ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart55d03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473498.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1539 Score = 67.9 bits (34), Expect = 6e-09 Identities = 40/42 (95%) Strand = Plus / Plus Query: 8 cgccgacgccgcggccggtgtcggccccgccgtcgcagatac 49 |||||||||||| |||||||||| |||||||||||||||||| Sbjct: 32 cgccgacgccgccgccggtgtcgaccccgccgtcgcagatac 73
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 67.9 bits (34), Expect = 6e-09 Identities = 40/42 (95%) Strand = Plus / Minus Query: 8 cgccgacgccgcggccggtgtcggccccgccgtcgcagatac 49 |||||||||||| |||||||||| |||||||||||||||||| Sbjct: 120287 cgccgacgccgccgccggtgtcgaccccgccgtcgcagatac 120246
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 67.9 bits (34), Expect = 6e-09 Identities = 40/42 (95%) Strand = Plus / Minus Query: 8 cgccgacgccgcggccggtgtcggccccgccgtcgcagatac 49 |||||||||||| |||||||||| |||||||||||||||||| Sbjct: 28113062 cgccgacgccgccgccggtgtcgaccccgccgtcgcagatac 28113021 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 gccgccgacgccgcggccg 24 ||||||||||||||||||| Sbjct: 29250035 gccgccgacgccgcggccg 29250053 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggccggtg 27 |||||||| |||||||||||||| Sbjct: 24377519 cgccgccgccgccgcggccggtg 24377497
>dbj|AK060598.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G11, full insert sequence Length = 1765 Score = 67.9 bits (34), Expect = 6e-09 Identities = 40/42 (95%) Strand = Plus / Plus Query: 8 cgccgacgccgcggccggtgtcggccccgccgtcgcagatac 49 |||||||||||| |||||||||| |||||||||||||||||| Sbjct: 118 cgccgacgccgccgccggtgtcgaccccgccgtcgcagatac 159
>gb|AF419325.2| Mycobacterium avium subsp. paratuberculosis putative ABC transporter gene, complete cds Length = 8745 Score = 52.0 bits (26), Expect = 4e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 81 gcgcgcgatggcgtcgccgctcgcca 106 |||||||||||||||||||||||||| Sbjct: 739 gcgcgcgatggcgtcgccgctcgcca 714
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 52.0 bits (26), Expect = 4e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 81 gcgcgcgatggcgtcgccgctcgcca 106 |||||||||||||||||||||||||| Sbjct: 4159407 gcgcgcgatggcgtcgccgctcgcca 4159432 Score = 40.1 bits (20), Expect = 1.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 8 cgccgacgccgcggccggtgtcggcccc 35 ||||||||||| ||||||||||||||| Sbjct: 4005334 cgccgacgccggcgccggtgtcggcccc 4005361 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 tcggcgccgccgacgccgc 19 ||||||||||||||||||| Sbjct: 767171 tcggcgccgccgacgccgc 767189
>ref|NM_189652.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 Score = 44.1 bits (22), Expect = 0.088 Identities = 28/30 (93%) Strand = Plus / Plus Query: 4 gcgccgccgacgccgcggccggtgtcggcc 33 ||||||||| |||||||||||||| ||||| Sbjct: 95 gcgccgccgccgccgcggccggtggcggcc 124
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.088 Identities = 28/30 (93%) Strand = Plus / Plus Query: 4 gcgccgccgacgccgcggccggtgtcggcc 33 ||||||||| |||||||||||||| ||||| Sbjct: 4799351 gcgccgccgccgccgcggccggtggcggcc 4799380 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 38468982 cggcgccgccgacgccgccgccg 38468960
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 44.1 bits (22), Expect = 0.088 Identities = 28/30 (93%) Strand = Plus / Plus Query: 4 gcgccgccgacgccgcggccggtgtcggcc 33 ||||||||| |||||||||||||| ||||| Sbjct: 44000 gcgccgccgccgccgcggccggtggcggcc 44029
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.088 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggccggt 26 |||||||||||||||||||||| Sbjct: 3684879 cgccgccgacgccgcggccggt 3684858 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cgcggccggtgtcggccccg 36 |||||||||||||||||||| Sbjct: 5340167 cgcggccggtgtcggccccg 5340148 Score = 38.2 bits (19), Expect = 5.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 1 tcggcgccgccgacgccgcggccggtg 27 ||||| ||||||||||||||| ||||| Sbjct: 3259942 tcggcaccgccgacgccgcggtcggtg 3259968
>ref|XM_464829.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 42.1 bits (21), Expect = 0.35 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 tcggcgccgccgacgccgcggccgg 25 |||||||||||| |||||||||||| Sbjct: 464 tcggcgccgccgccgccgcggccgg 488
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 42.1 bits (21), Expect = 0.35 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 tcggcgccgccgacgccgcgg 21 ||||||||||||||||||||| Sbjct: 111009 tcggcgccgccgacgccgcgg 111029
