: 28184263 cgacgacgacgacgacctgccg 28184284 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 440 ccggtcgccgccgccggcggtg 461 |||||||||||||||||||||| Sbjct: 20273338 ccggtcgccgccgccggcggtg 20273359 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 378 cgccgccgctctccgacgacgacgacgac 406 ||||||||| ||||||| ||||||||||| Sbjct: 17093331 cgccgccgcgctccgaccacgacgacgac 17093303 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gccgctctccgacgacgacg 401 |||||||||||||||||||| Sbjct: 26895158 gccgctctccgacgacgacg 26895177 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ctccgacgacgacgacgacc 407 |||||||||||||||||||| Sbjct: 24432107 ctccgacgacgacgacgacc 24432126
>dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0637D03 Length = 180159 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 386 ctctccgacgacgacgacgacc 407 |||||||||||||||||||||| Sbjct: 34304 ctctccgacgacgacgacgacc 34325
>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0473H04 Length = 155204 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 386 ctctccgacgacgacgacgacc 407 |||||||||||||||||||||| Sbjct: 146098 ctctccgacgacgacgacgacc 146119
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 388 ctccgacgacgacgacgacctg 409 |||||||||||||||||||||| Sbjct: 22031 ctccgacgacgacgacgacctg 22052
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0495H05 Length = 205595 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 434 gccggcccggtcgccgccgccg 455 |||||||||||||||||||||| Sbjct: 184362 gccggcccggtcgccgccgccg 184341
>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453G03 Length = 144480 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 388 ctccgacgacgacgacgacctg 409 |||||||||||||||||||||| Sbjct: 81535 ctccgacgacgacgacgacctg 81556
>dbj|AK111793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090I20, full insert sequence Length = 1337 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 386 ctctccgacgacgacgacgacc 407 |||||||||||||||||||||| Sbjct: 680 ctctccgacgacgacgacgacc 701
>dbj|AK102987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116C12, full insert sequence Length = 1713 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 388 ctccgacgacgacgacgacctg 409 |||||||||||||||||||||| Sbjct: 353 ctccgacgacgacgacgacctg 332
>dbj|AK064035.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-C07, full insert sequence Length = 1476 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 388 ctccgacgacgacgacgacctg 409 |||||||||||||||||||||| Sbjct: 101 ctccgacgacgacgacgacctg 80
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 434 gccggcccggtcgccgccgccg 455 |||||||||||||||||||||| Sbjct: 55858 gccggcccggtcgccgccgccg 55837
>gb|AY110841.1| Zea mays CL908_1 mRNA sequence Length = 916 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 318 gcgagaccgcctacaccgacctcaccagcgacgagttc 355 |||||||| | | |||||||||||||||||| |||||| Sbjct: 13 gcgagaccccgttcaccgacctcaccagcgaggagttc 50
>ref|NM_188312.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1074 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 gacgacgacgacgacctgccg 412 ||||||||||||||||||||| Sbjct: 803 gacgacgacgacgacctgccg 783
>ref|XM_475113.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1701 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 378 cgccgccgctctccgacgacgacgacgac 406 ||||||||| ||||||| ||||||||||| Sbjct: 514 cgccgccgcgctccgaccacgacgacgac 486
>ref|XM_474818.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 612 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 ggtcgccgccgccggcggtgg 462 ||||||||||||||||||||| Sbjct: 153 ggtcgccgccgccggcggtgg 173
>ref|XM_470258.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 633 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 ctctccgacgacgacgacgac 406 ||||||||||||||||||||| Sbjct: 131 ctctccgacgacgacgacgac 111
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 378 cgccgccgctctccgacgacgacgacgac 406 ||||||||| ||||||| ||||||||||| Sbjct: 37466 cgccgccgcgctccgaccacgacgacgac 37438
>gb|AC150698.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072P10, complete sequence Length = 147540 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 378 cgccgccgctctccgacgacgacgacgac 406 ||||||||| ||||||||||||||||||| Sbjct: 92111 cgccgccgc-ctccgacgacgacgacgac 92084
>gb|AC134624.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041I05, complete sequence Length = 148785 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 378 cgccgccgctctccgacgacgacgacgac 406 ||||||||| ||||||||||||||||||| Sbjct: 142033 cgccgccgc-ctccgacgacgacgacgac 142006
