ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart55c12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK059827.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-G11, full insert sequence Length = 1010 Score = 151 bits (76), Expect = 3e-33 Identities = 157/184 (85%) Strand = Plus / Plus Query: 379 aaggagttcgccacggccgtggacatgttcgactatttcttcgcgctgctccacacgtgg 438 |||||||||||||||| ||| || ||||||||||| |||||||| ||||||||| ||||| Sbjct: 333 aaggagttcgccacgggcgtcgagatgttcgactacttcttcgccctgctccactcgtgg 392 Query: 439 tcgctgaacctcgagttcaataagtacgagcagatggtattggaggacctggtgaagaaa 498 ||| | | |||||| |||| ||||| ||||| ||||| ||||| |||||| |||||||| Sbjct: 393 gcgccgcagctcgagatcaacaagtatgagcatatggtgttggaagacctgctgaagaaa 452 Query: 499 ggccatgctgagtccactaagaagattggatcaggcgtggatgcctttgagatccgcaac 558 ||||||||||||||| || ||| |||||| |||| | || || ||||||||||||||| Sbjct: 453 ggccatgctgagtccgataggaaaattggagcaggaattgaagcatttgagatccgcaac 512 Query: 559 cacc 562 |||| Sbjct: 513 cacc 516 Score = 56.0 bits (28), Expect = 1e-04 Identities = 69/82 (84%), Gaps = 3/82 (3%) Strand = Plus / Plus Query: 211 gaggagggggacgaccccgccgccggggctgcggccgaggaggcggaggagg---cgccg 267 ||||||||||| ||| |||||||||| ||||| | ||||||||||| ||||| | || Sbjct: 156 gaggagggggatgactccgccgccggcgctgctggcgaggaggcggcggagggagctgcg 215 Query: 268 gccaagaaggcgaaggtggagg 289 ||||||||| ||||||||||| Sbjct: 216 gccaagaagcagaaggtggagg 237
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 461 agtacgagcagatggtattggaggacctggtgaagaaaggccatgctgagtccactaaga 520 |||| ||||| ||||| ||||| |||||| ||||||||||||||||||||||| || || Sbjct: 4529043 agtatgagcatatggtgttggaagacctgctgaagaaaggccatgctgagtccgatagga 4529102 Query: 521 agattggatcaggcgtggatgcctttgagatccgcaaccacc 562 | |||||| |||| | || || ||||||||||||||||||| Sbjct: 4529103 aaattggagcaggaattgaagcatttgagatccgcaaccacc 4529144 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 379 aaggagttcgccacggccgtggacatgttcgactatttcttcgcgctgctccacacgtgg 438 |||||||||||||||| ||| || ||||||||||| |||||||| ||||||||| ||||| Sbjct: 4527309 aaggagttcgccacgggcgtcgagatgttcgactacttcttcgccctgctccactcgtgg 4527368 Score = 56.0 bits (28), Expect = 1e-04 Identities = 69/82 (84%), Gaps = 3/82 (3%) Strand = Plus / Plus Query: 211 gaggagggggacgaccccgccgccggggctgcggccgaggaggcggaggagg---cgccg 267 ||||||||||| ||| |||||||||| ||||| | ||||||||||| ||||| | || Sbjct: 4527132 gaggagggggatgactccgccgccggcgctgctggcgaggaggcggcggagggagctgcg 4527191 Query: 268 gccaagaaggcgaaggtggagg 289 ||||||||| ||||||||||| Sbjct: 4527192 gccaagaagcagaaggtggagg 4527213 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 26930661 gaggaggctgaggaggcgccggcc 26930638 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgaggaggcggaggaggcgc 265 |||||||||||||||||||| Sbjct: 12735136 cgaggaggcggaggaggcgc 12735117 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 1249090 gaggaggccgaggaggcgccggcc 1249067 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 675605 gaggaggccgaggaggcgccggcc 675582
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 461 agtacgagcagatggtattggaggacctggtgaagaaaggccatgctgagtccactaaga 520 |||| ||||| ||||| ||||| |||||| ||||||||||||||||||||||| || || Sbjct: 4529158 agtatgagcatatggtgttggaagacctgctgaagaaaggccatgctgagtccgatagga 4529217 Query: 521 agattggatcaggcgtggatgcctttgagatccgcaaccacc 562 | |||||| |||| | || || ||||||||||||||||||| Sbjct: 4529218 aaattggagcaggaattgaagcatttgagatccgcaaccacc 4529259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 379 aaggagttcgccacggccgtggacatgttcgactatttcttcgcgctgctccacacgtgg 438 |||||||||||||||| ||| || ||||||||||| |||||||| ||||||||| ||||| Sbjct: 4527424 aaggagttcgccacgggcgtcgagatgttcgactacttcttcgccctgctccactcgtgg 4527483 Score = 56.0 bits (28), Expect = 1e-04 Identities = 69/82 (84%), Gaps = 3/82 (3%) Strand = Plus / Plus Query: 211 gaggagggggacgaccccgccgccggggctgcggccgaggaggcggaggagg---cgccg 267 ||||||||||| ||| |||||||||| ||||| | ||||||||||| ||||| | || Sbjct: 4527247 gaggagggggatgactccgccgccggcgctgctggcgaggaggcggcggagggagctgcg 4527306 Query: 268 gccaagaaggcgaaggtggagg 289 ||||||||| ||||||||||| Sbjct: 4527307 gccaagaagcagaaggtggagg 4527328 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 27021984 gaggaggctgaggaggcgccggcc 27021961 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgaggaggcggaggaggcgc 265 |||||||||||||||||||| Sbjct: 12731899 cgaggaggcggaggaggcgc 12731880 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 1249088 gaggaggccgaggaggcgccggcc 1249065 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 675603 gaggaggccgaggaggcgccggcc 675580
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 461 agtacgagcagatggtattggaggacctggtgaagaaaggccatgctgagtccactaaga 520 |||| ||||| ||||| ||||| |||||| ||||||||||||||||||||||| || || Sbjct: 134335 agtatgagcatatggtgttggaagacctgctgaagaaaggccatgctgagtccgatagga 134394 Query: 521 agattggatcaggcgtggatgcctttgagatccgcaaccacc 562 | |||||| |||| | || || ||||||||||||||||||| Sbjct: 134395 aaattggagcaggaattgaagcatttgagatccgcaaccacc 134436 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 379 aaggagttcgccacggccgtggacatgttcgactatttcttcgcgctgctccacacgtgg 438 |||||||||||||||| ||| || ||||||||||| |||||||| ||||||||| ||||| Sbjct: 132601 aaggagttcgccacgggcgtcgagatgttcgactacttcttcgccctgctccactcgtgg 132660 Score = 56.0 bits (28), Expect = 1e-04 Identities = 69/82 (84%), Gaps = 3/82 (3%) Strand = Plus / Plus Query: 211 gaggagggggacgaccccgccgccggggctgcggccgaggaggcggaggagg---cgccg 267 ||||||||||| ||| |||||||||| ||||| | ||||||||||| ||||| | || Sbjct: 132424 gaggagggggatgactccgccgccggcgctgctggcgaggaggcggcggagggagctgcg 132483 Query: 268 gccaagaaggcgaaggtggagg 289 ||||||||| ||||||||||| Sbjct: 132484 gccaagaagcagaaggtggagg 132505
>ref|XM_539204.2| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 1 (LOC482083), mRNA Length = 15160 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 241 gcggccgaggaggcggaggaggcgc 265 ||||||||||||||||||||||||| Sbjct: 6682 gcggccgaggaggcggaggaggcgc 6706
>ref|XM_852242.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 8 (LOC482083), mRNA Length = 14734 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 241 gcggccgaggaggcggaggaggcgc 265 ||||||||||||||||||||||||| Sbjct: 6256 gcggccgaggaggcggaggaggcgc 6280
>ref|XM_852201.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 7 (LOC482083), mRNA Length = 14734 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 241 gcggccgaggaggcggaggaggcgc 265 ||||||||||||||||||||||||| Sbjct: 6256 gcggccgaggaggcggaggaggcgc 6280
>ref|XM_852160.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 6 (LOC482083), mRNA Length = 15175 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 241 gcggccgaggaggcggaggaggcgc 265 ||||||||||||||||||||||||| Sbjct: 6697 gcggccgaggaggcggaggaggcgc 6721
