ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart55c06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_471943.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1056 Score = 486 bits (245), Expect = e-134 Identities = 410/465 (88%) Strand = Plus / Plus Query: 106 tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 165 ||||||||||||| ||||| ||||||||||||||||||| || || |||||||| |||| Sbjct: 41 tgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggatgcatgggcatgt 100 Query: 166 ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccacgccg 225 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 101 ccgccttctacggcccgcccaagccggagcccgacatggtggcgctcatccaccacgccg 160 Query: 226 tcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacgaga 285 ||||||||||||||||||| |||||| ||||||| ||||| || || |||||||||||| Sbjct: 161 tcgccgccggcgtcaccctcctcgacacctccgacatctacggcccccacaccaacgagc 220 Query: 286 tcctcctcggcaaggcgctgctagggggcgtgagggagagggtagagctggccaccaagt 345 ||||||||||||||||||||| || |||||| | || | ||| |||||||||||||||| Sbjct: 221 tcctcctcggcaaggcgctgcagggcggcgtgcgtgataaggttgagctggccaccaagt 280 Query: 346 tcggcatctctttcgccgacggcaagcgggaggttcgcggggatccggcctacgtgcggg 405 |||||||| | |||| |||||||||||||| || |||||||| ||||| |||||||| | Sbjct: 281 tcggcatcgcgttcgaagacggcaagcgggacgtccgcggggacccggcgtacgtgcgcg 340 Query: 406 cggcgtgcgagggcagcctcaagcggctcggcgtcagctgcattgacctttactaccagc 465 |||||||||||||||||||| ||||||||||||| | |||| |||||||||||||||| Sbjct: 341 cggcgtgcgagggcagcctccggcggctcggcgtcgacagcatcgacctttactaccagc 400 Query: 466 accgcgtcgacaccagggtgcctatcgaggtcacggtgggggaactcaagaagcttgtcg 525 |||| ||||||| | |||||| |||||||||||| | || ||||||||||| || || | Sbjct: 401 accgtgtcgacaagaaggtgcccatcgaggtcacgattggcgaactcaagaaactagttg 460 Query: 526 aagaaggaaaaataaaatacatcggattacctgaagcatctgcat 570 |||||||||| |||||||| || || ||| ||||||||||||||| Sbjct: 461 aagaaggaaagataaaatatattgggttatctgaagcatctgcat 505
>dbj|AK099774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095E15, full insert sequence Length = 1374 Score = 486 bits (245), Expect = e-134 Identities = 410/465 (88%) Strand = Plus / Plus Query: 106 tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 165 ||||||||||||| ||||| ||||||||||||||||||| || || |||||||| |||| Sbjct: 77 tgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggatgcatgggcatgt 136 Query: 166 ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccacgccg 225 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 137 ccgccttctacggcccgcccaagccggagcccgacatggtggcgctcatccaccacgccg 196 Query: 226 tcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacgaga 285 ||||||||||||||||||| |||||| ||||||| ||||| || || |||||||||||| Sbjct: 197 tcgccgccggcgtcaccctcctcgacacctccgacatctacggcccccacaccaacgagc 256 Query: 286 tcctcctcggcaaggcgctgctagggggcgtgagggagagggtagagctggccaccaagt 345 ||||||||||||||||||||| || |||||| | || | ||| |||||||||||||||| Sbjct: 257 tcctcctcggcaaggcgctgcagggcggcgtgcgtgataaggttgagctggccaccaagt 316 Query: 346 tcggcatctctttcgccgacggcaagcgggaggttcgcggggatccggcctacgtgcggg 405 |||||||| | |||| |||||||||||||| || |||||||| ||||| |||||||| | Sbjct: 317 tcggcatcgcgttcgaagacggcaagcgggacgtccgcggggacccggcgtacgtgcgcg 376 Query: 406 cggcgtgcgagggcagcctcaagcggctcggcgtcagctgcattgacctttactaccagc 465 |||||||||||||||||||| ||||||||||||| | |||| |||||||||||||||| Sbjct: 377 cggcgtgcgagggcagcctccggcggctcggcgtcgacagcatcgacctttactaccagc 436 Query: 466 accgcgtcgacaccagggtgcctatcgaggtcacggtgggggaactcaagaagcttgtcg 525 |||| ||||||| | |||||| |||||||||||| | || ||||||||||| || || | Sbjct: 437 accgtgtcgacaagaaggtgcccatcgaggtcacgattggcgaactcaagaaactagttg 496 Query: 526 aagaaggaaaaataaaatacatcggattacctgaagcatctgcat 570 |||||||||| |||||||| || || ||| ||||||||||||||| Sbjct: 497 aagaaggaaagataaaatatattgggttatctgaagcatctgcat 541
>dbj|AK061686.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B01, full insert sequence Length = 1366 Score = 486 bits (245), Expect = e-134 Identities = 410/465 (88%) Strand = Plus / Plus Query: 106 tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 165 ||||||||||||| ||||| ||||||||||||||||||| || || |||||||| |||| Sbjct: 76 tgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggatgcatgggcatgt 135 Query: 166 ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccacgccg 225 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 136 ccgccttctacggcccgcccaagccggagcccgacatggtggcgctcatccaccacgccg 195 Query: 226 tcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacgaga 285 ||||||||||||||||||| |||||| ||||||| ||||| || || |||||||||||| Sbjct: 196 tcgccgccggcgtcaccctcctcgacacctccgacatctacggcccccacaccaacgagc 255 Query: 286 tcctcctcggcaaggcgctgctagggggcgtgagggagagggtagagctggccaccaagt 345 ||||||||||||||||||||| || |||||| | || | ||| |||||||||||||||| Sbjct: 256 tcctcctcggcaaggcgctgcagggcggcgtgcgtgataaggttgagctggccaccaagt 315 Query: 346 tcggcatctctttcgccgacggcaagcgggaggttcgcggggatccggcctacgtgcggg 405 |||||||| | |||| |||||||||||||| || |||||||| ||||| |||||||| | Sbjct: 316 tcggcatcgcgttcgaagacggcaagcgggacgtccgcggggacccggcgtacgtgcgcg 375 Query: 406 cggcgtgcgagggcagcctcaagcggctcggcgtcagctgcattgacctttactaccagc 465 |||||||||||||||||||| ||||||||||||| | |||| |||||||||||||||| Sbjct: 376 cggcgtgcgagggcagcctccggcggctcggcgtcgacagcatcgacctttactaccagc 435 Query: 466 accgcgtcgacaccagggtgcctatcgaggtcacggtgggggaactcaagaagcttgtcg 525 |||| ||||||| | |||||| |||||||||||| | || ||||||||||| || || | Sbjct: 436 accgtgtcgacaagaaggtgcccatcgaggtcacgattggcgaactcaagaaactagttg 495 Query: 526 aagaaggaaaaataaaatacatcggattacctgaagcatctgcat 570 |||||||||| |||||||| || || ||| ||||||||||||||| Sbjct: 496 aagaaggaaagataaaatatattgggttatctgaagcatctgcat 540
>ref|XM_471940.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1038 Score = 347 bits (175), Expect = 2e-92 Identities = 405/480 (84%), Gaps = 5/480 (1%) Strand = Plus / Plus Query: 95 ggtgccacgcgtgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctg 154 |||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 15 ggtgccgcgggtgaagctgggctctcaggggatggaggtctcggcgcaggggctcggctg 74 Query: 155 catgggtatgtccgccttctacggcccgcccaagccggagccagacatggtcgcgctcat 214 |||||| |||| | | || || ||||||||||||||| | |||||||| |||||||| Sbjct: 75 catgggcatgtgcccggccttcgagccgcccaagccggaggccgacatggtggcgctcat 134 Query: 215 ccaccacgccgtcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgca 274 || ||||||| |||||||||||||||| | ||||| ||||||| |||| || || || Sbjct: 135 ccgccacgccatcgccgccggcgtcacgttcttcgacacctccgacctctacggccccca 194 Query: 275 caccaacgagatcctcctcggcaaggcgctgctaggg----ggcgtgagggagagggtag 330 |||||||||| ||||||||||||||||||||| |||| |||||| | || ||||| | Sbjct: 195 caccaacgaggtcctcctcggcaaggcgctgc-agggcggcggcgtgcgcgacagggttg 253 Query: 331 agctggccaccaagttcggcatctctttcgccgacggcaagcgggaggttcgcggggatc 390 ||||||||||||||||||||| | ||||||| |||||||| || | | ||||| || | Sbjct: 254 agctggccaccaagttcggcaagttcttcgccggcggcaagccggggatccgcggcgacc 313 Query: 391 cggcctacgtgcgggcggcgtgcgagggcagcctcaagcggctcggcgtcagctgcattg 450 |||| |||||||| ||||||||||||||||||||| ||||||||||||| ||||| | Sbjct: 314 cggcgtacgtgcgcgcggcgtgcgagggcagcctccggcggctcggcgtcgattgcatcg 373 Query: 451 acctttactaccagcaccgcgtcgacaccagggtgcctatcgaggtcacggtgggggaac 510 ||||||||||||||||||||||||||| | |||||| |||||||||||| | || |||| Sbjct: 374 acctttactaccagcaccgcgtcgacaagaaggtgcccatcgaggtcacgattggtgaac 433 Query: 511 tcaagaagcttgtcgaagaaggaaaaataaaatacatcggattacctgaagcatctgcat 570 ||||||| || || ||||||||||| |||| ||| || || ||| ||||||||| |||| Sbjct: 434 tcaagaaactagttgaagaaggaaagataagatatattggcttatgtgaagcatcggcat 493
>dbj|AK104524.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-G01, full insert sequence Length = 1407 Score = 347 bits (175), Expect = 2e-92 Identities = 405/480 (84%), Gaps = 5/480 (1%) Strand = Plus / Plus Query: 95 ggtgccacgcgtgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctg 154 |||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 69 ggtgccgcgggtgaagctgggctctcaggggatggaggtctcggcgcaggggctcggctg 128 Query: 155 catgggtatgtccgccttctacggcccgcccaagccggagccagacatggtcgcgctcat 214 |||||| |||| | | || || ||||||||||||||| | |||||||| |||||||| Sbjct: 129 catgggcatgtgcccggccttcgagccgcccaagccggaggccgacatggtggcgctcat 188 Query: 215 ccaccacgccgtcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgca 274 || ||||||| |||||||||||||||| | ||||| ||||||| |||| || || || Sbjct: 189 ccgccacgccatcgccgccggcgtcacgttcttcgacacctccgacctctacggccccca 248 Query: 275 caccaacgagatcctcctcggcaaggcgctgctaggg----ggcgtgagggagagggtag 330 |||||||||| ||||||||||||||||||||| |||| |||||| | || ||||| | Sbjct: 249 caccaacgaggtcctcctcggcaaggcgctgc-agggcggcggcgtgcgcgacagggttg 307 Query: 331 agctggccaccaagttcggcatctctttcgccgacggcaagcgggaggttcgcggggatc 390 ||||||||||||||||||||| | ||||||| |||||||| || | | ||||| || | Sbjct: 308 agctggccaccaagttcggcaagttcttcgccggcggcaagccggggatccgcggcgacc 367 Query: 391 cggcctacgtgcgggcggcgtgcgagggcagcctcaagcggctcggcgtcagctgcattg 450 |||| |||||||| ||||||||||||||||||||| ||||||||||||| ||||| | Sbjct: 368 cggcgtacgtgcgcgcggcgtgcgagggcagcctccggcggctcggcgtcgattgcatcg 427 Query: 451 acctttactaccagcaccgcgtcgacaccagggtgcctatcgaggtcacggtgggggaac 510 ||||||||||||||||||||||||||| | |||||| |||||||||||| | || |||| Sbjct: 428 acctttactaccagcaccgcgtcgacaagaaggtgcccatcgaggtcacgattggtgaac 487 Query: 511 tcaagaagcttgtcgaagaaggaaaaataaaatacatcggattacctgaagcatctgcat 570 ||||||| || || ||||||||||| |||| ||| || || ||| ||||||||| |||| Sbjct: 488 tcaagaaactagttgaagaaggaaagataagatatattggcttatgtgaagcatcggcat 547