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10, complete sequence Length = 148373 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 378 cgccgccgctctccgacgacgacgacgac 406 ||||||||| ||||||| ||||||||||| Sbjct: 86698 cgccgccgcgctccgaccacgacgacgac 86670
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 ctctccgacgacgacgacgac 406 ||||||||||||||||||||| Sbjct: 3113915 ctctccgacgacgacgacgac 3113895 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 21294372 tctccgacgacgacgacgac 21294391 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 8938511 tctccgacgacgacgacgac 8938530 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 gtcgccgccgccggcggtgg 462 |||||||||||||||||||| Sbjct: 3440533 gtcgccgccgccggcggtgg 3440514
>emb|X82071.1|PAHEMA Pseudomonas aeruginosa hemA gene, ORF2, ORF3, prf1 gene and hemM gene, strain PAO1 Length = 4781 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 ccgacgacgacgacgacctgc 410 ||||||||||||||||||||| Sbjct: 2166 ccgacgacgacgacgacctgc 2146
>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05, complete sequence Length = 101799 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 ctctccgacgacgacgacgac 406 ||||||||||||||||||||| Sbjct: 36928 ctctccgacgacgacgacgac 36908
>emb|AL606449.4|OSJN00004 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014F04, complete sequence Length = 173903 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 ggtcgccgccgccggcggtgg 462 ||||||||||||||||||||| Sbjct: 167059 ggtcgccgccgccggcggtgg 167039
>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05, complete sequence Length = 149134 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 ggtcgccgccgccggcggtgg 462 ||||||||||||||||||||| Sbjct: 51601 ggtcgccgccgccggcggtgg 51581
>emb|AJ851474.1| Gallus gallus mRNA for hypothetical protein, clone 3l20 Length = 1552 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 ggcccggtcgccgccgccggc 457 ||||||||||||||||||||| Sbjct: 97 ggcccggtcgccgccgccggc 117
>emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5 Length = 167014 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 ctctccgacgacgacgacgac 406 ||||||||||||||||||||| Sbjct: 100460 ctctccgacgacgacgacgac 100480
>ref|NM_001012544.1| Gallus gallus pyruvate dehydrogenase (lipoamide) alpha 1 (PDHA1), mRNA Length = 1552 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 ggcccggtcgccgccgccggc 457 ||||||||||||||||||||| Sbjct: 97 ggcccggtcgccgccgccggc 117
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 263 cgctacatcgaggccaccaacggcg 287 ||||||||||||||||||| ||||| Sbjct: 2716038 cgctacatcgaggccaccatcggcg 2716062
>emb|CR390703.1| Gallus gallus finished cDNA, clone ChEST602l24 Length = 685 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 ggcccggtcgccgccgccggc 457 ||||||||||||||||||||| Sbjct: 206 ggcccggtcgccgccgccggc 226
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 408 tgccgatgacgatgatcacca 428 ||||||||||||||||||||| Sbjct: 3138274 tgccgatgacgatgatcacca 3138254
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 ggtcgccgccgccggcggtgg 462 ||||||||||||||||||||| Sbjct: 6888730 ggtcgccgccgccggcggtgg 6888710 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ctctccgacgacgacgacga 405 |||||||||||||||||||| Sbjct: 28353133 ctctccgacgacgacgacga 28353152 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 21534316 tctccgacgacgacgacgac 21534335
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 379 gccgccgctctccgacgacgacgacgacc 407 ||||||||||| ||||| ||||||||||| Sbjct: 3968773 gccgccgctctgcgacgccgacgacgacc 3968801 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 1320504 tctccgacgacgacgacgac 1320485 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 1091619 tctccgacgacgacgacgac 1091600
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 ctctccgacgacgacgacgac 406 ||||||||||||||||||||| Sbjct: 3114026 ctctccgacgacgacgacgac 3114006 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 21287401 tctccgacgacgacgacgac 21287420 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 8936346 tctccgacgacgacgacgac 8936365 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 gtcgccgccgccggcggtgg 462 |||||||||||||||||||| Sbjct: 3440644 gtcgccgccgccggcggtgg 3440625
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 gacgacgacgacgacctgccg 412 ||||||||||||||||||||| Sbjct: 5639830 gacgacgacgacgacctgccg 5639810 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 39832956 tctccgacgacgacgacgac 39832975 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cgaggccaccaacggcgacg 290 |||||||||||||||||||| Sbjct: 28819283 cgaggccaccaacggcgacg 28819302 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 cggcccggtcgccgccgccg 455 |||||||||||||||||||| Sbjct: 13454919 cggcccggtcgccgccgccg 13454938
>dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489A05 Length = 158815 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 gacgacgacgacgacctgccg 412 ||||||||||||||||||||| Sbjct: 105303 gacgacgacgacgacctgccg 105283
>dbj|AP005881.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0057I13 Length = 156330 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 ctctccgacgacgacgacgac 406 ||||||||||||||||||||| Sbjct: 151181 ctctccgacgacgacgacgac 151201
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 ctctccgacgacgacgacgac 406 ||||||||||||||||||||| Sbjct: 35487 ctctccgacgacgacgacgac 35507
>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1175_B01 Length = 96191 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 395 gacgacgacgacctgccgatgacga 419 |||||||||||||||| |||||||| Sbjct: 44124 gacgacgacgacctgcagatgacga 44148
>emb|AJ325271.1|HSA325271 Homo sapiens genomic sequence surrounding NotI site, clone NR3-176R Length = 803 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 430 ccgtgccggcccggtcgccgccgcc 454 |||||||||| |||||||||||||| Sbjct: 5 ccgtgccggcgcggtcgccgccgcc 29
>dbj|AK100947.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138H21, full insert sequence Length = 1963 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 378 cgccgccgctctccgacgacgacgacgac 406 ||||||||| ||||||| ||||||||||| Sbjct: 578 cgccgccgcgctccgaccacgacgacgac 550
>gb|AY110253.1| Zea mays CL871_1 mRNA sequence Length = 1396 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 333 ccgacctcaccagcgacgagttcacggccatgtacac 369 ||||||| |||||| | |||||| ||||||||||||| Sbjct: 405 ccgacctgaccagcaaagagttcgcggccatgtacac 441
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 ccgaggacgccgacccgatggcgca 171 |||||||||||| |||||||||||| Sbjct: 1808224 ccgaggacgccggcccgatggcgca 1808200
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 cgccgccgccggcggtggagg 465 ||||||||||||||||||||| Sbjct: 4001707 cgccgccgccggcggtggagg 4001687
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 379 gccgccgctctccgacgacgacgacgacc 407 ||||||||||| ||||| ||||||||||| Sbjct: 3968747 gccgccgctctgcgacgccgacgacgacc 3968775 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 1320504 tctccgacgacgacgacgac 1320485 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 1091619 tctccgacgacgacgacgac 1091600
>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132682 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 379 gccgccgctctccgacgacgacgacgacc 407 ||||||||||| ||||| ||||||||||| Sbjct: 5183 gccgccgctctgcgacgccgacgacgacc 5211
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 379 gccgccgctctccgacgacgacgacgacc 407 ||||||||||| ||||| ||||||||||| Sbjct: 130749 gccgccgctctgcgacgccgacgacgacc 130777
>ref|NM_202514.1| Arabidopsis thaliana unknown protein AT3G06790 transcript variant AT3G06790.2 mRNA, complete cds Length = 1844 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 tccgacgacgacgacgacct 408 |||||||||||||||||||| Sbjct: 1712 tccgacgacgacgacgacct 1731
>ref|NM_111559.2| Arabidopsis thaliana unknown protein AT3G06790 transcript variant AT3G06790.1 mRNA, complete cds Length = 1844 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 tccgacgacgacgacgacct 408 |||||||||||||||||||| Sbjct: 1712 tccgacgacgacgacgacct 1731
>ref|NM_111558.2| Arabidopsis thaliana unknown protein AT3G06780 mRNA, complete cds Length = 1034 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tccgacgacgacgacgacct 408 |||||||||||||||||||| Sbjct: 133 tccgacgacgacgacgacct 114
>ref|NM_185588.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1170 Score = 40.1 bits (20), Expect = 7.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 378 cgccgccgctctccgacgacgacgacga 405 ||||||||| |||||||||||||||||| Sbjct: 740 cgccgccgc-ctccgacgacgacgacga 766
>ref|XM_483097.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1602 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 gccgctctccgacgacgacgacga 405 ||||| |||||||||||||||||| Sbjct: 105 gccgccctccgacgacgacgacga 82
>ref|XM_475499.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 561 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ctccgacgacgacgacgacc 407 |||||||||||||||||||| Sbjct: 357 ctccgacgacgacgacgacc 338
>ref|XM_465879.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2280 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 439 cccggtcgccgccgccggcggtggaggc 466 ||||||||||||||||| ||| |||||| Sbjct: 111 cccggtcgccgccgccgccggcggaggc 138
>ref|XM_450778.1| Oryza sativa (japonica cultivar-group), mRNA Length = 381 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 226 tctccgacgacgacgacgac 207
