ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart55d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK071403.1| Oryza sativa (japonica cultivar-group) cDNA clon... 428 e-117
2ref|XM_463175.1| Oryza sativa (japonica cultivar-group), mRNA 396 e-107
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 283 3e-73
4gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genom... 283 3e-73
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 283 3e-73
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
7dbj|AP005615.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
8dbj|AP005771.2| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
10emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4,... 50 0.007
11dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
12dbj|AK102183.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.028
13gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.028
14emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Partial se... 48 0.028
15emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327... 48 0.028
16ref|NM_187908.1| Oryza sativa (japonica cultivar-group), Ozsa835... 46 0.11
17gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 46 0.11
18ref|XM_536411.2| PREDICTED: Canis familiaris similar to LIM doma... 46 0.11
19ref|XM_859961.1| PREDICTED: Canis familiaris similar to LIM doma... 46 0.11
20ref|XM_847022.1| PREDICTED: Canis familiaris similar to LIM doma... 46 0.11
21ref|XM_859907.1| PREDICTED: Canis familiaris similar to LIM doma... 46 0.11
22ref|XM_859755.1| PREDICTED: Canis familiaris similar to LIM doma... 46 0.11
23emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome... 46 0.11
24emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 46 0.11
25gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 46 0.11
26dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
27dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
28dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
29gb|U33011.1|MTU33011 Mycobacterium tuberculosis urease structura... 46 0.11
30gb|L41141.1|MSGUREA Mycobacterium tuberculosis ureA, ureB and ur... 46 0.11
31ref|XM_483431.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.43
32ref|NM_187704.1| Oryza sativa (japonica cultivar-group), predic... 44 0.43
33ref|XM_606959.2| PREDICTED: Bos taurus similar to Cyclin-depende... 44 0.43
34gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic ... 44 0.43
35gb|AE005955.1| Caulobacter crescentus CB15 section 281 of 359 of... 44 0.43
36dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
37dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
38dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
39dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
40dbj|AK120803.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
41dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
42gb|AC142244.11| Mus musculus chromosome 1, clone RP23-79H24, com... 42 1.7
43ref|NM_185679.1| Oryza sativa (japonica cultivar-group), Ozsa803... 42 1.7
44gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 42 1.7
45gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
46gb|AC125780.2| Oryza sativa (japonica culitvar-group) chromosome... 42 1.7
47gb|AC113970.8| Mus musculus chromosome 1, clone RP23-125E16, com... 42 1.7
48ref|XM_843108.1| Leishmania major strain Friedlin hypothetical p... 42 1.7
49emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete ... 42 1.7
50dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
51dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
52dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
53dbj|AK111279.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
54dbj|AK106678.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
55gb|AC142561.3| Didelphis virginiana clone LB3-9F6, complete sequ... 42 1.7
56dbj|AK099635.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
57dbj|AK064281.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
58gb|AE015451.1| Pseudomonas putida KT2440 complete genome 42 1.7
59gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
60gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold 42 1.7
61ref|XM_550107.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.8
62gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 40 6.8
63ref|XM_467671.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.8
64ref|XM_466699.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.8
65ref|XM_466630.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.8
66ref|XM_506858.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 6.8
67ref|NM_191054.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
68gb|AY487937.1| Myxococcus xanthus hypothetical protein gene, par... 40 6.8
69gb|AC154644.2| Mus musculus BAC clone RP23-278G20 from chromosom... 40 6.8
70emb|Z81135.1|CEW01G7 Caenorhabditis elegans Cosmid W01G7, comple... 40 6.8
71gb|AY271660.1| Actinomadura madurae maduropeptin biosynthesis ge... 40 6.8
72gb|AY038367.1| Human herpesvirus 2 strain KN 53690 DNA polymeras... 40 6.8
73gb|AY038366.1| Human herpesvirus 2 strain RR 60279 DNA polymeras... 40 6.8
74gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.8
75emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52),... 40 6.8
76emb|BX927152.1| Corynebacterium glutamicum ATCC 13032, IS finger... 40 6.8
77emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... 40 6.8
78dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
79gb|AE005745.1| Caulobacter crescentus CB15 section 71 of 359 of ... 40 6.8
80gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 6.8
81gb|AC093872.3| Homo sapiens BAC clone RP11-610P19 from 4, comple... 40 6.8
82gb|AC008937.7| Homo sapiens chromosome 5 clone CTD-2310F14, comp... 40 6.8
83gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 6.8
84gb|AC154419.2| Mus musculus BAC clone RP24-212C1 from chromosome... 40 6.8
85gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.8
86ref|NM_064542.2| Caenorhabditis elegans W01G7.4 (W01G7.4) mRNA, ... 40 6.8
87dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
88dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 40 6.8
89dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.8
90gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.8
91dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
92dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
93dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 6.8
94dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
95dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
96dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
97dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
98dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
99dbj|AK107118.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
100dbj|AK104293.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
101dbj|AK099700.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
102gb|AC006021.2|AC006021 Homo sapiens PAC clone RP5-1129L24 from 7... 40 6.8
103gb|BT024140.1| Zea mays clone EL01N0442G04 mRNA sequence 40 6.8
104gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 40 6.8
105dbj|AK061044.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
106emb|CT025694.11| Mouse DNA sequence from clone RP24-66N5 on chro... 40 6.8
107emb|CR761112.2| Xenopus tropicalis finished cDNA, clone TEgg072j10 40 6.8
108gb|U08864.1|PDU08864 Paracoccus denitrificans phosphate acetyltr... 40 6.8
109gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 40 6.8
110gb|M14793.1|HS2POLD Herpes simplex virus type 2 (strain 186) DNA... 40 6.8
111gb|M16321.1|HS2POL HSV-2 DNA polymerase gene, complete cds 40 6.8
112dbj|AB001885.1| Oryza sativa (japonica cultivar-group) mRNA for ... 40 6.8 
>dbj|AK071403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089B10, full
           insert sequence
          Length = 907

 Score =  428 bits (216), Expect = e-117
 Identities = 311/343 (90%)
 Strand = Plus / Plus

                                                                       
Query: 155 agcgccgcaacggcaacgtcccggccgtgctgctcaccctcgccggccccgggcccgggg 214
           ||||||||| ||||  ||||||||||||||| ||| ||||||||||| |||| |||||||
Sbjct: 141 agcgccgcagcggccgcgtcccggccgtgctactcgccctcgccggcgccggccccgggg 200