>dbj|AK068652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160A22, full insert sequence Length = 1448 Score = 347 bits (175), Expect = 2e-92 Identities = 405/480 (84%), Gaps = 5/480 (1%) Strand = Plus / Plus Query: 95 ggtgccacgcgtgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctg 154 |||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 70 ggtgccgcgggtgaagctgggctctcaggggatggaggtctcggcgcaggggctcggctg 129 Query: 155 catgggtatgtccgccttctacggcccgcccaagccggagccagacatggtcgcgctcat 214 |||||| |||| | | || || ||||||||||||||| | |||||||| |||||||| Sbjct: 130 catgggcatgtgcccggccttcgagccgcccaagccggaggccgacatggtggcgctcat 189 Query: 215 ccaccacgccgtcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgca 274 || ||||||| |||||||||||||||| | ||||| ||||||| |||| || || || Sbjct: 190 ccgccacgccatcgccgccggcgtcacgttcttcgacacctccgacctctacggccccca 249 Query: 275 caccaacgagatcctcctcggcaaggcgctgctaggg----ggcgtgagggagagggtag 330 |||||||||| ||||||||||||||||||||| |||| |||||| | || ||||| | Sbjct: 250 caccaacgaggtcctcctcggcaaggcgctgc-agggcggcggcgtgcgcgacagggttg 308 Query: 331 agctggccaccaagttcggcatctctttcgccgacggcaagcgggaggttcgcggggatc 390 ||||||||||||||||||||| | ||||||| |||||||| || | | ||||| || | Sbjct: 309 agctggccaccaagttcggcaagttcttcgccggcggcaagccggggatccgcggcgacc 368 Query: 391 cggcctacgtgcgggcggcgtgcgagggcagcctcaagcggctcggcgtcagctgcattg 450 |||| |||||||| ||||||||||||||||||||| ||||||||||||| ||||| | Sbjct: 369 cggcgtacgtgcgcgcggcgtgcgagggcagcctccggcggctcggcgtcgattgcatcg 428 Query: 451 acctttactaccagcaccgcgtcgacaccagggtgcctatcgaggtcacggtgggggaac 510 ||||||||||||||||||||||||||| | |||||| |||||||||||| | || |||| Sbjct: 429 acctttactaccagcaccgcgtcgacaagaaggtgcccatcgaggtcacgattggtgaac 488 Query: 511 tcaagaagcttgtcgaagaaggaaaaataaaatacatcggattacctgaagcatctgcat 570 ||||||| || || ||||||||||| |||| ||| || || ||| ||||||||| |||| Sbjct: 489 tcaagaaactagttgaagaaggaaagataagatatattggcttatgtgaagcatcggcat 548
>emb|AL606625.3|OSJN00039 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032I19, complete sequence Length = 145383 Score = 260 bits (131), Expect = 5e-66 Identities = 179/195 (91%) Strand = Plus / Plus Query: 106 tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 165 ||||||||||||| ||||| ||||||||||||||||||| || || |||||||| |||| Sbjct: 13473 tgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggatgcatgggcatgt 13532 Query: 166 ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccacgccg 225 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 13533 ccgccttctacggcccgcccaagccggagcccgacatggtggcgctcatccaccacgccg 13592 Query: 226 tcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacgaga 285 ||||||||||||||||||| |||||| ||||||| ||||| || || |||||||||||| Sbjct: 13593 tcgccgccggcgtcaccctcctcgacacctccgacatctacggcccccacaccaacgagc 13652 Query: 286 tcctcctcggcaagg 300 ||||||||||||||| Sbjct: 13653 tcctcctcggcaagg 13667 Score = 236 bits (119), Expect = 7e-59 Identities = 179/199 (89%) Strand = Plus / Plus Query: 102 cgcgtgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggt 161 ||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||| Sbjct: 2393 cgcgtgaagctgggctcgcagggcctggaggtctcggcgcaggggctgggctgcatgggc 2452 Query: 162 atgtccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccac 221 |||||||||||| |||| ||| ||||||||||| | |||||||| ||||||||||||||| Sbjct: 2453 atgtccgccttccacgggccgtccaagccggaggccgacatggtggcgctcatccaccac 2512 Query: 222 gccgtcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaac 281 ||||||||||||||||||||||| |||||| || |||| ||||| ||||||||| ||||| Sbjct: 2513 gccgtcgccgccggcgtcaccctcctcgacaccgccgacatctacgggccgcacgccaac 2572 Query: 282 gagatcctcctcggcaagg 300 ||| |||||||||||||| Sbjct: 2573 gaggccctcctcggcaagg 2591 Score = 228 bits (115), Expect = 2e-56 Identities = 175/195 (89%) Strand = Plus / Plus Query: 106 tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 165 ||||||||||||| ||||| ||||||||||||||||||| || ||||||||||| |||| Sbjct: 22187 tgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggctgcatgggcatgt 22246 Query: 166 ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccacgccg 225 ||||||||||||| || |||||||||||| | |||||||| ||||||||||||||||||| Sbjct: 22247 ccgccttctacgggccacccaagccggaggccgacatggttgcgctcatccaccacgccg 22306 Query: 226 tcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacgaga 285 |||||||||||||||||| |||||| ||||||| || || || || |||||||||||| Sbjct: 22307 tcgccgccggcgtcacccacctcgacacctccgacatgtacggcccccacaccaacgagc 22366 Query: 286 tcctcctcggcaagg 300 ||||||||||||||| Sbjct: 22367 tcctcctcggcaagg 22381 Score = 186 bits (94), Expect = 5e-44 Identities = 154/174 (88%) Strand = Plus / Plus Query: 330 gagctggccaccaagttcggcatctctttcgccgacggcaagcgggaggttcgcggggat 389 |||||||||||||||||||||||| | |||| |||||||||||||| || |||||||| Sbjct: 13807 gagctggccaccaagttcggcatcgcgttcgaagacggcaagcgggacgtccgcggggac 13866 Query: 390 ccggcctacgtgcgggcggcgtgcgagggcagcctcaagcggctcggcgtcagctgcatt 449 ||||| |||||||| ||||||||||||||||||||| ||||||||||||| | |||| Sbjct: 13867 ccggcgtacgtgcgcgcggcgtgcgagggcagcctccggcggctcggcgtcgacagcatc 13926 Query: 450 gacctttactaccagcaccgcgtcgacaccagggtgcctatcgaggtcacggtg 503 |||||||||||||||||||| ||||||| | |||||| ||||||||||||||| Sbjct: 13927 gacctttactaccagcaccgtgtcgacaagaaggtgcccatcgaggtcacggtg 13980 Score = 167 bits (84), Expect = 5e-38 Identities = 165/192 (85%) Strand = Plus / Plus Query: 312 ggcgtgagggagagggtagagctggccaccaagttcggcatctctttcgccgacggcaag 371 ||||||||||||| ||| ||| ||||||| ||||||| | |||| ||||||||||| ||| Sbjct: 22501 ggcgtgagggagaaggtggaggtggccacgaagttcgccgtctcgttcgccgacgggaag 22560 Query: 372 cgggaggttcgcggggatccggcctacgtgcgggcggcgtgcgagggcagcctcaagcgg 431 |||| | ||||| || ||||| |||||||||||||||||||||||||||||| |||| Sbjct: 22561 gtggagatccgcggcgacccggcgtacgtgcgggcggcgtgcgagggcagcctccggcgg 22620 Query: 432 ctcggcgtcagctgcattgacctttactaccagcaccgcgtcgacaccagggtgcctatc 491 ||||||||| ||| | |||||||||||||||||||| ||||||| | |||||| ||| Sbjct: 22621 ctcggcgtcgattgcgtagacctttactaccagcaccgtgtcgacaagaaggtgcccatc 22680 Query: 492 gaggtcacggtg 503 |||||||||||| Sbjct: 22681 gaggtcacggtg 22692 Score = 165 bits (83), Expect = 2e-37 Identities = 146/167 (87%) Strand = Plus / Plus Query: 333 ctggccaccaagttcggcatctctttcgccgacggcaagcgggaggttcgcggggatccg 392 ||||||||||||||||| | | | |||||||||| ||| || | | |||||||| ||| Sbjct: 2763 ctggccaccaagttcggtaaatttctcgccgacggtaaggtggggatccgcggggacccg 2822 Query: 393 gcctacgtgcgggcggcgtgcgagggcagcctcaagcggctcggcgtcagctgcattgac 452 || |||||||||||||||||||||||||||||| |||||||||||||| |||||| ||| Sbjct: 2823 gcgtacgtgcgggcggcgtgcgagggcagcctccagcggctcggcgtcgactgcatagac 2882 Query: 453 ctttactaccagcaccgcgtcgacaccagggtgcctatcgaggtcac 499 ||||||||||||||||||||||||| | |||||| ||||||||||| Sbjct: 2883 ctttactaccagcaccgcgtcgacaagaaggtgcccatcgaggtcac 2929 Score = 153 bits (77), Expect = 8e-34 Identities = 167/197 (84%) Strand = Plus / Plus Query: 106 tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 165 |||||||||| || |||||||||||||| ||||||||||| || ||||||||||| |||| Sbjct: 99305 tgaagctggggtcgcaggggatggaggtgtcggcgcaggggctgggctgcatgggcatgt 99364 Query: 166 ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccacgccg 225 | || | ||||| || ||||||||| | |||||||| |||||| ||| |||||||| Sbjct: 99365 cggcggtgtacggggagcggaagccggaggccgacatggtggcgctcgtccgccacgccg 99424 Query: 226 tcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacgaga 285 ||||||| ||||||||| | |||||| ||||||| |||| |||||||||||||||||| Sbjct: 99425 tcgccgcgggcgtcaccttcctcgacacctccgacgtctacgggccgcacaccaacgagg 99484 Query: 286 tcctcctcggcaaggcg 302 | ||| ||||||||||| Sbjct: 99485 tgctcgtcggcaaggcg 99501 Score = 117 bits (59), Expect = 4e-23 Identities = 101/115 (87%) Strand = Plus / Plus Query: 373 gggaggttcgcggggatccggcctacgtgcgggcggcgtgcgagggcagcctcaagcggc 432 ||||||| ||||| || ||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 99575 gggaggtgcgcggcgacccggcgtacgtgcgggcggcgtgcgagggcagcctccggcggc 99634 Query: 433 tcggcgtcagctgcattgacctttactaccagcaccgcgtcgacaccagggtgcc 487 |||||||| ||||||| ||||| ||||||||||| || ||||| ||| |||||| Sbjct: 99635 tcggcgtcggctgcatcgacctctactaccagcatcgaatcgactccacggtgcc 99689 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 507 gaactcaagaagcttgtcgaagaaggaaaaataaaatacatcggattacctgaagcatct 566 ||||||||||| || || ||||||||||| |||||||| || || ||| ||||||||||| Sbjct: 15093 gaactcaagaaactagttgaagaaggaaagataaaatatattgggttatctgaagcatct 15152 Query: 567 gcat 570 |||| Sbjct: 15153 gcat 15156 Score = 48.1 bits (24), Expect = 0.032 Identities = 54/64 (84%) Strand = Plus / Plus Query: 507 gaactcaagaagcttgtcgaagaaggaaaaataaaatacatcggattacctgaagcatct 566 ||||||||||| || || ||||||||||| |||||||| || || || | ||||||||| Sbjct: 24680 gaactcaagaaactagttgaagaaggaaagataaaatatattggtctatcggaagcatct 24739 Query: 567 gcat 570 |||| Sbjct: 24740 gcat 24743 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 tggccaccaagttcggcatc 353 |||||||||||||||||||| Sbjct: 99545 tggccaccaagttcggcatc 99564 Score = 40.1 bits (20), Expect = 7.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 507 gaactcaagaagcttgtcgaagaaggaaaaataaaatacatcggattacctgaagcatct 566 |||||||| || || || ||||||||||| ||||||| || || ||| |||||||||| Sbjct: 5476 gaactcaaaaaactagttgaagaaggaaaggtaaaatatattgggttatgtgaagcatct 5535 Query: 567 gcat 570 |||| Sbjct: 5536 gcat 5539
>emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008A08, complete sequence Length = 130521 Score = 260 bits (131), Expect = 5e-66 Identities = 179/195 (91%) Strand = Plus / Plus Query: 106 tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 165 ||||||||||||| ||||| ||||||||||||||||||| || || |||||||| |||| Sbjct: 115825 tgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggatgcatgggcatgt 115884 Query: 166 ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccacgccg 225 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 115885 ccgccttctacggcccgcccaagccggagcccgacatggtggcgctcatccaccacgccg 115944 Query: 226 tcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacgaga 285 ||||||||||||||||||| |||||| ||||||| ||||| || || |||||||||||| Sbjct: 115945 tcgccgccggcgtcaccctcctcgacacctccgacatctacggcccccacaccaacgagc 116004 Query: 286 tcctcctcggcaagg 300 ||||||||||||||| Sbjct: 116005 tcctcctcggcaagg 116019 Score = 236 bits (119), Expect = 7e-59 Identities = 179/199 (89%) Strand = Plus / Plus Query: 102 cgcgtgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggt 161 ||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||| Sbjct: 104745 cgcgtgaagctgggctcgcagggcctggaggtctcggcgcaggggctgggctgcatgggc 104804 Query: 162 atgtccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccac 221 |||||||||||| |||| ||| ||||||||||| | |||||||| ||||||||||||||| Sbjct: 104805 atgtccgccttccacgggccgtccaagccggaggccgacatggtggcgctcatccaccac 104864 Query: 222 gccgtcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaac 281 ||||||||||||||||||||||| |||||| || |||| ||||| ||||||||| ||||| Sbjct: 104865 gccgtcgccgccggcgtcaccctcctcgacaccgccgacatctacgggccgcacgccaac 104924 Query: 282 gagatcctcctcggcaagg 300 ||| |||||||||||||| Sbjct: 104925 gaggccctcctcggcaagg 104943 Score = 228 bits (115), Expect = 2e-56 Identities = 175/195 (89%) Strand = Plus / Plus Query: 106 tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 165 ||||||||||||| ||||| ||||||||||||||||||| || ||||||||||| |||| Sbjct: 124539 tgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggctgcatgggcatgt 124598 Query: 166 ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccacgccg 225 ||||||||||||| || |||||||||||| | |||||||| ||||||||||||||||||| Sbjct: 124599 ccgccttctacgggccacccaagccggaggccgacatggttgcgctcatccaccacgccg 124658 Query: 226 tcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacgaga 285 |||||||||||||||||| |||||| ||||||| || || || || |||||||||||| Sbjct: 124659 tcgccgccggcgtcacccacctcgacacctccgacatgtacggcccccacaccaacgagc 124718 Query: 286 tcctcctcggcaagg 300 ||||||||||||||| Sbjct: 124719 tcctcctcggcaagg 124733 Score = 186 bits (94), Expect = 5e-44 Identities = 154/174 (88%) Strand = Plus / Plus Query: 330 gagctggccaccaagttcggcatctctttcgccgacggcaagcgggaggttcgcggggat 389 |||||||||||||||||||||||| | |||| |||||||||||||| || |||||||| Sbjct: 116159 gagctggccaccaagttcggcatcgcgttcgaagacggcaagcgggacgtccgcggggac 116218 Query: 390 ccggcctacgtgcgggcggcgtgcgagggcagcctcaagcggctcggcgtcagctgcatt 449 ||||| |||||||| ||||||||||||||||||||| ||||||||||||| | |||| Sbjct: 116219 ccggcgtacgtgcgcgcggcgtgcgagggcagcctccggcggctcggcgtcgacagcatc 116278 Query: 450 gacctttactaccagcaccgcgtcgacaccagggtgcctatcgaggtcacggtg 503 |||||||||||||||||||| ||||||| | |||||| ||||||||||||||| Sbjct: 116279 gacctttactaccagcaccgtgtcgacaagaaggtgcccatcgaggtcacggtg 116332 Score = 178 bits (90), Expect = 1e-41 Identities = 177/206 (85%) Strand = Plus / Plus Query: 95 ggtgccacgcgtgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctg 154 |||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 88935 ggtgccgcgggtgaagctgggctctcaggggatggaggtctcggcgcaggggctcggctg 88994 Query: 155 catgggtatgtccgccttctacggcccgcccaagccggagccagacatggtcgcgctcat 214 |||||| |||| | | || || ||||||||||||||| | |||||||| |||||||| Sbjct: 88995 catgggcatgtgcccggccttcgagccgcccaagccggaggccgacatggtggcgctcat 89054 Query: 215 ccaccacgccgtcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgca 274 || ||||||| |||||||||||||||| | ||||| ||||||| |||| || || || Sbjct: 89055 ccgccacgccatcgccgccggcgtcacgttcttcgacacctccgacctctacggccccca 89114 Query: 275 caccaacgagatcctcctcggcaagg 300 |||||||||| ||||||||||||||| Sbjct: 89115 caccaacgaggtcctcctcggcaagg 89140 Score = 167 bits (84), Expect = 5e-38 Identities = 165/192 (85%) Strand = Plus / Plus Query: 312 ggcgtgagggagagggtagagctggccaccaagttcggcatctctttcgccgacggcaag 371 ||||||||||||| ||| ||| ||||||| ||||||| | |||| ||||||||||| ||| Sbjct: 124853 ggcgtgagggagaaggtggaggtggccacgaagttcgccgtctcgttcgccgacgggaag 124912 Query: 372 cgggaggttcgcggggatccggcctacgtgcgggcggcgtgcgagggcagcctcaagcgg 431 |||| | ||||| || ||||| |||||||||||||||||||||||||||||| |||| Sbjct: 124913 gtggagatccgcggcgacccggcgtacgtgcgggcggcgtgcgagggcagcctccggcgg 124972 Query: 432 ctcggcgtcagctgcattgacctttactaccagcaccgcgtcgacaccagggtgcctatc 491 ||||||||| ||| | |||||||||||||||||||| ||||||| | |||||| ||| Sbjct: 124973 ctcggcgtcgattgcgtagacctttactaccagcaccgtgtcgacaagaaggtgcccatc 125032 Query: 492 gaggtcacggtg 503 |||||||||||| Sbjct: 125033 gaggtcacggtg 125044 Score = 165 bits (83), Expect = 2e-37 Identities = 146/167 (87%) Strand = Plus / Plus Query: 333 ctggccaccaagttcggcatctctttcgccgacggcaagcgggaggttcgcggggatccg 392 ||||||||||||||||| | | | |||||||||| ||| || | | |||||||| ||| Sbjct: 105115 ctggccaccaagttcggtaaatttctcgccgacggtaaggtggggatccgcggggacccg 105174 Query: 393 gcctacgtgcgggcggcgtgcgagggcagcctcaagcggctcggcgtcagctgcattgac 452 || |||||||||||||||||||||||||||||| |||||||||||||| |||||| ||| Sbjct: 105175 gcgtacgtgcgggcggcgtgcgagggcagcctccagcggctcggcgtcgactgcatagac 105234 Query: 453 ctttactaccagcaccgcgtcgacaccagggtgcctatcgaggtcac 499 ||||||||||||||||||||||||| | |||||| ||||||||||| Sbjct: 105235 ctttactaccagcaccgcgtcgacaagaaggtgcccatcgaggtcac 105281 Score = 165 bits (83), Expect = 2e-37 Identities = 155/179 (86%) Strand = Plus / Plus Query: 324 agggtagagctggccaccaagttcggcatctctttcgccgacggcaagcgggaggttcgc 383 ||||| |||||||||||||||||||||| | ||||||| |||||||| || | | ||| Sbjct: 89272 agggttgagctggccaccaagttcggcaagttcttcgccggcggcaagccggggatccgc 89331 Query: 384 ggggatccggcctacgtgcgggcggcgtgcgagggcagcctcaagcggctcggcgtcagc 443 || || ||||| |||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 89332 ggcgacccggcgtacgtgcgcgcggcgtgcgagggcagcctccggcggctcggcgtcgat 89391 Query: 444 tgcattgacctttactaccagcaccgcgtcgacaccagggtgcctatcgaggtcacggt 502 ||||| |||||||||||||||||||||||||||| | |||||| |||||||||||||| Sbjct: 89392 tgcatcgacctttactaccagcaccgcgtcgacaagaaggtgcccatcgaggtcacggt 89450 Score = 67.9 bits (34), Expect = 3e-08 Identities = 89/105 (84%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 104 cgtgaagctgggctcccaggggatggaggtctcggcgca--gggcctcggctgcatgggt 161 ||||||||||||||| |||||| ||| |||| |||| |||||| ||||||||||| Sbjct: 86511 cgtgaagctgggctcgcaggggccggatatctcaacgcagtgggcctgggctgcatgggc 86570 Query: 162 atgtccgccttctacggcccgcccaa-gccggagccagacatggt 205 |||||||| |||||||||||| |||| ||||||| | |||||||| Sbjct: 86571 atgtccgctttctacggcccgtccaatgccggaggccgacatggt 86615 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 507 gaactcaagaagcttgtcgaagaaggaaaaataaaatacatcggattacctgaagcatct 566 ||||||||||| || || ||||||||||| |||||||| || || ||| ||||||||||| Sbjct: 117445 gaactcaagaaactagttgaagaaggaaagataaaatatattgggttatctgaagcatct 117504 Query: 567 gcat 570 |||| Sbjct: 117505 gcat 117508 Score = 48.1 bits (24), Expect = 0.032 Identities = 54/64 (84%) Strand = Plus / Plus Query: 507 gaactcaagaagcttgtcgaagaaggaaaaataaaatacatcggattacctgaagcatct 566 ||||||||||| || || ||||||||||| |||||||| || || || | ||||||||| Sbjct: 127032 gaactcaagaaactagttgaagaaggaaagataaaatatattggtctatcggaagcatct 127091 Query: 567 gcat 570 |||| Sbjct: 127092 gcat 127095 Score = 40.1 bits (20), Expect = 7.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 507 gaactcaagaagcttgtcgaagaaggaaaaataaaatacatcggattacctgaagcatct 566 |||||||| || || || ||||||||||| ||||||| || || ||| |||||||||| Sbjct: 107828 gaactcaaaaaactagttgaagaaggaaaggtaaaatatattgggttatgtgaagcatct 107887 Query: 567 gcat 570 |||| Sbjct: 107888 gcat 107891 Score = 40.1 bits (20), Expect = 7.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 507 gaactcaagaagcttgtcgaagaaggaaaaataaaatacatcggattacctgaagcatct 566 ||||||||||| || || ||||||||||| |||| ||| || || ||| ||||||||| Sbjct: 92309 gaactcaagaaactagttgaagaaggaaagataagatatattggcttatgtgaagcatcg 92368 Query: 567 gcat 570 |||| Sbjct: 92369 gcat 92372
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 260 bits (131), Expect = 5e-66 Identities = 179/195 (91%) Strand = Plus / Plus Query: 106 tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 165 ||||||||||||| ||||| ||||||||||||||||||| || || |||||||| |||| Sbjct: 15929260 tgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggatgcatgggcatgt 15929319 Query: 166 ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccacgccg 225 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 15929320 ccgccttctacggcccgcccaagccggagcccgacatggtggcgctcatccaccacgccg 15929379 Query: 226 tcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacgaga 285 ||||||||||||||||||| |||||| ||||||| ||||| || || |||||||||||| Sbjct: 15929380 tcgccgccggcgtcaccctcctcgacacctccgacatctacggcccccacaccaacgagc 15929439 Query: 286 tcctcctcggcaagg 300 ||||||||||||||| Sbjct: 15929440 tcctcctcggcaagg 15929454 Score = 236 bits (119), Expect = 7e-59 Identities = 179/199 (89%) Strand = Plus / Plus Query: 102 cgcgtgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggt 161 ||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||| Sbjct: 15918180 cgcgtgaagctgggctcgcagggcctggaggtctcggcgcaggggctgggctgcatgggc 15918239 Query: 162 atgtccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccac 221 |||||||||||| |||| ||| ||||||||||| | |||||||| ||||||||||||||| Sbjct: 15918240 atgtccgccttccacgggccgtccaagccggaggccgacatggtggcgctcatccaccac 15918299 Query: 222 gccgtcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaac 281 ||||||||||||||||||||||| |||||| || |||| ||||| ||||||||| ||||| Sbjct: 