>ref|NM_183944.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 816 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 cggcccggtcgccgccgccg 455 |||||||||||||||||||| Sbjct: 586 cggcccggtcgccgccgccg 567
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 gacgacgacgacctgccgat 414 |||||||||||||||||||| Sbjct: 3369513 gacgacgacgacctgccgat 3369494
>ref|XM_463416.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3825 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cgaggccaccaacggcgacg 290 |||||||||||||||||||| Sbjct: 249 cgaggccaccaacggcgacg 268
>ref|NM_187749.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 234 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 gtcgccgccgccggcggtgg 462 |||||||||||||||||||| Sbjct: 85 gtcgccgccgccggcggtgg 104
>ref|XM_507395.1| PREDICTED Oryza sativa (japonica cultivar-group), P0524E08.111 mRNA Length = 877 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ctctccgacgacgacgacga 405 |||||||||||||||||||| Sbjct: 41 ctctccgacgacgacgacga 60
>ref|XM_506483.2| PREDICTED Oryza sativa (japonica cultivar-group), P0524E08.111 mRNA Length = 1077 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ctctccgacgacgacgacga 405 |||||||||||||||||||| Sbjct: 69 ctctccgacgacgacgacga 88
>ref|XM_478912.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2237 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 cgacgacgacgacgacctgc 410 |||||||||||||||||||| Sbjct: 1733 cgacgacgacgacgacctgc 1714
>ref|XM_473527.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2592 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ctctccgacgacgacgacga 405 |||||||||||||||||||| Sbjct: 193 ctctccgacgacgacgacga 212
>ref|XM_472562.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 672 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 443 tctccgacgacgacgacgac 462
>gb|AY022636.1| Oryza sativa microsatellite MRG4961 containing (CAG)X8, closest to marker R3341, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 cgacgacgacgacgacctgc 410 |||||||||||||||||||| Sbjct: 192 cgacgacgacgacgacctgc 173
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 261 tgcgctacatcgaggccaccaacggcga 288 ||||| |||||||||||| ||||||||| Sbjct: 2114127 tgcgcgacatcgaggccaacaacggcga 2114100
>gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055D24 map C535, complete sequence Length = 174759 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cgacgacgacgacgacctgc 410 |||||||||||||||||||| Sbjct: 31756 cgacgacgacgacgacctgc 31775
>gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019A16, complete sequence Length = 175425 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cgacgacgacgacgacctgc 410 |||||||||||||||||||| Sbjct: 91245 cgacgacgacgacgacctgc 91264
>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10, complete sequence Length = 157609 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ctccgacgacgacgacgacc 407 |||||||||||||||||||| Sbjct: 14457 ctccgacgacgacgacgacc 14438
>ref|XM_868545.1| PREDICTED: Bos taurus similar to ankyrin repeat domain 13 family, member D (LOC616514), mRNA Length = 1920 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cgacgacgacgacgacctgc 410 |||||||||||||||||||| Sbjct: 1533 cgacgacgacgacgacctgc 1552
>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02, complete sequence Length = 99795 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ctccgacgacgacgacgacc 407 |||||||||||||||||||| Sbjct: 34780 ctccgacgacgacgacgacc 34799
>ref|XM_608794.2| PREDICTED: Bos taurus similar to signal peptide peptidase-like 2A (LOC530325), mRNA Length = 2881 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gtcccgcccggccaccgagg 152 |||||||||||||||||||| Sbjct: 928 gtcccgcccggccaccgagg 947
>gb|AY676932.1| Oryza sativa (indica cultivar-group) transcription factor WRKY35 (WRKY35) mRNA, complete cds Length = 1176 Score = 40.1 bits (20), Expect = 7.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 378 cgccgccgctctccgacgacgacgacga 405 ||||||||| |||||||||||||||||| Sbjct: 746 cgccgccgc-ctccgacgacgacgacga 772
>ref|XM_370429.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06926.4) partial mRNA Length = 1056 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 247 ctacgcgcgcaacatgcgctacatcgag 274 ||||| |||||| ||||||||||||||| Sbjct: 120 ctacgagcgcaagatgcgctacatcgag 147
>ref|XM_953737.1| Neurospora crassa OR74A hypothetical protein (NCU08892.1) partial mRNA Length = 1233 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 221 tctccgacgacgacgacgac 240
>ref|XM_959174.1| Neurospora crassa OR74A hypothetical protein (NCU02772.1) partial mRNA Length = 1431 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 985 tctccgacgacgacgacgac 966