>ref|XM_852120.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 5 (LOC482083), mRNA Length = 14749 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 241 gcggccgaggaggcggaggaggcgc 265 ||||||||||||||||||||||||| Sbjct: 6271 gcggccgaggaggcggaggaggcgc 6295
>ref|XM_852074.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 4 (LOC482083), mRNA Length = 14863 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 241 gcggccgaggaggcggaggaggcgc 265 ||||||||||||||||||||||||| Sbjct: 6385 gcggccgaggaggcggaggaggcgc 6409
>ref|XM_843706.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 2 (LOC482083), mRNA Length = 14812 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 241 gcggccgaggaggcggaggaggcgc 265 ||||||||||||||||||||||||| Sbjct: 6334 gcggccgaggaggcggaggaggcgc 6358
>gb|AC008735.9| Homo sapiens chromosome 19 clone CTD-2537I9, complete sequence Length = 223879 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 243 ggccgaggaggcggaggaggcgccg 267 ||||||||||||||||||||||||| Sbjct: 70641 ggccgaggaggcggaggaggcgccg 70665
>ref|XM_747538.1| Aspergillus fumigatus Af293 Hsp70 chaperone Hsp88 (Afu1g12610) partial mRNA Length = 2145 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 280 aaggtggaggaagaggcgaagaaggcggagga 311 |||| |||||||||||| |||||||||||||| Sbjct: 2032 aaggcggaggaagaggccaagaaggcggagga 2063
>emb|BX649606.1| Aspergillus fumigatus BAC pilot project supercontig; segment 2/3 Length = 348551 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 280 aaggtggaggaagaggcgaagaaggcggagga 311 |||| |||||||||||| |||||||||||||| Sbjct: 31639 aaggcggaggaagaggccaagaaggcggagga 31670
>gb|AY111521.1| Zea mays CL31447_1 mRNA sequence Length = 658 Score = 48.1 bits (24), Expect = 0.031 Identities = 90/112 (80%) Strand = Plus / Minus Query: 451 gagttcaataagtacgagcagatggtattggaggacctggtgaagaaaggccatgctgag 510 |||||||||||||| || || ||||| ||||||| || ||||||||||||| || || Sbjct: 503 gagttcaataagtatgaacaaatggtgctggaggatttgctgaagaaaggccacgcggaa 444 Query: 511 tccactaagaagattggatcaggcgtggatgcctttgagatccgcaaccacc 562 | ||||||||||||| |||| || || || || ||||| |||||||||| Sbjct: 443 cctgctaagaagattggggcaggagtcgaagcattcgagatacgcaaccacc 392
>ref|XM_463583.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2052 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 cgaggaggcggaggaggcgccg 267 |||||||||||||||||||||| Sbjct: 1944 cgaggaggcggaggaggcgccg 1923
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 143 cggccgccgcagccgcggccat 164 |||||||||||||||||||||| Sbjct: 2245389 cggccgccgcagccgcggccat 2245410 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 gtggcggccgccgcagccgcggcc 162 |||||||||||||||||| ||||| Sbjct: 1766155 gtggcggccgccgcagccccggcc 1766178
>ref|XM_867980.1| PREDICTED: Bos taurus hypothetical protein LOC616017 (LOC616017), mRNA Length = 3022 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 539 atgcctttgagatccgcaacca 560 |||||||||||||||||||||| Sbjct: 647 atgcctttgagatccgcaacca 668
>emb|Z98742.5|HS128O3 Human DNA sequence from clone RP1-128O3 on chromosome 6q21-22 Contains the 5' end of the SNX3 gene for sorting nexin 3, a pseudogene similar to hypothetical protein HSPC016, a novel gene, and the 5' end of the LACE1 gene for lactation elevated 1 a ribosomal protein L36a pseudogene (RPL36A) and four CpG islands, complete sequence Length = 119350 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 234 cggggctgcggccgaggaggcg 255 |||||||||||||||||||||| Sbjct: 62640 cggggctgcggccgaggaggcg 62619
>gb|AC092954.4| Homo sapiens 3 BAC RP11-368I23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166452 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 282 ggtggaggaagaggcgaagaaggcggagga 311 |||||||||||||| |||||||| |||||| Sbjct: 141490 ggtggaggaagaggagaagaaggaggagga 141519
>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0497A05 Length = 130919 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 cgaggaggcggaggaggcgccg 267 |||||||||||||||||||||| Sbjct: 74787 cgaggaggcggaggaggcgccg 74766
>dbj|AB244276.1| Oryza sativa (japonica cultivar-group) PLA2 mRNA for PLASTOCHRON2, complete cds Length = 2052 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 cgaggaggcggaggaggcgccg 267 |||||||||||||||||||||| Sbjct: 1944 cgaggaggcggaggaggcgccg 1923
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 cgaggaggcggaggaggcgccg 267 |||||||||||||||||||||| Sbjct: 39520345 cgaggaggcggaggaggcgccg 39520324 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tgcggccgaggaggcggagg 259 |||||||||||||||||||| Sbjct: 33855579 tgcggccgaggaggcggagg 33855560 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 23563873 gaggaggccgaggaggcgccggcc 23563850 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 20096673 gaggaggccgaggaggcgccggcc 20096650 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 20072771 gaggaggccgaggaggcgccggcc 20072748 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 18301975 gaggaggccgaggaggcgccggcc 18301952 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 13450791 gaggaggccgaggaggcgccggcc 13450768 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 11297288 gaggaggccgaggaggcgccggcc 11297265
>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456E05 Length = 173699 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 cgaggaggcggaggaggcgccg 267 |||||||||||||||||||||| Sbjct: 1301 cgaggaggcggaggaggcgccg 1280
>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1417F08 Length = 155536 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 cgaggaggcggaggaggcgccg 267 |||||||||||||||||||||| Sbjct: 95359 cgaggaggcggaggaggcgccg 95338
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 121 gccatggccgagcccgaggtggcggccgcc 150 ||||||||||| |||||||||| ||||||| Sbjct: 1378569 gccatggccgaccccgaggtggaggccgcc 1378598
>gb|U82827.1|HSU82827 Human transcription factor HOXA13 (HOXA13) gene, complete cds Length = 2014 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 141 ggcggccgccgcagccgcggcc 162 |||||||||||||||||||||| Sbjct: 354 ggcggccgccgcagccgcggcc 333
>gb|AC100500.10| Mus musculus chromosome 3, clone RP23-143I10, complete sequence Length = 179369 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gcggccgccgcagccgcggcc 162 ||||||||||||||||||||| Sbjct: 105372 gcggccgccgcagccgcggcc 105392
>ref|XM_514387.1| PREDICTED: Pan troglodytes similar to KIAA1337 protein (LOC457949), mRNA Length = 2920 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 gcctttgagatccgcaaccac 561 ||||||||||||||||||||| Sbjct: 319 gcctttgagatccgcaaccac 339
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggcg 264 ||||||||||||||||||||| Sbjct: 1061681 gccgaggaggcggaggaggcg 1061701
>gb|AY548484.1| Frog virus 3, complete genome Length = 105903 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ggccgccgcagccgcggccat 164 ||||||||||||||||||||| Sbjct: 39736 ggccgccgcagccgcggccat 39756
