ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart55c04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121568.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035C24, full insert sequence Length = 2015 Score = 385 bits (194), Expect = e-103 Identities = 371/430 (86%) Strand = Plus / Plus Query: 85 cgccatggcgatcaccgcccaggtccccgacatcatgggcgagcgccagtccggccagga 144 |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| Sbjct: 94 cgccatggcgatcaccgcccagacccccgacatcctcggcgagcgccagtccggccagga 153 Query: 145 cgtccgcacccagaacgtatcggcgtgccaggcggtggccaacatcgtcaagtcctcgct 204 ||||||||| || ||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 154 cgtccgcacgcaaaacgtggtggcgtgccaggcggtggccaacatcgttaagtcctcgct 213 Query: 205 cggccccgtcgggctcgacaagatgctcgtggatgacattggcgatgtcacgatcacgaa 264 || ||||| ||||||||||||||||| |||||||| ||||| ||||| || || || || Sbjct: 214 tgggcccgtggggctcgacaagatgcttgtggatgatattggtgatgttaccataacaaa 273 Query: 265 tgacggagccaccattctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgt 324 ||| ||||| |||||| |||||||| |||| ||||||||||| || || |||||||| || Sbjct: 274 tgatggagcaaccattttgaggatgttggaagtcgagcatccagcagccaaggttcttgt 333 Query: 325 ggaattggctgagctccaagaccgggaggttggagatggaactacctctgttgttatcat 384 || ||||||||||| |||||| | ||||| ||||||||||| || |||||||| || || Sbjct: 334 tgagttggctgagcttcaagacagagaggtgggagatggaacgacatctgttgtgataat 393 Query: 385 cgctgcagagttgctcaagagagccaatgatcttgtgaggaataagattcacccgacctc 444 || ||||| ||||| ||| | | ||||||||||||||| || || || || ||||| || Sbjct: 394 agccgcagaattgctaaagcggggcaatgatcttgtgagaaacaaaatccatccgacatc 453 Query: 445 tattattagtggctacaggcttgctatgcgtgaagcatgcaagtatgtggaggaaaagct 504 |||||| ||||||||||||||||||||||||||||| ||||| ||||| || |||||| | Sbjct: 454 tattatcagtggctacaggcttgctatgcgtgaagcttgcaaatatgttgaagaaaagtt 513 Query: 505 gtctgtcaag 514 | |||||||| Sbjct: 514 ggctgtcaag 523
>ref|XM_473432.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1638 Score = 377 bits (190), Expect = e-101 Identities = 367/426 (86%) Strand = Plus / Plus Query: 89 atggcgatcaccgcccaggtccccgacatcatgggcgagcgccagtccggccaggacgtc 148 |||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 1 atggcgatcaccgcccagacccccgacatcctcggcgagcgccagtccggccaggacgtc 60 Query: 149 cgcacccagaacgtatcggcgtgccaggcggtggccaacatcgtcaagtcctcgctcggc 208 ||||| || ||||| ||||||||||||||||||||||||||| ||||||||||| || Sbjct: 61 cgcacgcaaaacgtggtggcgtgccaggcggtggccaacatcgttaagtcctcgcttggg 120 Query: 209 cccgtcgggctcgacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgac 268 ||||| ||||||||||||||||| |||||||| ||||| ||||| || || || ||||| Sbjct: 121 cccgtggggctcgacaagatgcttgtggatgatattggtgatgttaccataacaaatgat 180 Query: 269 ggagccaccattctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaa 328 ||||| |||||| |||||||| |||| ||||||||||| || || |||||||| || || Sbjct: 181 ggagcaaccattttgaggatgttggaagtcgagcatccagcagccaaggttcttgttgag 240 Query: 329 ttggctgagctccaagaccgggaggttggagatggaactacctctgttgttatcatcgct 388 ||||||||||| |||||| | ||||| ||||||||||| || |||||||| || || || Sbjct: 241 ttggctgagcttcaagacagagaggtgggagatggaacgacatctgttgtgataatagcc 300 Query: 389 gcagagttgctcaagagagccaatgatcttgtgaggaataagattcacccgacctctatt 448 ||||| ||||| ||| | | ||||||||||||||| || || || || ||||| |||||| Sbjct: 301 gcagaattgctaaagcggggcaatgatcttgtgagaaacaaaatccatccgacatctatt 360 Query: 449 attagtggctacaggcttgctatgcgtgaagcatgcaagtatgtggaggaaaagctgtct 508 || ||||||||||||||||||||||||||||| ||||| ||||| || |||||| || || Sbjct: 361 atcagtggctacaggcttgctatgcgtgaagcttgcaaatatgttgaagaaaagttggct 420 Query: 509 gtcaag 514 |||||| Sbjct: 421 gtcaag 426
>gb|AY104154.1| Zea mays PCO140702 mRNA sequence Length = 2014 Score = 369 bits (186), Expect = 6e-99 Identities = 368/426 (86%), Gaps = 2/426 (0%) Strand = Plus / Plus Query: 78 ccgccgccgccatggcgatcaccgc-ccaggtccccgacatcatgggcgagcgccagtcc 136 ||||||| |||||||||||||| || ||| | ||||||||| | ||||||||||||||| Sbjct: 104 ccgccgcagccatggcgatcacagcgccaact-cccgacatcctcggcgagcgccagtcc 162 Query: 137 ggccaggacgtccgcacccagaacgtatcggcgtgccaggcggtggccaacatcgtcaag 196 ||||||||||||||||| |||||||| ||| ||| ||||||||||||||||||||| Sbjct: 163 ggccaggacgtccgcacgcagaacgtgatggcttgcggggcggtggccaacatcgtcaaa 222 Query: 197 tcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacattggcgatgtcacg 256 ||||||||||||||||| || |||||||||||||| ||||| || ||||| ||||| || Sbjct: 223 tcctcgctcggccccgttggtctcgacaagatgctagtggacgatattggtgatgttaca 282 Query: 257 atcacgaatgacggagccaccattctgaggatgctggaggtcgagcatcccgcggcaaag 316 ||||| ||||| ||||| ||||| || | |||| |||| || |||||||| || || ||| Sbjct: 283 atcactaatgatggagcaaccatacttaagatgttggaagttgagcatccagccgccaag 342 Query: 317 gttctcgtggaattggctgagctccaagaccgggaggttggagatggaactacctctgtt 376 ||||| || || ||||||||||||||||| || ||||| |||||||||||||| || ||| Sbjct: 343 gttcttgttgagttggctgagctccaagatcgtgaggtaggagatggaactacttccgtt 402 Query: 377 gttatcatcgctgcagagttgctcaagagagccaatgatcttgtgaggaataagattcac 436 || ||||| || |||||||| |||||||||||||| |||||||||| ||||||||| || Sbjct: 403 gtcatcatagcggcagagttactcaagagagccaacgatcttgtgaagaataagatccat 462 Query: 437 ccgacctctattattagtggctacaggcttgctatgcgtgaagcatgcaagtatgtggag 496 || |||||||| || ||||||||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 463 ccaacctctataatcagtggctacaggcttgctatgcgtgaagcctgcaaatatgttgag 522 Query: 497 gaaaag 502 |||||| Sbjct: 523 gaaaag 528
>dbj|AB073552.1| Bruguiera sexangula bstcp-1 mRNA for t-complex polypeptide 1, complete cds Length = 2060 Score = 236 bits (119), Expect = 6e-59 Identities = 308/371 (83%) Strand = Plus / Plus Query: 122 ggcgagcgccagtccggccaggacgtccgcacccagaacgtatcggcgtgccaggcggtg 181 ||||| || ||||||||||||||||||||||| || || || ||| || || ||||| Sbjct: 114 ggcgaacgtcagtccggccaggacgtccgcactcaaaatgtggtggcatgtcaagcggtt 173 Query: 182 gccaacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgac 241 ||||| || ||||| || || || || || ||||| |||||||||||||| |||||||| Sbjct: 174 gccaatattgtcaaatcttcacttggtcctgtcggactcgacaagatgctagtggatgat 233 Query: 242 attggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctggaggtcgag 301 ||||| ||||| || || || ||||| || || || ||||| | |||| | || || ||| Sbjct: 234 attggtgatgtaacaattacaaatgatggtgctacgattcttaagatgttagaagtagag 293 Query: 302 catcccgcggcaaaggttctcgtggaattggctgagctccaagaccgggaggttggagat 361 ||||| || |||||||| |||||||| ||||||||||| |||||||| || ||||||||| Sbjct: 294 catcctgcagcaaaggtgctcgtggagttggctgagcttcaagaccgagaagttggagat 353 Query: 362 ggaactacctctgttgttatcatcgctgcagagttgctcaagagagccaatgatcttgtg 421 ||||| || || ||||| ||||| || || ||||||||||||||||| |||||||| ||| Sbjct: 354 ggaaccacttcggttgtcatcatagcagctgagttgctcaagagagcaaatgatctcgtg 413 Query: 422 aggaataagattcacccgacctctattattagtggctacaggcttgctatgcgtgaagca 481 ||||||||||| ||||| || || || || ||||| ||||||||||||||| | |||||| Sbjct: 414 aggaataagatccacccaacatcaataatcagtggatacaggcttgctatgagggaagca 473 Query: 482 tgcaagtatgt 492 ||||||||||| Sbjct: 474 tgcaagtatgt 484
>gb|BT012800.1| Lycopersicon esculentum clone 113815R, mRNA sequence Length = 2210 Score = 129 bits (65), Expect = 1e-26 Identities = 254/317 (80%) Strand = Plus / Plus Query: 185 aacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacatt 244 ||||||||||| || ||||| || || || || || || ||||||||||| ||||| ||| Sbjct: 233 aacatcgtcaaatcttcgcttggacctgttggccttgataagatgctcgttgatgatatt 292 Query: 245 ggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctggaggtcgagcat 304 |||||||| || || || ||||| || || || |||||||||||| | || || |||||| Sbjct: 293 ggcgatgtaacaattactaatgatggtgctacaattctgaggatgttagaagttgagcat 352 Query: 305 cccgcggcaaaggttctcgtggaattggctgagctccaagaccgggaggttggagatgga 364 || || || |||||||| || || |||||||| || ||||| || || ||||| |||||| Sbjct: 353 ccagctgccaaggttcttgttgagttggctgaacttcaagatcgagaagttggtgatgga 412 Query: 365 actacctctgttgttatcatcgctgcagagttgctcaagagagccaatgatcttgtgagg 424 || ||||| |||||||| || |||||||| ||||| ||| |||| ||||| | ||||| Sbjct: 413 acaacctcagttgttattatagctgcagaattgcttaagggagcaaatgagttggtgaga 472 Query: 425 aataagattcacccgacctctattattagtggctacaggcttgctatgcgtgaagcatgc 484 | || |||||||| ||||| || || ||||| || ||||| || ||| | ||||||||| Sbjct: 473 cacaaaattcacccaacctcgatcatcagtggatataggctagcaatgagggaagcatgc 532 Query: 485 aagtatgtggaggaaaa 501 || ||||| || ||||| Sbjct: 533 aaatatgttgaagaaaa 549
