Clone Name | bart55c12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | BTBD4_HUMAN (Q86UZ6) BTB/POZ domain-containing protein 4 (Zinc f... | 33 | 0.72 | 2 | CEZ2_HUMAN (Q8TE49) Zinc finger A20 domain-containing protein ? ... | 32 | 0.94 | 3 | WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interactin... | 30 | 4.6 | 4 | WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting ... | 29 | 7.9 |
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>BTBD4_HUMAN (Q86UZ6) BTB/POZ domain-containing protein 4 (Zinc finger protein| 340) Length = 589 Score = 32.7 bits (73), Expect = 0.72 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = -3 Query: 548 SKASTPDPIFLVDSAWPFFTRSSN 477 S+AS+P P FL S WPF +R SN Sbjct: 290 SRASSPVPSFLPTSGWPFSSRDSN 313
>CEZ2_HUMAN (Q8TE49) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)| (Zinc finger protein Cezanne 2) (OTU domain-containing protein 7) Length = 926 Score = 32.3 bits (72), Expect = 0.94 Identities = 18/41 (43%), Positives = 22/41 (53%) Frame = -1 Query: 493 SPGPPIPSARTY*TRGSATTCGAARRNSRTCPRPWRTPSAP 371 SPGP A G+A+ G ARR S + P P R+P AP Sbjct: 726 SPGPAAGRAARAAAGGTASPGGGARRASASGPVPGRSPPAP 766
>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 493 Score = 30.0 bits (66), Expect = 4.6 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = -1 Query: 502 GLSSPGPPIPSARTY*TRGSATTCGAARRNSRTCPRPWRTPSAP 371 GL +P PP P RG+A G+AR+N P+ P P Sbjct: 207 GLGAPRPPFPG-----NRGAAFGAGSARQNPSGSSSPFPRPPLP 245
>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 487 Score = 29.3 bits (64), Expect = 7.9 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -1 Query: 502 GLSSPGPPIPSARTY*TRGSATTCGAARRNSRTCPRPWRTPSAP 371 GL +P PP P RG+A G+ R+N + P+ P P Sbjct: 202 GLGAPRPPFPG-----NRGAAFGAGSVRQNLSSSSSPFPRPPLP 240 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.134 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,509,148 Number of Sequences: 219361 Number of extensions: 522243 Number of successful extensions: 1482 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1457 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1481 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4585734400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)