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 0.35 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 tcggcgccgccgacgccgcgg 21 ||||||||||||||||||||| Sbjct: 21223350 tcggcgccgccgacgccgcgg 21223330 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 4434044 cggcgccgccgacgccgccgccg 4434022
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 0.35 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 tcggcgccgccgacgccgcggccgg 25 |||||||||||| |||||||||||| Sbjct: 8416221 tcggcgccgccgccgccgcggccgg 8416197 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ctccggcgccgcccagccgg 72 |||||||||||||||||||| Sbjct: 20160428 ctccggcgccgcccagccgg 20160409 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 35027753 cggcgccgccgacgccgccgccg 35027775 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 21080710 cgccgccgacgccgcggcc 21080728
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 0.35 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 tgcgcgcgatggcgtcgccgc 100 ||||||||||||||||||||| Sbjct: 1571702 tgcgcgcgatggcgtcgccgc 1571722 Score = 42.1 bits (21), Expect = 0.35 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 tcggcgccgccgacgccgcgg 21 ||||||||||||||||||||| Sbjct: 3145 tcggcgccgccgacgccgcgg 3165 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccgg 25 |||||||||||||| ||||||||| Sbjct: 2860020 cggcgccgccgacggcgcggccgg 2859997 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 cgccgccgacgccgcggccg 24 |||||||||||||||||||| Sbjct: 838335 cgccgccgacgccgcggccg 838354 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 cggcgccgccgacgccgcg 20 ||||||||||||||||||| Sbjct: 4273297 cggcgccgccgacgccgcg 4273315 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 cggcgccgccgacgccgcg 20 ||||||||||||||||||| Sbjct: 1331030 cggcgccgccgacgccgcg 1331048
>dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011N12 Length = 158586 Score = 42.1 bits (21), Expect = 0.35 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 tcggcgccgccgacgccgcggccgg 25 |||||||||||| |||||||||||| Sbjct: 69071 tcggcgccgccgccgccgcggccgg 69047
>gb|AF119361.1|AF119361 Frankia sp. EuIK1 NifK (nifK), NifE (nifE), NifN (nifN), NifX (nifX), NifW (nifW), NifZ (nifZ), NifB (nifB), NifV (nifV), NifS (nifS), ferredoxin oxidoreductase a-subunit, ferredoxin oxidoreductase b-subunit, and ferredoxin I (fdxI) genes, complete cds; and unknown genes Length = 15056 Score = 42.1 bits (21), Expect = 0.35 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 tcggcgccgccgacgccgcgg 21 ||||||||||||||||||||| Sbjct: 10611 tcggcgccgccgacgccgcgg 10631
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 0.35 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 tcggcgccgccgacgccgcgg 21 ||||||||||||||||||||| Sbjct: 21234614 tcggcgccgccgacgccgcgg 21234594 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 4434865 cggcgccgccgacgccgccgccg 4434843
>ref|XM_482854.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1565 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 tcggcgccgccgacgccgcggccg 24 ||||||||| |||||||||||||| Sbjct: 865 tcggcgccgacgacgccgcggccg 888
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcgg 21 |||||||||||||||||||| Sbjct: 561710 cggcgccgccgacgccgcgg 561691
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 tcggcgccgccgacgccgcg 20 |||||||||||||||||||| Sbjct: 3136146 tcggcgccgccgacgccgcg 3136127 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gcgatggcgtcgccgctcgc 104 |||||||||||||||||||| Sbjct: 1327407 gcgatggcgtcgccgctcgc 1327426
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 1.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 72 gtcgccgctgcgcgcgatggcgtcgccg 99 |||| ||||||||| ||||||||||||| Sbjct: 193827 gtcgtcgctgcgcgagatggcgtcgccg 193800 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcg 20 ||||||||||||||||||| Sbjct: 508417 cggcgccgccgacgccgcg 508399
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 cgccgctgcgcgcgatggcg 93 |||||||||||||||||||| Sbjct: 224725 cgccgctgcgcgcgatggcg 224706
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 tcggcgccgccgacgccgcggccg 24 ||||||| |||||||||||||||| Sbjct: 3884342 tcggcgcggccgacgccgcggccg 3884319 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 tcggcgccgccgacgccgc 19 ||||||||||||||||||| Sbjct: 495575 tcggcgccgccgacgccgc 495593
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 tcggcgccgccgacgccgcggccg 24 ||||||||| |||||||||||||| Sbjct: 22976853 tcggcgccgacgacgccgcggccg 22976876 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 23796977 cgccgccgacgccgcggcc 23796959