>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02, complete sequence Length = 173522 Score = 105 bits (53), Expect = 1e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 85 cgccatggcgatcaccgcccaggtccccgacatcatgggcgagcgccagtccggccagga 144 |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| Sbjct: 42064 cgccatggcgatcaccgcccagacccccgacatcctcggcgagcgccagtccggccagga 42123 Query: 145 cgtccgcac 153 ||||||||| Sbjct: 42124 cgtccgcac 42132 Score = 89.7 bits (45), Expect = 8e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 166 ggcgtgccaggcggtggccaacatcgtcaagtcctcgctcggccccgtcgggctcgacaa 225 ||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 42279 ggcgtgccaggcggtggccaacatcgttaagtcctcgcttgggcccgtggggctcgacaa 42338 Query: 226 g 226 | Sbjct: 42339 g 42339 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 225 agatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctga 284 ||||||| |||||||| ||||| ||||| || || || ||||| ||||| |||||| ||| Sbjct: 42733 agatgcttgtggatgatattggtgatgttaccataacaaatgatggagcaaccattttga 42792 Query: 285 ggatgctggaggtcgagcatcc 306 ||||| |||| ||||||||||| Sbjct: 42793 ggatgttggaagtcgagcatcc 42814 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 315 aggttctcgtggaattggctgagctccaagaccgggaggttggagatggaactacctctg 374 ||||||| || || ||||||||||| |||||| | ||||| ||||||||||| || |||| Sbjct: 42911 aggttcttgttgagttggctgagcttcaagacagagaggtgggagatggaacgacatctg 42970 Query: 375 ttgttatcatcgctgcagagttgct 399 |||| || || || ||||| ||||| Sbjct: 42971 ttgtgataatagccgcagaattgct 42995 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 463 gcttgctatgcgtgaagcatgcaagtatgtggaggaaaagctgtctgtcaag 514 |||||||||||||||||| ||||| ||||| || |||||| || |||||||| Sbjct: 43266 gcttgctatgcgtgaagcttgcaaatatgttgaagaaaagttggctgtcaag 43317 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 409 caatgatcttgtgaggaataagattcacccgacctctattattagtggctacagg 463 ||||||||||||||| || || || || ||||| |||||||| |||||||||||| Sbjct: 43103 caatgatcttgtgagaaacaaaatccatccgacatctattatcagtggctacagg 43157
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 105 bits (53), Expect = 1e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 85 cgccatggcgatcaccgcccaggtccccgacatcatgggcgagcgccagtccggccagga 144 |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| Sbjct: 27611435 cgccatggcgatcaccgcccagacccccgacatcctcggcgagcgccagtccggccagga 27611494 Query: 145 cgtccgcac 153 ||||||||| Sbjct: 27611495 cgtccgcac 27611503 Score = 89.7 bits (45), Expect = 8e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 166 ggcgtgccaggcggtggccaacatcgtcaagtcctcgctcggccccgtcgggctcgacaa 225 ||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 27611650 ggcgtgccaggcggtggccaacatcgttaagtcctcgcttgggcccgtggggctcgacaa 27611709 Query: 226 g 226 | Sbjct: 27611710 g 27611710 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 225 agatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctga 284 ||||||| |||||||| ||||| ||||| || || || ||||| ||||| |||||| ||| Sbjct: 27612104 agatgcttgtggatgatattggtgatgttaccataacaaatgatggagcaaccattttga 27612163 Query: 285 ggatgctggaggtcgagcatcc 306 ||||| |||| ||||||||||| Sbjct: 27612164 ggatgttggaagtcgagcatcc 27612185 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 315 aggttctcgtggaattggctgagctccaagaccgggaggttggagatggaactacctctg 374 ||||||| || || ||||||||||| |||||| | ||||| ||||||||||| || |||| Sbjct: 27612282 aggttcttgttgagttggctgagcttcaagacagagaggtgggagatggaacgacatctg 27612341 Query: 375 ttgttatcatcgctgcagagttgct 399 |||| || || || ||||| ||||| Sbjct: 27612342 ttgtgataatagccgcagaattgct 27612366 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 463 gcttgctatgcgtgaagcatgcaagtatgtggaggaaaagctgtctgtcaag 514 |||||||||||||||||| ||||| ||||| || |||||| || |||||||| Sbjct: 27612637 gcttgctatgcgtgaagcttgcaaatatgttgaagaaaagttggctgtcaag 27612688 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 409 caatgatcttgtgaggaataagattcacccgacctctattattagtggctacagg 463 ||||||||||||||| || || || || ||||| |||||||| |||||||||||| Sbjct: 27612474 caatgatcttgtgagaaacaaaatccatccgacatctattatcagtggctacagg 27612528
>ref|NM_112896.2| Arabidopsis thaliana ATTCP-1; ATP binding / protein binding AT3G20050 (ATTCP-1) mRNA, complete cds Length = 2063 Score = 85.7 bits (43), Expect = 1e-13 Identities = 166/207 (80%) Strand = Plus / Plus Query: 209 cccgtcgggctcgacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgac 268 |||||||| |||||||||||| | |||||||| ||||| ||||| || || || ||||| Sbjct: 256 cccgtcggcctcgacaagatgttggtggatgatattggtgatgtgactattacaaatgat 315 Query: 269 ggagccaccattctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaa 328 || || || ||||| |||||| ||||||||||||| || || || |||||||| || || Sbjct: 316 ggtgctactattcttaggatgttggaggtcgagcaccctgctgctaaggttcttgtcgag 375 Query: 329 ttggctgagctccaagaccgggaggttggagatggaactacctctgttgttatcatcgct 388 || ||||| || ||||| | || || || ||||| ||||| ||||||||||| | ||| Sbjct: 376 ttagctgaacttcaagatagagaagtcggtgatgggactacatctgttgttattgtagct 435 Query: 389 gcagagttgctcaagagagccaatgat 415 || |||||| | ||||| || |||||| Sbjct: 436 gctgagttgttgaagagggcaaatgat 462
>emb|BX823612.1|CNS0A4WG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZH05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1961 Score = 85.7 bits (43), Expect = 1e-13 Identities = 166/207 (80%) Strand = Plus / Plus Query: 209 cccgtcgggctcgacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgac 268 |||||||| |||||||||||| | |||||||| ||||| ||||| || || || ||||| Sbjct: 240 cccgtcggcctcgacaagatgttggtggatgatattggtgatgtgactattacaaatgat 299 Query: 269 ggagccaccattctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaa 328 || || || ||||| |||||| ||||||||||||| || || || |||||||| || || Sbjct: 300 ggtgctactattcttaggatgttggaggtcgagcaccctgctgctaaggttcttgtcgag 359 Query: 329 ttggctgagctccaagaccgggaggttggagatggaactacctctgttgttatcatcgct 388 || ||||| || ||||| | || || || ||||| ||||| ||||||||||| | ||| Sbjct: 360 ttagctgaacttcaagatagagaagtcggtgatgggactacatctgttgttattgtagct 419 Query: 389 gcagagttgctcaagagagccaatgat 415 || |||||| | ||||| || |||||| Sbjct: 420 gctgagttgttgaagagggcaaatgat 446
>dbj|D11351.1|ATHTCP1H A. thaliana mRNA for t-complex polypeptide 1 homologue, complete cds Length = 2024 Score = 85.7 bits (43), Expect = 1e-13 Identities = 166/207 (80%) Strand = Plus / Plus Query: 209 cccgtcgggctcgacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgac 268 |||||||| |||||||||||| | |||||||| ||||| ||||| || || || ||||| Sbjct: 255 cccgtcggcctcgacaagatgttggtggatgatattggtgatgtgactattacaaatgat 314 Query: 269 ggagccaccattctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaa 328 || || || ||||| |||||| ||||||||||||| || || || |||||||| || || Sbjct: 315 ggtgctactattcttaggatgttggaggtcgagcaccctgctgctaaggttcttgtcgag 374 Query: 329 ttggctgagctccaagaccgggaggttggagatggaactacctctgttgttatcatcgct 388 || ||||| || ||||| | || || || ||||| ||||| ||||||||||| | ||| Sbjct: 375 ttagctgaacttcaagatagagaagtcggtgatgggactacatctgttgttattgtagct 434 Query: 389 gcagagttgctcaagagagccaatgat 415 || |||||| | ||||| || |||||| Sbjct: 435 gctgagttgttgaagagggcaaatgat 461
>gb|BT002052.1| Arabidopsis thaliana t-complex polypeptide 1 homologue (At3g20050) mRNA, complete cds Length = 2022 Score = 85.7 bits (43), Expect = 1e-13 Identities = 166/207 (80%) Strand = Plus / Plus Query: 209 cccgtcgggctcgacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgac 268 |||||||| |||||||||||| | |||||||| ||||| ||||| || || || ||||| Sbjct: 254 cccgtcggcctcgacaagatgttggtggatgatattggtgatgtgactattacaaatgat 313 Query: 269 ggagccaccattctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaa 328 || || || ||||| |||||| ||||||||||||| || || || |||||||| || || Sbjct: 314 ggtgctactattcttaggatgttggaggtcgagcaccctgctgctaaggttcttgtcgag 373 Query: 329 ttggctgagctccaagaccgggaggttggagatggaactacctctgttgttatcatcgct 388 || ||||| || ||||| | || || || ||||| ||||| ||||||||||| | ||| Sbjct: 374 ttagctgaacttcaagatagagaagtcggtgatgggactacatctgttgttattgtagct 433 Query: 389 gcagagttgctcaagagagccaatgat 415 || |||||| | ||||| || |||||| Sbjct: 434 gctgagttgttgaagagggcaaatgat 460
>gb|BT021103.1| Arabidopsis thaliana At3g20050 gene, complete cds Length = 1718 Score = 85.7 bits (43), Expect = 1e-13 Identities = 166/207 (80%) Strand = Plus / Plus Query: 209 cccgtcgggctcgacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgac 268 |||||||| |||||||||||| | |||||||| ||||| ||||| || || || ||||| Sbjct: 172 cccgtcggcctcgacaagatgttggtggatgatattggtgatgtgactattacaaatgat 231 Query: 269 ggagccaccattctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaa 328 || || || ||||| |||||| ||||||||||||| || || || |||||||| || || Sbjct: 232 ggtgctactattcttaggatgttggaggtcgagcaccctgctgctaaggttcttgtcgag 291 Query: 329 ttggctgagctccaagaccgggaggttggagatggaactacctctgttgttatcatcgct 388 || ||||| || ||||| | || || || ||||| ||||| ||||||||||| | ||| Sbjct: 292 ttagctgaacttcaagatagagaagtcggtgatgggactacatctgttgttattgtagct 351 Query: 389 gcagagttgctcaagagagccaatgat 415 || |||||| | ||||| || |||||| Sbjct: 352 gctgagttgttgaagagggcaaatgat 378