15918300 gccgtcgccgccggcgtcaccctcctcgacaccgccgacatctacgggccgcacgccaac 15918359 Query: 282 gagatcctcctcggcaagg 300 ||| |||||||||||||| Sbjct: 15918360 gaggccctcctcggcaagg 15918378 Score = 228 bits (115), Expect = 2e-56 Identities = 175/195 (89%) Strand = Plus / Plus Query: 106 tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 165 ||||||||||||| ||||| ||||||||||||||||||| || ||||||||||| |||| Sbjct: 15937974 tgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggctgcatgggcatgt 15938033 Query: 166 ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccacgccg 225 ||||||||||||| || |||||||||||| | |||||||| ||||||||||||||||||| Sbjct: 15938034 ccgccttctacgggccacccaagccggaggccgacatggttgcgctcatccaccacgccg 15938093 Query: 226 tcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacgaga 285 |||||||||||||||||| |||||| ||||||| || || || || |||||||||||| Sbjct: 15938094 tcgccgccggcgtcacccacctcgacacctccgacatgtacggcccccacaccaacgagc 15938153 Query: 286 tcctcctcggcaagg 300 ||||||||||||||| Sbjct: 15938154 tcctcctcggcaagg 15938168 Score = 186 bits (94), Expect = 5e-44 Identities = 154/174 (88%) Strand = Plus / Plus Query: 330 gagctggccaccaagttcggcatctctttcgccgacggcaagcgggaggttcgcggggat 389 |||||||||||||||||||||||| | |||| |||||||||||||| || |||||||| Sbjct: 15929594 gagctggccaccaagttcggcatcgcgttcgaagacggcaagcgggacgtccgcggggac 15929653 Query: 390 ccggcctacgtgcgggcggcgtgcgagggcagcctcaagcggctcggcgtcagctgcatt 449 ||||| |||||||| ||||||||||||||||||||| ||||||||||||| | |||| Sbjct: 15929654 ccggcgtacgtgcgcgcggcgtgcgagggcagcctccggcggctcggcgtcgacagcatc 15929713 Query: 450 gacctttactaccagcaccgcgtcgacaccagggtgcctatcgaggtcacggtg 503 |||||||||||||||||||| ||||||| | |||||| ||||||||||||||| Sbjct: 15929714 gacctttactaccagcaccgtgtcgacaagaaggtgcccatcgaggtcacggtg 15929767 Score = 178 bits (90), Expect = 1e-41 Identities = 177/206 (85%) Strand = Plus / Plus Query: 95 ggtgccacgcgtgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctg 154 |||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 15902370 ggtgccgcgggtgaagctgggctctcaggggatggaggtctcggcgcaggggctcggctg 15902429 Query: 155 catgggtatgtccgccttctacggcccgcccaagccggagccagacatggtcgcgctcat 214 |||||| |||| | | || || ||||||||||||||| | |||||||| |||||||| Sbjct: 15902430 catgggcatgtgcccggccttcgagccgcccaagccggaggccgacatggtggcgctcat 15902489 Query: 215 ccaccacgccgtcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgca 274 || ||||||| |||||||||||||||| | ||||| ||||||| |||| || || || Sbjct: 15902490 ccgccacgccatcgccgccggcgtcacgttcttcgacacctccgacctctacggccccca 15902549 Query: 275 caccaacgagatcctcctcggcaagg 300 |||||||||| ||||||||||||||| Sbjct: 15902550 caccaacgaggtcctcctcggcaagg 15902575 Score = 167 bits (84), Expect = 5e-38 Identities = 165/192 (85%) Strand = Plus / Plus Query: 312 ggcgtgagggagagggtagagctggccaccaagttcggcatctctttcgccgacggcaag 371 ||||||||||||| ||| ||| ||||||| ||||||| | |||| ||||||||||| ||| Sbjct: 15938288 ggcgtgagggagaaggtggaggtggccacgaagttcgccgtctcgttcgccgacgggaag 15938347 Query: 372 cgggaggttcgcggggatccggcctacgtgcgggcggcgtgcgagggcagcctcaagcgg 431 |||| | ||||| || ||||| |||||||||||||||||||||||||||||| |||| Sbjct: 15938348 gtggagatccgcggcgacccggcgtacgtgcgggcggcgtgcgagggcagcctccggcgg 15938407 Query: 432 ctcggcgtcagctgcattgacctttactaccagcaccgcgtcgacaccagggtgcctatc 491 ||||||||| ||| | |||||||||||||||||||| ||||||| | |||||| ||| Sbjct: 15938408 ctcggcgtcgattgcgtagacctttactaccagcaccgtgtcgacaagaaggtgcccatc 15938467 Query: 492 gaggtcacggtg 503 |||||||||||| Sbjct: 15938468 gaggtcacggtg 15938479 Score = 165 bits (83), Expect = 2e-37 Identities = 146/167 (87%) Strand = Plus / Plus Query: 333 ctggccaccaagttcggcatctctttcgccgacggcaagcgggaggttcgcggggatccg 392 ||||||||||||||||| | | | |||||||||| ||| || | | |||||||| ||| Sbjct: 15918550 ctggccaccaagttcggtaaatttctcgccgacggtaaggtggggatccgcggggacccg 15918609 Query: 393 gcctacgtgcgggcggcgtgcgagggcagcctcaagcggctcggcgtcagctgcattgac 452 || |||||||||||||||||||||||||||||| |||||||||||||| |||||| ||| Sbjct: 15918610 gcgtacgtgcgggcggcgtgcgagggcagcctccagcggctcggcgtcgactgcatagac 15918669 Query: 453 ctttactaccagcaccgcgtcgacaccagggtgcctatcgaggtcac 499 ||||||||||||||||||||||||| | |||||| ||||||||||| Sbjct: 15918670 ctttactaccagcaccgcgtcgacaagaaggtgcccatcgaggtcac 15918716 Score = 165 bits (83), Expect = 2e-37 Identities = 155/179 (86%) Strand = Plus / Plus Query: 324 agggtagagctggccaccaagttcggcatctctttcgccgacggcaagcgggaggttcgc 383 ||||| |||||||||||||||||||||| | ||||||| |||||||| || | | ||| Sbjct: 15902707 agggttgagctggccaccaagttcggcaagttcttcgccggcggcaagccggggatccgc 15902766 Query: 384 ggggatccggcctacgtgcgggcggcgtgcgagggcagcctcaagcggctcggcgtcagc 443 || || ||||| |||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 15902767 ggcgacccggcgtacgtgcgcgcggcgtgcgagggcagcctccggcggctcggcgtcgat 15902826 Query: 444 tgcattgacctttactaccagcaccgcgtcgacaccagggtgcctatcgaggtcacggt 502 ||||| |||||||||||||||||||||||||||| | |||||| |||||||||||||| Sbjct: 15902827 tgcatcgacctttactaccagcaccgcgtcgacaagaaggtgcccatcgaggtcacggt 15902885 Score = 153 bits (77), Expect = 8e-34 Identities = 167/197 (84%) Strand = Plus / Plus Query: 106 tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 165 |||||||||| || |||||||||||||| ||||||||||| || ||||||||||| |||| Sbjct: 16015092 tgaagctggggtcgcaggggatggaggtgtcggcgcaggggctgggctgcatgggcatgt 16015151 Query: 166 ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccacgccg 225 | || | ||||| || ||||||||| | |||||||| |||||| ||| |||||||| Sbjct: 16015152 cggcggtgtacggggagcggaagccggaggccgacatggtggcgctcgtccgccacgccg 16015211 Query: 226 tcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacgaga 285 ||||||| ||||||||| | |||||| ||||||| |||| |||||||||||||||||| Sbjct: 16015212 tcgccgcgggcgtcaccttcctcgacacctccgacgtctacgggccgcacaccaacgagg 16015271 Query: 286 tcctcctcggcaaggcg 302 | ||| ||||||||||| Sbjct: 16015272 tgctcgtcggcaaggcg 16015288 Score = 117 bits (59), Expect = 4e-23 Identities = 101/115 (87%) Strand = Plus / Plus Query: 373 gggaggttcgcggggatccggcctacgtgcgggcggcgtgcgagggcagcctcaagcggc 432 ||||||| ||||| || ||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 16015362 gggaggtgcgcggcgacccggcgtacgtgcgggcggcgtgcgagggcagcctccggcggc 16015421 Query: 433 tcggcgtcagctgcattgacctttactaccagcaccgcgtcgacaccagggtgcc 487 |||||||| ||||||| ||||| ||||||||||| || ||||| ||| |||||| Sbjct: 16015422 tcggcgtcggctgcatcgacctctactaccagcatcgaatcgactccacggtgcc 16015476 Score = 67.9 bits (34), Expect = 3e-08 Identities = 89/105 (84%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 104 cgtgaagctgggctcccaggggatggaggtctcggcgca--gggcctcggctgcatgggt 161 ||||||||||||||| |||||| ||| |||| |||| |||||| ||||||||||| Sbjct: 15899946 cgtgaagctgggctcgcaggggccggatatctcaacgcagtgggcctgggctgcatgggc 15900005 Query: 162 atgtccgccttctacggcccgcccaa-gccggagccagacatggt 205 |||||||| |||||||||||| |||| ||||||| | |||||||| Sbjct: 15900006 atgtccgctttctacggcccgtccaatgccggaggccgacatggt 15900050 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 507 gaactcaagaagcttgtcgaagaaggaaaaataaaatacatcggattacctgaagcatct 566 ||||||||||| || || ||||||||||| |||||||| || || ||| ||||||||||| Sbjct: 15930880 gaactcaagaaactagttgaagaaggaaagataaaatatattgggttatctgaagcatct 15930939 Query: 567 gcat 570 |||| Sbjct: 15930940 gcat 15930943 Score = 48.1 bits (24), Expect = 0.032 Identities = 54/64 (84%) Strand = Plus / Plus Query: 507 gaactcaagaagcttgtcgaagaaggaaaaataaaatacatcggattacctgaagcatct 566 ||||||||||| || || ||||||||||| |||||||| || || || | ||||||||| Sbjct: 15940467 gaactcaagaaactagttgaagaaggaaagataaaatatattggtctatcggaagcatct 15940526 Query: 567 gcat 570 |||| Sbjct: 15940527 gcat 15940530 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 tggccaccaagttcggcatc 353 |||||||||||||||||||| Sbjct: 16015332 tggccaccaagttcggcatc 16015351 Score = 40.1 bits (20), Expect = 7.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 507 gaactcaagaagcttgtcgaagaaggaaaaataaaatacatcggattacctgaagcatct 566 |||||||| || || || ||||||||||| ||||||| || || ||| |||||||||| Sbjct: 15921263 gaactcaaaaaactagttgaagaaggaaaggtaaaatatattgggttatgtgaagcatct 15921322 Query: 567 gcat 570 |||| Sbjct: 15921323 gcat 15921326 Score = 40.1 bits (20), Expect = 7.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 507 gaactcaagaagcttgtcgaagaaggaaaaataaaatacatcggattacctgaagcatct 566 ||||||||||| || || ||||||||||| |||| ||| || || ||| ||||||||| Sbjct: 15905744 gaactcaagaaactagttgaagaaggaaagataagatatattggcttatgtgaagcatcg 15905803 Query: 567 gcat 570 |||| Sbjct: 15905804 gcat 15905807
>ref|XM_471942.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1107 Score = 234 bits (118), Expect = 3e-58 Identities = 178/198 (89%) Strand = Plus / Plus Query: 102 cgcgtgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggt 161 ||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||| Sbjct: 37 cgcgtgaagctgggctcgcagggcctggaggtctcggcgcaggggctgggctgcatgggc 96 Query: 162 atgtccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccac 221 |||||||||||| |||| ||| ||||||||||| | |||||||| ||||||||||||||| Sbjct: 97 atgtccgccttccacgggccgtccaagccggaggccgacatggtggcgctcatccaccac 156 Query: 222 gccgtcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaac 281 ||||||||||||||||||||||| |||||| || |||| ||||| ||||||||| ||||| Sbjct: 157 gccgtcgccgccggcgtcaccctcctcgacaccgccgacatctacgggccgcacgccaac 216 Query: 282 gagatcctcctcggcaag 299 ||| ||||||||||||| Sbjct: 217 gaggccctcctcggcaag 234 Score = 178 bits (90), Expect = 1e-41 Identities = 201/238 (84%) Strand = Plus / Plus Query: 333 ctggccaccaagttcggcatctctttcgccgacggcaagcgggaggttcgcggggatccg 392 ||||||||||||||||| | | | |||||||||| ||| || | | |||||||| ||| Sbjct: 268 ctggccaccaagttcggtaaatttctcgccgacggtaaggtggggatccgcggggacccg 327 Query: 393 gcctacgtgcgggcggcgtgcgagggcagcctcaagcggctcggcgtcagctgcattgac 452 || |||||||||||||||||||||||||||||| |||||||||||||| |||||| ||| Sbjct: 328 gcgtacgtgcgggcggcgtgcgagggcagcctccagcggctcggcgtcgactgcatagac 387 Query: 453 ctttactaccagcaccgcgtcgacaccagggtgcctatcgaggtcacggtgggggaactc 512 ||||||||||||||||||||||||| | |||||| ||||||||||| | | |||||| Sbjct: 388 ctttactaccagcaccgcgtcgacaagaaggtgcccatcgaggtcactattgatgaactc 447 Query: 513 aagaagcttgtcgaagaaggaaaaataaaatacatcggattacctgaagcatctgcat 570 || || || || ||||||||||| ||||||| || || ||| |||||||||||||| Sbjct: 448 aaaaaactagttgaagaaggaaaggtaaaatatattgggttatgtgaagcatctgcat 505
