ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart55d10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_186147.1| Oryza sativa (japonica cultivar-group), mRNA 113 7e-22
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 113 7e-22
3dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic D... 113 7e-22
4dbj|AK121984.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 7e-22
5dbj|AK103166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 7e-22
6dbj|AK064359.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 7e-22
7gb|BT024033.1| Zea mays clone EL01N0423B02 mRNA sequence 86 2e-13
8gb|AY968588.1| Triticum aestivum ice recrystallization inhibitio... 62 2e-06
9gb|AY968589.1| Triticum aestivum ice recrystallization inhibitio... 52 0.002
10emb|Z69381.1|SCCXIV39K S.cerevisiae 38,855 bp segment of chromos... 46 0.14
11emb|Z71506.1|SCYNL230C S.cerevisiae chromosome XIV reading frame... 46 0.14
12gb|DQ332669.1| Synthetic construct Saccharomyces cerevisiae clon... 46 0.14
13emb|AL160059.7| Human DNA sequence from clone RP11-94G15 on chro... 42 2.1
14gb|AC146750.32| Medicago truncatula clone mth2-16o6, complete se... 42 2.1
15emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 42 2.1
16gb|BC027167.1| Mus musculus zinc finger protein 445, mRNA (cDNA ... 40 8.5
17gb|BC034572.1| Mus musculus zinc finger protein 445, mRNA (cDNA ... 40 8.5
18gb|BC055684.1| Mus musculus zinc finger protein 445, mRNA (cDNA ... 40 8.5
19ref|NM_173364.4| Mus musculus zinc finger protein 445 (Zfp445), ... 40 8.5
20gb|AC122396.4| Mus musculus BAC clone RP24-89O12 from chromosome... 40 8.5
21gb|AC127345.4| Mus musculus BAC clone RP23-217K23 from chromosom... 40 8.5
22gb|AC123842.4| Mus musculus BAC clone RP23-400N18 from chromosom... 40 8.5
23gb|AC125374.4| Mus musculus BAC clone RP23-438P19 from chromosom... 40 8.5
24gb|BC099930.1| Mus musculus zinc finger protein 445, mRNA (cDNA ... 40 8.5
25gb|AY341877.1| Mus musculus zinc finger protein 445 mRNA, comple... 40 8.5
26emb|AL445649.15| Human DNA sequence from clone RP11-381O6 on chr... 40 8.5
27gb|AC136297.6| Homo sapiens chromosome 11, clone CTD-2245O6, com... 40 8.5
28emb|AL808125.11| Mouse DNA sequence from clone RP23-193L22 on ch... 40 8.5
29gb|AE005723.1| Caulobacter crescentus CB15 section 49 of 359 of ... 40 8.5
30dbj|AK036132.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 8.5
31gb|AE004824.1| Pseudomonas aeruginosa PAO1, section 385 of 529 o... 40 8.5
32gb|AC073606.19| Homo sapiens 12 BAC RP11-390N6 (Roswell Park Can... 40 8.5
33dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
34dbj|AP005296.5| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
35emb|CT025545.28| Mouse DNA sequence from clone RP24-88C18 on chr... 40 8.5
36emb|X98424.1|DMTNCIRC D.melanogaster Circe transposable element 40 8.5

>ref|NM_186147.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3033

 Score =  113 bits (57), Expect = 7e-22
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                        
Query: 506  tggcccttggtgattgttctctcaggggcagggttccggaatggttgtctcaatgcaaga 565
            ||||||||||||||||| |||||||||| ||||| ||||||||| ||  ||| |||||||
Sbjct: 1268 tggcccttggtgattgtgctctcaggggaagggtcccggaatggctgcatcagtgcaaga 1327

                                                             
Query: 566  aaatggaggtgcttgatttgtcccgcaaccaattgataggcaccatccc 614
             | |||||||||||||||||||| | ||||||||| | |||||||||||
Sbjct: 1328 gactggaggtgcttgatttgtcctggaaccaattggttggcaccatccc 1376



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 413  agaacctcaccacgttgattctcaccaagaattt 446
            |||||||||||||  |||| ||||||||||||||
Sbjct: 1178 agaacctcaccacactgatcctcaccaagaattt 1211