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 gcgccgccgacgccgcggccggtg 27 ||||||||||||||| |||||||| Sbjct: 6491687 gcgccgccgacgccgaggccggtg 6491710 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 8 cgccgacgccgcggccggtgtcg 30 ||||||||||||| ||||||||| Sbjct: 6495512 cgccgacgccgcgtccggtgtcg 6495490 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||| |||||||||||||||||| Sbjct: 1466623 cggcaccgccgacgccgcggccg 1466601
>dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0472F10 Length = 136076 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ctccggcgccgcccagccgg 72 |||||||||||||||||||| Sbjct: 33734 ctccggcgccgcccagccgg 33715
>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0104B02 Length = 169588 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 tcggcgccgccgacgccgcggccg 24 ||||||||| |||||||||||||| Sbjct: 150691 tcggcgccgacgacgccgcggccg 150714
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 tcggcgccgccgacgccgcggccg 24 ||||||||| |||||||||||||| Sbjct: 36581 tcggcgccgacgacgccgcggccg 36604
>dbj|AK105541.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-H10, full insert sequence Length = 1567 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 tcggcgccgccgacgccgcggccg 24 ||||||||| |||||||||||||| Sbjct: 866 tcggcgccgacgacgccgcggccg 889
>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138585 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcgccgccgacgccgcggcc 23 |||||||||||||||||||| Sbjct: 1492 gcgccgccgacgccgcggcc 1473
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 cagccggtcgccgctgcgc 84 ||||||||||||||||||| Sbjct: 1963156 cagccggtcgccgctgcgc 1963138
>ref|XM_482997.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1412 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 1085 cgccgccgacgccgcggcc 1103
>ref|XM_507271.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0092C08.26 mRNA Length = 1916 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 1082 cgccgccgacgccgcggcc 1100
>ref|XM_509432.1| PREDICTED: Pan troglodytes similar to expressed sequence AA407659 (LOC452313), mRNA Length = 710 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgccgacgccgcggccg 24 ||||||||||||||||||| Sbjct: 188 gccgccgacgccgcggccg 170
>ref|NM_195060.1| Oryza sativa (japonica cultivar-group) putative acid cluster protein 33 (OSJNBb0081F12.21), mRNA Length = 936 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 42 cggcgccgccgacgccgccgccg 20
>ref|XM_470048.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1307 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 642 cggcgccgccgacgccgccgccg 620
>ref|XM_469835.1| Oryza sativa (japonica cultivar-group), mRNA Length = 945 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcg 20 ||||||||||||||||||| Sbjct: 610 cggcgccgccgacgccgcg 592
>ref|XM_468400.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2355 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 36 cggcgccgccgacgccgccgccg 14
>ref|XM_466212.1| Oryza sativa (japonica cultivar-group), mRNA Length = 819 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 624 cgccgccgacgccgcggcc 642
>ref|XM_466213.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1052 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 236 cgccgccgacgccgcggcc 218
>ref|XM_506826.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_F08.20 mRNA Length = 1060 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 241 cgccgccgacgccgcggcc 223
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 83 gcgcgatggcgtcgccgctcgcc 105 ||||||||||||||||| ||||| Sbjct: 2131806 gcgcgatggcgtcgccgttcgcc 2131784
>ref|NM_204796.1| Gallus gallus neurogenin 2 (NGN2/ATH4A), mRNA Length = 1341 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 ggcgccgccgacgccgcggccgg 25 |||||||||||||||||| |||| Sbjct: 530 ggcgccgccgacgccgcgcccgg 552
>ref|XM_478648.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1628 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1 tcggcgccgccgacgccgcggcc 23 |||||||||||| |||||||||| Sbjct: 258 tcggcgccgccgccgccgcggcc 236
>ref|NM_186391.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1086 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||| |||||||| Sbjct: 650 cggcgccgccgacgtcgcggccg 628
>ref|XM_473634.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1860 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgccgacgccgcggccg 24 ||||||||||||||||||| Sbjct: 239 gccgccgacgccgcggccg 221