                                                                       
Query: 215 aaggggtcgcccaccggaagctccttaccaccgacaagaagcagctcgcggagatgctga 274
           | ||||| ||||||||||||||||| ||| |||||| ||||||||||| |||||| ||||
Sbjct: 201 agggggtggcccaccggaagctcctcaccgccgacaggaagcagctcggggagattctga 260

                                                                       
Query: 275 agcagtcgccctacttcctctccaccccggtccgcctccaggtccgcgccggcgagcgat 334
           ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 agcagtccccctacttcctctccacccccgtccgcctccaggtccgcgccggcgagcgat 320

                                                                       
Query: 335 ccaccgccgtcgtgcactctggcaccgtgctccccatcaaggtgcagacagatgaatcaa 394
           ||||||||||||||||||| ||||| || ||||| ||||||||||| | ||| ||| |||
Sbjct: 321 ccaccgccgtcgtgcactccggcactgtcctccctatcaaggtgcatagagacgaaacaa 380

                                                                       
Query: 395 cagggaatatattgaacttggtgatggtggaagcagatgaaggaacaatgctgaaggtga 454
           |||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 381 caggaaatatattgaacttggtgctggtggaggcagatgaaggaacaatgctgaaggtga 440

                                                      
Query: 455 atttgcccgtagtgttcaagggggaggatgtctgccctgngtt 497
           | ||||| |||| ||||||||||||||| |||||||||| |||
Sbjct: 441 acttgcctgtagagttcaagggggaggacgtctgccctgggtt 483



 Score =  115 bits (58), Expect = 1e-22
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                       
Query: 67  ccgtggcggcgggcggcctcggcgtcgtaccaccacacgatccaggcggtgccgcgtgag 126
           |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 53  ccgtggaggcgggcggcctcggcgtcgtaccaccacacgatccaggcgttgccgcgggag 112

                     
Query: 127 acggccggcc 136
           ||||||||||
Sbjct: 113 acggccggcc 122



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 30 cgccgccgccgtcggggaggcgctccgc 57
          ||||||||||||||| ||||||||||||
Sbjct: 7  cgccgccgccgtcggagaggcgctccgc 34
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>ref|XM_463175.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 830

 Score =  396 bits (200), Expect = e-107
 Identities = 295/326 (90%), Gaps = 2/326 (0%)
 Strand = Plus / Minus

                                                                       
Query: 172 gtcccggccgtgctgctcaccctcgccggccccgggcccggggaaggggtcgcccaccgg 231
           |||||||||||||| ||| ||||||||||| |||| |||||||| ||||| |||||||||
Sbjct: 830 gtcccggccgtgctactcgccctcgccggcgccggccccggggagggggtggcccaccgg 771

                                                                       
Query: 232 aagctccttaccaccgacaagaagcagctcgcggagatgctgaagcagtcgccctacttc 291
           |||||||| ||| |||||| ||||||||||| |||||| ||||||||||| |||||||||
Sbjct: 770 aagctcctcaccgccgacaggaagcagctcggggagattctgaagcagtccccctacttc 711

                                                                       
Query: 292 ctctccaccccggtccgcctccaggtccgcgccggcgagcgatccaccgccgtcgtgcac 351
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 ctctccacccccgtccgcctccaggtccgcgccggcgagcgatccaccgccgtcgtgcac 651

                                                                       
Query: 352 tctggcaccgtgctccccatcaaggtgcagacagatgaatcaacagggaatatattgaac 411
           || ||||| || ||||| ||||||||  | | ||| ||| ||||||| ||||||||||||
Sbjct: 650 tccggcactgtcctccctatcaaggt--atagagacgaaacaacaggaaatatattgaac 593

                                                                       
Query: 412 ttggtgatggtggaagcagatgaaggaacaatgctgaaggtgaatttgcccgtagtgttc 471
           |||||| ||||||| ||||||||||||||||||||||||||||| ||||| |||| ||||
Sbjct: 592 ttggtgctggtggaggcagatgaaggaacaatgctgaaggtgaacttgcctgtagagttc 533

                                     
Query: 472 aagggggaggatgtctgccctgngtt 497
           ||||||||||| |||||||||| |||
Sbjct: 532 aagggggaggacgtctgccctgggtt 507
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  283 bits (143), Expect = 3e-73
 Identities = 203/223 (91%)
 Strand = Plus / Minus

                                                                            
Query: 155      agcgccgcaacggcaacgtcccggccgtgctgctcaccctcgccggccccgggcccgggg 214
                ||||||||| ||||  ||||||||||||||| ||| ||||||||||| |||| |||||||
Sbjct: 22947885 agcgccgcagcggccgcgtcccggccgtgctactcgccctcgccggcgccggccccgggg 22947826

                                                                            
Query: 215      aaggggtcgcccaccggaagctccttaccaccgacaagaagcagctcgcggagatgctga 274
                | ||||| ||||||||||||||||| ||| |||||| ||||||||||| |||||| ||||
Sbjct: 22947825 agggggtggcccaccggaagctcctcaccgccgacaggaagcagctcggggagattctga 22947766

                                                                            
Query: 275      agcagtcgccctacttcctctccaccccggtccgcctccaggtccgcgccggcgagcgat 334
                ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 22947765 agcagtccccctacttcctctccacccccgtccgcctccaggtccgcgccggcgagcgat 22947706

                                                           
Query: 335      ccaccgccgtcgtgcactctggcaccgtgctccccatcaaggt 377
                ||||||||||||||||||| ||||| || ||||| ||||||||
Sbjct: 22947705 ccaccgccgtcgtgcactccggcactgtcctccctatcaaggt 22947663



 Score =  153 bits (77), Expect = 7e-34
 Identities = 112/124 (90%)
 Strand = Plus / Minus

                                                                            
Query: 374      aggtgcagacagatgaatcaacagggaatatattgaacttggtgatggtggaagcagatg 433
                ||||||| | ||| ||| ||||||| |||||||||||||||||| ||||||| |||||||
Sbjct: 22947168 aggtgcatagagacgaaacaacaggaaatatattgaacttggtgctggtggaggcagatg 22947109