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 271 gcgctgcgcctccccaggcgcggcctcacggggcccatccc 311
           ||||||||||||||| |||| || |||  ||||||||||||
Sbjct: 238 gcgctgcgcctccccgggcgaggtctcgaggggcccatccc 278



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score =  113 bits (57), Expect = 7e-22
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                          
Query: 506    tggcccttggtgattgttctctcaggggcagggttccggaatggttgtctcaatgcaaga 565
              ||||||||||||||||| |||||||||| ||||| ||||||||| ||  ||| |||||||
Sbjct: 425364 tggcccttggtgattgtgctctcaggggaagggtcccggaatggctgcatcagtgcaaga 425423

                                                               
Query: 566    aaatggaggtgcttgatttgtcccgcaaccaattgataggcaccatccc 614
               | |||||||||||||||||||| | ||||||||| | |||||||||||
Sbjct: 425424 gactggaggtgcttgatttgtcctggaaccaattggttggcaccatccc 425472



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 413    agaacctcaccacgttgattctcaccaagaattt 446
              |||||||||||||  |||| ||||||||||||||
Sbjct: 425274 agaacctcaccacactgatcctcaccaagaattt 425307



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 271    gcgctgcgcctccccaggcgcggcctcacggggcccatccc 311
              ||||||||||||||| |||| || |||  ||||||||||||
Sbjct: 424334 gcgctgcgcctccccgggcgaggtctcgaggggcccatccc 424374



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 364      aacaatttacaaaacatctc 383
                ||||||||||||||||||||
Sbjct: 22474510 aacaatttacaaaacatctc 22474491



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>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0585H11
          Length = 149371

 Score =  113 bits (57), Expect = 7e-22
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                         
Query: 506   tggcccttggtgattgttctctcaggggcagggttccggaatggttgtctcaatgcaaga 565
             ||||||||||||||||| |||||||||| ||||| ||||||||| ||  ||| |||||||
Sbjct: 27528 tggcccttggtgattgtgctctcaggggaagggtcccggaatggctgcatcagtgcaaga 27587

                                                              
Query: 566   aaatggaggtgcttgatttgtcccgcaaccaattgataggcaccatccc 614
              | |||||||||||||||||||| | ||||||||| | |||||||||||
Sbjct: 27588 gactggaggtgcttgatttgtcctggaaccaattggttggcaccatccc 27636



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 413   agaacctcaccacgttgattctcaccaagaattt 446
             |||||||||||||  |||| ||||||||||||||
Sbjct: 27438 agaacctcaccacactgatcctcaccaagaattt 27471



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 271   gcgctgcgcctccccaggcgcggcctcacggggcccatccc 311
             ||||||||||||||| |||| || |||  ||||||||||||
Sbjct: 26498 gcgctgcgcctccccgggcgaggtctcgaggggcccatccc 26538



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>dbj|AK121984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108O10, full
            insert sequence
          Length = 3392

 Score =  113 bits (57), Expect = 7e-22
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                        
Query: 506  tggcccttggtgattgttctctcaggggcagggttccggaatggttgtctcaatgcaaga 565
            ||||||||||||||||| |||||||||| ||||| ||||||||| ||  ||| |||||||
Sbjct: 1394 tggcccttggtgattgtgctctcaggggaagggtcccggaatggctgcatcagtgcaaga 1453

                                                             
Query: 566  aaatggaggtgcttgatttgtcccgcaaccaattgataggcaccatccc 614
             | |||||||||||||||||||| | ||||||||| | |||||||||||
Sbjct: 1454 gactggaggtgcttgatttgtcctggaaccaattggttggcaccatccc 1502



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 413  agaacctcaccacgttgattctcaccaagaattt 446
            |||||||||||||  |||| ||||||||||||||
Sbjct: 1304 agaacctcaccacactgatcctcaccaagaattt 1337



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 271 gcgctgcgcctccccaggcgcggcctcacggggcccatccc 311
           ||||||||||||||| |||| || |||  ||||||||||||
Sbjct: 364 gcgctgcgcctccccgggcgaggtctcgaggggcccatccc 404



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>dbj|AK103166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121E13, full
            insert sequence
          Length = 2958