>gb|BC070088.1| Homo sapiens hypothetical protein MGC5139, mRNA (cDNA clone IMAGE:30344414), with apparent retained intron Length = 4471 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgccgacgccgcggccg 24 ||||||||||||||||||| Sbjct: 56 gccgccgacgccgcggccg 38
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 gcgccgccgacgccgcggc 22 ||||||||||||||||||| Sbjct: 1927050 gcgccgccgacgccgcggc 1927068
>ref|XM_870315.1| PREDICTED: Bos taurus similar to NK1 transcription factor-related protein 2 (Homeobox protein SAX-1) (NKX-1.1) (LOC617982), mRNA Length = 978 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 555 cgccgccgacgccgcggcc 537
>ref|XM_589317.2| PREDICTED: Bos taurus similar to Serine/threonine-protein kinase PLK3 (Polo-like kinase 3) (PLK-3) (Cytokine-inducible serine/threonine-protein kinase) (FGF-inducible kinase) (LOC511891), partial mRNA Length = 1926 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggccggtg 27 |||||||| |||||||||||||| Sbjct: 248 cgccgccgccgccgcggccggtg 226
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 60 gccgcccagccggtcgccg 78 ||||||||||||||||||| Sbjct: 605428 gccgcccagccggtcgccg 605446
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 gcgccgccgacgccgcggc 22 ||||||||||||||||||| Sbjct: 1776132 gcgccgccgacgccgcggc 1776150 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 cgccgcggccggtgtcggc 32 ||||||||||||||||||| Sbjct: 799916 cgccgcggccggtgtcggc 799934
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 gcgccgccgacgccgcggc 22 ||||||||||||||||||| Sbjct: 1502850 gcgccgccgacgccgcggc 1502832
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 48 accctctccggcgccgcccagcc 70 |||||||||||| |||||||||| Sbjct: 1095590 accctctccggcaccgcccagcc 1095568
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 53 ctccggcgccgcccagccggtcg 75 ||||||||||||||||| ||||| Sbjct: 3488393 ctccggcgccgcccagcgggtcg 3488415
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcg 20 ||||||||||||||||||| Sbjct: 2985132 cggcgccgccgacgccgcg 2985114
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 33670954 cggcgccgccgacgccgccgccg 33670932 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 cggcgccgccgacgccgcg 20 ||||||||||||||||||| Sbjct: 31019839 cggcgccgccgacgccgcg 31019857
>ref|XM_754335.1| Ustilago maydis 521 hypothetical protein (UM03281.1) partial mRNA Length = 3612 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 79 ctgcgcgcgatggcgtcgc 97 ||||||||||||||||||| Sbjct: 857 ctgcgcgcgatggcgtcgc 839
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 65 ccagccggtcgccgctgcg 83 ||||||||||||||||||| Sbjct: 4922221 ccagccggtcgccgctgcg 4922239
>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12 Length = 306250 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 gccgccgacgccgcggccg 24 ||||||||||||||||||| Sbjct: 19837 gccgccgacgccgcggccg 19855
>emb|AJ786317.1| Streptomyces fradiae putative neomycin biosynthetic gene cluster, strain ATCC 10745 Length = 42149 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 60 gccgcccagccggtcgccg 78 ||||||||||||||||||| Sbjct: 21382 gccgcccagccggtcgccg 21400
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcg 20 ||||||||||||||||||| Sbjct: 76225 cggcgccgccgacgccgcg 76207
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence Length = 452156 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 cggcgccgccgacgccgcg 20 ||||||||||||||||||| Sbjct: 287051 cggcgccgccgacgccgcg 287069
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 56 cggcgccgcccagccggtcgccg 78 ||||||||||||||||| ||||| Sbjct: 127763 cggcgccgcccagccgggcgccg 127785
>gb|AY341859.1| Oryza sativa (japonica cultivar-group) WRKY19 mRNA, complete cds Length = 1276 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcg 20 ||||||||||||||||||| Sbjct: 705 cggcgccgccgacgccgcg 687
>gb|AC137507.3| Oryza sativa chromosome 3 BAC OSJNBb0033J23 genomic sequence, complete sequence Length = 126862 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 42323 cggcgccgccgacgccgccgccg 42301
>ref|XM_964702.1| PREDICTED: Tribolium castaneum similar to forkhead box K1 (LOC658300), mRNA Length = 2451 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 tgcgcgcgatggcgtcgcc 98 ||||||||||||||||||| Sbjct: 259 tgcgcgcgatggcgtcgcc 241
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 gcgccgccgacgccgcggc 22 ||||||||||||||||||| Sbjct: 3111432 gcgccgccgacgccgcggc 3111450 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 cgccgcggccggtgtcggc 32 ||||||||||||||||||| Sbjct: 2120166 cgccgcggccggtgtcggc 2120184