                                                                            
Query: 434      aaggaacaatgctgaaggtgaatttgcccgtagtgttcaagggggaggatgtctgccctg 493
                |||||||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||
Sbjct: 22947108 aaggaacaatgctgaaggtgaacttgcctgtagagttcaagggggaggacgtctgccctg 22947049

                    
Query: 494      ngtt 497
                 |||
Sbjct: 22947048 ggtt 22947045



 Score =  115 bits (58), Expect = 1e-22
 Identities = 67/70 (95%)
 Strand = Plus / Minus

                                                                            
Query: 67       ccgtggcggcgggcggcctcggcgtcgtaccaccacacgatccaggcggtgccgcgtgag 126
                |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 22947973 ccgtggaggcgggcggcctcggcgtcgtaccaccacacgatccaggcgttgccgcgggag 22947914

                          
Query: 127      acggccggcc 136
                ||||||||||
Sbjct: 22947913 acggccggcc 22947904



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 30       cgccgccgccgtcggggaggcgctccgc 57
                ||||||||||||||| ||||||||||||
Sbjct: 22948019 cgccgccgccgtcggagaggcgctccgc 22947992



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 172      gtcccggccgtgctgctcaccctcgccggccccgg 206
                ||||| ||||||| |||||||||||||||| ||||
Sbjct: 30060006 gtccccgccgtgccgctcaccctcgccggcaccgg 30060040



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 165      cggcaacgtcccggccgtgctgctcaccctcgcc 198
                |||| ||||||||||||||| |||| ||||||||
Sbjct: 30060482 cggccacgtcccggccgtgccgctcgccctcgcc 30060449
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>gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genomic sequence, complete
              sequence
          Length = 184783

 Score =  283 bits (143), Expect = 3e-73
 Identities = 203/223 (91%)
 Strand = Plus / Minus

                                                                          
Query: 155    agcgccgcaacggcaacgtcccggccgtgctgctcaccctcgccggccccgggcccgggg 214
              ||||||||| ||||  ||||||||||||||| ||| ||||||||||| |||| |||||||
Sbjct: 150415 agcgccgcagcggccgcgtcccggccgtgctactcgccctcgccggcgccggccccgggg 150356

                                                                          
Query: 215    aaggggtcgcccaccggaagctccttaccaccgacaagaagcagctcgcggagatgctga 274
              | ||||| ||||||||||||||||| ||| |||||| ||||||||||| |||||| ||||
Sbjct: 150355 agggggtggcccaccggaagctcctcaccgccgacaggaagcagctcggggagattctga 150296

                                                                          
Query: 275    agcagtcgccctacttcctctccaccccggtccgcctccaggtccgcgccggcgagcgat 334
              ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 150295 agcagtccccctacttcctctccacccccgtccgcctccaggtccgcgccggcgagcgat 150236

                                                         
Query: 335    ccaccgccgtcgtgcactctggcaccgtgctccccatcaaggt 377
              ||||||||||||||||||| ||||| || ||||| ||||||||
Sbjct: 150235 ccaccgccgtcgtgcactccggcactgtcctccctatcaaggt 150193



 Score =  153 bits (77), Expect = 7e-34
 Identities = 112/124 (90%)
 Strand = Plus / Minus

                                                                          
Query: 374    aggtgcagacagatgaatcaacagggaatatattgaacttggtgatggtggaagcagatg 433
              ||||||| | ||| ||| ||||||| |||||||||||||||||| ||||||| |||||||
Sbjct: 149698 aggtgcatagagacgaaacaacaggaaatatattgaacttggtgctggtggaggcagatg 149639

                                                                          
Query: 434    aaggaacaatgctgaaggtgaatttgcccgtagtgttcaagggggaggatgtctgccctg 493
              |||||||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||
Sbjct: 149638 aaggaacaatgctgaaggtgaacttgcctgtagagttcaagggggaggacgtctgccctg 149579

                  
Query: 494    ngtt 497
               |||
Sbjct: 149578 ggtt 149575



 Score =  115 bits (58), Expect = 1e-22
 Identities = 67/70 (95%)
 Strand = Plus / Minus

                                                                          
Query: 67     ccgtggcggcgggcggcctcggcgtcgtaccaccacacgatccaggcggtgccgcgtgag 126
              |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 150503 ccgtggaggcgggcggcctcggcgtcgtaccaccacacgatccaggcgttgccgcgggag 150444

                        
Query: 127    acggccggcc 136
              ||||||||||
Sbjct: 150443 acggccggcc 150434



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 30     cgccgccgccgtcggggaggcgctccgc 57
              ||||||||||||||| ||||||||||||
Sbjct: 150549 cgccgccgccgtcggagaggcgctccgc 150522
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  283 bits (143), Expect = 3e-73
 Identities = 203/223 (91%)
 Strand = Plus / Minus

                                                                            
Query: 155      agcgccgcaacggcaacgtcccggccgtgctgctcaccctcgccggccccgggcccgggg 214
                ||||||||| ||||  ||||||||||||||| ||| ||||||||||| |||| |||||||
Sbjct: 22940913 agcgccgcagcggccgcgtcccggccgtgctactcgccctcgccggcgccggccccgggg 22940854

                                                                            
Query: 215      aaggggtcgcccaccggaagctccttaccaccgacaagaagcagctcgcggagatgctga 274
                | ||||| ||||||||||||||||| ||| |||||| ||||||||||| |||||| ||||
Sbjct: 22940853 agggggtggcccaccggaagctcctcaccgccgacaggaagcagctcggggagattctga 22940794

                                                                            
Query: 275      agcagtcgccctacttcctctccaccccggtccgcctccaggtccgcgccggcgagcgat 334
                ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 22940793 agcagtccccctacttcctctccacccccgtccgcctccaggtccgcgccggcgagcgat 22940734

                                                           
Query: 335      ccaccgccgtcgtgcactctggcaccgtgctccccatcaaggt 377
                ||||||||||||||||||| ||||| || ||||| ||||||||
Sbjct: 22940733 ccaccgccgtcgtgcactccggcactgtcctccctatcaaggt 22940691



 Score =  153 bits (77), Expect = 7e-34
 Identities = 112/124 (90%)
 Strand = Plus / Minus