>ref|XM_329959.1| Neurospora crassa OR74A hypothetical protein (NCU02772.1) partial mRNA Length = 1431 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 985 tctccgacgacgacgacgac 966
>ref|XM_331283.1| Neurospora crassa OR74A hypothetical protein (NCU08892.1) partial mRNA Length = 1233 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 221 tctccgacgacgacgacgac 240
>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04, complete sequence Length = 122599 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ctccgacgacgacgacgacc 407 |||||||||||||||||||| Sbjct: 117897 ctccgacgacgacgacgacc 117916
>gb|AC104278.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1345_B12, complete sequence Length = 119909 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gccgctctccgacgacgacg 401 |||||||||||||||||||| Sbjct: 47590 gccgctctccgacgacgacg 47609
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 89990 tctccgacgacgacgacgac 89971
>gb|DQ003488.1| Rhodobacter sphaeroides PHB synthase gene, complete cds Length = 1806 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 261 tgcgctacatcgaggccaccaacggcga 288 ||||| |||||||||||| ||||||||| Sbjct: 596 tgcgcgacatcgaggccaacaacggcga 623
>ref|XM_847066.1| PREDICTED: Canis familiaris similar to GC-rich sequence DNA-binding factor homolog (LOC609740), mRNA Length = 4242 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 ggcccggtcgccgccgccgg 456 |||||||||||||||||||| Sbjct: 585 ggcccggtcgccgccgccgg 566
>gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence Length = 174910 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 150287 tctccgacgacgacgacgac 150306
>gb|AC023912.5|ATAC023912 Arabidopsis thaliana chromosome III BAC F3E22 genomic sequence, complete sequence Length = 63767 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 tccgacgacgacgacgacct 408 |||||||||||||||||||| Sbjct: 22818 tccgacgacgacgacgacct 22837
>emb|X63990.1|OS19KDGLO O.sativa mRNA for 19 kDa globulin Length = 757 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ctccgacgacgacgacgacc 407 |||||||||||||||||||| Sbjct: 385 ctccgacgacgacgacgacc 366
>gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017B18, complete sequence Length = 150279 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 57350 tctccgacgacgacgacgac 57331
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 acgagctcggcgagaccgcc 328 |||||||||||||||||||| Sbjct: 1003087 acgagctcggcgagaccgcc 1003068
>emb|BX294091.1|NCB14A21 Neurospora crassa DNA linkage group V BAC contig B14A21 Length = 113206 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 77934 tctccgacgacgacgacgac 77915
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 gcgacgccggcgccgggctc 304 |||||||||||||||||||| Sbjct: 241371 gcgacgccggcgccgggctc 241390
>emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088K19, complete sequence Length = 156002 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 56405 tctccgacgacgacgacgac 56424
>emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0005N02, complete sequence Length = 175163 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ctctccgacgacgacgacga 405 |||||||||||||||||||| Sbjct: 1808 ctctccgacgacgacgacga 1827
>emb|AJ222778.1|HVJ222778 Hordeum vulgare mRNA for putative thiol protease, clone RG42 Length = 350 Score = 40.1 bits (20), Expect = 7.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 314 ctcggcgagaccgcctacaccgacctcaccagcgacgagttcacggccatgt 365 |||||||| ||| | | ||||||||||||| ||| ||||||| |||||||| Sbjct: 292 ctcggcgaaaccccgttcaccgacctcacccacgaagagttcatggccatgt 343
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cggcgacgccggcgccgggc 302 |||||||||||||||||||| Sbjct: 1012471 cggcgacgccggcgccgggc 1012490
>tpg|BK000819.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M230, complete sequence Length = 1332 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 cggcccggtcgccgccgccg 455 |||||||||||||||||||| Sbjct: 799 cggcccggtcgccgccgccg 818
>gb|AE012309.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 217 of 460 of the complete genome Length = 11551 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gatcaccacccgtgccggcc 440 |||||||||||||||||||| Sbjct: 7401 gatcaccacccgtgccggcc 7420
>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12, complete sequence Length = 103330 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 gtcgccgccgccggcggtgg 462 |||||||||||||||||||| Sbjct: 69842 gtcgccgccgccggcggtgg 69861
>gb|AY052286.1| Arabidopsis thaliana AT3g06780/F3E22_8 mRNA, complete cds Length = 962 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tccgacgacgacgacgacct 408 |||||||||||||||||||| Sbjct: 133 tccgacgacgacgacgacct 114