>gb|BC044397.1| Danio rerio t-complex polypeptide 1, mRNA (cDNA clone MGC:55424 IMAGE:2639388), complete cds Length = 1951 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 185 aacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacatt 244 |||||||| ||| ||| ||||| |||||||| | ||||||||| | ||||||||||| Sbjct: 153 aacatcgtgaagagctctctcggtcccgtcggattggacaagatgttggtggatgacatc 212 Query: 245 ggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctggaggtcga 300 || || || || ||||| |||||||| |||||||| |||| | ||||||||||||| Sbjct: 213 ggagacgtgaccatcaccaatgacggggccaccatcctgaagctgctggaggtcga 268
>ref|NM_131230.1| Danio rerio t-complex polypeptide 1 (tcp1), mRNA Length = 1897 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 185 aacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacatt 244 |||||||| ||| ||| ||||| |||||||| | ||||||||| | ||||||||||| Sbjct: 95 aacatcgtgaagagctctctcggtcccgtcggattggacaagatgttggtggatgacatc 154 Query: 245 ggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctggaggtcga 300 || || || || ||||| |||||||| |||||||| |||| | ||||||||||||| Sbjct: 155 ggagacgtgaccatcaccaatgacggggccaccatcctgaagctgctggaggtcga 210
>gb|AF143493.1|AF143493 Danio rerio t-complex polypeptide 1 (TCP1) mRNA, complete cds Length = 1897 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 185 aacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacatt 244 |||||||| ||| ||| ||||| |||||||| | ||||||||| | ||||||||||| Sbjct: 95 aacatcgtgaagagctctctcggtcccgtcggattggacaagatgttggtggatgacatc 154 Query: 245 ggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctggaggtcga 300 || || || || ||||| |||||||| |||||||| |||| | ||||||||||||| Sbjct: 155 ggagacgtgaccatcaccaatgacggggccaccatcctgaagctgctggaggtcga 210
>ref|XM_752333.1| Ustilago maydis 521 hypothetical protein (UM01279.1) partial mRNA Length = 1677 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 182 gccaacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgac 241 |||||||| ||||| || || ||||| ||||| || ||||||||||||||||| |||||| Sbjct: 112 gccaacattgtcaaatcttccctcggtcccgtaggactcgacaagatgctcgtcgatgac 171 Query: 242 attggcgatgtcac 255 || || |||||||| Sbjct: 172 atcggagatgtcac 185
>gb|AY118416.1| Drosophila melanogaster RE70560 full insert cDNA Length = 1992 Score = 67.9 bits (34), Expect = 3e-08 Identities = 130/162 (80%) Strand = Plus / Plus Query: 221 gacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccatt 280 ||||||||||| ||||| ||||| ||||||||||| | || || || |||||||||||| Sbjct: 237 gacaagatgctggtggacgacatcggcgatgtcacagtgaccaacgatggagccaccatt 296 Query: 281 ctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaattggctgagctc 340 ||| | |||||||||| ||||| || || || ||||| || || || ||||| |||| Sbjct: 297 ctgcgactgctggaggtggagcacccggcagccaaggtcctggttgagctggctcagctg 356 Query: 341 caagaccgggaggttggagatggaactacctctgttgttatc 382 || ||| |||||| || ||||| |||||||| || |||||| Sbjct: 357 caggacgaggaggtcggcgatggcactacctcggtggttatc 398
>ref|NM_170016.1| Drosophila melanogaster Tcp1-like CG5374-RB, transcript variant B (T-cp1), mRNA Length = 1928 Score = 67.9 bits (34), Expect = 3e-08 Identities = 130/162 (80%) Strand = Plus / Plus Query: 221 gacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccatt 280 ||||||||||| ||||| ||||| ||||||||||| | || || || |||||||||||| Sbjct: 169 gacaagatgctggtggacgacatcggcgatgtcacagtgaccaacgatggagccaccatt 228 Query: 281 ctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaattggctgagctc 340 ||| | |||||||||| ||||| || || || ||||| || || || ||||| |||| Sbjct: 229 ctgcgactgctggaggtggagcacccggcagccaaggtcctggttgagctggctcagctg 288 Query: 341 caagaccgggaggttggagatggaactacctctgttgttatc 382 || ||| |||||| || ||||| |||||||| || |||||| Sbjct: 289 caggacgaggaggtcggcgatggcactacctcggtggttatc 330
>ref|NM_079726.3| Drosophila melanogaster Tcp1-like CG5374-RA, transcript variant A (T-cp1), mRNA Length = 1992 Score = 67.9 bits (34), Expect = 3e-08 Identities = 130/162 (80%) Strand = Plus / Plus Query: 221 gacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccatt 280 ||||||||||| ||||| ||||| ||||||||||| | || || || |||||||||||| Sbjct: 233 gacaagatgctggtggacgacatcggcgatgtcacagtgaccaacgatggagccaccatt 292 Query: 281 ctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaattggctgagctc 340 ||| | |||||||||| ||||| || || || ||||| || || || ||||| |||| Sbjct: 293 ctgcgactgctggaggtggagcacccggcagccaaggtcctggttgagctggctcagctg 352 Query: 341 caagaccgggaggttggagatggaactacctctgttgttatc 382 || ||| |||||| || ||||| |||||||| || |||||| Sbjct: 353 caggacgaggaggtcggcgatggcactacctcggtggttatc 394
>gb|M21159.1|DROTCP1 D.melanogaster T complex protein 1 (Tcp-1) mRNA, complete cds Length = 1928 Score = 67.9 bits (34), Expect = 3e-08 Identities = 130/162 (80%) Strand = Plus / Plus Query: 221 gacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccatt 280 ||||||||||| ||||| ||||| ||||||||||| | || || || |||||||||||| Sbjct: 175 gacaagatgctggtggacgacatcggcgatgtcacagtgaccaacgatggagccaccatt 234 Query: 281 ctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaattggctgagctc 340 ||| | |||||||||| ||||| || || || ||||| || || || ||||| |||| Sbjct: 235 ctgcgactgctggaggtggagcacccggcagccaaggtcctggttgagctggctcagctg 294 Query: 341 caagaccgggaggttggagatggaactacctctgttgttatc 382 || ||| |||||| || ||||| |||||||| || |||||| Sbjct: 295 caggacgaggaggtcggcgatggcactacctcggtggttatc 336
>gb|BC066538.1| Danio rerio t-complex polypeptide 1, mRNA (cDNA clone MGC:77497 IMAGE:6524710), complete cds Length = 1909 Score = 63.9 bits (32), Expect = 5e-07 Identities = 95/116 (81%) Strand = Plus / Plus Query: 185 aacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacatt 244 |||||||| ||| ||| ||||| |||||||| | ||||||||| | ||||| ||||| Sbjct: 95 aacatcgtgaagagctctctcggtcccgtcggattggacaagatgttggtggacgacatc 154 Query: 245 ggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctggaggtcga 300 || || || || ||||| |||||||| |||||||| |||| | ||||||||||||| Sbjct: 155 ggagacgtgaccatcaccaatgacggggccaccatcctgaagctgctggaggtcga 210
>gb|AF164028.1|AF164028 Danio rerio clone TA2 t-complex polypeptide 1 (Tcp1) mRNA, partial cds Length = 1661 Score = 63.9 bits (32), Expect = 5e-07 Identities = 95/116 (81%) Strand = Plus / Plus Query: 185 aacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacatt 244 |||||||| ||| ||| ||||| |||||||| | ||||||||| | ||||| ||||| Sbjct: 33 aacatcgtgaagagctctctcggtcccgtcggattggacaagatgttggtggacgacatc 92 Query: 245 ggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctggaggtcga 300 || || || || ||||| |||||||| |||||||| |||| | ||||||||||||| Sbjct: 93 ggagacgtgaccatcaccaatgacggggccaccatcctgaagctgctggaggtcga 148
>gb|AC006494.13| Drosophila melanogaster clone BACR48C17, complete sequence Length = 164501 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 221 gacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccatt 280 ||||||||||| ||||| ||||| ||||||||||| | || || || |||||||||||| Sbjct: 67067 gacaagatgctggtggacgacatcggcgatgtcacagtgaccaacgatggagccaccatt 67008 Query: 281 ctgaggatgctggaggtcgagca 303 ||| | |||||||||| ||||| Sbjct: 67007 ctgcgactgctggaggtggagca 66985
>gb|AC008196.8| Drosophila melanogaster clone BACR30J14, complete sequence Length = 179562 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 221 gacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccatt 280 ||||||||||| ||||| ||||| ||||||||||| | || || || |||||||||||| Sbjct: 119780 gacaagatgctggtggacgacatcggcgatgtcacagtgaccaacgatggagccaccatt 119721 Query: 281 ctgaggatgctggaggtcgagca 303 ||| | |||||||||| ||||| Sbjct: 119720 ctgcgactgctggaggtggagca 119698
>gb|AC152752.18| Medicago truncatula clone mth2-89c9, complete sequence Length = 117577 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 402 agagagccaatgatcttgtgaggaataagattcacccgacctctattattagtgg 456 ||||||| ||||||||||| |||||||||||||| || ||||| ||||| ||||| Sbjct: 7388 agagagcaaatgatcttgttaggaataagattcatccaacctcgattatcagtgg 7334 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 122 ggcgagcgccagtccggccaggacgtccgcac 153 ||||| ||||| |||||||| ||||||||||| Sbjct: 8050 ggcgaacgccaatccggccaagacgtccgcac 8019
