ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart55e11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467248.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1305 Score = 642 bits (324), Expect = 0.0 Identities = 378/396 (95%) Strand = Plus / Plus Query: 152 gaaccagcggtggccgccgtggctgaagccgctgctggcgacgagcttcttcgtgcaatg 211 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 173 gaaccagcggtggccgccgtggctgaagccgctgctgtcgacgagcttcttcgtgcaatg 232 Query: 212 ccgggtgcacgccgacgcgcacaagagcgagtgcaacatgtactgcctcgactgcatcgg 271 | || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 caggatccacgccgacgcgcacaagagcgagtgcaacatgtactgcctcgactgcatgaa 292 Query: 272 cggcgcgctctgctcgctctgcctcgcccaccaccgcgaccaccacgccatccagatacg 331 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 293 cggcgcgctctgctccctctgcctctcccaccaccgcgaccaccacgccatccagatacg 352 Query: 332 gaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagagggtgctggacatcac 391 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 353 gaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagaaggtgctggacatcac 412 Query: 392 cggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgagcgcccgca 451 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 413 cggcgtgcagacgtacatcatcaacagcgcccgcgtggtgttcctcaacgagcgccccca 472 Query: 452 gccgaggccgggcaagggagtcaccaacacctgcgacgtctgcgagcgcagcctcctcga 511 ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 473 gccgaggcccggcaagggcgtcaccaacacctgcgaggtctgcgagcgcagcctcctcga 532 Query: 512 ctcgttccgcttctgctccctcggatgtaaaattgt 547 ||| ||||||||||||||||||||||| || ||||| Sbjct: 533 ctccttccgcttctgctccctcggatgcaagattgt 568
>ref|XM_506899.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1148_D05.19 mRNA Length = 1322 Score = 642 bits (324), Expect = 0.0 Identities = 378/396 (95%) Strand = Plus / Plus Query: 152 gaaccagcggtggccgccgtggctgaagccgctgctggcgacgagcttcttcgtgcaatg 211 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 178 gaaccagcggtggccgccgtggctgaagccgctgctgtcgacgagcttcttcgtgcaatg 237 Query: 212 ccgggtgcacgccgacgcgcacaagagcgagtgcaacatgtactgcctcgactgcatcgg 271 | || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 caggatccacgccgacgcgcacaagagcgagtgcaacatgtactgcctcgactgcatgaa 297 Query: 272 cggcgcgctctgctcgctctgcctcgcccaccaccgcgaccaccacgccatccagatacg 331 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 298 cggcgcgctctgctccctctgcctctcccaccaccgcgaccaccacgccatccagatacg 357 Query: 332 gaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagagggtgctggacatcac 391 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 358 gaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagaaggtgctggacatcac 417 Query: 392 cggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgagcgcccgca 451 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 418 cggcgtgcagacgtacatcatcaacagcgcccgcgtggtgttcctcaacgagcgccccca 477 Query: 452 gccgaggccgggcaagggagtcaccaacacctgcgacgtctgcgagcgcagcctcctcga 511 ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 478 gccgaggcccggcaagggcgtcaccaacacctgcgaggtctgcgagcgcagcctcctcga 537 Query: 512 ctcgttccgcttctgctccctcggatgtaaaattgt 547 ||| ||||||||||||||||||||||| || ||||| Sbjct: 538 ctccttccgcttctgctccctcggatgcaagattgt 573
>dbj|AK104818.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A01, full insert sequence Length = 1305 Score = 642 bits (324), Expect = 0.0 Identities = 378/396 (95%) Strand = Plus / Plus Query: 152 gaaccagcggtggccgccgtggctgaagccgctgctggcgacgagcttcttcgtgcaatg 211 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 173 gaaccagcggtggccgccgtggctgaagccgctgctgtcgacgagcttcttcgtgcaatg 232 Query: 212 ccgggtgcacgccgacgcgcacaagagcgagtgcaacatgtactgcctcgactgcatcgg 271 | || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 caggatccacgccgacgcgcacaagagcgagtgcaacatgtactgcctcgactgcatgaa 292 Query: 272 cggcgcgctctgctcgctctgcctcgcccaccaccgcgaccaccacgccatccagatacg 331 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 293 cggcgcgctctgctccctctgcctctcccaccaccgcgaccaccacgccatccagatacg 352 Query: 332 gaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagagggtgctggacatcac 391 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 353 gaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagaaggtgctggacatcac 412 Query: 392 cggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgagcgcccgca 451 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 413 cggcgtgcagacgtacatcatcaacagcgcccgcgtggtgttcctcaacgagcgccccca 472 Query: 452 gccgaggccgggcaagggagtcaccaacacctgcgacgtctgcgagcgcagcctcctcga 511 ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 473 gccgaggcccggcaagggcgtcaccaacacctgcgaggtctgcgagcgcagcctcctcga 532 Query: 512 ctcgttccgcttctgctccctcggatgtaaaattgt 547 ||| ||||||||||||||||||||||| || ||||| Sbjct: 533 ctccttccgcttctgctccctcggatgcaagattgt 568
>dbj|AK066953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092A21, full insert sequence Length = 1321 Score = 642 bits (324), Expect = 0.0 Identities = 378/396 (95%) Strand = Plus / Plus Query: 152 gaaccagcggtggccgccgtggctgaagccgctgctggcgacgagcttcttcgtgcaatg 211 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 177 gaaccagcggtggccgccgtggctgaagccgctgctgtcgacgagcttcttcgtgcaatg 236 Query: 212 ccgggtgcacgccgacgcgcacaagagcgagtgcaacatgtactgcctcgactgcatcgg 271 | || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 caggatccacgccgacgcgcacaagagcgagtgcaacatgtactgcctcgactgcatgaa 296 Query: 272 cggcgcgctctgctcgctctgcctcgcccaccaccgcgaccaccacgccatccagatacg 331 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 297 cggcgcgctctgctccctctgcctctcccaccaccgcgaccaccacgccatccagatacg 356 Query: 332 gaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagagggtgctggacatcac 391 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 357 gaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagaaggtgctggacatcac 416 Query: 392 cggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgagcgcccgca 451 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 417 cggcgtgcagacgtacatcatcaacagcgcccgcgtggtgttcctcaacgagcgccccca 476 Query: 452 gccgaggccgggcaagggagtcaccaacacctgcgacgtctgcgagcgcagcctcctcga 511 ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 477 gccgaggcccggcaagggcgtcaccaacacctgcgaggtctgcgagcgcagcctcctcga 536 Query: 512 ctcgttccgcttctgctccctcggatgtaaaattgt 547 ||| ||||||||||||||||||||||| || ||||| Sbjct: 537 ctccttccgcttctgctccctcggatgcaagattgt 572