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 gcgccgccgacgccgcggc 22 ||||||||||||||||||| Sbjct: 1389938 gcgccgccgacgccgcggc 1389920
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 gccgcggccggtgtcggcc 33 ||||||||||||||||||| Sbjct: 210743 gccgcggccggtgtcggcc 210725
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 gcgccgccgacgccgcggc 22 ||||||||||||||||||| Sbjct: 40469 gcgccgccgacgccgcggc 40487
>emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064M23, complete sequence Length = 149892 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 gccgccgacgccgcggccg 24 ||||||||||||||||||| Sbjct: 53081 gccgccgacgccgcggccg 53099
>emb|AL662946.2|OSJN00139 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991113_30, complete sequence Length = 141128 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggccggtg 27 |||||||| |||||||||||||| Sbjct: 93930 cgccgccgccgccgcggccggtg 93908
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 1085819 cggcgccgccgacgccgccgccg 1085797 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 1085456 cggcgccgccgacgccgccgccg 1085434
>emb|AJ242746.1|REQ242746 Rhodococcus equi corU1, choE, corD1 and corD2 genes Length = 3912 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 1095 cgccgccgacgccgcggcc 1077
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 tcggcgccgccgacgccgc 19 ||||||||||||||||||| Sbjct: 5279046 tcggcgccgccgacgccgc 5279028
>dbj|AK126367.1| Homo sapiens cDNA FLJ44403 fis, clone TUTER2000904, moderately similar to Unc-119 protein Length = 2816 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgccgacgccgcggccg 24 ||||||||||||||||||| Sbjct: 61 gccgccgacgccgcggccg 43
>gb|AE005973.1| Caulobacter crescentus CB15 section 299 of 359 of the complete genome Length = 10123 Score = 38.2 bits (19), Expect = 5.4 Identities = 25/27 (92%) Strand = Plus / Minus Query: 1 tcggcgccgccgacgccgcggccggtg 27 |||||||||||| ||||| |||||||| Sbjct: 6524 tcggcgccgccgtcgccgtggccggtg 6498
>gb|AE005926.1| Caulobacter crescentus CB15 section 252 of 359 of the complete genome Length = 10961 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 71 ggtcgccgctgcgcgcgat 89 ||||||||||||||||||| Sbjct: 9959 ggtcgccgctgcgcgcgat 9977
>gb|AE005688.1| Caulobacter crescentus CB15 section 14 of 359 of the complete genome Length = 14376 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 11 cgacgccgcggccggtgtcggcc 33 |||||||| |||||||||||||| Sbjct: 4103 cgacgccggggccggtgtcggcc 4125
>gb|AC148582.14| Gasterosteus aculeatus clone ch213-241e10, complete sequence Length = 209278 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgccgacgccgcggccg 24 ||||||||||||||||||| Sbjct: 202226 gccgccgacgccgcggccg 202208
>gb|AE012069.1| Xanthomonas axonopodis pv. citri str. 306, section 447 of 469 of the complete genome Length = 10901 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 65 ccagccggtcgccgctgcg 83 ||||||||||||||||||| Sbjct: 9316 ccagccggtcgccgctgcg 9334
>gb|AE011646.1| Xanthomonas axonopodis pv. citri str. 306, section 24 of 469 of the complete genome Length = 10352 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 cagccggtcgccgctgcgc 84 ||||||||||||||||||| Sbjct: 8278 cagccggtcgccgctgcgc 8260
>tpg|BK005006.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 3 (WRKY3) gene, complete cds Length = 3406 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcg 20 ||||||||||||||||||| Sbjct: 3071 cggcgccgccgacgccgcg 3053
>dbj|AB211959.1| Streptomyces fradiae orf6, neoU, neoT, neoS, neoR, neoA, neoB, neoC, neoD, neoE, neoF, neoG, neoH, neoI, neoJ, neoK, neoL, neoM, neoN, neoO, neoP, neoQ, orf1, orf2, orf3, orf4, orf5 genes, complete and partial cds Length = 39237 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 60 gccgcccagccggtcgccg 78 ||||||||||||||||||| Sbjct: 3136 gccgcccagccggtcgccg 3118
>dbj|AB206671.1| Rhodococcus opacus o-xylene oxygenase gene cluster (nidE, nidF, nidA, nidB, nidC, nidD), complete cds Length = 15017 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 2951 cgccgccgacgccgcggcc 2933
>gb|AC090488.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081F12 from chromosome 10, complete sequence Length = 128388 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 95652 cggcgccgccgacgccgccgccg 95630
>ref|XM_946241.1| PREDICTED: Homo sapiens hypothetical protein MGC5139, transcript variant 4 (MGC5139), mRNA Length = 3234 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgccgacgccgcggccg 24 ||||||||||||||||||| Sbjct: 485 gccgccgacgccgcggccg 467