 Score =  113 bits (57), Expect = 7e-22
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                        
Query: 506  tggcccttggtgattgttctctcaggggcagggttccggaatggttgtctcaatgcaaga 565
            ||||||||||||||||| |||||||||| ||||| ||||||||| ||  ||| |||||||
Sbjct: 932  tggcccttggtgattgtgctctcaggggaagggtcccggaatggctgcatcagtgcaaga 991

                                                             
Query: 566  aaatggaggtgcttgatttgtcccgcaaccaattgataggcaccatccc 614
             | |||||||||||||||||||| | ||||||||| | |||||||||||
Sbjct: 992  gactggaggtgcttgatttgtcctggaaccaattggttggcaccatccc 1040



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 413 agaacctcaccacgttgattctcaccaagaattt 446
           |||||||||||||  |||| ||||||||||||||
Sbjct: 842 agaacctcaccacactgatcctcaccaagaattt 875



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>dbj|AK064359.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B08, full
           insert sequence
          Length = 2238

 Score =  113 bits (57), Expect = 7e-22
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                       
Query: 506 tggcccttggtgattgttctctcaggggcagggttccggaatggttgtctcaatgcaaga 565
           ||||||||||||||||| |||||||||| ||||| ||||||||| ||  ||| |||||||
Sbjct: 79  tggcccttggtgattgtgctctcaggggaagggtcccggaatggctgcatcagtgcaaga 138

                                                            
Query: 566 aaatggaggtgcttgatttgtcccgcaaccaattgataggcaccatccc 614
            | |||||||||||||||||||| | ||||||||| | |||||||||||
Sbjct: 139 gactggaggtgcttgatttgtcctggaaccaattggttggcaccatccc 187



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>gb|BT024033.1| Zea mays clone EL01N0423B02 mRNA sequence
          Length = 2283

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 103/123 (83%)
 Strand = Plus / Plus

                                                                       
Query: 499 gaggtactggcccttggtgattgttctctcaggggcagggttccggaatggttgtctcaa 558
           ||||| |||||||||||||||||| |||||||||| ||||||||  | ||| |  |||| 
Sbjct: 207 gaggtgctggcccttggtgattgtgctctcaggggaagggttcccaagtggctcgctcag 266

                                                                       
Query: 559 tgcaagaaaatggaggtgcttgatttgtcccgcaaccaattgataggcaccatcccatcg 618
           ||||||||  |||||||||||||| ||||| | ||||||||| | |||  |||||| |||
Sbjct: 267 tgcaagaagctggaggtgcttgatctgtcctggaaccaattggttggcgtcatcccctcg 326

              
Query: 619 tgg 621
           |||
Sbjct: 327 tgg 329



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                            
Query: 413 agaacctcaccacgttgattctcaccaagaattttggtggtgaggagct 461
           |||||||||||||| | || ||||||||||||||||  || ||||||||
Sbjct: 124 agaacctcaccacgcttatcctcaccaagaattttgtcggggaggagct 172



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>gb|AY968588.1| Triticum aestivum ice recrystallization inhibition protein 1
           precursor, mRNA, complete cds
          Length = 1079

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 85/103 (82%)
 Strand = Plus / Plus

                                                                       
Query: 256 agcggccgtgtgacagcgctgcgcctccccaggcgcggcctcacggggcccatcccaggg 315
           ||||||||||| || |||||||| |||||  ||| |||||||  ||||| ||||||||| 
Sbjct: 284 agcggccgtgtcacggcgctgcggctccctgggcacggcctcgtggggctcatcccagga 343

                                                      
Query: 316 acctcccttgccggccttgcacggctcgaggatctcgaccttg 358
            | ||| | || |||||||||||||| ||||| ||| ||||||
Sbjct: 344 gcatccttggcaggccttgcacggctagaggagctcaaccttg 386



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>gb|AY968589.1| Triticum aestivum ice recrystallization inhibition protein 2
           precursor, mRNA, complete cds
          Length = 1596

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 291 cggcctcacggggcccatcccagggacctcccttgccggcct 332
           ||||||| ||||||||||||||||  |||||||||| |||||
Sbjct: 249 cggcctcgcggggcccatcccaggagcctcccttgcgggcct 290