>dbj|AK061807.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-A04, full insert sequence Length = 1106 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 338 caccaagttcggcatctctttcgccgacggcaagcgggaggttcgcggggatccggccta 397 |||||||||||||| | ||||||| |||||||| || | | ||||| || ||||| || Sbjct: 1 caccaagttcggcaagttcttcgccggcggcaagccggggatccgcggcgacccggcgta 60 Query: 398 cgtgcgggcggcgtgcgagggcagcctcaagcggctcggcgtcagctgcattgaccttta 457 |||||| ||||||||||||||||||||| ||||||||||||| ||||| |||||||| Sbjct: 61 cgtgcgcgcggcgtgcgagggcagcctccggcggctcggcgtcgattgcatcgaccttta 120 Query: 458 ctaccagcaccgcgtcgacaccagggtgcctatcgaggtcacggtgggggaactcaagaa 517 |||||||||||||||||||| | |||||| |||||||||||| | || ||||||||||| Sbjct: 121 ctaccagcaccgcgtcgacaagaaggtgcccatcgaggtcacgattggtgaactcaagaa 180 Query: 518 gcttgtcgaagaaggaaaaataaaatacatcggattacctgaagcatctgcat 570 || || ||||||||||| |||| ||| || || ||| ||||||||| |||| Sbjct: 181 actagttgaagaaggaaagataagatatattggcttatgtgaagcatcggcat 233
>gb|AY107154.1| Zea mays PCO148860 mRNA sequence Length = 1102 Score = 159 bits (80), Expect = 1e-35 Identities = 194/232 (83%) Strand = Plus / Plus Query: 339 accaagttcggcatctctttcgccgacggcaagcgggaggttcgcggggatccggcctac 398 |||||||| | | |||| ||||||||||||||||| ||| | ||||| || ||||| || Sbjct: 2 accaagtttgccgtctccttcgccgacggcaagcgcgagatccgcggtgacccggcgtat 61 Query: 399 gtgcgggcggcgtgcgagggcagcctcaagcggctcggcgtcagctgcattgacctttac 458 || ||||| || ||||||| ||||||||||||||||||| || |||||| ||||| ||| Sbjct: 62 gtacgggcagcctgcgaggccagcctcaagcggctcggcatcgactgcatcgacctctac 121 Query: 459 taccagcaccgcgtcgacaccagggtgcctatcgaggtcacggtgggggaactcaagaag 518 |||||||||||| |||||| | |||||| |||||||||||| | || |||||||||||| Sbjct: 122 taccagcaccgcatcgacaagaaggtgcccatcgaggtcacgattggtgaactcaagaag 181 Query: 519 cttgtcgaagaaggaaaaataaaatacatcggattacctgaagcatctgcat 570 || || ||||||||||| | || ||||| || ||| | ||||||||||||| Sbjct: 182 ctagtggaagaaggaaaggttaagtacattgggttatccgaagcatctgcat 233
>ref|XM_471950.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1068 Score = 153 bits (77), Expect = 8e-34 Identities = 167/197 (84%) Strand = Plus / Plus Query: 106 tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 165 |||||||||| || |||||||||||||| ||||||||||| || ||||||||||| |||| Sbjct: 50 tgaagctggggtcgcaggggatggaggtgtcggcgcaggggctgggctgcatgggcatgt 109 Query: 166 ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccacgccg 225 | || | ||||| || ||||||||| | |||||||| |||||| ||| |||||||| Sbjct: 110 cggcggtgtacggggagcggaagccggaggccgacatggtggcgctcgtccgccacgccg 169 Query: 226 tcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacgaga 285 ||||||| ||||||||| | |||||| ||||||| |||| |||||||||||||||||| Sbjct: 170 tcgccgcgggcgtcaccttcctcgacacctccgacgtctacgggccgcacaccaacgagg 229 Query: 286 tcctcctcggcaaggcg 302 | ||| ||||||||||| Sbjct: 230 tgctcgtcggcaaggcg 246 Score = 143 bits (72), Expect = 7e-31 Identities = 165/196 (84%) Strand = Plus / Plus Query: 373 gggaggttcgcggggatccggcctacgtgcgggcggcgtgcgagggcagcctcaagcggc 432 ||||||| ||||| || ||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 320 gggaggtgcgcggcgacccggcgtacgtgcgggcggcgtgcgagggcagcctccggcggc 379 Query: 433 tcggcgtcagctgcattgacctttactaccagcaccgcgtcgacaccagggtgcctatcg 492 |||||||| ||||||| ||||| ||||||||||| || ||||| ||| |||||| | | Sbjct: 380 tcggcgtcggctgcatcgacctctactaccagcatcgaatcgactccacggtgcccgttg 439 Query: 493 aggtcacggtgggggaactcaagaagcttgtcgaagaaggaaaaataaaatacatcggat 552 || ||||| |||| || || |||||||| || |||||||| || || |||||||| |||| Sbjct: 440 agatcacgatgggtgagctgaagaagctggttgaagaaggcaagatcaaatacattggat 499 Query: 553 tacctgaagcatctgc 568 || |||| || ||||| Sbjct: 500 tatctgaggcctctgc 515 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 tggccaccaagttcggcatc 353 |||||||||||||||||||| Sbjct: 290 tggccaccaagttcggcatc 309
>dbj|AK103553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132F18, full insert sequence Length = 1236 Score = 153 bits (77), Expect = 8e-34 Identities = 167/197 (84%) Strand = Plus / Plus Query: 106 tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 165 |||||||||| || |||||||||||||| ||||||||||| || ||||||||||| |||| Sbjct: 102 tgaagctggggtcgcaggggatggaggtgtcggcgcaggggctgggctgcatgggcatgt 161 Query: 166 ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccacgccg 225 | || | ||||| || ||||||||| | |||||||| |||||| ||| |||||||| Sbjct: 162 cggcggtgtacggggagcggaagccggaggccgacatggtggcgctcgtccgccacgccg 221 Query: 226 tcgccgccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacgaga 285 ||||||| ||||||||| | |||||| ||||||| |||| |||||||||||||||||| Sbjct: 222 tcgccgcgggcgtcaccttcctcgacacctccgacgtctacgggccgcacaccaacgagg 281 Query: 286 tcctcctcggcaaggcg 302 | ||| ||||||||||| Sbjct: 282 tgctcgtcggcaaggcg 298 Score = 143 bits (72), Expect = 7e-31 Identities = 165/196 (84%) Strand = Plus / Plus Query: 373 gggaggttcgcggggatccggcctacgtgcgggcggcgtgcgagggcagcctcaagcggc 432 ||||||| ||||| || ||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 372 gggaggtgcgcggcgacccggcgtacgtgcgggcggcgtgcgagggcagcctccggcggc 431 Query: 433 tcggcgtcagctgcattgacctttactaccagcaccgcgtcgacaccagggtgcctatcg 492 |||||||| ||||||| ||||| ||||||||||| || ||||| ||| |||||| | | Sbjct: 432 tcggcgtcggctgcatcgacctctactaccagcatcgaatcgactccacggtgcccgttg 491 Query: 493 aggtcacggtgggggaactcaagaagcttgtcgaagaaggaaaaataaaatacatcggat 552 || ||||| |||| || || |||||||| || |||||||| || || |||||||| |||| Sbjct: 492 agatcacgatgggtgagctgaagaagctggttgaagaaggcaagatcaaatacattggat 551 Query: 553 tacctgaagcatctgc 568 || |||| || ||||| Sbjct: 552 tatctgaggcctctgc 567 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 tggccaccaagttcggcatc 353 |||||||||||||||||||| Sbjct: 342 tggccaccaagttcggcatc 361
>dbj|AK105093.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-A01, full insert sequence Length = 1109 Score = 101 bits (51), Expect = 2e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 428 gcggctcggcgtcagctgcattgacctttactaccagcaccgcgtcgacaccagggtgcc 487 ||||||||||||| ||| | |||||||||||||||||||| ||||||| | |||||| Sbjct: 128 gcggctcggcgtcgattgcgtagacctttactaccagcaccgtgtcgacaagaaggtgcc 187 Query: 488 tatcgaggtcacggtgggggaactcaagaagcttgtcgaagaaggaaaaataaaatacat 547 |||||||||||| | || ||||||||||| || || ||||||||||| |||||||| || Sbjct: 188 catcgaggtcacgattggtgaactcaagaaactagttgaagaaggaaagataaaatatat 247 Query: 548 cggattacctgaagcatctgcat 570 || || | ||||||||||||| Sbjct: 248 tggtctatcggaagcatctgcat 270
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 411 tgcgagggcagcctcaagcggctcggcgtcagctgcattgacctttactaccagcaccgc 470 |||||||||||||| |||||||| |||||| |||||| ||||||||||||| ||||||| Sbjct: 1196782 tgcgagggcagccttaagcggctgggcgtcgactgcatcgacctttactacctgcaccgc 1196841 Query: 471 gtcga 475 ||||| Sbjct: 1196842 gtcga 1196846 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 130 aggtctcggcgcagggcctcggctgcatgggtatgtccgccttctacggcccgc 183 |||| ||||||| ||| |||||||||||||| ||| ||| ||||||||||||| Sbjct: 1196498 aggtttcggcgctgggtctcggctgcatgggcatgagcgctttctacggcccgc 1196551 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 332 gctggccaccaagttcggcatc 353 |||||||||||||||||||||| Sbjct: 1196694 gctggccaccaagttcggcatc 1196715 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 ccgtcgccgccggcgtcaccctgc 246 |||||| ||||||||||||||||| Sbjct: 932487 ccgtcggcgccggcgtcaccctgc 932464
>emb|AJ715821.1| Alicyclobacillus acidocaldarius kdpDE and kdpZFABCN operon, type strain ATCC 27009 Length = 11667 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 420 agcctcaagcggctcggcgtcagctgcattgacctttactaccagcaccgcgtcga 475 |||||||||||||| |||||| || ||| ||||| |||||||||||||||||||| Sbjct: 11159 agcctcaagcggcttggcgtcgactacatcgacctgtactaccagcaccgcgtcga 11214
>ref|NM_192811.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 888 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 411 tgcgagggcagcctcaagcggctcggcgtcagctgcattgacctttactaccagcaccgc 470 ||||||| ||||||| || ||||||||| || ||| ||||| ||||||||||||||| Sbjct: 301 tgcgaggccagcctcggccgcctcggcgtcgactacatcgacctctactaccagcaccgc 360 Query: 471 gtcgacacca 480 |||||||||| Sbjct: 361 gtcgacacca 370 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 277 ccaacgagatcctcctcggcaaggcgctg 305 ||||||||||||||||||||||||||||| Sbjct: 164 ccaacgagatcctcctcggcaaggcgctg 192
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 411 tgcgagggcagcctcaagcggctcggcgtcagctgcattgacctttactaccagcaccgc 470 ||||||| ||||||| || ||||||||| || ||| ||||| ||||||||||||||| Sbjct: 24577515 tgcgaggccagcctcggccgcctcggcgtcgactacatcgacctctactaccagcaccgc 24577456 Query: 471 gtcgacacca 480 |||||||||| Sbjct: 24577455 gtcgacacca 24577446 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 277 ccaacgagatcctcctcggcaagg 300 |||||||||||||||||||||||| Sbjct: 24577747 ccaacgagatcctcctcggcaagg 24577724