>gb|BC053007.1| Mus musculus basic helix-loop-helix domain containing, class B5, mRNA (cDNA clone MGC:62191 IMAGE:5686844), complete cds Length = 3207 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 gcggccgccgcagccgcggcc 162 ||||||||||||||||||||| Sbjct: 1380 gcggccgccgcagccgcggcc 1360
>gb|AC148455.2| Xenopus tropicalis clone CH216-165I8, complete sequence Length = 170350 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 501 ccatgctgagtccactaagaa 521 ||||||||||||||||||||| Sbjct: 1591 ccatgctgagtccactaagaa 1571
>ref|XM_985961.1| PREDICTED: Mus musculus patched domain containing 2 (Ptchd2), mRNA Length = 8707 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 gcctttgagatccgcaaccac 561 ||||||||||||||||||||| Sbjct: 547 gcctttgagatccgcaaccac 567
>ref|XM_905292.2| PREDICTED: Mus musculus patched domain containing 2 (Ptchd2), mRNA Length = 8643 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 gcctttgagatccgcaaccac 561 ||||||||||||||||||||| Sbjct: 532 gcctttgagatccgcaaccac 552
>ref|XM_620145.3| PREDICTED: Mus musculus patched domain containing 2, transcript variant 1 (Ptchd2), mRNA Length = 8719 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 gcctttgagatccgcaaccac 561 ||||||||||||||||||||| Sbjct: 547 gcctttgagatccgcaaccac 567
>ref|XM_894941.2| PREDICTED: Mus musculus patched domain containing 2, transcript variant 2 (Ptchd2), mRNA Length = 8689 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 gcctttgagatccgcaaccac 561 ||||||||||||||||||||| Sbjct: 547 gcctttgagatccgcaaccac 567
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 gagttcgccacggccgtggac 402 ||||||||||||||||||||| Sbjct: 1517207 gagttcgccacggccgtggac 1517227
>ref|XM_838268.1| Leishmania major strain Friedlin cytochrome p450 reductase (LMJ_1185) partial mRNA Length = 2496 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggcg 264 ||||||||||||||||||||| Sbjct: 1594 gccgaggaggcggaggaggcg 1614
>gb|AC018545.14| Homo sapiens 3 BAC RP11-145F16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170359 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 101 ccctcccacgcccacccccagccatggcc 129 ||||||||| |||||||||||||| |||| Sbjct: 100939 ccctcccactcccacccccagccaaggcc 100967
>ref|XM_541407.2| PREDICTED: Canis familiaris similar to Flt3 interacting zinc finger protein 1 (LOC484292), mRNA Length = 4233 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 243 ggccgaggaggcggaggaggcgccg 267 ||||||||||||||||||| ||||| Sbjct: 2574 ggccgaggaggcggaggagacgccg 2598
>gb|BC070441.1| Mus musculus patched domain containing 2, transcript variant 3, mRNA (cDNA clone MGC:99871 IMAGE:30535318), complete cds Length = 5174 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 gcctttgagatccgcaaccac 561 ||||||||||||||||||||| Sbjct: 479 gcctttgagatccgcaaccac 499
>emb|AL590989.15| Human DNA sequence from clone RP11-149P14 on chromosome 1 Contains a pseudogene similar to part of cytochrome b, the 5' end of a novel gene and a CpG island, complete sequence Length = 110121 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 gcctttgagatccgcaaccac 561 ||||||||||||||||||||| Sbjct: 108912 gcctttgagatccgcaaccac 108932
>gb|AC158762.4| Mus musculus chromosome 1, clone RP24-255O19, complete sequence Length = 176468 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 279 gaaggtggaggaagaggcgaagaaggcggagga 311 ||||| ||||||||||| |||||||| |||||| Sbjct: 93255 gaaggaggaggaagaggagaagaaggaggagga 93223
>emb|BX000345.4|CNS08CDB Oryza sativa chromosome 12, . BAC OSJNBb0111J10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128678 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 gccaccctcccacgcccaccc 117 ||||||||||||||||||||| Sbjct: 11445 gccaccctcccacgcccaccc 11465
>ref|XM_938154.1| PREDICTED: Homo sapiens patched domain containing 2 (PTCHD2), mRNA Length = 5652 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 gcctttgagatccgcaaccac 561 ||||||||||||||||||||| Sbjct: 901 gcctttgagatccgcaaccac 921
>ref|XM_052561.8| PREDICTED: Homo sapiens patched domain containing 2 (PTCHD2), mRNA Length = 5649 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 gcctttgagatccgcaaccac 561 ||||||||||||||||||||| Sbjct: 898 gcctttgagatccgcaaccac 918
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggcg 264 ||||||||||||||||||||| Sbjct: 1862097 gccgaggaggcggaggaggcg 1862117
>gb|BC036355.1| Homo sapiens TSC22 domain family, member 2, mRNA (cDNA clone IMAGE:5170441) Length = 1596 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 101 ccctcccacgcccacccccagccatggcc 129 ||||||||| |||||||||||||| |||| Sbjct: 751 ccctcccactcccacccccagccaaggcc 723
>dbj|AK047201.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930035F16 product:basic helix-loop-helix domain containing, class B5, full insert sequence Length = 2596 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 gcggccgccgcagccgcggcc 162 ||||||||||||||||||||| Sbjct: 1114 gcggccgccgcagccgcggcc 1094
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 249 ggaggcggaggaggcgccggccaag 273 |||||||||||||||| |||||||| Sbjct: 4016122 ggaggcggaggaggcggcggccaag 4016098
>dbj|AK090326.1| Mus musculus 16 days neonate male diencephalon cDNA, RIKEN full-length enriched library, clone:G630052C06 product:hypothetical protein, full insert sequence Length = 5042 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 gcctttgagatccgcaaccac 561 ||||||||||||||||||||| Sbjct: 531 gcctttgagatccgcaaccac 551
>dbj|AK076228.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:4122401N01 product:BETA3 [Mus musculus], full insert sequence Length = 3108 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 gcggccgccgcagccgcggcc 162 ||||||||||||||||||||| Sbjct: 1304 gcggccgccgcagccgcggcc 1284
>gb|BC072569.1| Mus musculus patched domain containing 2, mRNA (cDNA clone MGC:99434 IMAGE:5719275), complete cds Length = 4939 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 gcctttgagatccgcaaccac 561 ||||||||||||||||||||| Sbjct: 512 gcctttgagatccgcaaccac 532
>ref|NM_021560.2| Mus musculus basic helix-loop-helix domain containing, class B5 (Bhlhb5), mRNA Length = 3108 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 gcggccgccgcagccgcggcc 162 ||||||||||||||||||||| Sbjct: 1304 gcggccgccgcagccgcggcc 1284
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 gccaccctcccacgcccaccc 117 ||||||||||||||||||||| Sbjct: 6246169 gccaccctcccacgcccaccc 6246149
>gb|AC084651.1|CBRG45O05 Caenorhabditis briggsae cosmid G45O05, complete sequence Length = 35608 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 270 caagaaggcgaaggtggaggaagag 294 |||| |||||||||||||||||||| Sbjct: 30964 caaggaggcgaaggtggaggaagag 30988
>gb|AC010281.4|AC010281 Homo sapiens chromosome 5 clone CTC-553B9, complete sequence Length = 160378 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 279 gaaggtggaggaagaggcgaagaaggcggagga 311 ||||| ||||||||||| |||||||| |||||| Sbjct: 13501 gaagggggaggaagaggagaagaaggaggagga 13469