>ref|XM_942692.1| PREDICTED: Homo sapiens hypothetical protein MGC5139, transcript variant 3 (MGC5139), mRNA Length = 4799 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgccgacgccgcggccg 24 ||||||||||||||||||| Sbjct: 485 gccgccgacgccgcggccg 467
>ref|XM_934229.1| PREDICTED: Homo sapiens hypothetical protein MGC5139, transcript variant 2 (MGC5139), mRNA Length = 3234 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgccgacgccgcggccg 24 ||||||||||||||||||| Sbjct: 485 gccgccgacgccgcggccg 467
>ref|XM_930036.1| PREDICTED: Homo sapiens hypothetical protein MGC5139, transcript variant 1 (MGC5139), mRNA Length = 4799 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgccgacgccgcggccg 24 ||||||||||||||||||| Sbjct: 485 gccgccgacgccgcggccg 467
>gb|AF303000.1|AF303000 Gallus gallus neurogenin 2 gene, complete cds Length = 1880 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 ggcgccgccgacgccgcggccgg 25 |||||||||||||||||| |||| Sbjct: 545 ggcgccgccgacgccgcgcccgg 567
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 38.2 bits (19), Expect = 5.4 Identities = 28/31 (90%) Strand = Plus / Plus Query: 70 cggtcgccgctgcgcgcgatggcgtcgccgc 100 |||| ||||| |||||||||||| ||||||| Sbjct: 4505003 cggtggccgccgcgcgcgatggcttcgccgc 4505033
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 gcgccgccgacgccgcggc 22 ||||||||||||||||||| Sbjct: 2259157 gcgccgccgacgccgcggc 2259175 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 cgccgcggccggtgtcggc 32 ||||||||||||||||||| Sbjct: 1694502 cgccgcggccggtgtcggc 1694520
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 65 ccagccggtcgccgctgcg 83 ||||||||||||||||||| Sbjct: 2893705 ccagccggtcgccgctgcg 2893723
>gb|AC105020.18| Homo sapiens chromosome 15, clone CTD-2026K11, complete sequence Length = 110820 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 gctcgccagccccgtgaag 117 ||||||||||||||||||| Sbjct: 12592 gctcgccagccccgtgaag 12574
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 18349590 cgccgccgacgccgcggcc 18349572 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 5 cgccgccgacgccgcggccggtg 27 |||||||| |||||||||||||| Sbjct: 2381796 cgccgccgccgccgcggccggtg 2381818
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1 tcggcgccgccgacgccgcggcc 23 |||||||||||| |||||||||| Sbjct: 21801400 tcggcgccgccgccgccgcggcc 21801378 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||| |||||||| Sbjct: 3235869 cggcgccgccgacgtcgcggccg 3235847
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 33761426 cggcgccgccgacgccgccgccg 33761404 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 cggcgccgccgacgccgcg 20 ||||||||||||||||||| Sbjct: 31110362 cggcgccgccgacgccgcg 31110380
>gb|AC069234.35| Homo sapiens 12 BAC RP11-173P15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183354 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 gccgccgacgccgcggccg 24 ||||||||||||||||||| Sbjct: 107677 gccgccgacgccgcggccg 107695
>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence Length = 193444 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 62079 cggcgccgccgacgccgccgccg 62057
>gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasmid pSV2, complete sequence Length = 96742 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 90267 cgccgccgacgccgcggcc 90285
>gb|DQ345780.1| Brevibacterium sp. DGCDC-82 cholesterol oxidase (choB) gene, complete cds Length = 1656 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 478 cgccgccgacgccgcggcc 460
>gb|AC104758.12| Homo sapiens chromosome 15, clone RP11-114H24, complete sequence Length = 175763 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 gctcgccagccccgtgaag 117 ||||||||||||||||||| Sbjct: 36084 gctcgccagccccgtgaag 36066
>gb|AC010913.9| Homo sapiens BAC clone RP11-44N22 from 2, complete sequence Length = 209161 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 ||||||||||| ||||||||||| Sbjct: 181756 cggcgccgccgccgccgcggccg 181734
>gb|AF121905.1|AF121905 Rhodococcus sp. I24 aromatic compound bioconversion gene cluster, complete sequence Length = 11465 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 46 cgccgccgacgccgcggcc 28
>dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408G07 Length = 126631 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 54397 cggcgccgccgacgccgccgccg 54375
>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534A03 Length = 153170 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1 tcggcgccgccgacgccgcggcc 23 |||||||||||| |||||||||| Sbjct: 118583 tcggcgccgccgccgccgcggcc 118561