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>emb|Z69381.1|SCCXIV39K S.cerevisiae 38,855 bp segment of chromosome XIV
          Length = 38855

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 78    ccttgtagtcttcttggcgtttctctt 104
             ||||||||||||||||| |||||||||
Sbjct: 27605 ccttgtagtcttcttggtgtttctctt 27631



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>emb|Z71506.1|SCYNL230C S.cerevisiae chromosome XIV reading frame ORF YNL230c
          Length = 2094

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 78   ccttgtagtcttcttggcgtttctctt 104
            ||||||||||||||||| |||||||||
Sbjct: 1069 ccttgtagtcttcttggtgtttctctt 1095



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>gb|DQ332669.1| Synthetic construct Saccharomyces cerevisiae clone FLH144475.01X
           ELA1 gene, complete sequence
          Length = 1140

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 78  ccttgtagtcttcttggcgtttctctt 104
           ||||||||||||||||| |||||||||
Sbjct: 552 ccttgtagtcttcttggtgtttctctt 526



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>emb|AL160059.7| Human DNA sequence from clone RP11-94G15 on chromosome 1 Contains the
             5' end of the CACNA1E gene for calcium channel
             voltage-dependent alpha 1E subunit, complete sequence
          Length = 153926

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 290   gcggcctcacggggcccatcc 310
             |||||||||||||||||||||
Sbjct: 33108 gcggcctcacggggcccatcc 33088



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>gb|AC146750.32| Medicago truncatula clone mth2-16o6, complete sequence
          Length = 114206

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 347   atctcgaccttggctccaaca 367
             |||||||||||||||||||||
Sbjct: 46898 atctcgaccttggctccaaca 46878



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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 314     ggacctcccttgccggccttg 334
               |||||||||||||||||||||
Sbjct: 2899847 ggacctcccttgccggccttg 2899827



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>gb|BC027167.1| Mus musculus zinc finger protein 445, mRNA (cDNA clone
           IMAGE:4953934), partial cds
          Length = 2835

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 79  cttgtagtcttcttggcgtttctcttgt 106
           |||| |||||||||| ||||||||||||
Sbjct: 824 cttgaagtcttcttgacgtttctcttgt 797



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>gb|BC034572.1| Mus musculus zinc finger protein 445, mRNA (cDNA clone
           IMAGE:4018895), partial cds
          Length = 2699

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 79  cttgtagtcttcttggcgtttctcttgt 106
           |||| |||||||||| ||||||||||||
Sbjct: 688 cttgaagtcttcttgacgtttctcttgt 661



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>gb|BC055684.1| Mus musculus zinc finger protein 445, mRNA (cDNA clone
           IMAGE:6410700), complete cds
          Length = 2386

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 79  cttgtagtcttcttggcgtttctcttgt 106
           |||| |||||||||| ||||||||||||
Sbjct: 375 cttgaagtcttcttgacgtttctcttgt 348



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>ref|NM_173364.4| Mus musculus zinc finger protein 445 (Zfp445), mRNA
          Length = 4033

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 79   cttgtagtcttcttggcgtttctcttgt 106
            |||| |||||||||| ||||||||||||
Sbjct: 2023 cttgaagtcttcttgacgtttctcttgt 1996



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>gb|AC122396.4| Mus musculus BAC clone RP24-89O12 from chromosome 5, complete
            sequence
          Length = 205737

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 352  gaccttggctccaacaattt 371
            ||||||||||||||||||||
Sbjct: 6742 gaccttggctccaacaattt 6723



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>gb|AC127345.4| Mus musculus BAC clone RP23-217K23 from chromosome 5, complete sequence
          Length = 210748

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 352    gaccttggctccaacaattt 371
              ||||||||||||||||||||
Sbjct: 112169 gaccttggctccaacaattt 112188



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>gb|AC123842.4| Mus musculus BAC clone RP23-400N18 from chromosome 10, complete
             sequence
          Length = 200997

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    acagagcacttgccaaatca 31
             ||||||||||||||||||||
Sbjct: 83033 acagagcacttgccaaatca 83014



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>gb|AC125374.4| Mus musculus BAC clone RP23-438P19 from chromosome 9, complete sequence
          Length = 175440