>ref|XM_233671.3| PREDICTED: Rattus norvegicus similar to KIAA1337 protein (predicted) (LOC313705), mRNA Length = 5050 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 gcctttgagatccgcaaccac 561 ||||||||||||||||||||| Sbjct: 541 gcctttgagatccgcaaccac 561
>dbj|AB014569.1| Homo sapiens mRNA for KIAA0669 protein, partial cds Length = 4550 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 101 ccctcccacgcccacccccagccatggcc 129 ||||||||| |||||||||||||| |||| Sbjct: 595 ccctcccactcccacccccagccaaggcc 623
>gb|AF218865.1|AF218865 Mus musculus BETA3 mRNA, complete cds Length = 2827 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 gcggccgccgcagccgcggcc 162 ||||||||||||||||||||| Sbjct: 1002 gcggccgccgcagccgcggcc 982
>gb|AF083097.1|AF083097 Monodelphis domestica transcription factor HOXA13 (HOXA13) gene, partial cds Length = 640 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 gccgccgcagccgcggccatggaga 169 ||||||||||||||||||| ||||| Sbjct: 167 gccgccgcagccgcggccacggaga 143
>gb|AC110042.12| Mus musculus chromosome 1, clone RP23-278C6, complete sequence Length = 170602 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 279 gaaggtggaggaagaggcgaagaaggcggagga 311 ||||| ||||||||||| |||||||| |||||| Sbjct: 142558 gaaggaggaggaagaggagaagaaggaggagga 142526
>gb|AC174765.1| Gasterosteus aculeatus clone VMRC28-42K03, complete sequence Length = 143816 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 141 ggcggccgccgcagccgcggccatg 165 |||||||||||| |||||||||||| Sbjct: 62731 ggcggccgccgcggccgcggccatg 62707
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 gccaccctcccacgcccaccc 117 ||||||||||||||||||||| Sbjct: 6246044 gccaccctcccacgcccaccc 6246024
>emb|AL831805.4|CNS08CAI Oryza sativa chromosome 12, . BAC OSJNBa0085J02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 166508 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 gccaccctcccacgcccaccc 117 ||||||||||||||||||||| Sbjct: 93103 gccaccctcccacgcccaccc 93123
>emb|CT009653.2| Medicago truncatula chromosome 5 clone mth2-173o18, COMPLETE SEQUENCE Length = 115799 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 caagaaggcgaaggtggagga 290 ||||||||||||||||||||| Sbjct: 45008 caagaaggcgaaggtggagga 44988
>gb|AF389451.1| Tiger frog virus, complete genome Length = 105057 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ggccgccgcagccgcggccat 164 ||||||||||||||||||||| Sbjct: 38336 ggccgccgcagccgcggccat 38356
>emb|AL845161.5| Mouse DNA sequence from clone RP23-214I20 on chromosome 2, complete sequence Length = 233212 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 aagaaggcgaaggtggaggaagagg 295 ||||||| ||||||||||||||||| Sbjct: 202104 aagaaggtgaaggtggaggaagagg 202128 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 272 agaaggcgaaggtggaggaagaggcgaagaaggcggagga 311 |||||| |||||||||||| |||| | |||||| |||||| Sbjct: 202144 agaaggtgaaggtggaggaggaggaggagaaggaggagga 202183
>emb|AL606919.12| Mouse DNA sequence from clone RP23-264F10 on chromosome 4, complete sequence Length = 187816 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 gcctttgagatccgcaaccac 561 ||||||||||||||||||||| Sbjct: 26957 gcctttgagatccgcaaccac 26937
>dbj|AB037758.1| Homo sapiens mRNA for KIAA1337 protein, partial cds Length = 5181 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 gcctttgagatccgcaaccac 561 ||||||||||||||||||||| Sbjct: 457 gcctttgagatccgcaaccac 477
>gb|AC161120.5| Mus musculus BAC clone RP23-84A2 from chromosome 10, complete sequence Length = 214638 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 cctcccacgcccacccccagccat 125 ||||||| |||||||||||||||| Sbjct: 181307 cctcccaagcccacccccagccat 181330
>ref|XM_480874.1| Oryza sativa (japonica cultivar-group), mRNA Length = 276 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 218 gaggaggccgaggaggcgccggcc 241
>ref|XM_471840.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 846 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtggcggccgccgcagccgcggcc 162 |||||||||||||||| ||||||| Sbjct: 354 gtggcggccgccgcagacgcggcc 331
>ref|XM_468466.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1310 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgaggaggcggaggaggcgc 265 |||||||||||||||||||| Sbjct: 317 cgaggaggcggaggaggcgc 298
>gb|AC145364.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062D09, complete sequence Length = 160244 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 135048 gaggaggccgaggaggcgccggcc 135025
>gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0045D11 map near 50283S, complete sequence Length = 148306 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 42195 gaggaggccgaggaggcgccggcc 42218
>ref|XM_359597.1| Magnaporthe grisea 70-15 hypothetical protein (MG05180.4) partial mRNA Length = 1023 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 gaagaaggcggaggacgtcgcggc 320 ||||||||| |||||||||||||| Sbjct: 843 gaagaaggccgaggacgtcgcggc 866
>ref|XM_418941.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ20330 (LOC420852), mRNA Length = 554 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cggccgaggaggcggaggag 261 |||||||||||||||||||| Sbjct: 114 cggccgaggaggcggaggag 133
>gb|AC135916.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0088M06, from chromosome 5, complete sequence Length = 150099 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 44439 gaggaggccgaggaggcgccggcc 44416
>ref|XM_953405.1| Neurospora crassa OR74A hypothetical protein (NCU09279.1) partial mRNA Length = 1572 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggaggcggaggaggcgccgg 268 |||||||||||||||||||| Sbjct: 846 ggaggcggaggaggcgccgg 827
>ref|XM_331970.1| Neurospora crassa OR74A hypothetical protein (NCU09279.1) partial mRNA Length = 1572 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggaggcggaggaggcgccgg 268 |||||||||||||||||||| Sbjct: 846 ggaggcggaggaggcgccgg 827
>ref|NM_201387.1| Mus musculus plectin 1 (Plec1), transcript variant 4, mRNA Length = 14944 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6377 gccgaggaggcggaggaggc 6396
>ref|NM_201389.1| Mus musculus plectin 1 (Plec1), transcript variant 6, mRNA Length = 15438 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6871 gccgaggaggcggaggaggc 6890
>ref|NM_201393.1| Mus musculus plectin 1 (Plec1), transcript variant 10, mRNA Length = 14944 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6377 gccgaggaggcggaggaggc 6396
>ref|NM_201386.1| Mus musculus plectin 1 (Plec1), transcript variant 3, mRNA Length = 14915 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6348 gccgaggaggcggaggaggc 6367
>ref|NM_201388.1| Mus musculus plectin 1 (Plec1), transcript variant 5, mRNA Length = 14906 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6339 gccgaggaggcggaggaggc 6358