>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0092C08 Length = 131049 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 86177 cgccgccgacgccgcggcc 86159
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 3188387 cgccgccgacgccgcggcc 3188369
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 tcggcgccgccgacgccgc 19 ||||||||||||||||||| Sbjct: 1500899 tcggcgccgccgacgccgc 1500917
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 ggcgccgcccagccggtcg 75 ||||||||||||||||||| Sbjct: 6479111 ggcgccgcccagccggtcg 6479129 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgccgacgccgcggccg 24 ||||||||||||||||||| Sbjct: 4186455 gccgccgacgccgcggccg 4186437
>gb|AY963570.1| Arthrobacter sp. F2 cholesterol oxidase (choF) gene, complete cds Length = 1656 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 478 cgccgccgacgccgcggcc 460
>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455F03 Length = 158201 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||| |||||||| Sbjct: 150859 cggcgccgccgacgtcgcggccg 150837
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 88094 cggcgccgccgacgccgccgccg 88116
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 916 cggcgccgccgacgccgccgccg 938
>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_F08 Length = 105979 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 82455 cgccgccgacgccgcggcc 82473
>emb|AJ012659.1|GGA012659 Gallus gallus ngn2/ath4a gene Length = 790 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 ggcgccgccgacgccgcggccgg 25 |||||||||||||||||| |||| Sbjct: 545 ggcgccgccgacgccgcgcccgg 567
>dbj|AK121255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102B22, full insert sequence Length = 1653 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 gcgccgccgacgccgcggc 22 ||||||||||||||||||| Sbjct: 1231 gcgccgccgacgccgcggc 1249
>ref|XM_321287.2| Anopheles gambiae str. PEST ENSANGP00000018326 (ENSANGG00000015837), partial mRNA Length = 1818 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 gcggccggtgtcggccccgccgt 40 |||||||||| |||||||||||| Sbjct: 995 gcggccggtgccggccccgccgt 973
>dbj|AK109553.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-C01, full insert sequence Length = 1642 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1 tcggcgccgccgacgccgcggcc 23 |||||||||||| |||||||||| Sbjct: 258 tcggcgccgccgccgccgcggcc 236
>dbj|AK106818.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-D05, full insert sequence Length = 1927 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 1082 cgccgccgacgccgcggcc 1100
>gb|AF109014.1|AF109014 Gallus gallus neurogenin 2 mRNA, complete cds Length = 1341 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 ggcgccgccgacgccgcggccgg 25 |||||||||||||||||| |||| Sbjct: 530 ggcgccgccgacgccgcgcccgg 552
>dbj|AK100294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075P18, full insert sequence Length = 2231 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgccgacgccgcggccg 24 ||||||||||||||||||| Sbjct: 420 gccgccgacgccgcggccg 402
>dbj|AK100187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023033O22, full insert sequence Length = 1060 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 241 cgccgccgacgccgcggcc 223
>dbj|AK099638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059N04, full insert sequence Length = 2688 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggccggtg 27 |||||||| |||||||||||||| Sbjct: 84 cgccgccgccgccgcggccggtg 62
>dbj|AK069091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008G15, full insert sequence Length = 1046 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcg 20 ||||||||||||||||||| Sbjct: 205 cggcgccgccgacgccgcg 187
>dbj|AK068244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013140I04, full insert sequence Length = 1412 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 1085 cgccgccgacgccgcggcc 1103
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 82 cgcgcgatggcgtcgccgc 100 ||||||||||||||||||| Sbjct: 298561 cgcgcgatggcgtcgccgc 298543
>dbj|AK067281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100H18, full insert sequence Length = 1521 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 105 cggcgccgccgacgccgccgccg 83
>dbj|AK062586.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F04, full insert sequence Length = 1086 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||| |||||||| Sbjct: 650 cggcgccgccgacgtcgcggccg 628