>ref|XM_473723.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 720 Score = 553 bits (279), Expect = e-154 Identities = 380/413 (92%), Gaps = 3/413 (0%) Strand = Plus / Plus Query: 123 ggaggagcggagtgcgacgaggaggcggggaaccagcggtggccgccgtggctgaagccg 182 ||||||| ||||||||||| || ||| |||||||||||||||||| |||||||||||| Sbjct: 31 ggaggaggggagtgcgacgggg---cggagaaccagcggtggccgccatggctgaagccg 87 Query: 183 ctgctggcgacgagcttcttcgtgcaatgccgggtgcacgccgacgcgcacaagagcgag 242 |||||||||||||||||||||| |||||| | ||||||| ||| |||||||||||||| Sbjct: 88 ctgctggcgacgagcttcttcggccaatgcaagctgcacgcggactcgcacaagagcgag 147 Query: 243 tgcaacatgtactgcctcgactgcatcggcggcgcgctctgctcgctctgcctcgcccac 302 |||||||||||||||||||||||||| ||||||||||||||||| |||||| || || Sbjct: 148 tgcaacatgtactgcctcgactgcatgaacggcgcgctctgctcgcagtgcctctcctac 207 Query: 303 caccgcgaccaccacgccatccagatacggaggtcgtcgtaccacgacgtgatccgggtg 362 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 208 caccgcgaccaccacgccatccagatacggaggtcctcctaccacgacgtgatccgggtg 267 Query: 363 tcggagatacagagggtgctggacatcaccggcgtgcagacgtacatcatcaacagcgcg 422 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 tcggagatacagaaagtgctggacatcaccggcgtgcagacgtacatcatcaacagcgcg 327 Query: 423 cgcgtggtgttcctcaacgagcgcccgcagccgaggccgggcaagggagtcaccaacacc 482 ||||| |||||||||||||||||||| ||||||||||| |||||||| |||||||||||| Sbjct: 328 cgcgtcgtgttcctcaacgagcgcccccagccgaggcccggcaagggcgtcaccaacacc 387 Query: 483 tgcgacgtctgcgagcgcagcctcctcgactcgttccgcttctgctccctcgg 535 ||||| ||||||||||||||||| |||||| | |||||||||||||||||||| Sbjct: 388 tgcgaggtctgcgagcgcagcctgctcgacaccttccgcttctgctccctcgg 440
>dbj|AK069139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008F14, full insert sequence Length = 1474 Score = 553 bits (279), Expect = e-154 Identities = 380/413 (92%), Gaps = 3/413 (0%) Strand = Plus / Plus Query: 123 ggaggagcggagtgcgacgaggaggcggggaaccagcggtggccgccgtggctgaagccg 182 ||||||| ||||||||||| || ||| |||||||||||||||||| |||||||||||| Sbjct: 295 ggaggaggggagtgcgacgggg---cggagaaccagcggtggccgccatggctgaagccg 351 Query: 183 ctgctggcgacgagcttcttcgtgcaatgccgggtgcacgccgacgcgcacaagagcgag 242 |||||||||||||||||||||| |||||| | ||||||| ||| |||||||||||||| Sbjct: 352 ctgctggcgacgagcttcttcggccaatgcaagctgcacgcggactcgcacaagagcgag 411 Query: 243 tgcaacatgtactgcctcgactgcatcggcggcgcgctctgctcgctctgcctcgcccac 302 |||||||||||||||||||||||||| ||||||||||||||||| |||||| || || Sbjct: 412 tgcaacatgtactgcctcgactgcatgaacggcgcgctctgctcgcagtgcctctcctac 471 Query: 303 caccgcgaccaccacgccatccagatacggaggtcgtcgtaccacgacgtgatccgggtg 362 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 472 caccgcgaccaccacgccatccagatacggaggtcctcctaccacgacgtgatccgggtg 531 Query: 363 tcggagatacagagggtgctggacatcaccggcgtgcagacgtacatcatcaacagcgcg 422 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 532 tcggagatacagaaagtgctggacatcaccggcgtgcagacgtacatcatcaacagcgcg 591 Query: 423 cgcgtggtgttcctcaacgagcgcccgcagccgaggccgggcaagggagtcaccaacacc 482 ||||| |||||||||||||||||||| ||||||||||| |||||||| |||||||||||| Sbjct: 592 cgcgtcgtgttcctcaacgagcgcccccagccgaggcccggcaagggcgtcaccaacacc 651 Query: 483 tgcgacgtctgcgagcgcagcctcctcgactcgttccgcttctgctccctcgg 535 ||||| ||||||||||||||||| |||||| | |||||||||||||||||||| Sbjct: 652 tgcgaggtctgcgagcgcagcctgctcgacaccttccgcttctgctccctcgg 704
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 371 bits (187), Expect = 2e-99 Identities = 208/215 (96%) Strand = Plus / Minus Query: 324 cagatacggaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagagggtgctg 383 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 28454634 cagatacggaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagaaggtgctg 28454575 Query: 384 gacatcaccggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgag 443 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 28454574 gacatcaccggcgtgcagacgtacatcatcaacagcgcccgcgtggtgttcctcaacgag 28454515 Query: 444 cgcccgcagccgaggccgggcaagggagtcaccaacacctgcgacgtctgcgagcgcagc 503 ||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 28454514 cgcccccagccgaggcccggcaagggcgtcaccaacacctgcgaggtctgcgagcgcagc 28454455 Query: 504 ctcctcgactcgttccgcttctgctccctcggatg 538 ||||||||||| ||||||||||||||||||||||| Sbjct: 28454454 ctcctcgactccttccgcttctgctccctcggatg 28454420 Score = 276 bits (139), Expect = 7e-71 Identities = 166/175 (94%) Strand = Plus / Minus Query: 152 gaaccagcggtggccgccgtggctgaagccgctgctggcgacgagcttcttcgtgcaatg 211 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 28454903 gaaccagcggtggccgccgtggctgaagccgctgctgtcgacgagcttcttcgtgcaatg 28454844 Query: 212 ccgggtgcacgccgacgcgcacaagagcgagtgcaacatgtactgcctcgactgcatcgg 271 | || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28454843 caggatccacgccgacgcgcacaagagcgagtgcaacatgtactgcctcgactgcatgaa 28454784 Query: 272 cggcgcgctctgctcgctctgcctcgcccaccaccgcgaccaccacgccatccag 326 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 28454783 cggcgcgctctgctccctctgcctctcccaccaccgcgaccaccacgccatccag 28454729 Score = 46.1 bits (23), Expect = 0.12 Identities = 98/123 (79%) Strand = Plus / Minus Query: 330 cggaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagagggtgctggacatc 389 |||||||||||||||||| ||||| | || ||||||||| | || | ||||||| | Sbjct: 5204339 cggaggtcgtcgtaccacaacgtggtgcgcgtgtcggagctggagcgcacgctggacctg 5204280 Query: 390 accggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgagcgcccg 449 || | |||||||| ||| |||||||| ||| | || || |||||||||||||||||| Sbjct: 5204279 acgcgggtgcagacctacgtcatcaaccgcgacagggtcgtcttcctcaacgagcgcccg 5204220 Query: 450 cag 452 ||| Sbjct: 5204219 cag 5204217 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 ttccgcttctgctccctcgg 535 |||||||||||||||||||| Sbjct: 5204129 ttccgcttctgctccctcgg 5204110
>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1148_D05 Length = 155146 Score = 371 bits (187), Expect = 2e-99 Identities = 208/215 (96%) Strand = Plus / Minus Query: 324 cagatacggaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagagggtgctg 383 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 78755 cagatacggaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagaaggtgctg 78696 Query: 384 gacatcaccggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgag 443 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 78695 gacatcaccggcgtgcagacgtacatcatcaacagcgcccgcgtggtgttcctcaacgag 78636 Query: 444 cgcccgcagccgaggccgggcaagggagtcaccaacacctgcgacgtctgcgagcgcagc 503 ||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 78635 cgcccccagccgaggcccggcaagggcgtcaccaacacctgcgaggtctgcgagcgcagc 78576 Query: 504 ctcctcgactcgttccgcttctgctccctcggatg 538 ||||||||||| ||||||||||||||||||||||| Sbjct: 78575 ctcctcgactccttccgcttctgctccctcggatg 78541 Score = 276 bits (139), Expect = 7e-71 Identities = 166/175 (94%) Strand = Plus / Minus Query: 152 gaaccagcggtggccgccgtggctgaagccgctgctggcgacgagcttcttcgtgcaatg 211 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 79024 gaaccagcggtggccgccgtggctgaagccgctgctgtcgacgagcttcttcgtgcaatg 78965 Query: 212 ccgggtgcacgccgacgcgcacaagagcgagtgcaacatgtactgcctcgactgcatcgg 271 | || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78964 caggatccacgccgacgcgcacaagagcgagtgcaacatgtactgcctcgactgcatgaa 78905 Query: 272 cggcgcgctctgctcgctctgcctcgcccaccaccgcgaccaccacgccatccag 326 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 78904 cggcgcgctctgctccctctgcctctcccaccaccgcgaccaccacgccatccag 78850
>dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017H11 Length = 158374 Score = 371 bits (187), Expect = 2e-99 Identities = 208/215 (96%) Strand = Plus / Minus Query: 324 cagatacggaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagagggtgctg 383 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 23475 cagatacggaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagaaggtgctg 23416 Query: 384 gacatcaccggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgag 443 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 23415 gacatcaccggcgtgcagacgtacatcatcaacagcgcccgcgtggtgttcctcaacgag 23356 Query: 444 cgcccgcagccgaggccgggcaagggagtcaccaacacctgcgacgtctgcgagcgcagc 503 ||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 23355 cgcccccagccgaggcccggcaagggcgtcaccaacacctgcgaggtctgcgagcgcagc 23296 Query: 504 ctcctcgactcgttccgcttctgctccctcggatg 538 ||||||||||| ||||||||||||||||||||||| Sbjct: 23295 ctcctcgactccttccgcttctgctccctcggatg 23261 Score = 276 bits (139), Expect = 7e-71 Identities = 166/175 (94%) Strand = Plus / Minus Query: 152 gaaccagcggtggccgccgtggctgaagccgctgctggcgacgagcttcttcgtgcaatg 211 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 23744 gaaccagcggtggccgccgtggctgaagccgctgctgtcgacgagcttcttcgtgcaatg 23685 Query: 212 ccgggtgcacgccgacgcgcacaagagcgagtgcaacatgtactgcctcgactgcatcgg 271 | || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23684 caggatccacgccgacgcgcacaagagcgagtgcaacatgtactgcctcgactgcatgaa 23625 Query: 272 cggcgcgctctgctcgctctgcctcgcccaccaccgcgaccaccacgccatccag 326 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 23624 cggcgcgctctgctccctctgcctctcccaccaccgcgaccaccacgccatccag 23570
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12, complete sequence Length = 179644 Score = 325 bits (164), Expect = 9e-86 Identities = 200/212 (94%) Strand = Plus / Minus Query: 324 cagatacggaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagagggtgctg 383 |||||||||||||| || |||||||||||||||||||||||||||||||||| |||||| Sbjct: 5832 cagatacggaggtcctcctaccacgacgtgatccgggtgtcggagatacagaaagtgctg 5773 Query: 384 gacatcaccggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgag 443 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 5772 gacatcaccggcgtgcagacgtacatcatcaacagcgcgcgcgtcgtgttcctcaacgag 5713 Query: 444 cgcccgcagccgaggccgggcaagggagtcaccaacacctgcgacgtctgcgagcgcagc 503 ||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 5712 cgcccccagccgaggcccggcaagggcgtcaccaacacctgcgaggtctgcgagcgcagc 5653 Query: 504 ctcctcgactcgttccgcttctgctccctcgg 535 || |||||| | |||||||||||||||||||| Sbjct: 5652 ctgctcgacaccttccgcttctgctccctcgg 5621 Score = 234 bits (118), Expect = 2e-58 Identities = 183/204 (89%), Gaps = 3/204 (1%) Strand = Plus / Minus Query: 123 ggaggagcggagtgcgacgaggaggcggggaaccagcggtggccgccgtggctgaagccg 182 ||||||| ||||||||||| || ||| |||||||||||||||||| |||||||||||| Sbjct: 6395 ggaggaggggagtgcgacgggg---cggagaaccagcggtggccgccatggctgaagccg 6339 Query: 183 ctgctggcgacgagcttcttcgtgcaatgccgggtgcacgccgacgcgcacaagagcgag 242 |||||||||||||||||||||| |||||| | ||||||| ||| |||||||||||||| Sbjct: 6338 ctgctggcgacgagcttcttcggccaatgcaagctgcacgcggactcgcacaagagcgag 6279 Query: 243 tgcaacatgtactgcctcgactgcatcggcggcgcgctctgctcgctctgcctcgcccac 302 |||||||||||||||||||||||||| ||||||||||||||||| |||||| || || Sbjct: 6278 tgcaacatgtactgcctcgactgcatgaacggcgcgctctgctcgcagtgcctctcctac 6219 Query: 303 caccgcgaccaccacgccatccag 326 |||||||||||||||||||||||| Sbjct: 6218 caccgcgaccaccacgccatccag 6195
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 325 bits (164), Expect = 9e-86 Identities = 200/212 (94%) Strand = Plus / Minus Query: 324 cagatacggaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagagggtgctg 383 |||||||||||||| || |||||||||||||||||||||||||||||||||| |||||| Sbjct: 29869080 cagatacggaggtcctcctaccacgacgtgatccgggtgtcggagatacagaaagtgctg 29869021 Query: 384 gacatcaccggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgag 443 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 29869020 gacatcaccggcgtgcagacgtacatcatcaacagcgcgcgcgtcgtgttcctcaacgag 29868961 Query: 444 cgcccgcagccgaggccgggcaagggagtcaccaacacctgcgacgtctgcgagcgcagc 503 ||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 29868960 cgcccccagccgaggcccggcaagggcgtcaccaacacctgcgaggtctgcgagcgcagc 29868901 Query: 504 ctcctcgactcgttccgcttctgctccctcgg 535 || |||||| | |||||||||||||||||||| Sbjct: 29868900 ctgctcgacaccttccgcttctgctccctcgg 29868869 Score = 234 bits (118), Expect = 2e-58 Identities = 183/204 (89%), Gaps = 3/204 (1%) Strand = Plus / Minus Query: 123 ggaggagcggagtgcgacgaggaggcggggaaccagcggtggccgccgtggctgaagccg 182 ||||||| ||||||||||| || ||| |||||||||||||||||| |||||||||||| Sbjct: 29869643 ggaggaggggagtgcgacgggg---cggagaaccagcggtggccgccatggctgaagccg 29869587 Query: 183 ctgctggcgacgagcttcttcgtgcaatgccgggtgcacgccgacgcgcacaagagcgag 242 |||||||||||||||||||||| |||||| | ||||||| ||| |||||||||||||| Sbjct: 29869586 ctgctggcgacgagcttcttcggccaatgcaagctgcacgcggactcgcacaagagcgag 29869527 Query: 243 tgcaacatgtactgcctcgactgcatcggcggcgcgctctgctcgctctgcctcgcccac 302 |||||||||||||||||||||||||| ||||||||||||||||| |||||| || || Sbjct: 29869526 tgcaacatgtactgcctcgactgcatgaacggcgcgctctgctcgcagtgcctctcctac 29869467 Query: 303 caccgcgaccaccacgccatccag 326 |||||||||||||||||||||||| Sbjct: 29869466 caccgcgaccaccacgccatccag 29869443
>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence Length = 178552 Score = 325 bits (164), Expect = 9e-86 Identities = 200/212 (94%) Strand = Plus / Minus Query: 324 cagatacggaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagagggtgctg 383 |||||||||||||| || |||||||||||||||||||||||||||||||||| |||||| Sbjct: 150006 cagatacggaggtcctcctaccacgacgtgatccgggtgtcggagatacagaaagtgctg 149947 Query: 384 gacatcaccggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgag 443 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 149946 gacatcaccggcgtgcagacgtacatcatcaacagcgcgcgcgtcgtgttcctcaacgag 149887 Query: 444 cgcccgcagccgaggccgggcaagggagtcaccaacacctgcgacgtctgcgagcgcagc 503 ||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 149886 cgcccccagccgaggcccggcaagggcgtcaccaacacctgcgaggtctgcgagcgcagc 149827 Query: 504 ctcctcgactcgttccgcttctgctccctcgg 535 || |||||| | |||||||||||||||||||| Sbjct: 149826 ctgctcgacaccttccgcttctgctccctcgg 149795 Score = 234 bits (118), Expect = 2e-58 Identities = 183/204 (89%), Gaps = 3/204 (1%) Strand = Plus / Minus Query: 123 ggaggagcggagtgcgacgaggaggcggggaaccagcggtggccgccgtggctgaagccg 182 ||||||| ||||||||||| || ||| |||||||||||||||||| |||||||||||| Sbjct: 150569 ggaggaggggagtgcgacgggg---cggagaaccagcggtggccgccatggctgaagccg 150513 Query: 183 ctgctggcgacgagcttcttcgtgcaatgccgggtgcacgccgacgcgcacaagagcgag 242 |||||||||||||||||||||| |||||| | ||||||| ||| |||||||||||||| Sbjct: 150512 ctgctggcgacgagcttcttcggccaatgcaagctgcacgcggactcgcacaagagcgag 150453 Query: 243 tgcaacatgtactgcctcgactgcatcggcggcgcgctctgctcgctctgcctcgcccac 302 |||||||||||||||||||||||||| ||||||||||||||||| |||||| || || Sbjct: 150452 tgcaacatgtactgcctcgactgcatgaacggcgcgctctgctcgcagtgcctctcctac 150393 Query: 303 caccgcgaccaccacgccatccag 326 |||||||||||||||||||||||| Sbjct: 150392 caccgcgaccaccacgccatccag 150369