                                                                            
Query: 374      aggtgcagacagatgaatcaacagggaatatattgaacttggtgatggtggaagcagatg 433
                ||||||| | ||| ||| ||||||| |||||||||||||||||| ||||||| |||||||
Sbjct: 22940196 aggtgcatagagacgaaacaacaggaaatatattgaacttggtgctggtggaggcagatg 22940137

                                                                            
Query: 434      aaggaacaatgctgaaggtgaatttgcccgtagtgttcaagggggaggatgtctgccctg 493
                |||||||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||
Sbjct: 22940136 aaggaacaatgctgaaggtgaacttgcctgtagagttcaagggggaggacgtctgccctg 22940077

                    
Query: 494      ngtt 497
                 |||
Sbjct: 22940076 ggtt 22940073



 Score =  115 bits (58), Expect = 1e-22
 Identities = 67/70 (95%)
 Strand = Plus / Minus

                                                                            
Query: 67       ccgtggcggcgggcggcctcggcgtcgtaccaccacacgatccaggcggtgccgcgtgag 126
                |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 22941001 ccgtggaggcgggcggcctcggcgtcgtaccaccacacgatccaggcgttgccgcgggag 22940942

                          
Query: 127      acggccggcc 136
                ||||||||||
Sbjct: 22940941 acggccggcc 22940932



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 30       cgccgccgccgtcggggaggcgctccgc 57
                ||||||||||||||| ||||||||||||
Sbjct: 22941047 cgccgccgccgtcggagaggcgctccgc 22941020



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 172      gtcccggccgtgctgctcaccctcgccggccccgg 206
                ||||| ||||||| |||||||||||||||| ||||
Sbjct: 30151428 gtccccgccgtgccgctcaccctcgccggcaccgg 30151462



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 165      cggcaacgtcccggccgtgctgctcaccctcgcc 198
                |||| ||||||||||||||| |||| ||||||||
Sbjct: 30151904 cggccacgtcccggccgtgccgctcgccctcgcc 30151871
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                     
Query: 211      ggggaaggggtcgcccaccggaagctccttaccaccgacaagaagcagctcgc 263
                ||||| |||||| ||||||| |||||||| ||| |||||| ||||||||||||
Sbjct: 20386279 ggggagggggtcacccaccgaaagctcctcaccgccgacaggaagcagctcgc 20386227



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 26       gcggcgccgccgccgtcggggagg 49
                ||||||| ||||||||||||||||
Sbjct: 30755741 gcggcgcggccgccgtcggggagg 30755718



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 21       caagggcggcgccgccgccg 40
                ||||||||||||||||||||
Sbjct: 24183390 caagggcggcgccgccgccg 24183371



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 21       caagggcggcgccgccgccg 40
                ||||||||||||||||||||
Sbjct: 23779478 caagggcggcgccgccgccg 23779497
to top
>dbj|AP005615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0006J22
          Length = 145271

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                   
Query: 211    ggggaaggggtcgcccaccggaagctccttaccaccgacaagaagcagctcgc 263
              ||||| |||||| ||||||| |||||||| ||| |||||| ||||||||||||
Sbjct: 137084 ggggagggggtcacccaccgaaagctcctcaccgccgacaggaagcagctcgc 137032
to top
>dbj|AP005771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0069D13
          Length = 157088

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 211   ggggaaggggtcgcccaccggaagctccttaccaccgacaagaagcagctcgc 263
             ||||| |||||| ||||||| |||||||| ||| |||||| ||||||||||||
Sbjct: 28703 ggggagggggtcacccaccgaaagctcctcaccgccgacaggaagcagctcgc 28651
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 172      gtcccggccgtgctgctcaccctcgccgg 200
                |||||||||||||||||| ||||||||||
Sbjct: 21697000 gtcccggccgtgctgctcgccctcgccgg 21697028
to top
>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20,
            complete sequence
          Length = 141915

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 172  gtcccggccgtgctgctcaccctcgccgg 200
            |||||||||||||||||| ||||||||||
Sbjct: 8617 gtcccggccgtgctgctcgccctcgccgg 8645
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 26       gcggcgccgccgccgtcggggagg 49
                ||||||||||||||||||||||||
Sbjct: 25960565 gcggcgccgccgccgtcggggagg 25960588
to top
>dbj|AK102183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086M14, full
           insert sequence
          Length = 3140

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 26  gcggcgccgccgccgtcggggagg 49
           ||||||||||||||||||||||||
Sbjct: 342 gcggcgccgccgccgtcggggagg 319
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 26       gcggcgccgccgccgtcggggagg 49
                ||||||||||||||||||||||||
Sbjct: 25888743 gcggcgccgccgccgtcggggagg 25888766
to top
>emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Partial sequence from BAC OJ1257_B09 of
             library Monsanto from chromosome 12 of cultivar Nipponbare
             of ssp. japonica of Oryza sativa (rice), complete sequence
          Length = 61296

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 26    gcggcgccgccgccgtcggggagg 49
             ||||||||||||||||||||||||
Sbjct: 14724 gcggcgccgccgccgtcggggagg 14701
to top
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 161806

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 26     gcggcgccgccgccgtcggggagg 49
              ||||||||||||||||||||||||
Sbjct: 151104 gcggcgccgccgccgtcggggagg 151081
to top
>ref|NM_187908.1| Oryza sativa (japonica cultivar-group), Ozsa8350 predicted mRNA
          Length = 1584

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 171 cgtcccggccgtgctgctcaccctcgccggc 201
           |||||||||||||| |||| |||||||||||
Sbjct: 640 cgtcccggccgtgccgctcgccctcgccggc 610
to top
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 177     ggccgtgctgctcaccctcgccg 199
               |||||||||||||||||||||||
Sbjct: 2096925 ggccgtgctgctcaccctcgccg 2096947
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>ref|XM_536411.2| PREDICTED: Canis familiaris similar to LIM domain binding 3,
            transcript variant 1 (LOC479269), mRNA
          Length = 2531

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 191  ccctcgccggccccgggcccggg 213
            |||||||||||||||||||||||
Sbjct: 1117 ccctcgccggccccgggcccggg 1139
to top
>ref|XM_859961.1| PREDICTED: Canis familiaris similar to LIM domain binding 3,
            transcript variant 13 (LOC479269), mRNA
          Length = 2705