>ref|NM_201392.1| Mus musculus plectin 1 (Plec1), transcript variant 9, mRNA Length = 14827 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6260 gccgaggaggcggaggaggc 6279
>ref|NM_201394.1| Mus musculus plectin 1 (Plec1), transcript variant 11, mRNA Length = 15001 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6434 gccgaggaggcggaggaggc 6453
>ref|NM_201385.1| Mus musculus plectin 1 (Plec1), transcript variant 2, mRNA Length = 14854 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6287 gccgaggaggcggaggaggc 6306
>ref|NM_201390.1| Mus musculus plectin 1 (Plec1), transcript variant 7, mRNA Length = 14853 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6286 gccgaggaggcggaggaggc 6305
>ref|NM_201391.1| Mus musculus plectin 1 (Plec1), transcript variant 8, mRNA Length = 15001 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6434 gccgaggaggcggaggaggc 6453
>ref|NM_011117.1| Mus musculus plectin 1 (Plec1), transcript variant 1, mRNA Length = 14919 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6352 gccgaggaggcggaggaggc 6371
>gb|AY576676.1| Oryza sativa (japonica cultivar-group) membrane binding protein (MBP) mRNA, complete cds Length = 1255 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtggcggccgccgcagccgcggcc 162 |||||||||||||||| ||||||| Sbjct: 365 gtggcggccgccgcagacgcggcc 342
>gb|AC159999.6| Mus musculus BAC clone RP23-6P9 from chromosome 10, complete sequence Length = 216489 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 cctcccacgcccacccccagccat 125 ||||||| |||||||||||||||| Sbjct: 15907 cctcccaagcccacccccagccat 15930
>ref|XM_994758.1| PREDICTED: Mus musculus plectin 1 (Plec1), mRNA Length = 14982 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6725 gccgaggaggcggaggaggc 6744
>gb|AY480043.1| Mus musculus plectin 11 mRNA, complete cds Length = 15001 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6434 gccgaggaggcggaggaggc 6453
>gb|AY480042.1| Mus musculus plectin 10 mRNA, complete cds Length = 14944 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6377 gccgaggaggcggaggaggc 6396
>gb|AY480041.1| Mus musculus plectin 9 mRNA, complete cds Length = 14827 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6260 gccgaggaggcggaggaggc 6279
>gb|AY480040.1| Mus musculus plectin 8 mRNA, complete cds Length = 15001 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6434 gccgaggaggcggaggaggc 6453
>gb|AY480039.1| Mus musculus plectin 7 mRNA, complete cds Length = 14853 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6286 gccgaggaggcggaggaggc 6305
>gb|AY480038.1| Mus musculus plectin 6 mRNA, complete cds Length = 15438 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6871 gccgaggaggcggaggaggc 6890
>gb|AY480037.1| Mus musculus plectin 5 mRNA, complete cds Length = 14906 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6339 gccgaggaggcggaggaggc 6358
>gb|AY480036.1| Mus musculus plectin 4 mRNA, complete cds Length = 14944 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6377 gccgaggaggcggaggaggc 6396
>gb|AY480035.1| Mus musculus plectin 3 mRNA, complete cds Length = 14915 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6348 gccgaggaggcggaggaggc 6367
>gb|AY480034.1| Mus musculus plectin 2 mRNA, complete cds Length = 14854 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6287 gccgaggaggcggaggaggc 6306
>gb|AY480033.1| Mus musculus plectin 1 mRNA, complete cds Length = 14919 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 6352 gccgaggaggcggaggaggc 6371
>ref|XM_542784.2| PREDICTED: Canis familiaris similar to ubiquitin-activating enzyme E1-domain containing 1 isoform 1 (LOC485664), mRNA Length = 1437 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cccagccatggccgagcccg 136 |||||||||||||||||||| Sbjct: 162 cccagccatggccgagcccg 181
>ref|XM_808213.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509053.20) partial mRNA Length = 2145 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgaggaggcggaggaggcgc 265 |||||||||||||||||||| Sbjct: 1302 cgaggaggcggaggaggcgc 1321
>ref|XM_815155.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509965.340) partial mRNA Length = 2145 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgaggaggcggaggaggcgc 265 |||||||||||||||||||| Sbjct: 1302 cgaggaggcggaggaggcgc 1321
>ref|XM_537227.2| PREDICTED: Canis familiaris similar to saccharopine dehydrogenase (putative) (LOC480105), mRNA Length = 1678 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 ggcggccgccgcagccgcggccat 164 |||||||||||||||||| ||||| Sbjct: 24 ggcggccgccgcagccgccgccat 1
>ref|XM_863626.1| PREDICTED: Canis familiaris hypothetical protein LOC612325 (LOC612325), mRNA Length = 2285 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 ggccaccctcccacgcccaccccc 119 |||||||||||||| ||||||||| Sbjct: 504 ggccaccctcccacccccaccccc 481
>gb|AC017000.5| Homo sapiens BAC clone RP11-42B7 from 7, complete sequence Length = 154844 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 gccgccggggctgcggccgaggag 252 |||||||||||||||||| ||||| Sbjct: 84402 gccgccggggctgcggcccaggag 84379
>ref|XM_544533.2| PREDICTED: Canis familiaris similar to paired box gene 7 isoform 2 (LOC487408), mRNA Length = 1860 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 ggcggccgccgcagccgcgg 160 |||||||||||||||||||| Sbjct: 1407 ggcggccgccgcagccgcgg 1426
>gb|AC167227.1| Oryza sativa (japonica cultivar-group) chromosome unknown clone OSJNBb0026K11, complete sequence Length = 129643 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 12199 gaggaggccgaggaggcgccggcc 12176
>emb|AL445470.5| Human DNA sequence from clone RP11-421L10 on chromosome 1 Contains a novel gene, complete sequence Length = 86332 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 285 ggaggaagaggcgaagaaggcggaggac 312 ||||||||||| |||||||| ||||||| Sbjct: 2026 ggaggaagaggagaagaaggaggaggac 1999
>ref|XM_504828.1| Yarrowia lipolytica CLIB122, YALI0F00638g predicted mRNA Length = 1272 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 gcggccgaggaggcggagga 260 |||||||||||||||||||| Sbjct: 926 gcggccgaggaggcggagga 907
>emb|AL353637.21| Human DNA sequence from clone RP11-159H20 on chromosome 9q21.12-21.32 Contains a DnaJ (Hsp40) homolog subfamily B member 5 (DNAJB5) pseudogene, a lysophospholipase II (LYPLA2) pseudogene, an eukaryotic translation initiation factor 3 subunit 1 35kDa (EIF3S1) pseudogene, the gene (possible pseudogene) for a novel protein similar to forkhead box B1 (FOXB1), ATP synthase H+ transporting mitochondrial F0 complex subunit f isoform 2 (ATP5J2) pseudogene and three CpG islands, complete sequence Length = 146466 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 471 gatggtattggaggacctggtgaa 494 |||||||||||||| ||||||||| Sbjct: 50161 gatggtattggaggccctggtgaa 50138
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 109661 gaggaggctgaggaggcgccggcc 109638