>dbj|AK064470.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-110-H04, full insert sequence Length = 685 Score = 323 bits (163), Expect = 3e-85 Identities = 217/235 (92%) Strand = Plus / Plus Query: 171 tggctgaagccgctgctggcgacgagcttcttcgtgcaatgccgggtgcacgccgacgcg 230 |||||||||||||||||||||||||||||||||| |||||| | ||||||| ||| || Sbjct: 10 tggctgaagccgctgctggcgacgagcttcttcggccaatgcaagctgcacgcggactcg 69 Query: 231 cacaagagcgagtgcaacatgtactgcctcgactgcatcggcggcgcgctctgctcgctc 290 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 70 cacaagagcgagtgcaacatgtactgcctcgactgcatgaacggcgcgctctgctcgcag 129 Query: 291 tgcctcgcccaccaccgcgaccaccacgccatccagatacggaggtcgtcgtaccacgac 350 |||||| || ||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 130 tgcctctcctaccaccgcgaccaccacgccatccagatacggaggtcctcctaccacgac 189 Query: 351 gtgatccgggtgtcggagatacagagggtgctggacatcaccggcgtgcagacgt 405 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 190 gtgatccgggtgtcggagatacagaaagtgctggacatcaccggcgtgcagacgt 244
>ref|NM_197866.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0003O19.3), mRNA Length = 1190 Score = 230 bits (116), Expect = 4e-57 Identities = 233/268 (86%), Gaps = 8/268 (2%) Strand = Plus / Plus Query: 275 cgcgctctgctcgctctgcctcgcccac---caccgcgaccaccacgccatccagatacg 331 |||||||||||| ||||||||||||||| ||||||||||||||| |||||||||| || Sbjct: 249 cgcgctctgctccctctgcctcgcccacaaccaccgcgaccaccacaccatccagatccg 308 Query: 332 gaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagagggtgctggacatcac 391 | ||||||||||||||||||||||| |||||||||| || |||||| | |||||||| Sbjct: 309 gcggtcgtcgtaccacgacgtgatcagggtgtcggacatccagaggttcatggacatcgg 368 Query: 392 cggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgagcgcccgca 451 ||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||| || Sbjct: 369 cggggtgcagacgtacgtcatcaacagcgcccgcgtggtgttcctcaacgagcgccccca 428 Query: 452 gc-cgaggccgggcaaggg---agtcaccaacacctgcgacgtctgcgagcgcagcctcc 507 || | ||||| |||||||| ||| |||||| |||||| |||||| |||||||||| Sbjct: 429 gcacaaggcc-ggcaagggcgccgtcgccaacatctgcgaggtctgcagccgcagcctcc 487 Query: 508 tcgactcgttccgcttctgctccctcgg 535 ||||| |||||||||||||||||||| Sbjct: 488 tcgacaacttccgcttctgctccctcgg 515 Score = 61.9 bits (31), Expect = 2e-06 Identities = 90/109 (82%), Gaps = 3/109 (2%) Strand = Plus / Plus Query: 161 gtggccgccgtggctgaagccgctgctggcgacgagcttcttcgtgcaatgccgggtgca 220 |||||||| |||||||| |||||||| || | ||||||||| ||| ||| |||||| Sbjct: 114 gtggccgcggtggctgagcccgctgctctcggccagcttcttctcgcagtgcaaggtgca 173 Query: 221 cgccgacgcgcacaagagcg---agtgcaacatgtactgcctcgactgc 266 ||||||| ||||| ||||| |||||||||||| ||||||||||||| Sbjct: 174 cgccgactcgcaccggagcggcgagtgcaacatgttctgcctcgactgc 222
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 170 bits (86), Expect = 3e-39 Identities = 186/216 (86%), Gaps = 5/216 (2%) Strand = Plus / Minus Query: 324 cagatacggaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagagggtgctg 383 ||||| ||| ||||||||||||||||||||||| |||||||||| || |||||| | || Sbjct: 22310364 cagatccggcggtcgtcgtaccacgacgtgatcagggtgtcggacatccagaggttcatg 22310305 Query: 384 gacatcaccggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgag 443 |||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 22310304 gacatcggcggggtgcagacgtacgtcatcaacagcgcccgcgtggtgttcctcaacgag 22310245 Query: 444 cgcccgcagc-cgaggccgggcaaggg---agtcaccaacacctgcgacgtctgcgagcg 499 ||||| |||| | ||||| |||||||| ||| |||||| |||||| |||||| || Sbjct: 22310244 cgcccccagcacaaggcc-ggcaagggcgccgtcgccaacatctgcgaggtctgcagccg 22310186 Query: 500 cagcctcctcgactcgttccgcttctgctccctcgg 535 ||||||||||||| |||||||||||||||||||| Sbjct: 22310185 cagcctcctcgacaacttccgcttctgctccctcgg 22310150 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/55 (90%), Gaps = 3/55 (5%) Strand = Plus / Minus Query: 275 cgcgctctgctcgctctgcctcgccc---accaccgcgaccaccacgccatccag 326 |||||||||||| ||||||||||||| ||||||||||||||||| |||||||| Sbjct: 22310509 cgcgctctgctccctctgcctcgcccacaaccaccgcgaccaccacaccatccag 22310455 Score = 61.9 bits (31), Expect = 2e-06 Identities = 90/109 (82%), Gaps = 3/109 (2%) Strand = Plus / Minus Query: 161 gtggccgccgtggctgaagccgctgctggcgacgagcttcttcgtgcaatgccgggtgca 220 |||||||| |||||||| |||||||| || | ||||||||| ||| ||| |||||| Sbjct: 22310644 gtggccgcggtggctgagcccgctgctctcggccagcttcttctcgcagtgcaaggtgca 22310585 Query: 221 cgccgacgcgcacaagagcg---agtgcaacatgtactgcctcgactgc 266 ||||||| ||||| ||||| |||||||||||| ||||||||||||| Sbjct: 22310584 cgccgactcgcaccggagcggcgagtgcaacatgttctgcctcgactgc 22310536
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete sequence Length = 172427 Score = 170 bits (86), Expect = 3e-39 Identities = 186/216 (86%), Gaps = 5/216 (2%) Strand = Plus / Minus Query: 324 cagatacggaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagagggtgctg 383 ||||| ||| ||||||||||||||||||||||| |||||||||| || |||||| | || Sbjct: 127607 cagatccggcggtcgtcgtaccacgacgtgatcagggtgtcggacatccagaggttcatg 127548 Query: 384 gacatcaccggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgag 443 |||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 127547 gacatcggcggggtgcagacgtacgtcatcaacagcgcccgcgtggtgttcctcaacgag 127488 Query: 444 cgcccgcagc-cgaggccgggcaaggg---agtcaccaacacctgcgacgtctgcgagcg 499 ||||| |||| | ||||| |||||||| ||| |||||| |||||| |||||| || Sbjct: 127487 cgcccccagcacaaggcc-ggcaagggcgccgtcgccaacatctgcgaggtctgcagccg 127429 Query: 500 cagcctcctcgactcgttccgcttctgctccctcgg 535 ||||||||||||| |||||||||||||||||||| Sbjct: 127428 cagcctcctcgacaacttccgcttctgctccctcgg 127393 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/55 (90%), Gaps = 3/55 (5%) Strand = Plus / Minus Query: 275 cgcgctctgctcgctctgcctcgccc---accaccgcgaccaccacgccatccag 326 |||||||||||| ||||||||||||| ||||||||||||||||| |||||||| Sbjct: 127752 cgcgctctgctccctctgcctcgcccacaaccaccgcgaccaccacaccatccag 127698 Score = 61.9 bits (31), Expect = 2e-06 Identities = 90/109 (82%), Gaps = 3/109 (2%) Strand = Plus / Minus Query: 161 gtggccgccgtggctgaagccgctgctggcgacgagcttcttcgtgcaatgccgggtgca 220 |||||||| |||||||| |||||||| || | ||||||||| ||| ||| |||||| Sbjct: 127887 gtggccgcggtggctgagcccgctgctctcggccagcttcttctcgcagtgcaaggtgca 127828 Query: 221 cgccgacgcgcacaagagcg---agtgcaacatgtactgcctcgactgc 266 ||||||| ||||| ||||| |||||||||||| ||||||||||||| Sbjct: 127827 cgccgactcgcaccggagcggcgagtgcaacatgttctgcctcgactgc 127779
