>gb|AC153647.4| Mus musculus BAC clone RP24-396E16 from chromosome 1, complete sequence
          Length = 177775

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 9     cagtcactgatcaagctccaca 30
             ||||||||||||||||||||||
Sbjct: 17966 cagtcactgatcaagctccaca 17945

>gb|AC133168.3| Mus musculus BAC clone RP24-217I2 from 1, complete sequence
          Length = 169783

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 9     cagtcactgatcaagctccaca 30
             ||||||||||||||||||||||
Sbjct: 32071 cagtcactgatcaagctccaca 32092

>ref|NM_189784.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 612

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 186 cggcctcatccgcgccgccgaggag 210
           ||||||||||||||||||| |||||
Sbjct: 78  cggcctcatccgcgccgccaaggag 102

>ref|NM_189782.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 594

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 145 gccgccatctccggctccctccgca 169
           |||||||||| ||||||||||||||
Sbjct: 37  gccgccatctgcggctccctccgca 61

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 145      gccgccatctccggctccctccgca 169
                |||||||||| ||||||||||||||
Sbjct: 42001977 gccgccatctgcggctccctccgca 42001953

>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0431G06
          Length = 140466

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 145    gccgccatctccggctccctccgca 169
              |||||||||| ||||||||||||||
Sbjct: 104054 gccgccatctgcggctccctccgca 104030

>dbj|AK100697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114J09, full
           insert sequence
          Length = 3015

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 145 gccgccatctccggctccctccgca 169
           |||||||||| ||||||||||||||
Sbjct: 130 gccgccatctgcggctccctccgca 154

>dbj|AK071823.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120I15, full
           insert sequence
          Length = 956

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 145 gccgccatctccggctccctccgca 169
           |||||||||| ||||||||||||||
Sbjct: 169 gccgccatctgcggctccctccgca 193

>dbj|AK062729.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-E03, full
           insert sequence
          Length = 764

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 186 cggcctcatccgcgccgccgaggag 210
           ||||||||||||||||||| |||||
Sbjct: 106 cggcctcatccgcgccgccaaggag 130

>gb|AY106272.1| Zea mays PCO085431 mRNA sequence
          Length = 1019

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 129 gcccatcctccgtgtggccgccatctccggctccctccgca 169
           |||| |||| || ||||| ||||||| ||||||||||||||
Sbjct: 177 gcccgtcctgcgcgtggctgccatctgcggctccctccgca 217

>ref|XM_384435.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04259.1)
            partial mRNA
          Length = 1371

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 101  gatccatcactgcatcgacg 120
            ||||||||||||||||||||
Sbjct: 1063 gatccatcactgcatcgacg 1044

>gb|U88170.1| Caenorhabditis elegans cosmid C10G11, complete sequence
          Length = 36795

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   tctccggctccctccgcagc 171
             ||||||||||||||||||||
Sbjct: 15832 tctccggctccctccgcagc 15813

>gb|AC020630.21| Homo sapiens 3 BAC RP11-197N19 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164519

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     caacccatcagtaaaccaag 48
              ||||||||||||||||||||
Sbjct: 103343 caacccatcagtaaaccaag 103324

>gb|AC010674.11| Homo sapiens chromosome 15 clone RP11-430B1 map 15q21.1, complete
             sequence
          Length = 214415

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    aagcagccactcactctcag 65
             ||||||||||||||||||||
Sbjct: 60179 aagcagccactcactctcag 60160

>ref|NM_059412.3| Caenorhabditis elegans C10G11.7 (C10G11.7) mRNA, complete cds
          Length = 1633

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tctccggctccctccgcagc 171
           ||||||||||||||||||||
Sbjct: 949 tctccggctccctccgcagc 930

>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat
          Length = 243019

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   cctcatccgcgccgccgagg 208
             ||||||||||||||||||||
Sbjct: 93191 cctcatccgcgccgccgagg 93210

>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat
          Length = 273746

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   cctcatccgcgccgccgagg 208
             ||||||||||||||||||||
Sbjct: 93191 cctcatccgcgccgccgagg 93210


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,402,553
Number of Sequences: 3902068
Number of extensions: 1402553
Number of successful extensions: 97182
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97106
Number of HSP's gapped (non-prelim): 76
length of query: 212
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 190
effective length of database: 17,147,199,772
effective search space: 3257967956680
effective search space used: 3257967956680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)