>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1040D09 Length = 148102 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 411 tgcgagggcagcctcaagcggctcggcgtcagctgcattgacctttactaccagcaccgc 470 ||||||| ||||||| || ||||||||| || ||| ||||| ||||||||||||||| Sbjct: 3478 tgcgaggccagcctcggccgcctcggcgtcgactacatcgacctctactaccagcaccgc 3419 Query: 471 gtcgacacca 480 |||||||||| Sbjct: 3418 gtcgacacca 3409 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 277 ccaacgagatcctcctcggcaagg 300 |||||||||||||||||||||||| Sbjct: 3710 ccaacgagatcctcctcggcaagg 3687
>dbj|AK100460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091N11, full insert sequence Length = 1327 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 411 tgcgagggcagcctcaagcggctcggcgtcagctgcattgacctttactaccagcaccgc 470 ||||||| ||||||| || ||||||||| || ||| ||||| ||||||||||||||| Sbjct: 450 tgcgaggccagcctcggccgcctcggcgtcgactacatcgacctctactaccagcaccgc 509 Query: 471 gtcgacacca 480 |||||||||| Sbjct: 510 gtcgacacca 519 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 277 ccaacgagatcctcctcggcaaggcgctg 305 ||||||||||||||||||||||||||||| Sbjct: 313 ccaacgagatcctcctcggcaaggcgctg 341
>gb|AY105958.1| Zea mays PCO114043 mRNA sequence Length = 1434 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 237 gtcaccctgctcgactcctccgatatctatgggccgcacaccaacgagatcctcctcggc 296 |||||| || ||||| ||||||| | || ||||| | ||||||||| |||||||||||| Sbjct: 251 gtcaccttgttcgacacctccgacgtatacgggcccctcaccaacgaaatcctcctcggc 310 Query: 297 aaggcgctg 305 ||||||||| Sbjct: 311 aaggcgctg 319 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 443 ctgcattgacctttactaccagcaccgcgtcgacacca 480 |||||| ||||| ||||||||||||||| | ||||||| Sbjct: 460 ctgcatcgacctctactaccagcaccgcattgacacca 497
>gb|AY109071.1| Zea mays PCO122073 mRNA sequence Length = 1331 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 450 gacctttactaccagcaccgcgtcgacacca 480 ||||| ||||||||||||||||||||||||| Sbjct: 525 gacctctactaccagcaccgcgtcgacacca 555 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 247 tcgactcctccgatatctatgggccgcacaccaacgagatcctcctcggcaaggcgct 304 ||||| |||||||| ||| ||||| | ||||||||||| |||||| || |||||||| Sbjct: 322 tcgacacctccgatgcctacgggccccgcaccaacgagaccctcctggggaaggcgct 379
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 127 tggaggtctcggcgcagggcctcggctgcatggg 160 ||||||||||||||| ||||||||||||||||| Sbjct: 6108901 tggaggtctcggcgcttggcctcggctgcatggg 6108868
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 144 ggcctcggctgcatgggtatgtccgccttctacggcccgccc 185 ||||||||||||||||| ||||| | |||||||||| ||||| Sbjct: 2997820 ggcctcggctgcatgggcatgtctgacttctacggcacgccc 2997779 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cacgccgtcgccgccggcgt 238 |||||||||||||||||||| Sbjct: 1538650 cacgccgtcgccgccggcgt 1538669
>gb|AF030301.1|AF030301 Helianthus annuus auxin-induced protein (HaAC1) mRNA, complete cds Length = 1218 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 129 gaggtctcggcgcagggcctcggctgcatgggtatgtccgccttctacggcccgcccaag 188 |||||||| || ||||| | ||||||||| | |||||||| |||||||| || ||||| Sbjct: 57 gaggtctcagctcagggtttaggctgcatgagcatgtccgctttctacggacctcccaaa 116 Query: 189 ccggagccagacatggtcgcgctcatccaccacgccgt 226 || || || |||||| || ||||||||||||||||| Sbjct: 117 cctgaacctgacatgatcaatctcatccaccacgccgt 154
>gb|AF486581.1| Uncultured bacterium aminoglycoside 3'-N-acetyltransferase gene, complete cds Length = 38269 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 262 tctatgggccgcacaccaacgagatcctcctcggcaaggcgctg 305 ||||||||||| | |||||||||| ||| |||||||||||||| Sbjct: 29842 tctatgggccgttcgccaacgagattctcgtcggcaaggcgctg 29885 Score = 40.1 bits (20), Expect = 7.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 458 ctaccagcaccgcgtcgacaccagggtgcctatcgaggtcacggtggg 505 ||||| ||||||||||||| | |||||| ||||||| ||||||||| Sbjct: 30053 ctacctgcaccgcgtcgaccctcaggtgccgatcgaggacacggtggg 30100
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Minus Query: 450 gacctttactaccagcaccgcgtcgacaccagggtgcctatcgaggtcacggtggg 505 ||||| |||||||||||||||||||| ||| ||||| ||||||| ||| ||||| Sbjct: 3450351 gacctctactaccagcaccgcgtcgatcccaccgtgccgatcgaggacaccgtggg 3450296 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 110 gctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatggg 160 ||||||| ||||||| | ||||| ||||||| ||||||||||||||||| Sbjct: 633924 gctgggcagccaggggctcgaggtgtcggcgctcggcctcggctgcatggg 633974
>ref|XM_469528.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1113 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 110 gctgggctcccaggggatggaggtctcggcg 140 ||||||||||||| |||||| |||||||||| Sbjct: 1077 gctgggctcccagaggatggtggtctcggcg 1047
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 221 cgccgtcgccgccggcgtcaccctgctcgac 251 ||||| ||||||||||| ||||||||||||| Sbjct: 2318544 cgccgccgccgccggcgccaccctgctcgac 2318574
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 110 gctgggctcccaggggatggaggtctcggcg 140 ||||||||||||| |||||| |||||||||| Sbjct: 28527793 gctgggctcccagaggatggtggtctcggcg 28527823
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 275 caccaacgagatcctcctcggcaaggcgctg 305 ||||||||||||||||||||| || |||||| Sbjct: 278344 caccaacgagatcctcctcggaaaagcgctg 278314
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 110 gctgggctcccaggggatggaggtctcggcg 140 ||||||||||||| |||||| |||||||||| Sbjct: 28619117 gctgggctcccagaggatggtggtctcggcg 28619147
>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete sequence Length = 143681 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 110 gctgggctcccaggggatggaggtctcggcg 140 ||||||||||||| |||||| |||||||||| Sbjct: 121923 gctgggctcccagaggatggtggtctcggcg 121953
>dbj|AB180689.1| Oryza sativa (japonica cultivar-group) OsGS1;3 mRNA for cytosolic glutamine synthetase 1;3, complete cds Length = 1543 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 110 gctgggctcccaggggatggaggtctcggcg 140 ||||||||||||| |||||| |||||||||| Sbjct: 1245 gctgggctcccagaggatggtggtctcggcg 1215
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 450 gacctttactaccagcaccgcgtcgac 476 ||||||||||||||||||||| ||||| Sbjct: 3029292 gacctttactaccagcaccgcctcgac 3029266 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 cgagggcagcctcaagcggctcgg 436 |||||||||||||||||| ||||| Sbjct: 3670142 cgagggcagcctcaagcgcctcgg 3670119
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 279 aacgagatcctcctcggcaaggcgctg 305 ||||||||||| ||||||||||||||| Sbjct: 4002058 aacgagatcctgctcggcaaggcgctg 4002084 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ggcctcggctgcatgggtatg 164 ||||||||||||||||||||| Sbjct: 4001926 ggcctcggctgcatgggtatg 4001946 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 456 tactaccagcaccgcgtcgacaccagggtgcctatcgagg 495 |||||||||||||| |||||| ||| ||||| ||||||| Sbjct: 4002250 tactaccagcaccgtgtcgaccccaacgtgccgatcgagg 4002289
>dbj|AK099290.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127P21, full insert sequence Length = 1457 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 110 gctgggctcccaggggatggaggtctcggcg 140 ||||||||||||| |||||| |||||||||| Sbjct: 1198 gctgggctcccagaggatggtggtctcggcg 1168
>dbj|AK063913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-A09, full insert sequence Length = 1494 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 110 gctgggctcccaggggatggaggtctcggcg 140 ||||||||||||| |||||| |||||||||| Sbjct: 1198 gctgggctcccagaggatggtggtctcggcg 1168
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 450 gacctttactaccagcaccgcgtcga 475 ||||||| |||||||||||||||||| Sbjct: 984686 gaccttttctaccagcaccgcgtcga 984661
>gb|AY026946.3| Streptomyces venezuelae adenylating enzyme CmlK, alkylhalidase CmlS, and aldo/keto reductase CmlT genes, complete cds; and unknown genes Length = 6213 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 458 ctaccagcaccgcgtcgacacc 479 |||||||||||||||||||||| Sbjct: 3590 ctaccagcaccgcgtcgacacc 3611
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 458 ctaccagcaccgcgtcgacaccagggtgcctatcgagg 495 |||||||||||||||||| ||| |||||| ||||||| Sbjct: 519243 ctaccagcaccgcgtcgatcccaaggtgccgatcgagg 519206
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 332 gctggccaccaagttcggcatc 353 |||||||||||||||||||||| Sbjct: 1814036 gctggccaccaagttcggcatc 1814057
>ref|NM_104756.2| Arabidopsis thaliana aldo-keto reductase/ oxidoreductase AT1G60730 transcript variant AT1G60730.1 mRNA, complete cds Length = 1397 Score = 42.1 bits (21), Expect = 2.0 Identities = 78/97 (80%) Strand = Plus / Plus Query: 205 tcgcgctcatccaccacgccgtcgccgccggcgtcaccctgctcgactcctccgatatct 264 |||| ||||||||||||||| | | |||||||||| | || ||| |||||||||||| Sbjct: 195 tcgctctcatccaccacgccattcactccggcgtcactttccttgacacctccgatatct 254 Query: 265 atgggccgcacaccaacgagatcctcctcggcaaggc 301 | || || | ||||||||| | |||||| ||||||| Sbjct: 255 acggtcctgagaccaacgagcttctcctcagcaaggc 291
>ref|NM_202327.1| Arabidopsis thaliana aldo-keto reductase/ oxidoreductase AT1G60730 transcript variant AT1G60730.2 mRNA, complete cds Length = 1401 Score = 42.1 bits (21), Expect = 2.0 Identities = 78/97 (80%) Strand = Plus / Plus Query: 205 tcgcgctcatccaccacgccgtcgccgccggcgtcaccctgctcgactcctccgatatct 264 |||| ||||||||||||||| | | |||||||||| | || ||| |||||||||||| Sbjct: 195 tcgctctcatccaccacgccattcactccggcgtcactttccttgacacctccgatatct 254 Query: 265 atgggccgcacaccaacgagatcctcctcggcaaggc 301 | || || | ||||||||| | |||||| ||||||| Sbjct: 255 acggtcctgagaccaacgagcttctcctcagcaaggc 291
>ref|NM_196521.1| Oryza sativa (japonica cultivar-group) putative polyprotein (OSJNBa0006I13.8), mRNA Length = 1305 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 231 gccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacga 283 |||||||||||| | ||||| |||||||| ||| || |||||||||||||| Sbjct: 151 gccggcgtcaccttcttcgacacctccgatgcctacggcccgcacaccaacga 203