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 170 bits (86), Expect = 3e-39 Identities = 186/216 (86%), Gaps = 5/216 (2%) Strand = Plus / Minus Query: 324 cagatacggaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagagggtgctg 383 ||||| ||| ||||||||||||||||||||||| |||||||||| || |||||| | || Sbjct: 22322432 cagatccggcggtcgtcgtaccacgacgtgatcagggtgtcggacatccagaggttcatg 22322373 Query: 384 gacatcaccggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgag 443 |||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 22322372 gacatcggcggggtgcagacgtacgtcatcaacagcgcccgcgtggtgttcctcaacgag 22322313 Query: 444 cgcccgcagc-cgaggccgggcaaggg---agtcaccaacacctgcgacgtctgcgagcg 499 ||||| |||| | ||||| |||||||| ||| |||||| |||||| |||||| || Sbjct: 22322312 cgcccccagcacaaggcc-ggcaagggcgccgtcgccaacatctgcgaggtctgcagccg 22322254 Query: 500 cagcctcctcgactcgttccgcttctgctccctcgg 535 ||||||||||||| |||||||||||||||||||| Sbjct: 22322253 cagcctcctcgacaacttccgcttctgctccctcgg 22322218 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/55 (90%), Gaps = 3/55 (5%) Strand = Plus / Minus Query: 275 cgcgctctgctcgctctgcctcgccc---accaccgcgaccaccacgccatccag 326 |||||||||||| ||||||||||||| ||||||||||||||||| |||||||| Sbjct: 22322577 cgcgctctgctccctctgcctcgcccacaaccaccgcgaccaccacaccatccag 22322523 Score = 61.9 bits (31), Expect = 2e-06 Identities = 90/109 (82%), Gaps = 3/109 (2%) Strand = Plus / Minus Query: 161 gtggccgccgtggctgaagccgctgctggcgacgagcttcttcgtgcaatgccgggtgca 220 |||||||| |||||||| |||||||| || | ||||||||| ||| ||| |||||| Sbjct: 22322712 gtggccgcggtggctgagcccgctgctctcggccagcttcttctcgcagtgcaaggtgca 22322653 Query: 221 cgccgacgcgcacaagagcg---agtgcaacatgtactgcctcgactgc 266 ||||||| ||||| ||||| |||||||||||| ||||||||||||| Sbjct: 22322652 cgccgactcgcaccggagcggcgagtgcaacatgttctgcctcgactgc 22322604
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 395 cgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgagcgcccgcagcc 454 ||||||||||||| | ||||||||||| | ||||||||||||| ||||||||| | Sbjct: 24775711 cgtgcagacgtacgtgatcaacagcgccaagatcgtgttcctcaacggccgcccgcaggc 24775770 Query: 455 gaggccgggcaagggagtcaccaacacctgcgacgtctgcgagcgcagcctcctcgactc 514 |||||| || ||||| ||||||||||||||||| ||||| |||||||||| |||||| Sbjct: 24775771 gaggcccgggaagggcgtcaccaacacctgcgagatctgctgccgcagcctccccgactc 24775830 Query: 515 gttccgcttctgctccctcgg 535 |||||||||||||||||||| Sbjct: 24775831 cttccgcttctgctccctcgg 24775851 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 324 cagatacggaggtcgtcgtaccacgacgtgatccgggtgtcggag 368 ||||| |||||||||||||||||| |||||||| ||||||||||| Sbjct: 24775640 cagattcggaggtcgtcgtaccacaacgtgatcagggtgtcggag 24775684 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 233 caagagcgagtgcaacatgtactgcctcgactgcatcggcggcgcgctctgctcgctctg 292 ||||| |||||||||| | | |||||||| ||||| ||||| ||| |||||| | ||| Sbjct: 24775450 caagaacgagtgcaacctcttctgcctcggctgcaccggcgacgccctctgcgcctactg 24775509 Query: 293 cctcgcccaccaccgcgaccaccacg 318 |||| || ||||||||||||||||| Sbjct: 24775510 cctccccgcccaccgcgaccaccacg 24775535 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 163 ggccgccgtggctgaagccgctgctggcgacgagcttctt 202 |||| ||||||||| |||||||||| ||||||||||||| Sbjct: 24775380 ggccaccgtggctgcggccgctgctgtcgacgagcttctt 24775419
>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0029G06 Length = 169711 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 395 cgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgagcgcccgcagcc 454 ||||||||||||| | ||||||||||| | ||||||||||||| ||||||||| | Sbjct: 109392 cgtgcagacgtacgtgatcaacagcgccaagatcgtgttcctcaacggccgcccgcaggc 109451 Query: 455 gaggccgggcaagggagtcaccaacacctgcgacgtctgcgagcgcagcctcctcgactc 514 |||||| || ||||| ||||||||||||||||| ||||| |||||||||| |||||| Sbjct: 109452 gaggcccgggaagggcgtcaccaacacctgcgagatctgctgccgcagcctccccgactc 109511 Query: 515 gttccgcttctgctccctcgg 535 |||||||||||||||||||| Sbjct: 109512 cttccgcttctgctccctcgg 109532 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 324 cagatacggaggtcgtcgtaccacgacgtgatccgggtgtcggag 368 ||||| |||||||||||||||||| |||||||| ||||||||||| Sbjct: 109321 cagattcggaggtcgtcgtaccacaacgtgatcagggtgtcggag 109365 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 233 caagagcgagtgcaacatgtactgcctcgactgcatcggcggcgcgctctgctcgctctg 292 ||||| |||||||||| | | |||||||| ||||| ||||| ||| |||||| | ||| Sbjct: 109131 caagaacgagtgcaacctcttctgcctcggctgcaccggcgacgccctctgcgcctactg 109190 Query: 293 cctcgcccaccaccgcgaccaccacg 318 |||| || ||||||||||||||||| Sbjct: 109191 cctccccgcccaccgcgaccaccacg 109216 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 163 ggccgccgtggctgaagccgctgctggcgacgagcttctt 202 |||| ||||||||| |||||||||| ||||||||||||| Sbjct: 109061 ggccaccgtggctgcggccgctgctgtcgacgagcttctt 109100
>dbj|AK067251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099A07, full insert sequence Length = 1274 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 395 cgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgagcgcccgcagcc 454 ||||||||||||| | ||||||||||| | ||||||||||||| ||||||||| | Sbjct: 433 cgtgcagacgtacgtgatcaacagcgccaagatcgtgttcctcaacggccgcccgcaggc 492 Query: 455 gaggccgggcaagggagtcaccaacacctgcgacgtctgcgagcgcagcctcctcgactc 514 |||||| || ||||| ||||||||||||||||| ||||| |||||||||| |||||| Sbjct: 493 gaggcccgggaagggcgtcaccaacacctgcgagatctgctgccgcagcctccccgactc 552 Query: 515 gttccgcttctgctccctcgg 535 |||||||||||||||||||| Sbjct: 553 cttccgcttctgctccctcgg 573 Score = 111 bits (56), Expect = 2e-21 Identities = 116/136 (85%) Strand = Plus / Plus Query: 233 caagagcgagtgcaacatgtactgcctcgactgcatcggcggcgcgctctgctcgctctg 292 ||||| |||||||||| | | |||||||| ||||| ||||| ||| |||||| | ||| Sbjct: 271 caagaacgagtgcaacctcttctgcctcggctgcaccggcgacgccctctgcgcctactg 330 Query: 293 cctcgcccaccaccgcgaccaccacgccatccagatacggaggtcgtcgtaccacgacgt 352 |||| || ||||||||||||||||| | ||||||| |||||||||||||||||| |||| Sbjct: 331 cctccccgcccaccgcgaccaccacgtcgtccagattcggaggtcgtcgtaccacaacgt 390 Query: 353 gatccgggtgtcggag 368 |||| ||||||||||| Sbjct: 391 gatcagggtgtcggag 406 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 163 ggccgccgtggctgaagccgctgctggcgacgagcttctt 202 |||| ||||||||| |||||||||| ||||||||||||| Sbjct: 201 ggccaccgtggctgcggccgctgctgtcgacgagcttctt 240