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 79     cttgtagtcttcttggcgtttctcttgt 106
              |||| |||||||||| ||||||||||||
Sbjct: 104086 cttgaagtcttcttgacgtttctcttgt 104059



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>gb|BC099930.1| Mus musculus zinc finger protein 445, mRNA (cDNA clone MGC:107357
            IMAGE:30058096), complete cds
          Length = 4033

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 79   cttgtagtcttcttggcgtttctcttgt 106
            |||| |||||||||| ||||||||||||
Sbjct: 2023 cttgaagtcttcttgacgtttctcttgt 1996



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>gb|AY341877.1| Mus musculus zinc finger protein 445 mRNA, complete cds
          Length = 3788

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 79   cttgtagtcttcttggcgtttctcttgt 106
            |||| |||||||||| ||||||||||||
Sbjct: 1919 cttgaagtcttcttgacgtttctcttgt 1892



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>emb|AL445649.15| Human DNA sequence from clone RP11-381O6 on chromosome 13, complete
             sequence
          Length = 190126

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 364   aacaatttacaaaacatctc 383
             ||||||||||||||||||||
Sbjct: 76052 aacaatttacaaaacatctc 76071



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>gb|AC136297.6| Homo sapiens chromosome 11, clone CTD-2245O6, complete sequence
          Length = 185908

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   gggcccatcccagggacctc 320
             ||||||||||||||||||||
Sbjct: 74445 gggcccatcccagggacctc 74464



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>emb|AL808125.11| Mouse DNA sequence from clone RP23-193L22 on chromosome 2, complete
              sequence
          Length = 236619

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     gccaaatgcttcatgctgct 77
              ||||||||||||||||||||
Sbjct: 139163 gccaaatgcttcatgctgct 139144



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>gb|AE005723.1| Caulobacter crescentus CB15 section 49 of 359 of the complete genome
          Length = 10573

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 338  ggctcgaggatctcgacctt 357
            ||||||||||||||||||||
Sbjct: 3881 ggctcgaggatctcgacctt 3862



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>dbj|AK036132.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:9630038D24 product:MSZF50
           (FRAGMENT) homolog [Mus musculus], full insert sequence
          Length = 2237

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 79  cttgtagtcttcttggcgtttctcttgt 106
           |||| |||||||||| ||||||||||||
Sbjct: 241 cttgaagtcttcttgacgtttctcttgt 214



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>gb|AE004824.1| Pseudomonas aeruginosa PAO1, section 385 of 529 of the complete
            genome
          Length = 9910

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 310  ccagggacctcccttgccggcctt 333
            ||||||||||||| ||||||||||
Sbjct: 3283 ccagggacctcccctgccggcctt 3306



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>gb|AC073606.19| Homo sapiens 12 BAC RP11-390N6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 145430

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 368   atttacaaaacatctcaggg 387
             ||||||||||||||||||||
Sbjct: 63151 atttacaaaacatctcaggg 63170



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>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0406F06
          Length = 144533

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 364    aacaatttacaaaacatctc 383
              ||||||||||||||||||||
Sbjct: 135577 aacaatttacaaaacatctc 135558



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>dbj|AP005296.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1720_F04
          Length = 105227

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   aacaatttacaaaacatctc 383
             ||||||||||||||||||||
Sbjct: 17998 aacaatttacaaaacatctc 17979



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>emb|CT025545.28| Mouse DNA sequence from clone RP24-88C18 on chromosome 12, complete
             sequence
          Length = 266295

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 523   tctctcaggggcagggttcc 542
             ||||||||||||||||||||
Sbjct: 22377 tctctcaggggcagggttcc 22396



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>emb|X98424.1|DMTNCIRC D.melanogaster Circe transposable element
          Length = 6356

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 550  ttgtctcaatgcaagaaaat 569
            ||||||||||||||||||||
Sbjct: 1254 ttgtctcaatgcaagaaaat 1273


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,322,496
Number of Sequences: 3902068
Number of extensions: 4322496
Number of successful extensions: 72371
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72236
Number of HSP's gapped (non-prelim): 134
length of query: 621
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 598
effective length of database: 17,143,297,704
effective search space: 10251692026992
effective search space used: 10251692026992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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