ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart55e05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NQR_ARATH (Q9LK88) NADPH:quinone oxidoreductase (EC 1.6.5.2) 42 3e-04
2NQR2_ORYSA (Q941Y8) Putative NADPH:quinone oxidoreductase 2 (EC ... 38 0.008
3NQR1_ORYSA (Q941Z0) Putative NADPH:quinone oxidoreductase 1 (EC ... 37 0.018
4NQR_SOLTU (Q8H9D2) NAD(P)H:quinone oxidoreductase (EC 1.6.5.2) (... 33 0.15
5INAR2_SHEEP (Q95207) Interferon-alpha/beta receptor beta chain p... 30 1.7
6CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel al... 29 2.9
7JAD1D_PANTR (Q5XUN4) Jumonji/ARID domain-containing protein 1D (... 28 6.5
8JAD1D_HUMAN (Q9BY66) Jumonji/ARID domain-containing protein 1D (... 28 6.5
9PG12A_MOUSE (Q9EPR2) Group XIIA secretory phospholipase A2 precu... 28 8.5
10PG12A_HUMAN (Q9BZM1) Group XIIA secretory phospholipase A2 precu... 28 8.5
11PERO_DROME (Q01603) Peroxidase precursor (EC 1.11.1.7) (DmPO) 28 8.5

>NQR_ARATH (Q9LK88) NADPH:quinone oxidoreductase (EC 1.6.5.2)|
          Length = 196

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = +1

Query: 112 ASTTAEPILRVAAISGSLRSNSWHVGLIRAA 204
           A T  +P++RVAA+SGSLR  S+H GL+RAA
Sbjct: 3   AVTAIKPLIRVAALSGSLRKTSFHTGLLRAA 33



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>NQR2_ORYSA (Q941Y8) Putative NADPH:quinone oxidoreductase 2 (EC 1.6.5.2)|
          Length = 203

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +1

Query: 118 TTAEPILRVAAISGSLRSNSWHVGLIRAAEE 210
           +T+   LRVAAISGSLR  S + GLIRAA+E
Sbjct: 4   STSPKALRVAAISGSLRRGSANTGLIRAAKE 34



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>NQR1_ORYSA (Q941Z0) Putative NADPH:quinone oxidoreductase 1 (EC 1.6.5.2)|
          Length = 197

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 17/30 (56%), Positives = 23/30 (76%)
 Frame = +1

Query: 115 STTAEPILRVAAISGSLRSNSWHVGLIRAA 204
           +  A P++RVAAI GSLR  S++ GL+RAA
Sbjct: 3   AAAARPVIRVAAICGSLRKASYNGGLLRAA 32



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>NQR_SOLTU (Q8H9D2) NAD(P)H:quinone oxidoreductase (EC 1.6.5.2) (NAD(P)H:QR)|
          Length = 194

 Score = 33.5 bits (75), Expect = 0.15
 Identities = 14/29 (48%), Positives = 22/29 (75%)
 Frame = +1

Query: 124 AEPILRVAAISGSLRSNSWHVGLIRAAEE 210
           A+P+++VA + GSLR  S++ GL+ AA E
Sbjct: 3   AQPVIKVAGLCGSLRKGSYNRGLLNAAME 31



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>INAR2_SHEEP (Q95207) Interferon-alpha/beta receptor beta chain precursor|
           (IFN-alpha-REC) (Type I interferon receptor) (IFN-R)
           (Interferon alpha/beta receptor-2)
          Length = 536

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 195 DEADVPRVAAEGAGDGGHTEDGLCRRRCSDGSHASILMICA 73
           DE+D+    A     GG+T+ GL  R C   + A+ L  C+
Sbjct: 323 DESDIENEVAPRVNSGGYTKHGLTGRLCPTSTTAASLEDCS 363



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>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.3)
            (Ca(v)3.3)
          Length = 2223

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 12/15 (80%), Positives = 12/15 (80%)
 Frame = -3

Query: 162  GAGDGGHTEDGLCRR 118
            GAG GG TE GLCRR
Sbjct: 1778 GAGGGGDTEGGLCRR 1792



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>JAD1D_PANTR (Q5XUN4) Jumonji/ARID domain-containing protein 1D (SmcY protein)|
          Length = 1535

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 30   NPSVNQAATHSQDVTRKSSRSKHGIHHCIDDGRAHPP 140
            +PSV++A    Q++   + R +   H C++  + HPP
Sbjct: 950  SPSVDKARAELQELLTIAERWEEKAHFCLEARQKHPP 986



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>JAD1D_HUMAN (Q9BY66) Jumonji/ARID domain-containing protein 1D (SmcY protein)|
            (Histocompatibility Y antigen) (H-Y)
          Length = 1539

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 30   NPSVNQAATHSQDVTRKSSRSKHGIHHCIDDGRAHPP 140
            +PSV++A    Q++   + R +   H C++  + HPP
Sbjct: 950  SPSVDKARAELQELLTIAERWEEKAHFCLEARQKHPP 986



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>PG12A_MOUSE (Q9EPR2) Group XIIA secretory phospholipase A2 precursor (EC|
           3.1.1.4) (Phosphatidylcholine 2-acylhydrolase GXII)
           (GXII sPLA2)
          Length = 192

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -3

Query: 138 EDGLCRRRCSDGS 100
           EDGLC+ +CSDGS
Sbjct: 62  EDGLCQYKCSDGS 74



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>PG12A_HUMAN (Q9BZM1) Group XIIA secretory phospholipase A2 precursor (EC|
           3.1.1.4) (Phosphatidylcholine 2-acylhydrolase GXII)
           (GXII sPLA2)
          Length = 189

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -3

Query: 138 EDGLCRRRCSDGS 100
           EDGLC+ +CSDGS
Sbjct: 59  EDGLCQYKCSDGS 71



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>PERO_DROME (Q01603) Peroxidase precursor (EC 1.11.1.7) (DmPO)|
          Length = 690

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
 Frame = +3

Query: 24  LHNPSVNQAATHSQDVTRKSSRS-KHGIHHCIDDGR------AHPPC 143
           LHN    Q  TH   +    ++S KH    C DDGR      AH  C
Sbjct: 174 LHNMQWGQIMTHDMSMQAGGTQSKKHPTRCCTDDGRLIGLDTAHKTC 220


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,693,159
Number of Sequences: 219361
Number of extensions: 474519
Number of successful extensions: 1486
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1486
length of database: 80,573,946
effective HSP length: 46
effective length of database: 70,483,340
effective search space used: 1691600160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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