>dbj|AK065620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030D23, full insert sequence Length = 1762 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 395 cgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgagcgcccgcagcc 454 ||||||||||||| | ||||||||||| | ||||||||||||| ||||||||| | Sbjct: 533 cgtgcagacgtacgtgatcaacagcgccaagatcgtgttcctcaacggccgcccgcaggc 592 Query: 455 gaggccgggcaagggagtcaccaacacctgcgacgtctgcgagcgcagcctcctcgactc 514 |||||| || ||||| ||||||||||||||||| ||||| |||||||||| |||||| Sbjct: 593 gaggcccgggaagggcgtcaccaacacctgcgagatctgctgccgcagcctccccgactc 652 Query: 515 gttccgcttctgctccctcgg 535 |||||||||||||||||||| Sbjct: 653 cttccgcttctgctccctcgg 673 Score = 111 bits (56), Expect = 2e-21 Identities = 116/136 (85%) Strand = Plus / Plus Query: 233 caagagcgagtgcaacatgtactgcctcgactgcatcggcggcgcgctctgctcgctctg 292 ||||| |||||||||| | | |||||||| ||||| ||||| ||| |||||| | ||| Sbjct: 371 caagaacgagtgcaacctcttctgcctcggctgcaccggcgacgccctctgcgcctactg 430 Query: 293 cctcgcccaccaccgcgaccaccacgccatccagatacggaggtcgtcgtaccacgacgt 352 |||| || ||||||||||||||||| | ||||||| |||||||||||||||||| |||| Sbjct: 431 cctccccgcccaccgcgaccaccacgtcgtccagattcggaggtcgtcgtaccacaacgt 490 Query: 353 gatccgggtgtcggag 368 |||| ||||||||||| Sbjct: 491 gatcagggtgtcggag 506 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 163 ggccgccgtggctgaagccgctgctggcgacgagcttctt 202 |||| ||||||||| |||||||||| ||||||||||||| Sbjct: 301 ggccaccgtggctgcggccgctgctgtcgacgagcttctt 340
>dbj|AK061790.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-F02, full insert sequence Length = 1264 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 395 cgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgagcgcccgcagcc 454 ||||||||||||| | ||||||||||| | ||||||||||||| ||||||||| | Sbjct: 436 cgtgcagacgtacgtgatcaacagcgccaagatcgtgttcctcaacggccgcccgcaggc 495 Query: 455 gaggccgggcaagggagtcaccaacacctgcgacgtctgcgagcgcagcctcctcgactc 514 |||||| || ||||| ||||||||||||||||| ||||| |||||||||| |||||| Sbjct: 496 gaggcccgggaagggcgtcaccaacacctgcgagatctgctgccgcagcctccccgactc 555 Query: 515 gttccgcttctgctccctcgg 535 |||||||||||||||||||| Sbjct: 556 cttccgcttctgctccctcgg 576 Score = 73.8 bits (37), Expect = 5e-10 Identities = 111/136 (81%), Gaps = 6/136 (4%) Strand = Plus / Plus Query: 233 caagagcgagtgcaacatgtactgcctcgactgcatcggcggcgcgctctgctcgctctg 292 ||||| |||||||||| | | |||||||| ||||| ||||| ||| |||||| | ||| Sbjct: 280 caagaacgagtgcaacctcttctgcctcggctgcaccggcgacgccctctgcgcctactg 339 Query: 293 cctcgcccaccaccgcgaccaccacgccatccagatacggaggtcgtcgtaccacgacgt 352 |||| || ||||||||||||||||| ||| | ||||||||||||||||| |||| Sbjct: 340 cctccccgcccaccgcgaccaccacgtcattc------ggaggtcgtcgtaccacaacgt 393 Query: 353 gatccgggtgtcggag 368 |||| ||||||||||| Sbjct: 394 gatcagggtgtcggag 409 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 163 ggccgccgtggctgaagccgctgctggcgacgagcttctt 202 |||| ||||||||| |||||||||| ||||||||||||| Sbjct: 210 ggccaccgtggctgcggccgctgctgtcgacgagcttctt 249
>gb|AY107136.1| Zea mays PCO101290 mRNA sequence Length = 678 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 482 ctgcgacgtctgcgagcgcagcctcctcgactcgttccgcttctgctccctcgg 535 |||||| ||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 51 ctgcgaggtctgcgcccgcagcctcctcgacaacttccgcttctgctccctcgg 104
>dbj|AK060208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-B01, full insert sequence Length = 1538 Score = 54.0 bits (27), Expect = 5e-04 Identities = 108/135 (80%) Strand = Plus / Plus Query: 320 catccagatacggaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagagggt 379 ||||||||||||| | || || |||||||||||| | |||||| ||||| | || || Sbjct: 309 catccagatacggcgttcttcctaccacgacgtggttcgggtgacggaggtggaggacgt 368 Query: 380 gctggacatcaccggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaa 439 || |||||| ||||||| ||||| ||| ||||||||||||| || | |||||||| Sbjct: 369 cctcgacatctccggcgtccagacctacgtcatcaacagcgccaaggtcctcttcctcaa 428 Query: 440 cgagcgcccgcagcc 454 ||||||||| ||||| Sbjct: 429 cgagcgcccccagcc 443 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 503 cctcctcgactcgttccgcttctgctccctcgg 535 |||||||||| | |||||||||||||||||||| Sbjct: 513 cctcctcgaccccttccgcttctgctccctcgg 545 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 239 cgagtgcaacatgtactgcctcgactgc 266 |||||||||||||| ||||||||||||| Sbjct: 219 cgagtgcaacatgttctgcctcgactgc 246
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 503 cctcctcgactcgttccgcttctgctccctcgg 535 |||||||||| | |||||||||||||||||||| Sbjct: 28053382 cctcctcgaccccttccgcttctgctccctcgg 28053350 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 239 cgagtgcaacatgtactgcctcgactgc 266 |||||||||||||| ||||||||||||| Sbjct: 28053738 cgagtgcaacatgttctgcctcgactgc 28053711 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Minus Query: 384 gacatcaccggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgag 443 |||||| ||||||| ||||| ||| ||||||||||||| || | |||||||||||| Sbjct: 28053522 gacatctccggcgtccagacctacgtcatcaacagcgccaaggtcctcttcctcaacgag 28053463 Query: 444 cgcccgcagcc 454 ||||| ||||| Sbjct: 28053462 cgcccccagcc 28053452 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gctgaagccgctgctggcga 192 |||||||||||||||||||| Sbjct: 15007753 gctgaagccgctgctggcga 15007734
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 503 cctcctcgactcgttccgcttctgctccctcgg 535 |||||||||| | |||||||||||||||||||| Sbjct: 8931785 cctcctcgacccattccgcttctgctccctcgg 8931817 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 cgactgcatcggcggcgcgc 279 |||||||||||||||||||| Sbjct: 24117144 cgactgcatcggcggcgcgc 24117125
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 503 cctcctcgactcgttccgcttctgctccctcgg 535 |||||||||| | |||||||||||||||||||| Sbjct: 130874 cctcctcgaccccttccgcttctgctccctcgg 130842 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 239 cgagtgcaacatgtactgcctcgactgc 266 |||||||||||||| ||||||||||||| Sbjct: 131230 cgagtgcaacatgttctgcctcgactgc 131203 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Minus Query: 384 gacatcaccggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgag 443 |||||| ||||||| ||||| ||| ||||||||||||| || | |||||||||||| Sbjct: 131014 gacatctccggcgtccagacctacgtcatcaacagcgccaaggtcctcttcctcaacgag 130955 Query: 444 cgcccgcagcc 454 ||||| ||||| Sbjct: 130954 cgcccccagcc 130944
>dbj|AP004176.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1057_E05 Length = 103229 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 503 cctcctcgactcgttccgcttctgctccctcgg 535 |||||||||| | |||||||||||||||||||| Sbjct: 57942 cctcctcgacccattccgcttctgctccctcgg 57974