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 cgccgtcgccgccggcgtcaccctg 245 ||||||||||||||||| ||||||| Sbjct: 3937030 cgccgtcgccgccggcgccaccctg 3937006
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 cgccgtcgccgccggcgtcaccctg 245 ||||||||||||||||| ||||||| Sbjct: 126255 cgccgtcgccgccggcgccaccctg 126231
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 cgccgtcgccgccggcgtcaccctg 245 ||||||||||||||||| ||||||| Sbjct: 137120 cgccgtcgccgccggcgccaccctg 137096
>gb|AY124862.1| Arabidopsis thaliana At1g60730/F8A5_24 mRNA, complete cds Length = 1038 Score = 42.1 bits (21), Expect = 2.0 Identities = 78/97 (80%) Strand = Plus / Plus Query: 205 tcgcgctcatccaccacgccgtcgccgccggcgtcaccctgctcgactcctccgatatct 264 |||| ||||||||||||||| | | |||||||||| | || ||| |||||||||||| Sbjct: 128 tcgctctcatccaccacgccattcactccggcgtcactttccttgacacctccgatatct 187 Query: 265 atgggccgcacaccaacgagatcctcctcggcaaggc 301 | || || | ||||||||| | |||||| ||||||| Sbjct: 188 acggtcctgagaccaacgagcttctcctcagcaaggc 224
>gb|AE012487.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 395 of 460 of the complete genome Length = 10967 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 ctggccaccaagttcggcatc 353 ||||||||||||||||||||| Sbjct: 10124 ctggccaccaagttcggcatc 10144
>gb|AF361576.1| Arabidopsis thaliana At1g60730/F8A5_24 mRNA, complete cds Length = 1349 Score = 42.1 bits (21), Expect = 2.0 Identities = 78/97 (80%) Strand = Plus / Plus Query: 205 tcgcgctcatccaccacgccgtcgccgccggcgtcaccctgctcgactcctccgatatct 264 |||| ||||||||||||||| | | |||||||||| | || ||| |||||||||||| Sbjct: 174 tcgctctcatccaccacgccattcactccggcgtcactttccttgacacctccgatatct 233 Query: 265 atgggccgcacaccaacgagatcctcctcggcaaggc 301 | || || | ||||||||| | |||||| ||||||| Sbjct: 234 acggtcctgagaccaacgagcttctcctcagcaaggc 270
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 ctggccaccaagttcggcatc 353 ||||||||||||||||||||| Sbjct: 4427736 ctggccaccaagttcggcatc 4427756
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 231 gccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacga 283 |||||||||||| | ||||| |||||||| ||| || |||||||||||||| Sbjct: 14217841 gccggcgtcaccttcttcgacacctccgatgcctacggcccgcacaccaacga 14217893
>emb|BX815445.1|CNS0ACYE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZE02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1295 Score = 42.1 bits (21), Expect = 2.0 Identities = 78/97 (80%) Strand = Plus / Plus Query: 205 tcgcgctcatccaccacgccgtcgccgccggcgtcaccctgctcgactcctccgatatct 264 |||| ||||||||||||||| | | |||||||||| | || ||| |||||||||||| Sbjct: 148 tcgctctcatccaccacgccattcactccggcgtcactttccttgacacctccgatatct 207 Query: 265 atgggccgcacaccaacgagatcctcctcggcaaggc 301 | || || | ||||||||| | |||||| ||||||| Sbjct: 208 acggtcctgagaccaacgagcttctcctcagcaaggc 244
>gb|AC160516.1| Medicago truncatula chromosome 7 BAC clone mth2-66d22, complete sequence Length = 116154 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 519 cttgtcgaagaaggaaaaataaaatacat 547 ||||| ||||| ||||||||||||||||| Sbjct: 87270 cttgttgaagagggaaaaataaaatacat 87298 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 519 cttgtcgaagaaggaaaaataaaatacat 547 ||||| ||||| ||||||||||||||||| Sbjct: 53340 cttgttgaagagggaaaaataaaatacat 53312 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 504 ggggaactcaagaagcttgtcgaagaaggaaaaataaaatacat 547 ||||| || ||||| || || ||||| ||||||||||||||||| Sbjct: 100598 ggggagcttaagaaactcgttgaagagggaaaaataaaatacat 100555
>gb|AE004681.1| Pseudomonas aeruginosa PAO1, section 242 of 529 of the complete genome Length = 11002 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 144 ggcctcggctgcatgggtatgtccgccttctac 176 ||||||||||||||||| ||| ||| ||||||| Sbjct: 4618 ggcctcggctgcatgggcatgaccgacttctac 4650
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10, complete sequence Length = 142737 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 231 gccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacga 283 |||||||||||| | ||||| |||||||| ||| || |||||||||||||| Sbjct: 89914 gccggcgtcaccttcttcgacacctccgatgcctacggcccgcacaccaacga 89966
>dbj|AK099316.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145C18, full insert sequence Length = 1334 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 231 gccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacga 283 |||||||||||| | ||||| |||||||| ||| || |||||||||||||| Sbjct: 232 gccggcgtcaccttcttcgacacctccgatgcctacggcccgcacaccaacga 284
>dbj|AK064344.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-H09, full insert sequence Length = 1355 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 231 gccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacga 283 |||||||||||| | ||||| |||||||| ||| || |||||||||||||| Sbjct: 247 gccggcgtcaccttcttcgacacctccgatgcctacggcccgcacaccaacga 299
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 231 gccggcgtcaccctgctcgactcctccgatatctatgggccgcacaccaacga 283 |||||||||||| | ||||| |||||||| ||| || |||||||||||||| Sbjct: 14226083 gccggcgtcaccttcttcgacacctccgatgcctacggcccgcacaccaacga 14226135
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 gccgtcgccgccggcgtcaccctg 245 ||||| |||||||||||||||||| Sbjct: 2422523 gccgttgccgccggcgtcaccctg 2422500
>ref|XM_475550.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2316 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 acgccgtcgccgccggcgtc 239 |||||||||||||||||||| Sbjct: 910 acgccgtcgccgccggcgtc 929
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 147 ctcggctgcatgggtatgtccgccttctacgg 178 |||||||||||||| ||||| | ||||||||| Sbjct: 1396628 ctcggctgcatggggatgtcggacttctacgg 1396659
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 tcgccgacggcaagcgggag 377 |||||||||||||||||||| Sbjct: 1502220 tcgccgacggcaagcgggag 1502201
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 aaggaaaaataaaatacatc 548 |||||||||||||||||||| Sbjct: 513433 aaggaaaaataaaatacatc 513414
>gb|AC159443.1| Trypanosoma brucei chromosome 5 clone RPCI93-30H13, complete sequence Length = 152941 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 aaggaaaaataaaatacatc 548 |||||||||||||||||||| Sbjct: 129984 aaggaaaaataaaatacatc 129965
>gb|AY766462.1| Rauvolfia serpentina perakine reductase (PR) mRNA, complete cds Length = 1014 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 502 tgggggaactcaagaagcttgtcgaagaaggaaaaataaa 541 |||| ||||| |||||| | || ||||||||||||||||| Sbjct: 413 tgggtgaacttaagaagttagttgaagaaggaaaaataaa 452
>gb|AC183539.2| Pan troglodytes BAC clone CH251-340H7 from chromosome 15, complete sequence Length = 155024 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 gaagctgggctcccagggga 126 |||||||||||||||||||| Sbjct: 63711 gaagctgggctcccagggga 63692
>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0079L11, complete sequence Length = 124104 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 acgccgtcgccgccggcgtc 239 |||||||||||||||||||| Sbjct: 56901 acgccgtcgccgccggcgtc 56920
>gb|AE008985.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 11 of 256 of the complete sequence Length = 10104 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 239 caccctgctcgactcctccgatatctat 266 ||||||||| || ||||||||||||||| Sbjct: 5954 caccctgctggaatcctccgatatctat 5981
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 ctcctcggcaaggcgctgct 307 |||||||||||||||||||| Sbjct: 1909061 ctcctcggcaaggcgctgct 1909080
>gb|AC137751.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0014E11, complete sequence Length = 199348 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 tcgccgccggcgtcaccctgctcg 249 |||||||||||||| ||||||||| Sbjct: 167736 tcgccgccggcgtcgccctgctcg 167713
>emb|CR962127.1| Medicago truncatula chromosome 5 clone mth2-181n9, COMPLETE SEQUENCE Length = 119528 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 gaagaaggaaaaataaaata 544 |||||||||||||||||||| Sbjct: 88834 gaagaaggaaaaataaaata 88815
>gb|AC016204.12| Homo sapiens chromosome 15, clone RP11-25C1, complete sequence Length = 141447 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 gaagctgggctcccagggga 126 |||||||||||||||||||| Sbjct: 127915 gaagctgggctcccagggga 127896
>gb|AC146856.8| Medicago truncatula clone mth2-16l23, complete sequence Length = 145382 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 gaagaaggaaaaataaaata 544 |||||||||||||||||||| Sbjct: 12281 gaagaaggaaaaataaaata 12262
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 tactaccagcaccgcgtcga 475 |||||||||||||||||||| Sbjct: 3704151 tactaccagcaccgcgtcga 3704132
>gb|AC112216.3| Homo sapiens chromosome 3 clone CTD-2021F6, complete sequence Length = 150140 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 aagaaggaaaaataaaatac 545 |||||||||||||||||||| Sbjct: 81623 aagaaggaaaaataaaatac 81604
>gb|AC116036.3| Homo sapiens chromosome 3 clone RP11-359I18, complete sequence Length = 178119 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 aagaaggaaaaataaaatac 545 |||||||||||||||||||| Sbjct: 164682 aagaaggaaaaataaaatac 164663
>emb|AJ488200.1|PVI488200 Uncultured bacterium gene for putative clp protease, clone 11 Length = 2850 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 gaactcaagaagcttgtcga 526 |||||||||||||||||||| Sbjct: 1669 gaactcaagaagcttgtcga 1688
>gb|AC151907.5| Mus musculus BAC clone RP23-163E23 from chromosome 15, complete sequence Length = 197165 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaaggaaaaataaaataca 546 |||||||||||||||||||| Sbjct: 82196 agaaggaaaaataaaataca 82177