>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0071M09, complete sequence Length = 143595 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 63372 tctccgacgacgacgacgac 63391
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 gatcaccacccgtgccggcc 440 |||||||||||||||||||| Sbjct: 2574553 gatcaccacccgtgccggcc 2574534
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 cggcccggtcgccgccgccg 455 |||||||||||||||||||| Sbjct: 655612 cggcccggtcgccgccgccg 655631
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 ggccggggcgccggcgagcg 512 |||||||||||||||||||| Sbjct: 93810 ggccggggcgccggcgagcg 93829
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 ccgaggacgccgacccgatggcgc 170 |||||||||||||| ||||||||| Sbjct: 2438965 ccgaggacgccgacgcgatggcgc 2438942 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 acctgccgatgacgatgatc 424 |||||||||||||||||||| Sbjct: 264677 acctgccgatgacgatgatc 264696
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 gccgctctccgacgacgacgacga 405 ||||| |||||||||||||||||| Sbjct: 24273323 gccgccctccgacgacgacgacga 24273346
>emb|BX825397.1|CNS0A568 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL34ZE12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 841 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tccgacgacgacgacgacct 408 |||||||||||||||||||| Sbjct: 62 tccgacgacgacgacgacct 43
>emb|BX825881.1|CNS0A4OJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL6ZB09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 842 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tccgacgacgacgacgacct 408 |||||||||||||||||||| Sbjct: 96 tccgacgacgacgacgacct 77
>dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045F02 Length = 215378 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 cggcccggtcgccgccgccg 455 |||||||||||||||||||| Sbjct: 8879 cggcccggtcgccgccgccg 8898
>dbj|AP003337.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1111_G12 Length = 112664 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 cggcccggtcgccgccgccg 455 |||||||||||||||||||| Sbjct: 99472 cggcccggtcgccgccgccg 99491
>gb|AF098459.2| Rhodobacter sphaeroides poly-3-hydroxybutyric acid synthase (phbC) gene, complete cds Length = 2829 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 261 tgcgctacatcgaggccaccaacggcga 288 ||||| |||||||||||| ||||||||| Sbjct: 937 tgcgcgacatcgaggccaacaacggcga 964
>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004D12 Length = 138136 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 13664 tctccgacgacgacgacgac 13683
>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_H09 Length = 110086 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cgaggccaccaacggcgacg 290 |||||||||||||||||||| Sbjct: 37326 cgaggccaccaacggcgacg 37345
>dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0470A12 Length = 185095 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 183855 tctccgacgacgacgacgac 183874
>dbj|AP005782.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0079G12 Length = 139796 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 99707 tctccgacgacgacgacgac 99726
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cgacgacgacgacgacctgc 410 |||||||||||||||||||| Sbjct: 3380660 cgacgacgacgacgacctgc 3380679
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 40.1 bits (20), Expect = 7.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 378 cgccgccgctctccgacgacgacgacga 405 ||||||||| |||||||||||||||||| Sbjct: 121714 cgccgccgc-ctccgacgacgacgacga 121740
>dbj|AP005828.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0702F05 Length = 145018 Score = 40.1 bits (20), Expect = 7.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 378 cgccgccgctctccgacgacgacgacga 405 ||||||||| |||||||||||||||||| Sbjct: 49517 cgccgccgc-ctccgacgacgacgacga 49543
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0655A07 Length = 172473 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 gtcgccgccgccggcggtgg 462 |||||||||||||||||||| Sbjct: 77297 gtcgccgccgccggcggtgg 77278
>dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0057D11 Length = 190790 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 8293 tctccgacgacgacgacgac 8312
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 gccgctctccgacgacgacgacga 405 ||||| |||||||||||||||||| Sbjct: 139662 gccgccctccgacgacgacgacga 139685
>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1127_E01 Length = 123787 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 cgacgacgacgacgacctgc 410 |||||||||||||||||||| Sbjct: 86614 cgacgacgacgacgacctgc 86595