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 503 cctcctcgactcgttccgcttctgctccctcgg 535 |||||||||| | |||||||||||||||||||| Sbjct: 50877 cctcctcgaccccttccgcttctgctccctcgg 50845 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 239 cgagtgcaacatgtactgcctcgactgc 266 |||||||||||||| ||||||||||||| Sbjct: 51233 cgagtgcaacatgttctgcctcgactgc 51206 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Minus Query: 384 gacatcaccggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgag 443 |||||| ||||||| ||||| ||| ||||||||||||| || | |||||||||||| Sbjct: 51017 gacatctccggcgtccagacctacgtcatcaacagcgccaaggtcctcttcctcaacgag 50958 Query: 444 cgcccgcagcc 454 ||||| ||||| Sbjct: 50957 cgcccccagcc 50947
>ref|XM_464434.1| Oryza sativa (japonica cultivar-group), mRNA Length = 921 Score = 46.1 bits (23), Expect = 0.12 Identities = 98/123 (79%) Strand = Plus / Plus Query: 330 cggaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagagggtgctggacatc 389 |||||||||||||||||| ||||| | || ||||||||| | || | ||||||| | Sbjct: 277 cggaggtcgtcgtaccacaacgtggtgcgcgtgtcggagctggagcgcacgctggacctg 336 Query: 390 accggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgagcgcccg 449 || | |||||||| ||| |||||||| ||| | || || |||||||||||||||||| Sbjct: 337 acgcgggtgcagacctacgtcatcaaccgcgacagggtcgtcttcctcaacgagcgcccg 396 Query: 450 cag 452 ||| Sbjct: 397 cag 399 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 ttccgcttctgctccctcgg 535 |||||||||||||||||||| Sbjct: 487 ttccgcttctgctccctcgg 506
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 46.1 bits (23), Expect = 0.12 Identities = 98/123 (79%) Strand = Plus / Minus Query: 330 cggaggtcgtcgtaccacgacgtgatccgggtgtcggagatacagagggtgctggacatc 389 |||||||||||||||||| ||||| | || ||||||||| | || | ||||||| | Sbjct: 97792 cggaggtcgtcgtaccacaacgtggtgcgcgtgtcggagctggagcgcacgctggacctg 97733 Query: 390 accggcgtgcagacgtacatcatcaacagcgcgcgcgtggtgttcctcaacgagcgcccg 449 || | |||||||| ||| |||||||| ||| | || || |||||||||||||||||| Sbjct: 97732 acgcgggtgcagacctacgtcatcaaccgcgacagggtcgtcttcctcaacgagcgcccg 97673 Query: 450 cag 452 ||| Sbjct: 97672 cag 97670 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 ttccgcttctgctccctcgg 535 |||||||||||||||||||| Sbjct: 97582 ttccgcttctgctccctcgg 97563
>gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0086N07 map S790A, complete sequence Length = 178523 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 384 gacatcaccggcgtgcagacgtacatcatcaacagcgc 421 |||||| ||||||| ||||| ||| ||||||||||||| Sbjct: 43019 gacatctccggcgtccagacctacgtcatcaacagcgc 42982 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 503 cctcctcgactcgttccgcttctgctccct 532 |||||||||| | ||||||||||||||||| Sbjct: 42879 cctcctcgacccattccgcttctgctccct 42850
>gb|AC148237.7| Medicago truncatula clone mth2-1o14, complete sequence Length = 116678 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Minus Query: 450 cagccgaggccgggcaagggagtcaccaacacctgcgacgtctgcgagcgcagcctcctc 509 ||||| ||||| || || || ||||||||||| || || ||||||||||| ||||| ||| Sbjct: 72299 cagccaaggcccggaaaaggtgtcaccaacacttgtgaagtctgcgagcgtagccttctc 72240 Query: 510 ga 511 || Sbjct: 72239 ga 72238
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 503 cctcctcgactcgttccgcttctgctccct 532 |||||||||| | ||||||||||||||||| Sbjct: 13141201 cctcctcgacccattccgcttctgctccct 13141230 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 384 gacatcaccggcgtgcagacgtacatcatcaacagcgc 421 |||||| ||||||| ||||| ||| ||||||||||||| Sbjct: 13141061 gacatctccggcgtccagacctacgtcatcaacagcgc 13141098 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 96 ctcgcgctcaagagcggcggcgccacgg 123 |||||||||||| ||||||||| ||||| Sbjct: 6934980 ctcgcgctcaagggcggcggcggcacgg 6934953
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 296 cgcccaccaccgcgaccaccac 317 |||||||||||||||||||||| Sbjct: 1971109 cgcccaccaccgcgaccaccac 1971088 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 296 cgcccaccaccgcgaccaccacgcc 320 ||||||||||||||||| ||||||| Sbjct: 4564146 cgcccaccaccgcgacctccacgcc 4564122 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 ggaaccagcggtggccgccgt 171 ||||||||||||||||||||| Sbjct: 429476 ggaaccagcggtggccgccgt 429456
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 503 cctcctcgactcgttccgcttctgctccct 532 |||||||||| | ||||||||||||||||| Sbjct: 13221380 cctcctcgacccattccgcttctgctccct 13221409 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 384 gacatcaccggcgtgcagacgtacatcatcaacagcgc 421 |||||| ||||||| ||||| ||| ||||||||||||| Sbjct: 13221240 gacatctccggcgtccagacctacgtcatcaacagcgc 13221277 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 96 ctcgcgctcaagagcggcggcgccacgg 123 |||||||||||| ||||||||| ||||| Sbjct: 7001447 ctcgcgctcaagggcggcggcggcacgg 7001420 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cgcccaccaccgcgaccacc 315 |||||||||||||||||||| Sbjct: 3168316 cgcccaccaccgcgaccacc 3168335
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 cgccgtggctgaagccgctgc 186 ||||||||||||||||||||| Sbjct: 4657663 cgccgtggctgaagccgctgc 4657643
>gb|AC084109.2| Mus musculus strain C57BL6/J chromosome 5 clone RP23-38B15, complete sequence Length = 149453 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 cttccctcccctgccatcttg 39 ||||||||||||||||||||| Sbjct: 99617 cttccctcccctgccatcttg 99637
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 gtggctgaagccgctgctggc 190 ||||||||||||||||||||| Sbjct: 1411718 gtggctgaagccgctgctggc 1411698
>gb|AF411962.1| Xanthomonas oryzae pv. oryzae RpfA (rpfA) gene, partial cds; RpfB (rpfB) and RpfF (rpfF) genes, complete cds; and RpfC (rpfC) gene, partial cds Length = 4460 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 377 ggtgctggacatcaccggcgtgcag 401 ||||||||||||||||||| ||||| Sbjct: 591 ggtgctggacatcaccggcctgcag 615
>emb|AJ002070.1|XCAJ2070 Xanthomonas campestris rpfA gene, complete Length = 3450 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 377 ggtgctggacatcaccggcgtgcag 401 ||||||||||||||||||| ||||| Sbjct: 3093 ggtgctggacatcaccggcctgcag 3117
>gb|AE012288.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 196 of 460 of the complete genome Length = 9922 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 377 ggtgctggacatcaccggcgtgcag 401 ||||||||||||||||||| ||||| Sbjct: 2727 ggtgctggacatcaccggcctgcag 2703
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 377 ggtgctggacatcaccggcgtgcag 401 ||||||||||||||||||| ||||| Sbjct: 2816956 ggtgctggacatcaccggcctgcag 2816980
>gb|AC090056.2|AC090056 Oryza sativa chromosome 9 clone PAC0663H05, complete sequence Length = 161873 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 ttccctcccctgccatcttgc 40 ||||||||||||||||||||| Sbjct: 53036 ttccctcccctgccatcttgc 53056
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 ttccctcccctgccatcttgc 40 ||||||||||||||||||||| Sbjct: 6376624 ttccctcccctgccatcttgc 6376604