>gb|AC157758.4| Medicago truncatula clone mth2-62b13, complete sequence Length = 106286 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 402 agagagccaatgatcttgtgaggaataagattcacccgacctctattattagtgg 456 ||||||| ||||||||||| |||||||||||||| || ||||| ||||| ||||| Sbjct: 67253 agagagcaaatgatcttgttaggaataagattcatccaacctcgattatcagtgg 67307 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 122 ggcgagcgccagtccggccaggacgtccgcac 153 ||||| ||||| |||||||| ||||||||||| Sbjct: 66591 ggcgaacgccaatccggccaagacgtccgcac 66622
>gb|AE003739.3| Drosophila melanogaster chromosome 3R, section 77 of 118 of the complete sequence Length = 224856 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 221 gacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccatt 280 ||||||||||| ||||| ||||| ||||||||||| | || || || |||||||||||| Sbjct: 69894 gacaagatgctggtggacgacatcggcgatgtcacagtgaccaacgatggagccaccatt 69835 Query: 281 ctgaggatgctggaggtcgagca 303 ||| | |||||||||| ||||| Sbjct: 69834 ctgcgactgctggaggtggagca 69812
>ref|NM_122097.2| Arabidopsis thaliana ATP binding / protein binding AT5G20890 mRNA, complete cds Length = 2126 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 350 gaggttggagatggaactacctctgttgtt 379 |||||||| ||||||||||||||||||||| Sbjct: 440 gaggttggtgatggaactacctctgttgtt 469
>gb|AY062651.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 1960 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 350 gaggttggagatggaactacctctgttgtt 379 |||||||| ||||||||||||||||||||| Sbjct: 440 gaggttggtgatggaactacctctgttgtt 469
>gb|AY054210.1| Arabidopsis thaliana AT5g20890/F22D1_60 mRNA, complete cds Length = 1971 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 350 gaggttggagatggaactacctctgttgtt 379 |||||||| ||||||||||||||||||||| Sbjct: 435 gaggttggtgatggaactacctctgttgtt 464
>gb|AY085104.1| Arabidopsis thaliana clone 12972 mRNA, complete sequence Length = 1955 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 350 gaggttggagatggaactacctctgttgtt 379 |||||||| ||||||||||||||||||||| Sbjct: 435 gaggttggtgatggaactacctctgttgtt 464
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 Length = 96102 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 350 gaggttggagatggaactacctctgttgtt 379 |||||||| ||||||||||||||||||||| Sbjct: 32964 gaggttggtgatggaactacctctgttgtt 32935
>gb|BT002090.1| Arabidopsis thaliana Unknown protein (At5g20890) mRNA, complete cds Length = 1660 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 350 gaggttggagatggaactacctctgttgtt 379 |||||||| ||||||||||||||||||||| Sbjct: 265 gaggttggtgatggaactacctctgttgtt 294
>ref|NM_013686.1| Mus musculus t-complex protein 1 (Tcp1), mRNA Length = 1812 Score = 50.1 bits (25), Expect = 0.007 Identities = 114/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 188 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 247 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || |||||||| || || ||||| ||| || |||||||| || |||||| || Sbjct: 248 gaggtagaacatcccgcagccaaagttct-gtgtgagttggctgacctgcaagacaaaga 306 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 307 agttggagatggaactacctc 327
>ref|XM_500945.1| Yarrowia lipolytica CLIB122, YALI0B15774g predicted mRNA Length = 1827 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 344 gaccgggaggttggagatggaactacctctgttgttatcat 384 ||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 421 gaccgagaggttggagatggaaccacctctgtcgtgatcat 461
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 344 gaccgggaggttggagatggaactacctctgttgttatcat 384 ||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 2095771 gaccgagaggttggagatggaaccacctctgtcgtgatcat 2095811
>dbj|D90344.1|MUSTCP1A Mus musculus mRNA for t-complex polypeptide 1A (Tcp-1a), complete cds Length = 1812 Score = 50.1 bits (25), Expect = 0.007 Identities = 114/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 188 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 247 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || |||||||| || || ||||| ||| || |||||||| || |||||| || Sbjct: 248 gaggtagaacatcccgcagccaaagttct-gtgtgagttggctgacctgcaagacaaaga 306 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 307 agttggagatggaactacctc 327
>gb|BC068901.1| Xenopus laevis t-complex polypeptide 1, mRNA (cDNA clone MGC:83095 IMAGE:6317335), complete cds Length = 1867 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 353 gttggagatggaactacctctgttgttatcatcgctgcagagttgct 399 ||||||||||| || || || ||||||||||| ||||||||| |||| Sbjct: 314 gttggagatggtacaacatccgttgttatcattgctgcagagctgct 360
>gb|BC044673.1| Xenopus laevis similar to t-complex polypeptide 1, mRNA (cDNA clone MGC:53348 IMAGE:5571020), complete cds Length = 1868 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 353 gttggagatggaactacctctgttgttatcatcgctgcagagttgct 399 ||||||||||| || || || ||||||||||| ||||||||| |||| Sbjct: 300 gttggagatggcacaacatcagttgttatcattgctgcagagctgct 346
>gb|AC146571.13| Medicago truncatula clone mth2-104a2, complete sequence Length = 140639 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 353 gttggagatggaactacctctgttgtt 379 ||||| ||||||||||||||||||||| Sbjct: 15729 gttggcgatggaactacctctgttgtt 15703
>gb|AC135319.28| Medicago truncatula clone mth2-6g4, complete sequence Length = 120194 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 353 gttggagatggaactacctctgttgtt 379 ||||| ||||||||||||||||||||| Sbjct: 104988 gttggcgatggaactacctctgttgtt 104962
>dbj|AP000383.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MAL21 Length = 83253 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Minus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || ||||| || || || ||||| |||||| || Sbjct: 21951 gtggatgatattggtgatgtgactattacaaatgatggtgctactattcttaggatgttg 21892 Query: 293 gaggtcgagca 303 ||||||||||| Sbjct: 21891 gaggtcgagca 21881
>dbj|D11352.1| Arabidopsis thaliana DNA for CCT alpha/TCP-1, complete cds Length = 6533 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || ||||| || || || ||||| |||||| || Sbjct: 2225 gtggatgatattggtgatgtgactattacaaatgatggtgctactattcttaggatgttg 2284 Query: 293 gaggtcgagca 303 ||||||||||| Sbjct: 2285 gaggtcgagca 2295
>gb|AF143495.1|AF143495 Xenopus laevis t-complex polypeptide 1 (TCP1) pseudogene, mRNA sequence Length = 1855 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 353 gttggagatggaactacctctgttgttatcatcgctgcagagttgct 399 ||||||||||| || || || ||||||||||| ||||||||| |||| Sbjct: 301 gttggagatggcacaacatcagttgttatcattgctgcagagctgct 347
>gb|AF143494.1|AF143494 Xenopus laevis t-complex polypeptide 1 (TCP1) mRNA, complete cds Length = 1821 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 353 gttggagatggaactacctctgttgttatcatcgctgcagagttgct 399 ||||||||||| || || || ||||||||||| ||||||||| |||| Sbjct: 290 gttggagatggtacaacatccgttgttatcattgctgcagagctgct 336
>emb|CT030165.7| M.truncatula DNA sequence from clone MTH2-150K22 on chromosome 3, complete sequence Length = 134390 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 353 gttggagatggaactacctctgttgtt 379 ||||| ||||||||||||||||||||| Sbjct: 24892 gttggcgatggaactacctctgttgtt 24918
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 78 ccgccgccgccatggcgatcaccgcc 103 ||||||||||||||| |||||||||| Sbjct: 126782 ccgccgccgccatggtgatcaccgcc 126807
>gb|AF442545.1|AF442545 Physarum polycephalum CCT chaperonin alpha subunit mRNA, complete cds Length = 1677 Score = 44.1 bits (22), Expect = 0.44 Identities = 124/158 (78%) Strand = Plus / Plus Query: 221 gacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccatt 280 |||||||||||||| ||| ||||| ||||| |||||||| || ||||| ||||| || Sbjct: 169 gacaagatgctcgtcgattctattggtgatgtgacgatcaccaacgacggtgccacaatc 228 Query: 281 ctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaattggctgagctc 340 || | | | || || || ||||| || || || || || || ||| | |||||||| || Sbjct: 229 ctcaagctcctcgaagtagagcaccctgctgccaaagtgcttgtgcagttggctgacctt 288 Query: 341 caagaccgggaggttggagatggaactacctctgttgt 378 ||||| | ||||||||| ||||| || ||||||||||| Sbjct: 289 caagatcaggaggttggggatggcacaacctctgttgt 326
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 44.1 bits (22), Expect = 0.44 Identities = 43/50 (86%) Strand = Plus / Plus Query: 194 aagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacat 243 ||||| ||||| ||||| || ||||| ||||||||||| ||||| ||||| Sbjct: 533176 aagtcgtcgctgggcccggtggggctggacaagatgctggtggacgacat 533225
>gb|BC109781.1| Bos taurus cDNA clone MGC:133746 IMAGE:8068669, complete cds Length = 1893 Score = 44.1 bits (22), Expect = 0.44 Identities = 61/74 (82%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||||||||| ||||| || || || ||||| || || ||||| |||| | | ||| Sbjct: 246 gtggatgacattggtgatgtaaccattactaatgatggtgcaaccatcctgaagctactg 305 Query: 293 gaggtcgagcatcc 306 ||||| |||||||| Sbjct: 306 gaggtagagcatcc 319