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 191  ccctcgccggccccgggcccggg 213
            |||||||||||||||||||||||
Sbjct: 1291 ccctcgccggccccgggcccggg 1313
to top
>ref|XM_847022.1| PREDICTED: Canis familiaris similar to LIM domain binding 3,
            transcript variant 2 (LOC479269), mRNA
          Length = 2582

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 191  ccctcgccggccccgggcccggg 213
            |||||||||||||||||||||||
Sbjct: 1168 ccctcgccggccccgggcccggg 1190
to top
>ref|XM_859907.1| PREDICTED: Canis familiaris similar to LIM domain binding 3,
           transcript variant 11 (LOC479269), mRNA
          Length = 2003

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 191 ccctcgccggccccgggcccggg 213
           |||||||||||||||||||||||
Sbjct: 589 ccctcgccggccccgggcccggg 611
to top
>ref|XM_859755.1| PREDICTED: Canis familiaris similar to LIM domain binding 3,
            transcript variant 3 (LOC479269), mRNA
          Length = 2741

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 191  ccctcgccggccccgggcccggg 213
            |||||||||||||||||||||||
Sbjct: 1327 ccctcgccggccccgggcccggg 1349
to top
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13
          Length = 346186

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 177   ggccgtgctgctcaccctcgccg 199
             |||||||||||||||||||||||
Sbjct: 21002 ggccgtgctgctcaccctcgccg 21024
to top
>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14
          Length = 291050

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 177    ggccgtgctgctcaccctcgccg 199
              |||||||||||||||||||||||
Sbjct: 175914 ggccgtgctgctcaccctcgccg 175936
to top
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 172   gtcccggccgtgctgctcaccctcgccggccccgg 206
             ||||| ||||||| |||||||||||||||| ||||
Sbjct: 47745 gtccccgccgtgccgctcaccctcgccggcaccgg 47711



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 165   cggcaacgtcccggccgtgctgctcaccctcgcc 198
             |||| ||||||||||||||| |||| ||||||||
Sbjct: 47269 cggccacgtcccggccgtgccgctcgccctcgcc 47302
to top
>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0711E10
          Length = 157903

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 171    cgtcccggccgtgctgctcaccctcgccggc 201
              |||||||||||||| |||| |||||||||||
Sbjct: 100348 cgtcccggccgtgccgctcgccctcgccggc 100318
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 171     cgtcccggccgtgctgctcaccctcgccggc 201
               |||||||||||||| |||| |||||||||||
Sbjct: 8525195 cgtcccggccgtgccgctcgccctcgccggc 8525165



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                          
Query: 171      cgtcccggccgtgctgctcaccctcgccggccccgggcccggggaaggggtcgcccac 228
                |||||||||||||  |||| |||||||||||  ||| ||  |||| ||||||||||||
Sbjct: 10077752 cgtcccggccgtgtcgctcgccctcgccggcgtcggcccatgggagggggtcgcccac 10077695



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 25       ggcggcgccgccgccgtcgg 44
                ||||||||||||||||||||
Sbjct: 34518765 ggcggcgccgccgccgtcgg 34518746



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 24      gggcggcgccgccgccgtcg 43
               ||||||||||||||||||||
Sbjct: 2400068 gggcggcgccgccgccgtcg 2400087
to top
>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0705D01
          Length = 147174

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 171    cgtcccggccgtgctgctcaccctcgccggc 201
              |||||||||||||| |||| |||||||||||
Sbjct: 140150 cgtcccggccgtgccgctcgccctcgccggc 140120
to top
>gb|U33011.1|MTU33011 Mycobacterium tuberculosis urease structural subunits A, B and C and
            urease accessory proteins F and G genes, complete cds
          Length = 3800

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 177  ggccgtgctgctcaccctcgccg 199
            |||||||||||||||||||||||
Sbjct: 2463 ggccgtgctgctcaccctcgccg 2485
to top
>gb|L41141.1|MSGUREA Mycobacterium tuberculosis ureA, ureB and ureC genes, complete cds
          Length = 2991

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 177  ggccgtgctgctcaccctcgccg 199
            |||||||||||||||||||||||
Sbjct: 2798 ggccgtgctgctcaccctcgccg 2820
to top
>ref|XM_483431.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1350

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 19  ggcaagggcggcgccgccgccg 40
           ||||||||||||||||||||||
Sbjct: 655 ggcaagggcggcgccgccgccg 676
to top
>ref|NM_187704.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 642

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                     
Query: 171 cgtcccggccgtgctgctcaccctcgccggccccgggcccggggaaggggtcgcccac 228
           |||||||||||||  |||| |||||||||||  ||| ||  |||| ||||||||||||
Sbjct: 187 cgtcccggccgtgtcgctcgccctcgccggcgtcggcccatgggagggggtcgcccac 130
to top
>ref|XM_606959.2| PREDICTED: Bos taurus similar to Cyclin-dependent kinase 5
           activator 2 precursor (CDK5 activator 2)
           (Cyclin-dependent kinase 5 regulatory subunit 2) (P39)
           (P39I) (LOC528533), partial mRNA
          Length = 1439

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 25  ggcggcgccgccgccgtcgggg 46
           ||||||||||||||||||||||
Sbjct: 656 ggcggcgccgccgccgtcgggg 635
to top
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete
              sequence
          Length = 163972

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 165    cggcaacgtcccggccgtgctgctcaccctcgcc 198
              |||| ||||||||||||||| |||| ||||||||
Sbjct: 163563 cggccacgtcccggccgtgccgctcgccctcgcc 163596
to top
>gb|AE005955.1| Caulobacter crescentus CB15 section 281 of 359 of the complete genome
          Length = 11126

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 73   cggcgggcggcctcggcgtcgt 94
            ||||||||||||||||||||||
Sbjct: 6492 cggcgggcggcctcggcgtcgt 6471
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 19       ggcaagggcggcgccgccgccg 40
                ||||||||||||||||||||||
Sbjct: 26186199 ggcaagggcggcgccgccgccg 26186178
to top
>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0581F09
          Length = 154248

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 171   cgtcccggccgtgctgctcaccctcgccggccccgggcccggggaaggggtcgcccac 228
             |||||||||||||  |||| |||||||||||  ||| ||  |||| ||||||||||||
Sbjct: 25221 cgtcccggccgtgtcgctcgccctcgccggcgtcggcccatgggagggggtcgcccac 25164
to top
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1191_A10
          Length = 140643