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggccgccgcagccgcggcca 163 |||||||||||||||||||| Sbjct: 183946 ggccgccgcagccgcggcca 183927
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 ggcgccggccaagaaggcgaaggt 284 ||||| |||||||||||||||||| Sbjct: 261441 ggcgcgggccaagaaggcgaaggt 261418
>emb|AL663005.3|OSJN00208 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062H02, complete sequence Length = 166747 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 gtggcggccgccgcagccgcggcc 162 |||||||||||||||| ||||||| Sbjct: 64149 gtggcggccgccgcagacgcggcc 64172
>emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0054B09, complete sequence Length = 146506 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 82292 gaggaggccgaggaggcgccggcc 82315
>emb|AL606660.3|OSJN00111 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085C12, complete sequence Length = 122721 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 65714 gaggaggccgaggaggcgccggcc 65737
>emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24, complete sequence Length = 127506 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 235 ggggctgcggccgaggaggcggaggagg 262 ||||| ||||| |||||||||||||||| Sbjct: 33884 ggggcggcggcggaggaggcggaggagg 33857
>emb|AL806526.4| Mouse DNA sequence from clone RP23-123F24 on chromosome 11 Contains a novel gene and a ribosomal protein S20 (Rps20) pseudogene, complete sequence Length = 128168 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 271 aagaaggcgaaggtggaggaagaggcgaagaaggcggagg 310 ||||||| ||||| ||||||||||| | |||||| ||||| Sbjct: 65195 aagaaggagaaggaggaggaagaggaggagaagggggagg 65234
>gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0009H09, complete sequence Length = 148740 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 52354 gaggaggccgaggaggcgccggcc 52331
>gb|AY049712.1| Mus musculus ik3-2 mRNA, complete cds Length = 1897 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 ccgccgcagccgcggccatg 165 |||||||||||||||||||| Sbjct: 203 ccgccgcagccgcggccatg 184
>gb|AC074355.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0071I20, complete sequence Length = 145510 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 aggaggcgccggccaagaag 276 |||||||||||||||||||| Sbjct: 95497 aggaggcgccggccaagaag 95516
>gb|AC087114.7| Mus musculus Strain C57BL6/J Chromosome 10 RP23-309M23, complete sequence Length = 185825 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 cctcccacgcccacccccagccat 125 ||||||| |||||||||||||||| Sbjct: 172202 cctcccaagcccacccccagccat 172225
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 caagaaggcgaaggtggagg 289 |||||||||||||||||||| Sbjct: 1198182 caagaaggcgaaggtggagg 1198201
>dbj|AK133937.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730541C20 product:Iroquois related homeobox 1 (Drosophila), full insert sequence Length = 2060 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 135 cgaggtggcggccgccgcagccgcggcc 162 ||||| ||||||||| |||||||||||| Sbjct: 352 cgaggcggcggccgcagcagccgcggcc 325
>emb|CR386366.1| Gallus gallus finished cDNA, clone ChEST938k13 Length = 558 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cggccgaggaggcggaggag 261 |||||||||||||||||||| Sbjct: 117 cggccgaggaggcggaggag 136
>ref|NM_001021343.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC1709.02c), partial mRNA Length = 2943 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 266 cggccaagaaggcgaaggtggagg 289 |||||||||||||||||| ||||| Sbjct: 143 cggccaagaaggcgaaggaggagg 166
>dbj|AK050121.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730018E24 product:similar to CDK3-BINDING PROTEIN IK3-1 [Mus musculus], full insert sequence Length = 4228 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 ccgccgcagccgcggccatg 165 |||||||||||||||||||| Sbjct: 28 ccgccgcagccgcggccatg 9
>gb|AF246703.2| Synthetic construct minitransposon TnHB100 sequence Length = 21376 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 agcccgaggtggcggccgcc 150 |||||||||||||||||||| Sbjct: 17727 agcccgaggtggcggccgcc 17746
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 31650897 gaggaggccgaggaggcgccggcc 31650920 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 235 ggggctgcggccgaggaggcggaggagg 262 ||||| ||||| |||||||||||||||| Sbjct: 27765216 ggggcggcggcggaggaggcggaggagg 27765189 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 gtggcggccgccgcagccgcggcc 162 |||||||||||||||| ||||||| Sbjct: 14907411 gtggcggccgccgcagacgcggcc 14907434 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 gtggcggccgccgcagccgcggcc 162 |||||||||||||||| ||||||| Sbjct: 14497398 gtggcggccgccgcagacgcggcc 14497421 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 14244527 gaggaggccgaggaggcgccggcc 14244550 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 873025 gaggaggccgaggaggcgccggcc 873002
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 13909358 gaggaggccgaggaggcgccggcc 13909381 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 8464523 gaggaggccgaggaggcgccggcc 8464546
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 aggaggcgccggccaagaag 276 |||||||||||||||||||| Sbjct: 4548134 aggaggcgccggccaagaag 4548153
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 10506369 gaggaggccgaggaggcgccggcc 10506346
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cgccgcagccgcggccatgg 166 |||||||||||||||||||| Sbjct: 16536127 cgccgcagccgcggccatgg 16536108 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 16530174 gaggaggccgaggaggcgccggcc 16530151 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 8376600 gaggaggccgaggaggcgccggcc 8376577
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 26778673 gaggaggccgaggaggcgccggcc 26778650 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 cggccgccgcagccgcggccatgg 166 |||||||||| ||||||||||||| Sbjct: 21240579 cggccgccgcggccgcggccatgg 21240556 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 12669916 gaggaggccgaggaggcgccggcc 12669939
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 20543881 gaggaggccgaggaggcgccggcc 20543904
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 23226948 gaggaggccgaggaggcgccggcc 23226925 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 9535756 gaggaggccgaggaggcgccggcc 9535733
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 aagaaggcgaaggtggaggaagag 294 ||||||||||||| |||||||||| Sbjct: 35446065 aagaaggcgaaggaggaggaagag 35446042 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgaggaggcggaggaggcgc 265 |||||||||||||||||||| Sbjct: 35389320 cgaggaggcggaggaggcgc 35389301 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 18382600 gaggaggccgaggaggcgccggcc 18382577
>emb|AL606992.3|OSJN00116 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L13, complete sequence Length = 143386 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 93686 gaggaggccgaggaggcgccggcc 93663