>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0041C07 Length = 179047 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 170774 tctccgacgacgacgacgac 170755
>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0027G10 Length = 184759 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 12613 tctccgacgacgacgacgac 12594
>dbj|AP005285.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F04 Length = 139563 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 439 cccggtcgccgccgccggcggtggaggc 466 ||||||||||||||||| ||| |||||| Sbjct: 136800 cccggtcgccgccgccgccggcggaggc 136827
>dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686H11 Length = 135273 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 gccgctctccgacgacgacgacga 405 ||||| |||||||||||||||||| Sbjct: 13627 gccgccctccgacgacgacgacga 13650
>dbj|AK120466.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108M03, full insert sequence Length = 5557 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 439 cccggtcgccgccgccggcggtggaggc 466 ||||||||||||||||| ||| |||||| Sbjct: 110 cccggtcgccgccgccgccggcggaggc 137
>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524E08 Length = 154696 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ctctccgacgacgacgacga 405 |||||||||||||||||||| Sbjct: 54040 ctctccgacgacgacgacga 54059
>dbj|AK111341.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F08, full insert sequence Length = 559 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cgaggccaccaacggcgacg 290 |||||||||||||||||||| Sbjct: 335 cgaggccaccaacggcgacg 354
>dbj|AK109874.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-B09, full insert sequence Length = 1428 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ctccgacgacgacgacgacc 407 |||||||||||||||||||| Sbjct: 162 ctccgacgacgacgacgacc 181
>dbj|AK106995.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-B09, full insert sequence Length = 2251 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 1816 tctccgacgacgacgacgac 1797
>dbj|AK105463.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-126-A01, full insert sequence Length = 822 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 77 tctccgacgacgacgacgac 96
>dbj|AK103489.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130M24, full insert sequence Length = 811 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 66 tctccgacgacgacgacgac 85
>dbj|AK102812.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108L10, full insert sequence Length = 2279 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 439 cccggtcgccgccgccggcggtggaggc 466 ||||||||||||||||| ||| |||||| Sbjct: 110 cccggtcgccgccgccgccggcggaggc 137
>dbj|AK102803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108G13, full insert sequence Length = 2237 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 cgacgacgacgacgacctgc 410 |||||||||||||||||||| Sbjct: 1733 cgacgacgacgacgacctgc 1714
>dbj|AK101576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050K07, full insert sequence Length = 1690 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 80 tctccgacgacgacgacgac 99
>dbj|AK069142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008N22, full insert sequence Length = 1077 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ctctccgacgacgacgacga 405 |||||||||||||||||||| Sbjct: 69 ctctccgacgacgacgacga 88
>dbj|AK063462.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-H03, full insert sequence Length = 1606 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 cgacgacgacgacgacctgc 410 |||||||||||||||||||| Sbjct: 208 cgacgacgacgacgacctgc 227
>dbj|AK058506.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G01, full insert sequence Length = 877 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ctctccgacgacgacgacga 405 |||||||||||||||||||| Sbjct: 41 ctctccgacgacgacgacga 60
>gb|AY109230.1| Zea mays PCO070603 mRNA sequence Length = 1134 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 109 tctccgacgacgacgacgac 90
>emb|AJ535064.1|OSA535064 Oryza sativa (japonica cultivar-group) mdr8 gene for MDR-like ABC transporter, exons 1-12 Length = 6655 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 cgaggccaccaacggcgacg 290 |||||||||||||||||||| Sbjct: 249 cgaggccaccaacggcgacg 268
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 cggccggggcgccggcgagc 511 |||||||||||||||||||| Sbjct: 1537619 cggccggggcgccggcgagc 1537600
>emb|AJ580965.1|SHE580965 Suid herpesvirus 1 strain Kaplan UL5 gene, UL4 gene, UL6 gene (partial), UL3.5 gene, UL3 gene and UL2 gene (partial) Length = 5200 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 ggccggggcgccggcgagcg 512 |||||||||||||||||||| Sbjct: 4891 ggccggggcgccggcgagcg 4910