>dbj|AP005705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0453B09 Length = 173688 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 ttccctcccctgccatcttgc 40 ||||||||||||||||||||| Sbjct: 42701 ttccctcccctgccatcttgc 42681
>dbj|AP006758.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0663H05 Length = 161938 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 ttccctcccctgccatcttgc 40 ||||||||||||||||||||| Sbjct: 108903 ttccctcccctgccatcttgc 108883
>gb|AY107075.1| Zea mays PCO104394 mRNA sequence Length = 1098 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 gcggcggcgccacgggaggag 129 ||||||||||||||||||||| Sbjct: 231 gcggcggcgccacgggaggag 211
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 cacattcctctcctttcgcc 63 |||||||||||||||||||| Sbjct: 653077 cacattcctctcctttcgcc 653058
>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence Length = 1590432 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 cctcgcccaccaccgcgaccacca 316 ||||||||| |||||||||||||| Sbjct: 510586 cctcgcccagcaccgcgaccacca 510609
>gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032K12, complete sequence Length = 166936 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 96 ctcgcgctcaagagcggcggcgccacgg 123 |||||||||||| ||||||||| ||||| Sbjct: 60238 ctcgcgctcaagggcggcggcggcacgg 60211
>gb|AC145437.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022I08 map near C794A, complete sequence Length = 28207 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cgcccaccaccgcgaccacc 315 |||||||||||||||||||| Sbjct: 2421 cgcccaccaccgcgaccacc 2402
>gb|AC087325.9| Trypanosoma brucei chromosome 4 clone RPCI93-29M18, complete sequence Length = 123258 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 cctcgcccaccaccgcgaccacca 316 ||||||||| |||||||||||||| Sbjct: 62832 cctcgcccagcaccgcgaccacca 62855
>ref|XM_580981.2| PREDICTED: Bos taurus similar to frizzled 5 (LOC538536), mRNA Length = 1758 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 caagagcggcggcgccacgg 123 |||||||||||||||||||| Sbjct: 1635 caagagcggcggcgccacgg 1654
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 tgcctcgcccaccaccgcga 310 |||||||||||||||||||| Sbjct: 2027004 tgcctcgcccaccaccgcga 2026985
>ref|XM_545614.2| PREDICTED: Canis familiaris similar to frizzled 5 (LOC488493), mRNA Length = 1770 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 caagagcggcggcgccacgg 123 |||||||||||||||||||| Sbjct: 1635 caagagcggcggcgccacgg 1654
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 gtgctggacatcaccggcgtgcag 401 |||||||||||||||||| ||||| Sbjct: 2174839 gtgctggacatcaccggcctgcag 2174816
>emb|CT025598.9| Mouse DNA sequence from clone RP23-218L3 on chromosome 13, complete sequence Length = 228266 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 gcacagcatttcttccctcc 27 |||||||||||||||||||| Sbjct: 55849 gcacagcatttcttccctcc 55830
>ref|XM_820768.1| Trypanosoma brucei TREU927 clone RPCI93-29M18 hypothetical protein (Tb927.4.2030) partial mRNA Length = 654 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 293 cctcgcccaccaccgcgaccacca 316 ||||||||| |||||||||||||| Sbjct: 521 cctcgcccagcaccgcgaccacca 498
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 gtgctggacatcaccggcgtgcag 401 |||||||||||||||||| ||||| Sbjct: 3069526 gtgctggacatcaccggcctgcag 3069549
>gb|AE011822.1| Xanthomonas axonopodis pv. citri str. 306, section 200 of 469 of the complete genome Length = 12675 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 gtgctggacatcaccggcgtgcag 401 |||||||||||||||||| ||||| Sbjct: 335 gtgctggacatcaccggcctgcag 312
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 gccgccgtggctgaagccgc 183 |||||||||||||||||||| Sbjct: 22280221 gccgccgtggctgaagccgc 22280240
>gb|AY010116.1| Petromyzon marinus homeodomain protein DlxA (DlxA) mRNA, complete cds Length = 2468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 cggcgccacgggaggagcgg 132 |||||||||||||||||||| Sbjct: 637 cggcgccacgggaggagcgg 656
>emb|BX934363.1| Gallus gallus finished cDNA, clone ChEST668a11 Length = 1270 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ggctgaagccgctgctggcg 191 |||||||||||||||||||| Sbjct: 46 ggctgaagccgctgctggcg 65
>dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1710_H11 Length = 136107 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 cgactgcatcggcggcgcgc 279 |||||||||||||||||||| Sbjct: 50559 cgactgcatcggcggcgcgc 50540
>dbj|AP004621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689D06 Length = 146551 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gctgaagccgctgctggcga 192 |||||||||||||||||||| Sbjct: 6667 gctgaagccgctgctggcga 6648
>dbj|AP005866.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0076O03 Length = 140823 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gctgaagccgctgctggcga 192 |||||||||||||||||||| Sbjct: 140282 gctgaagccgctgctggcga 140263
>dbj|AK111558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054D24, full insert sequence Length = 3492 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 96 ctcgcgctcaagagcggcggcgccacgg 123 |||||||||||| ||||||||| ||||| Sbjct: 2429 ctcgcgctcaagggcggcggcggcacgg 2456
>dbj|AK105669.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A03, full insert sequence Length = 2627 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 96 ctcgcgctcaagagcggcggcgccacgg 123 |||||||||||| ||||||||| ||||| Sbjct: 1483 ctcgcgctcaagggcggcggcggcacgg 1510
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 ctcgcccaccaccgcgaccaccac 317 |||||| ||||||||||||||||| Sbjct: 2284453 ctcgcctaccaccgcgaccaccac 2284476
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 gtgctggacatcaccggcgtgcag 401 |||||||||||||||||| ||||| Sbjct: 3076749 gtgctggacatcaccggcctgcag 3076772
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 gcctcgcccaccaccgcgaccacc 315 |||||| ||||||||||||||||| Sbjct: 5375103 gcctcgaccaccaccgcgaccacc 5375126
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 gccgccgtggctgaagccgc 183 |||||||||||||||||||| Sbjct: 22208566 gccgccgtggctgaagccgc 22208585
>emb|AL731741.5|CNS08C7Q Oryza sativa chromosome 12, . BAC OJ1298_D03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109610 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gccgccgtggctgaagccgc 183 |||||||||||||||||||| Sbjct: 81533 gccgccgtggctgaagccgc 81514 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,600,764 Number of Sequences: 3902068 Number of extensions: 3600764 Number of successful extensions: 74584 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72405 Number of HSP's gapped (non-prelim): 2166 length of query: 554 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 531 effective length of database: 17,143,297,704 effective search space: 9103091080824 effective search space used: 9103091080824 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