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 19     ggcaagggcggcgccgccgccg 40
              ||||||||||||||||||||||
Sbjct: 130130 ggcaagggcggcgccgccgccg 130109
to top
>dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1014_E06
          Length = 112241

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 19    ggcaagggcggcgccgccgccg 40
             ||||||||||||||||||||||
Sbjct: 19124 ggcaagggcggcgccgccgccg 19103
to top
>dbj|AK120803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013B14, full
           insert sequence
          Length = 1283

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 19  ggcaagggcggcgccgccgccg 40
           ||||||||||||||||||||||
Sbjct: 849 ggcaagggcggcgccgccgccg 870
to top
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:OSJNBa0004B13
          Length = 142268

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 171  cgtcccggccgtgctgctcaccctcgccggccccgggcccggggaaggggtcgcccac 228
            |||||||||||||  |||| |||||||||||  ||| ||  |||| ||||||||||||
Sbjct: 2351 cgtcccggccgtgtcgctcgccctcgccggcgtcggcccatgggagggggtcgcccac 2294
to top
>gb|AC142244.11| Mus musculus chromosome 1, clone RP23-79H24, complete sequence
          Length = 132061

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 226   caccggaagctccttaccacc 246
             |||||||||||||||||||||
Sbjct: 47332 caccggaagctccttaccacc 47352
to top
>ref|NM_185679.1| Oryza sativa (japonica cultivar-group), Ozsa8030 predicted mRNA
          Length = 3858

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 14   tccggggcaagggcggcgccgccgccgtcgggg 46
            ||||||||||| ||||||||| ||||| |||||
Sbjct: 1124 tccggggcaagcgcggcgccggcgccgacgggg 1156
to top
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 34      gccgccgtcggggaggcgctc 54
               |||||||||||||||||||||
Sbjct: 1075032 gccgccgtcggggaggcgctc 1075052
to top
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0022E16 map C481S, complete sequence
          Length = 179668

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 181   gtgctgctcaccctcgccggccccgggcc 209
             ||||| |||| ||||||||||||||||||
Sbjct: 84470 gtgctcctcatcctcgccggccccgggcc 84442
to top
>gb|AC125780.2| Oryza sativa (japonica culitvar-group) chromosome 11 BAC clone
              OSJNBa0030I15, complete sequence
          Length = 148498

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 28     ggcgccgccgccgtcggggag 48
              |||||||||||||||||||||
Sbjct: 139726 ggcgccgccgccgtcggggag 139746
to top
>gb|AC113970.8| Mus musculus chromosome 1, clone RP23-125E16, complete sequence
          Length = 235703

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 226  caccggaagctccttaccacc 246
            |||||||||||||||||||||
Sbjct: 5714 caccggaagctccttaccacc 5694
to top
>ref|XM_843108.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0506)
           partial mRNA
          Length = 1119

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 34  gccgccgtcggggaggcgctc 54
           |||||||||||||||||||||
Sbjct: 208 gccgccgtcggggaggcgctc 228
to top
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29
          Length = 277000

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 302    cggtccgcctccaggtccgcg 322
              |||||||||||||||||||||
Sbjct: 117442 cggtccgcctccaggtccgcg 117422
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 181      gtgctgctcaccctcgccggccccgggcc 209
                ||||| |||| ||||||||||||||||||
Sbjct: 28125915 gtgctcctcatcctcgccggccccgggcc 28125887



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 28       ggcgccgccgccgtcggggag 48
                |||||||||||||||||||||
Sbjct: 24071859 ggcgccgccgccgtcggggag 24071879
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 14      tccggggcaagggcggcgccgccgccgtcgggg 46
               ||||||||||| ||||||||| ||||| |||||
Sbjct: 3780720 tccggggcaagcgcggcgccggcgccgacgggg 3780752
to top
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0015E04
          Length = 152046

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 14    tccggggcaagggcggcgccgccgccgtcgggg 46
             ||||||||||| ||||||||| ||||| |||||
Sbjct: 38674 tccggggcaagcgcggcgccggcgccgacgggg 38706
to top
>dbj|AK111279.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-G12,
          full insert sequence
          Length = 575

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 28 ggcgccgccgccgtcggggag 48
          |||||||||||||||||||||
Sbjct: 53 ggcgccgccgccgtcggggag 73
to top
>dbj|AK106678.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-A12, full
           insert sequence
          Length = 938

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 181 gtgctgctcaccctcgccggccccgggcc 209
           ||||| |||| ||||||||||||||||||
Sbjct: 804 gtgctcctcatcctcgccggccccgggcc 776
to top
>gb|AC142561.3| Didelphis virginiana clone LB3-9F6, complete sequence
          Length = 112625

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 411   cttggtgatggtggaagcaga 431
             |||||||||||||||||||||
Sbjct: 85448 cttggtgatggtggaagcaga 85468
to top
>dbj|AK099635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059J21, full
            insert sequence
          Length = 1665

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 14   tccggggcaagggcggcgccgccgccgtcgggg 46
            ||||||||||| ||||||||| ||||| |||||
Sbjct: 1060 tccggggcaagcgcggcgccggcgccgacgggg 1028
to top
>dbj|AK064281.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-G04, full
           insert sequence
          Length = 1161

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 181 gtgctgctcaccctcgccggccccgggcc 209
           ||||| |||| ||||||||||||||||||
Sbjct: 133 gtgctcctcatcctcgccggccccgggcc 161
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 65      ccccgtggcggcgggcggcctcggc 89
               ||||||||||| |||||||||||||
Sbjct: 2875360 ccccgtggcggtgggcggcctcggc 2875384
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 181      gtgctgctcaccctcgccggccccgggcc 209
                ||||| |||| ||||||||||||||||||
Sbjct: 28110793 gtgctcctcatcctcgccggccccgggcc 28110765



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 28       ggcgccgccgccgtcggggag 48
                |||||||||||||||||||||
Sbjct: 24383528 ggcgccgccgccgtcggggag 24383548
to top
>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold
          Length = 1751794

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 411    cttggtgatggtggaagcaga 431
              |||||||||||||||||||||
Sbjct: 382849 cttggtgatggtggaagcaga 382869
to top
>ref|XM_550107.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 891