>emb|BX000506.4|CNS08CDW Oryza sativa chromosome 12, . BAC OJ1311_G04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 97056 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 86891 tctccgacgacgacgacgac 86872
>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10, complete sequence Length = 150957 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ctctccgacgacgacgacga 405 |||||||||||||||||||| Sbjct: 145441 ctctccgacgacgacgacga 145460
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157453 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 108665 tctccgacgacgacgacgac 108684
>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 126974 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tctccgacgacgacgacgac 406 |||||||||||||||||||| Sbjct: 30602 tctccgacgacgacgacgac 30583
>gb|AC139317.4| Mus musculus BAC clone RP24-495N6 from 15, complete sequence Length = 182415 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 cgacgacgacgacgacctgc 410 |||||||||||||||||||| Sbjct: 73330 cgacgacgacgacgacctgc 73311
>gb|L12252.1|RICMSF Oryza sativa DNA fragment with a miscellaneous signal and an open reading frame Length = 825 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ctccgacgacgacgacgacc 407 |||||||||||||||||||| Sbjct: 345 ctccgacgacgacgacgacc 326
>gb|L17049.1|RCAPHOAS Rhodobacter spaeroides polyhydroxyalkanoate synthase (phaC) gene, complete cds Length = 3325 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 261 tgcgctacatcgaggccaccaacggcga 288 ||||| |||||||||||| ||||||||| Sbjct: 1618 tgcgcgacatcgaggccaacaacggcga 1645
>emb|AL606969.26| Mouse DNA sequence from clone RP23-331P21 on chromosome 4, complete sequence Length = 224344 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ctccgacgacgacgacgacc 407 |||||||||||||||||||| Sbjct: 121248 ctccgacgacgacgacgacc 121267
>gb|AY012643.1|AH010372S2 Uncinia flaccida internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 607 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 cggccggggcgccggcgagc 511 |||||||||||||||||||| Sbjct: 160 cggccggggcgccggcgagc 179
>gb|AY012640.1|AH010371S2 Uncinia rupestris internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 607 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 cggccggggcgccggcgagc 511 |||||||||||||||||||| Sbjct: 160 cggccggggcgccggcgagc 179
>gb|AY012637.1|AH010370S2 Uncinia banksii internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 607 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 cggccggggcgccggcgagc 511 |||||||||||||||||||| Sbjct: 160 cggccggggcgccggcgagc 179
>gb|AY012634.1|AH010369S2 Uncinia banksii internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 607 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 cggccggggcgccggcgagc 511 |||||||||||||||||||| Sbjct: 160 cggccggggcgccggcgagc 179
>gb|U02513.1|SHU02513 Suid herpesvirus 1 Kaplan glycoprotein L (UL1) and uracil-DNA glycosylase (UL2) genes, complete cds, and (UL3) gene, partial cds Length = 2791 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 ggccggggcgccggcgagcg 512 |||||||||||||||||||| Sbjct: 2725 ggccggggcgccggcgagcg 2706
>gb|U02512.1|SHU02512 Suid herpesvirus 1 Becker glycoprotein L (UL1) and uracil-DNA glycosylase (UL2) genes, complete cds, and (UL3) gene, partial cds Length = 2793 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 ggccggggcgccggcgagcg 512 |||||||||||||||||||| Sbjct: 2727 ggccggggcgccggcgagcg 2708
>dbj|D50643.1| Oryza sativa (japonica cultivar-group) DNA for 26 kDa globulin, complete cds Length = 1773 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ctccgacgacgacgacgacc 407 |||||||||||||||||||| Sbjct: 1365 ctccgacgacgacgacgacc 1346
>gb|L13855.1|SH1UDNAG Pseudorabies virus uracil-DNA glycosylase gene, complete cds Length = 4100 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 ggccggggcgccggcgagcg 512 |||||||||||||||||||| Sbjct: 2711 ggccggggcgccggcgagcg 2692 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,143,280 Number of Sequences: 3902068 Number of extensions: 3143280 Number of successful extensions: 121243 Number of sequences better than 10.0: 179 Number of HSP's better than 10.0 without gapping: 194 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 109723 Number of HSP's gapped (non-prelim): 11520 length of query: 516 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 493 effective length of database: 17,143,297,704 effective search space: 8451645768072 effective search space used: 8451645768072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