>gb|AC119424.2| Homo sapiens chromosome 3 clone RP11-475O23, complete sequence Length = 208015 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 aagaaggaaaaataaaatac 545 |||||||||||||||||||| Sbjct: 5363 aagaaggaaaaataaaatac 5344
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 129 gaggtctcggcgcagggcctcggctgcatggg 160 ||||| ||||||| ||| |||||||||||||| Sbjct: 5465012 gaggtttcggcgctggggctcggctgcatggg 5464981 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 262 tctatgggccgcacaccaacgagatcctcctcggcaaggcgctg 305 ||||||| ||| ||||||||||| ||| |||||| |||||||| Sbjct: 5464879 tctatggtccgttcaccaacgagaacctgctcggcgaggcgctg 5464836
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 450 gacctttactaccagcaccgcgtcgacaccagggtgcctatcga 493 ||||| |||||||| |||||||||||| ||| ||||| ||||| Sbjct: 656932 gacctgtactaccaacaccgcgtcgaccccaacgtgccgatcga 656889
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 cggcaagcgggaggttcgcg 384 |||||||||||||||||||| Sbjct: 71606 cggcaagcgggaggttcgcg 71625
>ref|NM_141458.2| Drosophila melanogaster rotund CG32466-RA, transcript variant A (rn), mRNA Length = 3661 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ccaccacgccgtcgccgccg 234 |||||||||||||||||||| Sbjct: 1809 ccaccacgccgtcgccgccg 1828
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 239 caccctgctcgactcctccgatatctat 266 ||||||||| || ||||||||||||||| Sbjct: 117640 caccctgctggaatcctccgatatctat 117667
>gb|AC092438.5| Homo sapiens BAC clone RP11-367M19 from 4, complete sequence Length = 67683 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 aagaaggaaaaataaaatac 545 |||||||||||||||||||| Sbjct: 64779 aagaaggaaaaataaaatac 64798
>gb|AF395905.1|AF395905 Drosophila melanogaster rotund mRNA, complete cds Length = 3658 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ccaccacgccgtcgccgccg 234 |||||||||||||||||||| Sbjct: 1806 ccaccacgccgtcgccgccg 1825
>gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, complete sequence Length = 120787 Score = 40.1 bits (20), Expect = 7.8 Identities = 77/96 (80%) Strand = Plus / Minus Query: 205 tcgcgctcatccaccacgccgtcgccgccggcgtcaccctgctcgactcctccgatatct 264 |||| ||||||||||||||| | | |||||||||| | || ||| |||||||||||| Sbjct: 83945 tcgctctcatccaccacgccattcactccggcgtcactttccttgacacctccgatatct 83886 Query: 265 atgggccgcacaccaacgagatcctcctcggcaagg 300 | || || | ||||||||| | |||||| |||||| Sbjct: 83885 acggtcctgagaccaacgagcttctcctcagcaagg 83850
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 tcgccgccggcgtcaccctgctcg 249 |||||||||||||| ||||||||| Sbjct: 25038688 tcgccgccggcgtcgccctgctcg 25038665
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 ccaccacgccgtcgccgccg 234 |||||||||||||||||||| Sbjct: 1288437 ccaccacgccgtcgccgccg 1288418
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 acgccgtcgccgccggcgtc 239 |||||||||||||||||||| Sbjct: 17581475 acgccgtcgccgccggcgtc 17581456
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 acgccgtcgccgccggcgtc 239 |||||||||||||||||||| Sbjct: 1395239 acgccgtcgccgccggcgtc 1395258
>gb|AC008226.10|AC008226 Drosophila melanogaster, chromosome 3R, region 84D-84D, BAC clone BACR02B19, complete sequence Length = 171286 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 ccaccacgccgtcgccgccg 234 |||||||||||||||||||| Sbjct: 8012 ccaccacgccgtcgccgccg 7993
>emb|BX826452.1|CNS0A3Z8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB27ZH05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1366 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 agaagcttgtcgaagaagga 533 |||||||||||||||||||| Sbjct: 1031 agaagcttgtcgaagaagga 1012
>gb|AC008029.3|AC008029 Drosophila melanogaster, chromosome 3R, region 84D-84D, BAC clone BACR01C11, complete sequence Length = 176991 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 ccaccacgccgtcgccgccg 234 |||||||||||||||||||| Sbjct: 154383 ccaccacgccgtcgccgccg 154364
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 ggcctcggctgcatgggtatgtcc 167 ||||||||||||||||| |||||| Sbjct: 6816720 ggcctcggctgcatgggcatgtcc 6816743
>gb|AF546155.1| Streptomyces macromomyceticus UnbL (unbL), UnbV (unbV), UnbU (unbU), PksE (pksE), and TebC (tebC) genes, complete cds Length = 10514 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 412 gcgagggcagcctcaagcggctcg 435 |||||||||||||||||| ||||| Sbjct: 8177 gcgagggcagcctcaagctgctcg 8200
>ref|XM_216459.3| PREDICTED: Rattus norvegicus similar to hypothetical protein (LOC298301), mRNA Length = 3981 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gcgtgagggagagggtagagctgg 336 ||||| |||||||||||||||||| Sbjct: 1355 gcgtgcgggagagggtagagctgg 1378
>gb|AC055876.16| Homo sapiens chromosome 15, clone RP11-578F21, complete sequence Length = 192533 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gaagctgggctcccagggga 126 |||||||||||||||||||| Sbjct: 185472 gaagctgggctcccagggga 185491
>gb|AC091951.3| Homo sapiens chromosome 5 clone RP11-404K5, complete sequence Length = 160174 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 gaagctgggctcccagggga 126 |||||||||||||||||||| Sbjct: 38277 gaagctgggctcccagggga 38258
>dbj|AP005884.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0598D02 Length = 155238 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 ccaccacgccgtcgccgccg 234 |||||||||||||||||||| Sbjct: 59441 ccaccacgccgtcgccgccg 59422
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 ccaccacgccgtcgccgccg 234 |||||||||||||||||||| Sbjct: 1545023 ccaccacgccgtcgccgccg 1545004
>dbj|AP005789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0563F09 Length = 174905 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 ccaccacgccgtcgccgccg 234 |||||||||||||||||||| Sbjct: 119311 ccaccacgccgtcgccgccg 119292
>dbj|AP005479.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0045A07 Length = 174165 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 acgccgtcgccgccggcgtc 239 |||||||||||||||||||| Sbjct: 109424 acgccgtcgccgccggcgtc 109405
>dbj|AK120637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K02, full insert sequence Length = 2511 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 acgccgtcgccgccggcgtc 239 |||||||||||||||||||| Sbjct: 920 acgccgtcgccgccggcgtc 939
>gb|AC156502.2| Mus musculus BAC clone RP23-355N1 from 9, complete sequence Length = 204883 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 ggctcccaggggatggaggt 133 |||||||||||||||||||| Sbjct: 22682 ggctcccaggggatggaggt 22701
>gb|AE003672.4| Drosophila melanogaster chromosome 3R, section 12 of 118 of the complete sequence Length = 301379 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 ccaccacgccgtcgccgccg 234 |||||||||||||||||||| Sbjct: 205792 ccaccacgccgtcgccgccg 205773
>gb|AC108404.8| Mus musculus chromosome 18, clone RP24-491I16, complete sequence Length = 196638 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 tcgaagaaggaaaaataaaa 542 |||||||||||||||||||| Sbjct: 161743 tcgaagaaggaaaaataaaa 161762
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 450 gacctttactaccagcaccgcgtcgacaccagggtgcctatcga 493 ||||| |||||||| |||||||||||| ||| ||||| ||||| Sbjct: 684972 gacctgtactaccaacaccgcgtcgaccccaacgtgccgatcga 684929
>gb|AC104328.10| Mus musculus strain C57BL/6J chromosome 18 clone rp23-352p20, complete sequence Length = 183187 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 tcgaagaaggaaaaataaaa 542 |||||||||||||||||||| Sbjct: 173011 tcgaagaaggaaaaataaaa 172992
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ccaccacgccgtcgccgccg 234 |||||||||||||||||||| Sbjct: 2505028 ccaccacgccgtcgccgccg 2505047 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 445 gcattgacctttactaccagcaccgcgtcgac 476 |||| ||||| ||||||||||||||| ||||| Sbjct: 1915567 gcatcgacctgtactaccagcaccgcctcgac 1915536
>emb|CT033793.10| Mouse DNA sequence from clone RP23-21O10 on chromosome 9, complete sequence Length = 212761 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 ggctcccaggggatggaggt 133 |||||||||||||||||||| Sbjct: 40741 ggctcccaggggatggaggt 40760
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 tcgccgccggcgtcaccctgctcg 249 |||||||||||||| ||||||||| Sbjct: 25350278 tcgccgccggcgtcgccctgctcg 25350255
>gb|AC135113.4| Mus musculus BAC clone RP24-63N7 from 15, complete sequence Length = 173656 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaaggaaaaataaaataca 546 |||||||||||||||||||| Sbjct: 48698 agaaggaaaaataaaataca 48717
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cccaacaccagcgggagcac 58 |||||||||||||||||||| Sbjct: 3528394 cccaacaccagcgggagcac 3528375
>emb|AL645508.14| Mouse DNA sequence from clone RP23-170H12 on chromosome 4, complete sequence Length = 207485 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 gaaggaaaaataaaatacat 547 |||||||||||||||||||| Sbjct: 9624 gaaggaaaaataaaatacat 9643
>gb|AC011767.12| Homo sapiens chromosome 15, clone RP11-26F2, complete sequence Length = 180233 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 gaagctgggctcccagggga 126 |||||||||||||||||||| Sbjct: 126882 gaagctgggctcccagggga 126863 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,914,924 Number of Sequences: 3902068 Number of extensions: 4914924 Number of successful extensions: 120969 Number of sequences better than 10.0: 119 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 116360 Number of HSP's gapped (non-prelim): 4607 length of query: 575 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 552 effective length of database: 17,143,297,704 effective search space: 9463100332608 effective search space used: 9463100332608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