>ref|NM_063321.2| Caenorhabditis elegans Chaperonin Containing TCP-1 family member (cct-1) (cct-1) mRNA, complete cds Length = 1873 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Plus Query: 336 agctccaagaccgggaggttggagatggaactacctctgttgttat 381 |||| |||||| |||||| |||||||||||||| ||||| ||||| Sbjct: 258 agctgcaagacgaggaggtcggagatggaactacttctgtcgttat 303
>gb|AF210627.1|AF210627 Eremothecium gossypii Gcd6 (YDR211w) gene, partial cds; Cdc42 (CDC42) gene, complete cds; and Tcp1 (YDR212w) gene, partial cds Length = 2202 Score = 44.1 bits (22), Expect = 0.44 Identities = 43/50 (86%) Strand = Plus / Plus Query: 194 aagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacat 243 ||||| ||||| ||||| || ||||| ||||||||||| ||||| ||||| Sbjct: 1972 aagtcgtcgctgggcccggtggggctggacaagatgctggtggacgacat 2021
>gb|AF226714.1|AF226714 Trichomonas vaginalis chaperonin subunit alpha1 CCTalpha (Ccta1) gene, complete cds Length = 2735 Score = 44.1 bits (22), Expect = 0.44 Identities = 58/70 (82%) Strand = Plus / Plus Query: 213 tcgggctcgacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgacggag 272 |||| |||||||||||||| || ||||| ||||| || ||||| ||||| || || || | Sbjct: 221 tcggtctcgacaagatgcttgtcgatgatattggtgaagtcacaatcacaaacgatggtg 280 Query: 273 ccaccattct 282 | |||||||| Sbjct: 281 ctaccattct 290
>ref|NM_211636.1| Eremothecium gossypii AGL092Wp (AGL092W), mRNA Length = 1677 Score = 44.1 bits (22), Expect = 0.44 Identities = 43/50 (86%) Strand = Plus / Plus Query: 194 aagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacat 243 ||||| ||||| ||||| || ||||| ||||||||||| ||||| ||||| Sbjct: 121 aagtcgtcgctgggcccggtggggctggacaagatgctggtggacgacat 170
>ref|NM_001038086.1| Bos taurus similar to T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha) (MGC133746), mRNA Length = 1893 Score = 44.1 bits (22), Expect = 0.44 Identities = 61/74 (82%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||||||||| ||||| || || || ||||| || || ||||| |||| | | ||| Sbjct: 246 gtggatgacattggtgatgtaaccattactaatgatggtgcaaccatcctgaagctactg 305 Query: 293 gaggtcgagcatcc 306 ||||| |||||||| Sbjct: 306 gaggtagagcatcc 319
>emb|AL590442.1|CNS07EG9 chromosome II of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 197426 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 263 aatgacggagccaccattctga 284 |||||||||||||||||||||| Sbjct: 62494 aatgacggagccaccattctga 62473
>emb|Z66500.1|CET05C12 Caenorhabditis elegans Cosmid T05C12, complete sequence Length = 33780 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Plus Query: 336 agctccaagaccgggaggttggagatggaactacctctgttgttat 381 |||| |||||| |||||| |||||||||||||| ||||| ||||| Sbjct: 17586 agctgcaagacgaggaggtcggagatggaactacttctgtcgttat 17631
>gb|U07941.1|CEU07941 Caenorhabditis elegans chaperonin subunit 1 (cct-1) gene, complete cds Length = 3047 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Plus Query: 336 agctccaagaccgggaggttggagatggaactacctctgttgttat 381 |||| |||||| |||||| |||||||||||||| ||||| ||||| Sbjct: 761 agctgcaagacgaggaggtcggagatggaactacttctgtcgttat 806
>gb|AC125793.2| Homo sapiens chromosome 16 clone CTD-3253I12, complete sequence Length = 117647 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 487 gtatgtggaggaaaagctgtct 508 |||||||||||||||||||||| Sbjct: 84040 gtatgtggaggaaaagctgtct 84061
>ref|XM_464910.1| Oryza sativa (japonica cultivar-group), mRNA Length = 537 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 tccccacccccgccgccgcca 89 ||||||||||||||||||||| Sbjct: 311 tccccacccccgccgccgcca 331
>ref|XM_519060.1| PREDICTED: Pan troglodytes similar to t-complex 1; T-complex locus TCP-1; t-complex 1 (a murine tcp homolog) (LOC463368), mRNA Length = 1155 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 353 gttggagatggaactacctctgttgttat 381 |||||||||||||||||||| || ||||| Sbjct: 288 gttggagatggaactacctccgtggttat 316
>gb|AY618171.1| Sterkiella histriomuscorum clone UGC1O0006_P24_F genomic sequence Length = 670 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 404 agagccaatgatcttgtgaggaataagattcacccgacctc 444 ||||| ||||||||||| | ||| ||||||||||| ||||| Sbjct: 431 agagcaaatgatcttgttaagaacaagattcaccctacctc 471
>gb|AY617573.1| Sterkiella histriomuscorum clone UGC1O0003_F19_R genomic sequence Length = 479 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 404 agagccaatgatcttgtgaggaataagattcacccgacctc 444 ||||| ||||||||||| | ||| ||||||||||| ||||| Sbjct: 431 agagcaaatgatcttgttaagaacaagattcaccctacctc 471
>gb|AC145322.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0096N19, complete sequence Length = 178671 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 ccccttccccacccccgccgccgcc 88 |||||||||| |||||||||||||| Sbjct: 75857 ccccttcccctcccccgccgccgcc 75881
>gb|AY973259.1| Leishmania major chaperonin subunit alpha mRNA, complete cds Length = 1641 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 189 tcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtgga 237 |||| ||||| ||||| |||||| |||| || ||||||||||| ||||| Sbjct: 104 tcgttaagtcgtcgctgggccccatcggtctggacaagatgctggtgga 152
>gb|AC129553.10| Mus musculus chromosome 5, clone RP24-351J24, complete sequence Length = 152414 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 ccccttccccacccccgccgccgcc 88 ||||||||||||||||||| ||||| Sbjct: 66944 ccccttccccacccccgcccccgcc 66920
>ref|XM_323800.1| Neurospora crassa OR74A hypothetical protein (NCU04448.1) partial mRNA Length = 1677 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 204 tcggccccgtcgggctcgacaagatgctcgtggatgacattggcgatgt 252 |||||||| ||| |||||||||||| | || ||||||||||| ||||| Sbjct: 107 tcggccccagcggtctcgacaagatgatggtcgatgacattggtgatgt 155
>gb|BC003809.1| Mus musculus t-complex protein 1, mRNA (cDNA clone MGC:6094 IMAGE:3599670), complete cds Length = 1851 Score = 42.1 bits (21), Expect = 1.8 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 221 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 280 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || |||||||| || || ||||| ||| || ||||||| || |||||| || Sbjct: 281 gaggtagaacatcccgcagccaaagttct-gtgtgagctggctgacctgcaagacaaaga 339 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 340 agttggagatggaactacctc 360
>ref|XM_950813.1| Neurospora crassa OR74A hypothetical protein (NCU04448.1) partial mRNA Length = 1677 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 204 tcggccccgtcgggctcgacaagatgctcgtggatgacattggcgatgt 252 |||||||| ||| |||||||||||| | || ||||||||||| ||||| Sbjct: 107 tcggccccagcggtctcgacaagatgatggtcgatgacattggtgatgt 155
>ref|XM_850736.1| PREDICTED: Canis familiaris similar to T-complex protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon), transcript variant 2 (LOC606873), mRNA Length = 1925 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 260 acgaatgacggagccaccattctgaggatgctggaggtcga 300 ||||||||||| ||||||||||| || ||| |||| ||||| Sbjct: 239 acgaatgacggtgccaccattctaagcatgatggacgtcga 279
>ref|XM_843210.1| PREDICTED: Canis familiaris similar to T-complex protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon), transcript variant 1 (LOC606873), mRNA Length = 1925 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 260 acgaatgacggagccaccattctgaggatgctggaggtcga 300 ||||||||||| ||||||||||| || ||| |||| ||||| Sbjct: 239 acgaatgacggtgccaccattctaagcatgatggacgtcga 279
>gb|AC027269.5| Homo sapiens BAC clone RP11-100C21 from 7, complete sequence Length = 159698 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 353 gttggagatggaactacctctgttgttat 381 |||||||||||||||||||| || ||||| Sbjct: 6049 gttggagatggaactacctccgtggttat 6021
>emb|CR678989.2|CNS0FMUX Tetraodon nigroviridis full-length cDNA Length = 706 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 agtccggccaggacgtccgca 152 ||||||||||||||||||||| Sbjct: 263 agtccggccaggacgtccgca 283
>gb|DQ149577.1| Paracoccus pantotrophus transposon TnPpa1, complete sequence Length = 44286 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 ccgccgccgccatggcgatca 98 ||||||||||||||||||||| Sbjct: 21064 ccgccgccgccatggcgatca 21044
>gb|AF322043.1| Trypanosoma brucei chaperonin subunit alpha gene, partial cds Length = 1465 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 371 tctgttgttatcatcgctgcagagttgctcaag 403 |||||||||||| |||| || |||||||||||| Sbjct: 142 tctgttgttatcctcgccgccgagttgctcaag 174