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 24  gggcggcgccgccgccgtcg 43
           ||||||||||||||||||||
Sbjct: 768 gggcggcgccgccgccgtcg 749
to top
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 245    ccgacaagaagcagctcgcg 264
              ||||||||||||||||||||
Sbjct: 510675 ccgacaagaagcagctcgcg 510656
to top
>ref|XM_467671.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2168

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 26   gcggcgccgccgccgtcggggagg 49
            ||||||| ||||||||||||||||
Sbjct: 1610 gcggcgcggccgccgtcggggagg 1633
to top
>ref|XM_466699.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1038

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 21  caagggcggcgccgccgccg 40
           ||||||||||||||||||||
Sbjct: 594 caagggcggcgccgccgccg 613
to top
>ref|XM_466630.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1065

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 21  caagggcggcgccgccgccg 40
           ||||||||||||||||||||
Sbjct: 730 caagggcggcgccgccgccg 749
to top
>ref|XM_506858.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_F07.25
           mRNA
          Length = 1078

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 21  caagggcggcgccgccgccg 40
           ||||||||||||||||||||
Sbjct: 730 caagggcggcgccgccgccg 749
to top
>ref|NM_191054.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 939

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 25  ggcggcgccgccgccgtcgg 44
           ||||||||||||||||||||
Sbjct: 158 ggcggcgccgccgccgtcgg 139
to top
>gb|AY487937.1| Myxococcus xanthus hypothetical protein gene, partial cds; and
            hypothetical protein, adventurous gliding protein Z
            (aglZ), and MoxR-like ATPase (mla) genes, complete cds
          Length = 10518

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 303  ggtccgcctccaggtccgcg 322
            ||||||||||||||||||||
Sbjct: 6207 ggtccgcctccaggtccgcg 6188
to top
>gb|AC154644.2| Mus musculus BAC clone RP23-278G20 from chromosome 14, complete sequence
          Length = 175685

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 466    gtgttcaagggggaggatgt 485
              ||||||||||||||||||||
Sbjct: 151413 gtgttcaagggggaggatgt 151432
to top
>emb|Z81135.1|CEW01G7 Caenorhabditis elegans Cosmid W01G7, complete sequence
          Length = 32965

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ggcggcgccgccgccgtcgg 44
             ||||||||||||||||||||
Sbjct: 30149 ggcggcgccgccgccgtcgg 30130
to top
>gb|AY271660.1| Actinomadura madurae maduropeptin biosynthesis gene cluster, partial
             sequence
          Length = 11426

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 27    cggcgccgccgccgtcggggaggcgctc 54
             ||||||||||||| ||| ||||||||||
Sbjct: 11126 cggcgccgccgccctcgcggaggcgctc 11099
to top
>gb|AY038367.1| Human herpesvirus 2 strain KN 53690 DNA polymerase gene, complete cds
          Length = 3723

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 300  cccggtccgcctccaggtccgcgccggc 327
            |||||||||||||||||| |||| ||||
Sbjct: 2266 cccggtccgcctccaggtgcgcgacggc 2239
to top
>gb|AY038366.1| Human herpesvirus 2 strain RR 60279 DNA polymerase gene, complete cds
          Length = 3723

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 300  cccggtccgcctccaggtccgcgccggc 327
            |||||||||||||||||| |||| ||||
Sbjct: 2266 cccggtccgcctccaggtgcgcgacggc 2239
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 84      ctcggcgtcgtaccaccaca 103
               ||||||||||||||||||||
Sbjct: 3925220 ctcggcgtcgtaccaccaca 3925239
to top
>emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52), complete genome
          Length = 154746

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 300   cccggtccgcctccaggtccgcgccggc 327
             |||||||||||||||||| |||| ||||
Sbjct: 65530 cccggtccgcctccaggtgcgcgacggc 65503
to top
>emb|BX927152.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 5/10
          Length = 349799

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 257    agctcgcggagatgctgaag 276
              ||||||||||||||||||||
Sbjct: 184167 agctcgcggagatgctgaag 184148
to top
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 179    ccgtgctgctcaccctcgccggcc 202
              |||||||||||||||||| |||||
Sbjct: 103484 ccgtgctgctcaccctcgacggcc 103461
to top
>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0432B10
          Length = 131918

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ggcggcgccgccgccgtcgg 44
             ||||||||||||||||||||
Sbjct: 16059 ggcggcgccgccgccgtcgg 16040
to top
>gb|AE005745.1| Caulobacter crescentus CB15 section 71 of 359 of the complete genome
          Length = 12357

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   gcgggcggcctcggcgtcgt 94
            ||||||||||||||||||||
Sbjct: 4871 gcgggcggcctcggcgtcgt 4890
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 74      ggcgggcggcctcggcgtcg 93
               ||||||||||||||||||||
Sbjct: 2990977 ggcgggcggcctcggcgtcg 2990958
to top
>gb|AC093872.3| Homo sapiens BAC clone RP11-610P19 from 4, complete sequence
          Length = 59406

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 420   ggtggaagcagatgaaggaacaatgctg 447
             |||||| ||||||| |||||||||||||
Sbjct: 49587 ggtggaggcagatgcaggaacaatgctg 49614
to top
>gb|AC008937.7| Homo sapiens chromosome 5 clone CTD-2310F14, complete sequence
          Length = 171480

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 174    cccggccgtgctgctcaccc 193
              ||||||||||||||||||||
Sbjct: 118004 cccggccgtgctgctcaccc 118023
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 177     ggccgtgctgctcaccctcg 196
               ||||||||||||||||||||
Sbjct: 1583504 ggccgtgctgctcaccctcg 1583523
to top
>gb|AC154419.2| Mus musculus BAC clone RP24-212C1 from chromosome 14, complete sequence
          Length = 167114

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 466    gtgttcaagggggaggatgt 485
              ||||||||||||||||||||
Sbjct: 139034 gtgttcaagggggaggatgt 139015
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     ggcggcgggcggcctcggcg 90
              ||||||||||||||||||||
Sbjct: 176872 ggcggcgggcggcctcggcg 176853
to top
>ref|NM_064542.2| Caenorhabditis elegans W01G7.4 (W01G7.4) mRNA, complete cds
          Length = 844