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgaggaggcggaggaggcgc 265 |||||||||||||||||||| Sbjct: 89589 cgaggaggcggaggaggcgc 89570
>dbj|AP004232.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0051H17 Length = 187471 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 3051 gaggaggccgaggaggcgccggcc 3028
>dbj|AP004233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0065J17 Length = 139014 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 94635 gaggaggccgaggaggcgccggcc 94612 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 70733 gaggaggccgaggaggcgccggcc 70710
>dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045F02 Length = 215378 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 4751 gaggaggccgaggaggcgccggcc 4728
>dbj|AP003337.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1111_G12 Length = 112664 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 95344 gaggaggccgaggaggcgccggcc 95321
>ref|NM_145851.1| Mus musculus Cdk5 and Abl enzyme substrate 2 (Cables2), mRNA Length = 1897 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 ccgccgcagccgcggccatg 165 |||||||||||||||||||| Sbjct: 203 ccgccgcagccgcggccatg 184
>gb|AC004952.2|AC004952 Homo sapiens PAC clone RP5-1032D7 from 7p22, complete sequence Length = 137057 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 gccgccggggctgcggccgaggag 252 |||||||||||||||||| ||||| Sbjct: 57161 gccgccggggctgcggcccaggag 57184
>ref|XM_573810.1| PREDICTED: Rattus norvegicus similar to collapsin response mediator protein-2A (LOC498539), mRNA Length = 773 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 cacccccagccatggccgag 132 |||||||||||||||||||| Sbjct: 4 cacccccagccatggccgag 23
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 tgctccacacgtggtcgctg 444 |||||||||||||||||||| Sbjct: 2905126 tgctccacacgtggtcgctg 2905145
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 gcggccgaggaggcggaggaggcg 264 |||||||| ||||||||||||||| Sbjct: 875536 gcggccgacgaggcggaggaggcg 875559
>gb|AF220562.1|AF220562 Mus musculus disabled 2 (Dab2) gene, promoter region Length = 1000 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 241 gcggccgaggaggcggaggaggcgccgg 268 |||| |||||||||| |||||||||||| Sbjct: 706 gcgggcgaggaggcgcaggaggcgccgg 733
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 61486 gaggaggccgaggaggcgccggcc 61463
>gb|U86454.3|RSU86454 Rhodobacter sphaeroides hook length control protein FliK (flik) gene, complete cds Length = 2297 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 gtggcggccgccgcagccgcggcc 162 |||||||||||||||||| ||||| Sbjct: 1404 gtggcggccgccgcagccccggcc 1427
>gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1126B12, complete sequence Length = 146241 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 53992 gaggaggccgaggaggcgccggcc 53969
>dbj|AP005810.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0696F12 Length = 165227 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 cggccgccgcagccgcggccatgg 166 |||||||||| ||||||||||||| Sbjct: 161940 cggccgccgcggccgcggccatgg 161917
>dbj|AP003562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1108H10 Length = 136357 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 59309 gaggaggccgaggaggcgccggcc 59286
>dbj|AP005678.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_F08 Length = 133805 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 73974 gaggaggccgaggaggcgccggcc 73951
>dbj|AP005704.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0448B03 Length = 147748 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 106748 gaggaggccgaggaggcgccggcc 106725
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 ccgccgccggggctgcggcc 246 |||||||||||||||||||| Sbjct: 6068240 ccgccgccggggctgcggcc 6068221
>gb|AF165984.1|AF165984 Mus musculus iroquois-class homeobox protein Irx1 (Irx1) mRNA, complete cds Length = 1443 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 135 cgaggtggcggccgccgcagccgcggcc 162 ||||| ||||||||| |||||||||||| Sbjct: 117 cgaggcggcggccgcagcagccgcggcc 90
>dbj|AP003293.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0691E06 Length = 166497 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tgcggccgaggaggcggagg 259 |||||||||||||||||||| Sbjct: 94626 tgcggccgaggaggcggagg 94607
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 26572 gaggaggccgaggaggcgccggcc 26549
>dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0659D09 Length = 168253 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 116176 gaggaggccgaggaggcgccggcc 116199
>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025A05 Length = 154298 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 127178 gaggaggccgaggaggcgccggcc 127155
>dbj|AP002873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0552C05 Length = 136586 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 10873 gaggaggccgaggaggcgccggcc 10850
>dbj|AP002871.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0475H04 Length = 143337 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 84693 gaggaggccgaggaggcgccggcc 84670
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 125530 gaggaggccgaggaggcgccggcc 125507
>dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0492E07 Length = 143794 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 44386 gaggaggccgaggaggcgccggcc 44409
>dbj|AP003832.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1458_B07 Length = 99415 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 24847 gaggaggccgaggaggcgccggcc 24824
>dbj|AP005786.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0458H05 Length = 136299 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 cggccgccgcagccgcggccatgg 166 |||||||||| ||||||||||||| Sbjct: 26864 cggccgccgcggccgcggccatgg 26841
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 aagaaggcgaaggtggaggaagag 294 ||||||||||||| |||||||||| Sbjct: 57586 aagaaggcgaaggaggaggaagag 57563 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgaggaggcggaggaggcgc 265 |||||||||||||||||||| Sbjct: 841 cgaggaggcggaggaggcgc 822
>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0001A11 Length = 153252 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 45524 gaggaggccgaggaggcgccggcc 45501
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgaggaggcggaggaggcgc 265 |||||||||||||||||||| Sbjct: 49868 cgaggaggcggaggaggcgc 49849
>emb|AJ306945.1|OAM306945 Odontophrynus americanus 4n partial ribosomal IGS, clone pOA4Sp230-5 Length = 226 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ggggctgcggccgaggaggc 254 |||||||||||||||||||| Sbjct: 160 ggggctgcggccgaggaggc 141
>emb|AJ306943.1|OAM306943 Odontophrynus americanus 4n partial ribosomal IGS, clone pOA4Sp230-3 Length = 228 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ggggctgcggccgaggaggc 254 |||||||||||||||||||| Sbjct: 162 ggggctgcggccgaggaggc 143