>dbj|AK151068.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830022H06 product:t-complex protein 1, full insert sequence Length = 1853 Score = 42.1 bits (21), Expect = 1.8 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 238 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 297 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || |||||||| || || ||||| ||| || ||||||| || |||||| || Sbjct: 298 gaggtagaacatcccgcagccaaagttct-gtgtgagctggctgacctgcaagacaaaga 356 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 357 agttggagatggaactacctc 377
>dbj|AK153037.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830119L09 product:t-complex protein 1, full insert sequence Length = 1853 Score = 42.1 bits (21), Expect = 1.8 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 239 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 298 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || |||||||| || || ||||| ||| || ||||||| || |||||| || Sbjct: 299 gaggtagaacatcccgcagccaaagttct-gtgtgagctggctgacctgcaagacaaaga 357 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 358 agttggagatggaactacctc 378
>dbj|AK150744.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830014M07 product:t-complex protein 1, full insert sequence Length = 3419 Score = 42.1 bits (21), Expect = 1.8 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 253 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 312 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || |||||||| || || ||||| ||| || ||||||| || |||||| || Sbjct: 313 gaggtagaacatcccgcagccaaagttct-gtgtgagctggctgacctgcaagacaaaga 371 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 372 agttggagatggaactacctc 392
>dbj|AK151903.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830042H02 product:t-complex protein 1, full insert sequence Length = 3419 Score = 42.1 bits (21), Expect = 1.8 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 253 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 312 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || |||||||| || || ||||| ||| || ||||||| || |||||| || Sbjct: 313 gaggtagaacatcccgcagccaaagttct-gtgtgagctggctgacctgcaagacaaaga 371 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 372 agttggagatggaactacctc 392
>dbj|AK149755.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530015C19 product:t-complex protein 1, full insert sequence Length = 1854 Score = 42.1 bits (21), Expect = 1.8 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 239 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 298 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || |||||||| || || ||||| ||| || ||||||| || |||||| || Sbjct: 299 gaggtagaacatcccgcagccaaagttct-gtgtgagctggctgacctgcaagacaaaga 357 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 358 agttggagatggaactacctc 378
>dbj|AK149611.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530001M14 product:t-complex protein 1, full insert sequence Length = 2364 Score = 42.1 bits (21), Expect = 1.8 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 238 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 297 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || |||||||| || || ||||| ||| || ||||||| || |||||| || Sbjct: 298 gaggtagaacatcccgcagccaaagttct-gtgtgagctggctgacctgcaagacaaaga 356 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 357 agttggagatggaactacctc 377
>dbj|AK152759.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830083P13 product:t-complex protein 1, full insert sequence Length = 1853 Score = 42.1 bits (21), Expect = 1.8 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 239 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 298 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || |||||||| || || ||||| ||| || ||||||| || |||||| || Sbjct: 299 gaggtagaacatcccgcagccaaagttct-gtgtgagctggctgacctgcaagacaaaga 357 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 358 agttggagatggaactacctc 378
>dbj|AK150666.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830013G22 product:t-complex protein 1, full insert sequence Length = 3419 Score = 42.1 bits (21), Expect = 1.8 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 253 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 312 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || |||||||| || || ||||| ||| || ||||||| || |||||| || Sbjct: 313 gaggtagaacatcccgcagccaaagttct-gtgtgagctggctgacctgcaagacaaaga 371 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 372 agttggagatggaactacctc 392
>dbj|AK152641.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830081K16 product:t-complex protein 1, full insert sequence Length = 1844 Score = 42.1 bits (21), Expect = 1.8 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 230 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 289 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || |||||||| || || ||||| ||| || ||||||| || |||||| || Sbjct: 290 gaggtagaacatcccgcagccaaagttct-gtgtgagctggctgacctgcaagacaaaga 348 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 349 agttggagatggaactacctc 369
>dbj|AK152633.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830081I21 product:t-complex protein 1, full insert sequence Length = 3419 Score = 42.1 bits (21), Expect = 1.8 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 253 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 312 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || |||||||| || || ||||| ||| || ||||||| || |||||| || Sbjct: 313 gaggtagaacatcccgcagccaaagttct-gtgtgagctggctgacctgcaagacaaaga 371 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 372 agttggagatggaactacctc 392
>dbj|AK165665.1| Mus musculus RCB-0035 WEHI-3 cDNA, RIKEN full-length enriched library, clone:G430121O08 product:t-complex protein 1, full insert sequence Length = 2267 Score = 42.1 bits (21), Expect = 1.8 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 240 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 299 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || |||||||| || || ||||| ||| || ||||||| || |||||| || Sbjct: 300 gaggtagaacatcccgcagccaaagttct-gtgtgagctggctgacctgcaagacaaaga 358 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 359 agttggagatggaactacctc 379
>dbj|AK167529.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530018N11 product:t-complex protein 1, full insert sequence Length = 2262 Score = 42.1 bits (21), Expect = 1.8 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 238 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 297 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || |||||||| || || ||||| ||| || ||||||| || |||||| || Sbjct: 298 gaggtagaacatcccgcagccaaagttct-gtgtgagctggctgacctgcaagacaaaga 356 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 357 agttggagatggaactacctc 377
>dbj|AK166966.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0025N07 product:t-complex protein 1, full insert sequence Length = 1874 Score = 42.1 bits (21), Expect = 1.8 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 261 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 320 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || |||||||| || || ||||| ||| || ||||||| || |||||| || Sbjct: 321 gaggtagaacatcccgcagccaaagttct-gtgtgagctggctgacctgcaagacaaaga 379 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 380 agttggagatggaactacctc 400
>dbj|AK166828.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0015J24 product:t-complex protein 1, full insert sequence Length = 1850 Score = 42.1 bits (21), Expect = 1.8 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 237 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 296 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || |||||||| || || ||||| ||| || ||||||| || |||||| || Sbjct: 297 gaggtagaacatcccgcagccaaagttct-gtgtgagctggctgacctgcaagacaaaga 355 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 356 agttggagatggaactacctc 376
>dbj|AK082404.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230047K01 product:unclassifiable, full insert sequence Length = 1340 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 ccccttccccacccccgccgccgcc 88 ||||||||||||||||||| ||||| Sbjct: 1276 ccccttccccacccccgcccccgcc 1300
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 ccccttccccacccccgccgccgcc 88 |||||||||| |||||||||||||| Sbjct: 4755817 ccccttcccctcccccgccgccgcc 4755793 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tccccacccccgccgccgcc 88 |||||||||||||||||||| Sbjct: 2771889 tccccacccccgccgccgcc 2771870
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 tccccacccccgccgccgcca 89 ||||||||||||||||||||| Sbjct: 9949133 tccccacccccgccgccgcca 9949153 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tccccacccccgccgccgcc 88 |||||||||||||||||||| Sbjct: 9485727 tccccacccccgccgccgcc 9485708
>dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0521F09 Length = 164823 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 tccccacccccgccgccgcca 89 ||||||||||||||||||||| Sbjct: 130095 tccccacccccgccgccgcca 130115
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ccgacatcatgggcgagcgcc 131 ||||||||||||||||||||| Sbjct: 3423972 ccgacatcatgggcgagcgcc 3423992
>dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0413A11 Length = 188440 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 tccccacccccgccgccgcca 89 ||||||||||||||||||||| Sbjct: 23826 tccccacccccgccgccgcca 23846
>ref|NM_012670.1| Rattus norvegicus t-complex protein 1 (Tcp1), mRNA Length = 1831 Score = 42.1 bits (21), Expect = 1.8 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || ||||| || ||||||||||||| | || Sbjct: 213 gtggatgatattggtgatgtaactattactaatgatggggccaccattctgaaattattg 272 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || ||||| || || || ||||| ||| ||| ||||||| || |||||| || Sbjct: 273 gaggtggaacatcctgcagccaaagttct-gtgtgaactggctgacctgcaagacaaaga 331 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 332 agttggagatggaactacctc 352
>dbj|D90345.1|RATTCP1 Rattus norvegicus Tcp-1 mRNA for t complex polypeptide 1, complete cds Length = 1831 Score = 42.1 bits (21), Expect = 1.8 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || ||||| || ||||||||||||| | || Sbjct: 213 gtggatgatattggtgatgtaactattactaatgatggggccaccattctgaaattattg 272 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || ||||| || || || ||||| ||| ||| ||||||| || |||||| || Sbjct: 273 gaggtggaacatcctgcagccaaagttct-gtgtgaactggctgacctgcaagacaaaga 331 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 332 agttggagatggaactacctc 352
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 ccccttccccacccccgccgccgcc 88 |||||||||| |||||||||||||| Sbjct: 4774601 ccccttcccctcccccgccgccgcc 4774577 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tccccacccccgccgccgcc 88 |||||||||||||||||||| Sbjct: 2780920 tccccacccccgccgccgcc 2780901
>gb|M12899.1|MUSTCPAB Mouse t complex polypeptide 1 (Tcp-1-b) mRNA, complete cds Length = 1809 Score = 42.1 bits (21), Expect = 1.8 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 233 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 292 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 196 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 255 Query: 293 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 351 ||||| || |||||||| || || ||||| ||| || ||||||| || |||||| || Sbjct: 256 gaggtagaacatcccgcagccaaagttct-gtgtgagctggctgacctgcaagacaaaga 314 Query: 352 ggttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 315 agttggagatggaactacctc 335
>gb|AC091775.10| Oryza sativa chromosome 3 BAC OSJNBa0004G17 genomic sequence, complete sequence Length = 139074 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ccttccccacccccgccgccgcca 89 |||||||| ||||||||||||||| Sbjct: 18868 ccttcccctcccccgccgccgcca 18845
>ref|XM_530340.1| PREDICTED: Pan troglodytes LOC458538 (LOC458538), mRNA Length = 3303 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 ccccttccccacccccgccgccgc 87 ||||||||||| |||||||||||| Sbjct: 1513 ccccttccccatccccgccgccgc 1536
>ref|XM_482523.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2586 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccccacccccgccgccgcca 89 |||||||||||||||||||| Sbjct: 348 ccccacccccgccgccgcca 329
>ref|XM_469466.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1957 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccttccccacccccgccgccgcca 89 |||||||| ||||||||||||||| Sbjct: 663 ccttcccctcccccgccgccgcca 686
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 gcaagtatgtggaggaaaag 502 |||||||||||||||||||| Sbjct: 181474 gcaagtatgtggaggaaaag 181493
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence Length = 159632 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tccccacccccgccgccgcc 88 |||||||||||||||||||| Sbjct: 51696 tccccacccccgccgccgcc 51677
>ref|XM_360646.1| Magnaporthe grisea 70-15 hypothetical protein (MG03189.4) partial mRNA Length = 5070 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 caagtcctcgctcggccccg 212 |||||||||||||||||||| Sbjct: 2451 caagtcctcgctcggccccg 2470
>gb|AC135567.3| Mus musculus BAC clone RP23-312I24 from chromosome 16, complete sequence Length = 208603 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccccacccccgccgccgcca 89 |||||||||||||||||||| Sbjct: 191485 ccccacccccgccgccgcca 191466
>gb|AC115787.6| Mus musculus chromosome 16, clone RP23-212P1, complete sequence Length = 209108 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ccccacccccgccgccgcca 89 |||||||||||||||||||| Sbjct: 176912 ccccacccccgccgccgcca 176931
>gb|AC108502.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1378_A04, complete sequence Length = 103458 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tccccacccccgccgccgcc 88 |||||||||||||||||||| Sbjct: 34133 tccccacccccgccgccgcc 34114
>gb|AC087860.2| Bos taurus clone RP42-135P2, complete sequence Length = 203696 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ccactgccccttccccaccc 77 |||||||||||||||||||| Sbjct: 128900 ccactgccccttccccaccc 128919
>gb|BC067104.1| Homo sapiens cDNA clone IMAGE:6649857, with apparent retained intron Length = 2245 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 ccccttccccacccccgccgccgc 87 ||||||||||| |||||||||||| Sbjct: 526 ccccttccccatccccgccgccgc 549
>gb|DP000008.1| Bos taurus target 1 genomic scaffold Length = 2072671 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ccactgccccttccccaccc 77 |||||||||||||||||||| Sbjct: 719404 ccactgccccttccccaccc 719423
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccttccccacccccgccgccgcca 89 |||||||| ||||||||||||||| Sbjct: 28134237 ccttcccctcccccgccgccgcca 28134260
>ref|XM_846097.1| PREDICTED: Canis familiaris similar to soluble adenylyl cyclase (LOC608939), mRNA Length = 662 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ccccgccgccgccatggcga 95 |||||||||||||||||||| Sbjct: 81 ccccgccgccgccatggcga 100
>emb|Z35599.1|CEF25F2 Caenorhabditis elegans Cosmid F25F2, complete sequence Length = 29551 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 245 ggcgatgtcacgatcacgaatgacggagccac 276 ||||||||||| ||||| || ||||||||||| Sbjct: 5827 ggcgatgtcaccatcaccaacgacggagccac 5796
>gb|AC127172.13| Mus musculus strain C57BL/6J clone rp23-387d2 map 17, complete sequence Length = 203077 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 85100 gttggagatggaactacctc 85119
>emb|AL772337.17| Human DNA sequence from clone XXyac-21GA2 on chromosome 9 Contains a pseudogene similar to part of E74-like factor 2 (ets domain transcription factor) (EU32, NERF, NERF-2, NERF-1A,NERF-1B) (ELF2), a cathepsin L (MEP, CATL) (CTSL) pseudogene, a pseudogene similar to part of a fructose-1,6-bisphosphatase protein, two novel genes, a novel gene (FLJ35866) and a CpG island, complete sequence Length = 95932 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 tcccactgccccttccccaccccc 79 ||||||||||||| |||||||||| Sbjct: 74702 tcccactgcccctcccccaccccc 74725
>emb|AL158827.27| Human DNA sequence from clone RP11-330M2 on chromosome 9 Contains a pseudogene similar to part of a zinc finger protein, two novel pseudogenes, a novel gene similar to DKFZP434I1117, a novel pseudogene (FLJ23476), two novel gene, a novel gene similar to MGC12954 and four CpG islands, complete sequence Length = 186108 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 ttccccacccccgccgccgc 87 |||||||||||||||||||| Sbjct: 53817 ttccccacccccgccgccgc 53836
>ref|XM_964078.1| PREDICTED: Tribolium castaneum similar to T-complex protein 1 subunit alpha (TCP-1-alpha) (CCT-alpha) (LOC657631), mRNA Length = 1759 Score = 40.1 bits (20), Expect = 6.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 182 gccaacatcgtcaagtcctcgctcggccccgtcgggctcgacaa 225 ||||| |||||||| ||| |||||||||||||| |||||||| Sbjct: 94 gccaatatcgtcaaaagctccctcggccccgtcggactcgacaa 137
>emb|Z68195.1|SC8142B S.cerevisiae chromosome IV cosmid 8142B Length = 20089 Score = 40.1 bits (20), Expect = 6.9 Identities = 56/68 (82%) Strand = Plus / Plus Query: 179 gtggccaacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggat 238 ||||| ||| |||||||||| || | |||||||| || || ||||| ||||| || ||| Sbjct: 9474 gtggctaacgtcgtcaagtcatctttaggccccgttggactggacaaaatgcttgttgat 9533 Query: 239 gacattgg 246 |||||||| Sbjct: 9534 gacattgg 9541