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 25  ggcggcgccgccgccgtcgg 44
           ||||||||||||||||||||
Sbjct: 344 ggcggcgccgccgccgtcgg 325
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 30       cgccgccgccgtcggggagg 49
                ||||||||||||||||||||
Sbjct: 10347787 cgccgccgccgtcggggagg 10347768
to top
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 257     agctcgcggagatgctgaag 276
               ||||||||||||||||||||
Sbjct: 1578392 agctcgcggagatgctgaag 1578373
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 28      ggcgccgccgccgtcgggga 47
               ||||||||||||||||||||
Sbjct: 4732911 ggcgccgccgccgtcgggga 4732892
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 309     cctccaggtccgcgccggcgagcg 332
               |||||||||| |||||||||||||
Sbjct: 1116311 cctccaggtcggcgccggcgagcg 1116334
to top
>dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1104_G11
          Length = 140093

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    cgccgccgccgtcggggagg 49
             ||||||||||||||||||||
Sbjct: 55492 cgccgccgccgtcggggagg 55473
to top
>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0487D09
          Length = 161531

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    gcggcgccgccgccgtcggggagg 49
             ||||||| ||||||||||||||||
Sbjct: 95888 gcggcgcggccgccgtcggggagg 95865
to top
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 161     gcaacggcaacgtcccggcc 180
               ||||||||||||||||||||
Sbjct: 1210345 gcaacggcaacgtcccggcc 1210364
to top
>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0425G02
          Length = 155432

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ggcggcgccgccgccgtcgg 44
             ||||||||||||||||||||
Sbjct: 94484 ggcggcgccgccgccgtcgg 94465
to top
>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0024G09
          Length = 175565

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     gggcggcgccgccgccgtcg 43
              ||||||||||||||||||||
Sbjct: 129118 gggcggcgccgccgccgtcg 129137
to top
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0030C08
          Length = 163423

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   caagggcggcgccgccgccg 40
            ||||||||||||||||||||
Sbjct: 1144 caagggcggcgccgccgccg 1163
to top
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1004_A05
          Length = 174290

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     caagggcggcgccgccgccg 40
              ||||||||||||||||||||
Sbjct: 142131 caagggcggcgccgccgccg 142112
to top
>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1058_F07
          Length = 95841

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    caagggcggcgccgccgccg 40
             ||||||||||||||||||||
Sbjct: 90062 caagggcggcgccgccgccg 90081
to top
>dbj|AK107118.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-B02, full
           insert sequence
          Length = 1367

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 25  ggcggcgccgccgccgtcgg 44
           ||||||||||||||||||||
Sbjct: 345 ggcggcgccgccgccgtcgg 326
to top
>dbj|AK104293.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G06, full
           insert sequence
          Length = 1065

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 21  caagggcggcgccgccgccg 40
           ||||||||||||||||||||
Sbjct: 730 caagggcggcgccgccgccg 749
to top
>dbj|AK099700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075C24, full
            insert sequence
          Length = 2167

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 26   gcggcgccgccgccgtcggggagg 49
            ||||||| ||||||||||||||||
Sbjct: 1610 gcggcgcggccgccgtcggggagg 1633
to top
>gb|AC006021.2|AC006021 Homo sapiens PAC clone RP5-1129L24 from 7q32-q34, complete sequence
          Length = 98240

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 370   atcaaggtgcagacagatga 389
             ||||||||||||||||||||
Sbjct: 33356 atcaaggtgcagacagatga 33375
to top
>gb|BT024140.1| Zea mays clone EL01N0442G04 mRNA sequence
          Length = 1482

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 27  cggcgccgccgccgtcgggg 46
           ||||||||||||||||||||
Sbjct: 212 cggcgccgccgccgtcgggg 193
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>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   cctcgccggccccgggcccg 211
             ||||||||||||||||||||
Sbjct: 87203 cctcgccggccccgggcccg 87222
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>dbj|AK061044.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-E01, full
           insert sequence
          Length = 1078

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 21  caagggcggcgccgccgccg 40
           ||||||||||||||||||||
Sbjct: 730 caagggcggcgccgccgccg 749
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>emb|CT025694.11| Mouse DNA sequence from clone RP24-66N5 on chromosome 14, complete
              sequence
          Length = 203022

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 466    gtgttcaagggggaggatgt 485
              ||||||||||||||||||||
Sbjct: 167224 gtgttcaagggggaggatgt 167243
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>emb|CR761112.2| Xenopus tropicalis finished cDNA, clone TEgg072j10
          Length = 877

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 197 ccggccccgggcccggggaa 216
           ||||||||||||||||||||
Sbjct: 28  ccggccccgggcccggggaa 9
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>gb|U08864.1|PDU08864 Paracoccus denitrificans phosphate acetyltransferase (pta) gene,
           complete cds, and insertion sequence IS1248a, complete
           sequence
          Length = 2215

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 71  ggcggcgggcggcctcggcg 90
           ||||||||||||||||||||
Sbjct: 243 ggcggcgggcggcctcggcg 224
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 68      cgtggcggcgggcggcctcg 87
               ||||||||||||||||||||
Sbjct: 1848190 cgtggcggcgggcggcctcg 1848209
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>gb|M14793.1|HS2POLD Herpes simplex virus type 2 (strain 186) DNA polymerase gene
          Length = 1147

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 300  cccggtccgcctccaggtccgcgccggc 327
            |||||||||||||||||| |||| ||||
Sbjct: 1021 cccggtccgcctccaggtgcgcgacggc 994
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>gb|M16321.1|HS2POL HSV-2 DNA polymerase gene, complete cds
          Length = 4003

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 300  cccggtccgcctccaggtccgcgccggc 327
            |||||||||||||||||| |||| ||||
Sbjct: 2500 cccggtccgcctccaggtgcgcgacggc 2473
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>dbj|AB001885.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger
           protein, complete cds, clone:R1577
          Length = 1197

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 21  caagggcggcgccgccgccg 40
           ||||||||||||||||||||
Sbjct: 725 caagggcggcgccgccgccg 744


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,947,349
Number of Sequences: 3902068
Number of extensions: 3947349
Number of successful extensions: 102480
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97708
Number of HSP's gapped (non-prelim): 4771
length of query: 499
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 477
effective length of database: 17,147,199,772
effective search space: 8179214291244
effective search space used: 8179214291244
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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