>dbj|AK060580.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-G04, full insert sequence Length = 1052 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 236 cgccgccgacgccgcggcc 218
>dbj|AK059523.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C09, full insert sequence Length = 1515 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||||||| |||| Sbjct: 77 cggcgccgccgacgccgccgccg 55
>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041B22 Length = 142446 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1 tcggcgccgccgacgccgcggcc 23 |||||||||||| |||||||||| Sbjct: 15076 tcggcgccgccgccgccgcggcc 15054
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 cggcgccgccgacgccgcggccg 24 |||||||||||||| |||||||| Sbjct: 45562 cggcgccgccgacgtcgcggccg 45540
>gb|AY104389.1| Zea mays PCO082855 mRNA sequence Length = 1612 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 ccgccgacgccgcggccgg 25 ||||||||||||||||||| Sbjct: 153 ccgccgacgccgcggccgg 135
>gb|AF123884.1|AF123884 Gallus gallus neurogenin 2 mRNA, partial cds Length = 770 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 ggcgccgccgacgccgcggccgg 25 |||||||||||||||||| |||| Sbjct: 424 ggcgccgccgacgccgcgcccgg 446
>dbj|D00712.1|BRLCHOB Brevibacterium sterolicum choB gene for cholesterol oxidase, complete cds Length = 2385 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 1094 cgccgccgacgccgcggcc 1076
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 gccgccgacgccgcggccg 24 ||||||||||||||||||| Sbjct: 3712477 gccgccgacgccgcggccg 3712459 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 83 gcgcgatggcgtcgccgctcgcc 105 ||||||||||| ||||||||||| Sbjct: 2611878 gcgcgatggcgacgccgctcgcc 2611900 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 5 cgccgccgacgccgcggccggtg 27 ||||||||||||||| ||||||| Sbjct: 74313 cgccgccgacgccgcagccggtg 74335
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 38.2 bits (19), Expect = 5.4 Identities = 25/27 (92%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggccggtgtcgg 31 |||||||||| ||||||||||||||| Sbjct: 2732591 cgccgccgaccgcgcggccggtgtcgg 2732565
>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence Length = 230278 Score = 38.2 bits (19), Expect = 5.4 Identities = 25/27 (92%) Strand = Plus / Minus Query: 1 tcggcgccgccgacgccgcggccggtg 27 |||||||||||| |||||| ||||||| Sbjct: 70208 tcggcgccgccgccgccgctgccggtg 70182
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 gccggtgtcggccccgccg 39 ||||||||||||||||||| Sbjct: 661123 gccggtgtcggccccgccg 661141
>emb|AJ629247.1| Streptomyces fradiae neomycin biosynthesis gene cluster, strain DSM 40063 Length = 50466 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 60 gccgcccagccggtcgccg 78 ||||||||||||||||||| Sbjct: 8327 gccgcccagccggtcgccg 8309
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 18275911 cgccgccgacgccgcggcc 18275893 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 5 cgccgccgacgccgcggccggtg 27 |||||||| |||||||||||||| Sbjct: 2381740 cgccgccgccgccgcggccggtg 2381762
>emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC OSJNBa0023M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 156258 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 5 cgccgccgacgccgcggccggtg 27 |||||||| |||||||||||||| Sbjct: 106987 cgccgccgccgccgcggccggtg 107009
>emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa0087A02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 177034 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 21404 cgccgccgacgccgcggcc 21422
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 tcggcgccgccgacgccgc 19 ||||||||||||||||||| Sbjct: 6703974 tcggcgccgccgacgccgc 6703992
>gb|M31939.1|STMCHOPA Streptomyces sp. cytochrome-P450-like protein (choP) gene and cholesterol oxidase (choA) gene, complete cds Length = 3104 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cgccgccgacgccgcggcc 23 ||||||||||||||||||| Sbjct: 1814 cgccgccgacgccgcggcc 1796 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 819,096 Number of Sequences: 3902068 Number of extensions: 819096 Number of successful extensions: 85609 Number of sequences better than 10.0: 149 Number of HSP's better than 10.0 without gapping: 161 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71609 Number of HSP's gapped (non-prelim): 14000 length of query: 118 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 97 effective length of database: 17,151,101,840 effective search space: 1663656878480 effective search space used: 1663656878480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