>emb|AJ306942.1|OAM306942 Odontophrynus americanus 4n partial ribosomal IGS, clone pOA4Sp230-2 Length = 228 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ggggctgcggccgaggaggc 254 |||||||||||||||||||| Sbjct: 162 ggggctgcggccgaggaggc 143
>emb|AJ306941.1|OAM306941 Odontophrynus americanus 4n partial ribosomal IGS, clone pOA4Sp230-1 Length = 228 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ggggctgcggccgaggaggc 254 |||||||||||||||||||| Sbjct: 162 ggggctgcggccgaggaggc 143
>dbj|AK105029.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-F05, full insert sequence Length = 1295 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgaggaggcggaggaggcgc 265 |||||||||||||||||||| Sbjct: 313 cgaggaggcggaggaggcgc 294
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 116709 gaggaggccgaggaggcgccggcc 116686
>dbj|AP005628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_E02 Length = 159669 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cgccgcagccgcggccatgg 166 |||||||||||||||||||| Sbjct: 7951 cgccgcagccgcggccatgg 7932 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 1998 gaggaggccgaggaggcgccggcc 1975
>dbj|AP005523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0488B06 Length = 154764 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cgccgcagccgcggccatgg 166 |||||||||||||||||||| Sbjct: 146783 cgccgcagccgcggccatgg 146764 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 140830 gaggaggccgaggaggcgccggcc 140807
>dbj|AK120749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004O13, full insert sequence Length = 1829 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 235 ggggctgcggccgaggaggcggaggagg 262 ||||| ||||| |||||||||||||||| Sbjct: 43 ggggcggcggcggaggaggcggaggagg 16
>emb|Z36982.1|RLHOXHYP R.leguminosarum hoxX and hypE genes Length = 2878 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 agcccgaggtggcggccgcc 150 |||||||||||||||||||| Sbjct: 838 agcccgaggtggcggccgcc 857
>dbj|AK110444.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-D10, full insert sequence Length = 2786 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 gaagaaggcggaggacgtcg 316 |||||||||||||||||||| Sbjct: 1347 gaagaaggcggaggacgtcg 1366
>gb|AC102338.10| Mus musculus chromosome 3, clone RP24-559D1, complete sequence Length = 176047 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cccacgcccacccccagcca 124 |||||||||||||||||||| Sbjct: 152551 cccacgcccacccccagcca 152532
>dbj|AK101071.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024A09, full insert sequence Length = 1884 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 235 ggggctgcggccgaggaggcggaggagg 262 ||||| ||||| |||||||||||||||| Sbjct: 37 ggggcggcggcggaggaggcggaggagg 10
>dbj|AK066109.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N06, full insert sequence Length = 2109 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 235 ggggctgcggccgaggaggcggaggagg 262 ||||| ||||| |||||||||||||||| Sbjct: 43 ggggcggcggcggaggaggcggaggagg 16
>emb|X52974.1|RLHUPGENE R.leguminosarum bv. viciae UPM791 hydrogenase cluster Length = 17786 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 agcccgaggtggcggccgcc 150 |||||||||||||||||||| Sbjct: 14344 agcccgaggtggcggccgcc 14363
>gb|AC138528.8| Mus musculus chromosome 3, clone RP23-329L9, complete sequence Length = 188290 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cccacgcccacccccagcca 124 |||||||||||||||||||| Sbjct: 184059 cccacgcccacccccagcca 184078
>gb|AC110211.16| Mus musculus chromosome 15, clone RP23-192B21, complete sequence Length = 202844 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gccgaggaggcggaggaggc 263 |||||||||||||||||||| Sbjct: 109226 gccgaggaggcggaggaggc 109207
>gb|AC171501.2| Mus musculus BAC clone RP23-255N3 from chromosome 6, complete sequence Length = 170938 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 98 ccaccctcccacgcccacccccagccat 125 ||||||||| || ||||||||||||||| Sbjct: 36538 ccaccctccaacccccacccccagccat 36565
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 aggaggcgccggccaagaag 276 |||||||||||||||||||| Sbjct: 4548955 aggaggcgccggccaagaag 4548974
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 13991360 gaggaggccgaggaggcgccggcc 13991383 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gaggaggcggaggaggcgccggcc 270 |||||||| ||||||||||||||| Sbjct: 8535286 gaggaggccgaggaggcgccggcc 8535309
>ref|NM_010573.1| Mus musculus Iroquois related homeobox 1 (Drosophila) (Irx1), mRNA Length = 1443 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 135 cgaggtggcggccgccgcagccgcggcc 162 ||||| ||||||||| |||||||||||| Sbjct: 117 cgaggcggcggccgcagcagccgcggcc 90
>gb|AC131686.4| Mus musculus BAC clone RP23-375H15 from 3, complete sequence Length = 179353 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 gcggccgaggaggcggaggaggcg 264 ||||| |||||||||||||||||| Sbjct: 126001 gcggcggaggaggcggaggaggcg 126024
>emb|CT009684.7| Mouse DNA sequence from clone RP23-127L21 on chromosome 13, complete sequence Length = 205067 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 135 cgaggtggcggccgccgcagccgcggcc 162 ||||| ||||||||| |||||||||||| Sbjct: 35597 cgaggcggcggccgcagcagccgcggcc 35624
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gcggccgaggaggcggagga 260 |||||||||||||||||||| Sbjct: 101135 gcggccgaggaggcggagga 101154
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gacgaccccgccgccggggc 239 |||||||||||||||||||| Sbjct: 1426504 gacgaccccgccgccggggc 1426485
>emb|AL844546.8| Mouse DNA sequence from clone RP23-243I3 on chromosome 2, complete sequence Length = 170475 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ccctcccacgcccaccccca 120 |||||||||||||||||||| Sbjct: 21803 ccctcccacgcccaccccca 21784
>emb|AL663027.9| Mouse DNA sequence from clone RP23-16P3 on chromosome 2, complete sequence Length = 219778 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 ccgccgcagccgcggccatg 165 |||||||||||||||||||| Sbjct: 144355 ccgccgcagccgcggccatg 144374
>emb|X64393.1|OCDAG43 O.cuniculus mRNA for dystroglycan Length = 4200 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 cgtggatgcctttgagatcc 553 |||||||||||||||||||| Sbjct: 1930 cgtggatgcctttgagatcc 1949 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,617,129 Number of Sequences: 3902068 Number of extensions: 3617129 Number of successful extensions: 102795 Number of sequences better than 10.0: 207 Number of HSP's better than 10.0 without gapping: 225 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98674 Number of HSP's gapped (non-prelim): 4120 length of query: 562 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 539 effective length of database: 17,143,297,704 effective search space: 9240237462456 effective search space used: 9240237462456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