>emb|Z68194.1|SC8142A S.cerevisiae chromosome IV cosmid 8142A Length = 39827 Score = 40.1 bits (20), Expect = 6.9 Identities = 56/68 (82%) Strand = Plus / Plus Query: 179 gtggccaacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggat 238 ||||| ||| |||||||||| || | |||||||| || || ||||| ||||| || ||| Sbjct: 29212 gtggctaacgtcgtcaagtcatctttaggccccgttggactggacaaaatgcttgttgat 29271 Query: 239 gacattgg 246 |||||||| Sbjct: 29272 gacattgg 29279
>emb|Y19177.1|SAN19177 Streptomyces antibioticus polyketide biosynthetic gene cluster Length = 7482 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 tcaccgcccaggtccccgac 115 |||||||||||||||||||| Sbjct: 4829 tcaccgcccaggtccccgac 4848
>gb|AY286002.1| Oryza sativa (indica cultivar-group) teosinte-branching 1 (TB1) gene, complete cds Length = 3598 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccttccccacccccgccgccgcca 89 |||||||| ||||||||||||||| Sbjct: 1410 ccttcccctcccccgccgccgcca 1433
>gb|DQ397567.1| Cenarchaeum symbiosum clone C07B06, complete sequence Length = 41363 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ctcgacaagatgctcgtgga 237 |||||||||||||||||||| Sbjct: 36644 ctcgacaagatgctcgtgga 36663
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 cttccccacccccgccgccgccat 90 ||||||||||| |||||||||||| Sbjct: 2375057 cttccccaccctcgccgccgccat 2375034
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 cttccccacccccgccgccgccat 90 ||||||||||| |||||||||||| Sbjct: 2625435 cttccccaccctcgccgccgccat 2625412
>emb|BX248581.17| Zebrafish DNA sequence from clone CH211-208O6 in linkage group 24, complete sequence Length = 202872 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 atgcaagtatgtggaggaaa 500 |||||||||||||||||||| Sbjct: 149895 atgcaagtatgtggaggaaa 149914
>emb|CR619806.1| full-length cDNA clone CS0DE002YF20 of Placenta of Homo sapiens (human) Length = 1382 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 ttccccacccccgccgccgc 87 |||||||||||||||||||| Sbjct: 309 ttccccacccccgccgccgc 290
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cacccccgccgccgccatgg 92 |||||||||||||||||||| Sbjct: 4874550 cacccccgccgccgccatgg 4874569
>dbj|AK151445.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830030D15 product:t-complex protein 1, full insert sequence Length = 1792 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 297 gttggagatggaactacctc 316
>dbj|AK153430.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830160D23 product:t-complex protein 1, full insert sequence Length = 1792 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 297 gttggagatggaactacctc 316
>gb|AC092804.2| Homo sapiens chromosome 1 clone RP11-81E23, complete sequence Length = 161398 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 tctgttgttatcatcgctgc 390 |||||||||||||||||||| Sbjct: 44702 tctgttgttatcatcgctgc 44683
>gb|AC024592.5| Homo sapiens chromosome 19 clone P1-29569, complete sequence Length = 80893 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 tcccactgccccttccccaccccc 79 |||| ||||||||||||||||||| Sbjct: 60129 tccccctgccccttccccaccccc 60152
>gb|AC146740.3| Callithrix jacchus clone CH259-204H2, complete sequence Length = 224361 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 gcaagtatgtggaggaaaag 502 |||||||||||||||||||| Sbjct: 181474 gcaagtatgtggaggaaaag 181493
>gb|AY043215.1| Oryza sativa teosinte branched1 protein (tb1) mRNA, complete cds Length = 1675 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccttccccacccccgccgccgcca 89 |||||||| ||||||||||||||| Sbjct: 364 ccttcccctcccccgccgccgcca 387
>gb|S46763.1| Tcp-1=t-complex polypeptide 1 [mice, Genomic, 10043 nt] Length = 10043 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 2751 gttggagatggaactacctc 2770
>gb|BC052313.1| Homo sapiens cDNA clone IMAGE:6650043, partial cds Length = 2245 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 ccccttccccacccccgccgccgc 87 ||||||||||| |||||||||||| Sbjct: 526 ccccttccccatccccgccgccgc 549
>gb|AC008817.8| Homo sapiens chromosome 5 clone CTD-2122P11, complete sequence Length = 186185 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 gttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 27515 gttggagatggaactacctc 27496
>ref|NM_171104.2| Caenorhabditis elegans Chaperonin Containing TCP-1 family member (cct-5) (cct-5) mRNA, complete cds Length = 1659 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 245 ggcgatgtcacgatcacgaatgacggagccac 276 ||||||||||| ||||| || ||||||||||| Sbjct: 229 ggcgatgtcaccatcaccaacgacggagccac 260
>ref|NM_065514.4| Caenorhabditis elegans Chaperonin Containing TCP-1 family member (cct-5) (cct-5) mRNA, complete cds Length = 1930 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 245 ggcgatgtcacgatcacgaatgacggagccac 276 ||||||||||| ||||| || ||||||||||| Sbjct: 231 ggcgatgtcaccatcaccaacgacggagccac 262
>ref|NG_003036.1| Homo sapiens t-complex 1-like 2 (TCP1L2) pseudogene on chromosome 5 Length = 2210 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 366 gttggagatggaactacctc 385
>emb|AJ550758.1|LGR550758 Lopezia grandiflora partial mRNA for cytosolic phosphoglucose isomerase (pgiC gene) Length = 889 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 gatcttgtgaggaataagat 432 |||||||||||||||||||| Sbjct: 378 gatcttgtgaggaataagat 359
>gb|AF322143.1|AF322143 Oryza sativa teosinte branched1 protein (tb1) gene, partial cds Length = 1068 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccttccccacccccgccgccgcca 89 |||||||| ||||||||||||||| Sbjct: 161 ccttcccctcccccgccgccgcca 184
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tccccacccccgccgccgcc 88 |||||||||||||||||||| Sbjct: 23198727 tccccacccccgccgccgcc 23198708
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccccacccccgccgccgcca 89 |||||||||||||||||||| Sbjct: 20841130 ccccacccccgccgccgcca 20841111
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tccccacccccgccgccgcc 88 |||||||||||||||||||| Sbjct: 21018755 tccccacccccgccgccgcc 21018736
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccttccccacccccgccgccgcca 89 |||||||| ||||||||||||||| Sbjct: 28225561 ccttcccctcccccgccgccgcca 28225584
>gb|AC068291.6| Homo sapiens BAC clone RP11-670I21 from 2, complete sequence Length = 113955 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccccacccccgccgccgcca 89 |||||||||||||||||||| Sbjct: 42983 ccccacccccgccgccgcca 42964
>gb|AC108868.4| Homo sapiens BAC clone RP11-448J14 from 2, complete sequence Length = 109290 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 gtcccactgccccttcccca 74 |||||||||||||||||||| Sbjct: 36076 gtcccactgccccttcccca 36057
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 gccgccatggcgatcaccgc 102 |||||||||||||||||||| Sbjct: 5073262 gccgccatggcgatcaccgc 5073281 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 187 catcgtcaagtcctcgctcggccccgtc 214 |||||||| ||||||||||||| ||||| Sbjct: 3972928 catcgtcatgtcctcgctcggcaccgtc 3972901
>dbj|AP003868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_B08 Length = 131184 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccccacccccgccgccgcca 89 |||||||||||||||||||| Sbjct: 19431 ccccacccccgccgccgcca 19412
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tccccacccccgccgccgcc 88 |||||||||||||||||||| Sbjct: 99288 tccccacccccgccgccgcc 99269
>dbj|BS000117.1| Pan troglodytes chromosome 22 clone:RP43-027E03, map 22, complete sequences Length = 155641 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 ccccttccccacccccgccgccgc 87 ||||||||||| |||||||||||| Sbjct: 4067 ccccttccccatccccgccgccgc 4090
>emb|AL929225.6| Zebrafish DNA sequence from clone CH211-250A24, complete sequence Length = 151067 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 atgcaagtatgtggaggaaa 500 |||||||||||||||||||| Sbjct: 149462 atgcaagtatgtggaggaaa 149443
>dbj|AP003881.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1124_B05 Length = 109917 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccccacccccgccgccgcca 89 |||||||||||||||||||| Sbjct: 72263 ccccacccccgccgccgcca 72244
>dbj|AK120059.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E13, full insert sequence Length = 2345 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tccccacccccgccgccgcc 88 |||||||||||||||||||| Sbjct: 72 tccccacccccgccgccgcc 53
>dbj|AK107083.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G01, full insert sequence Length = 1935 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccttccccacccccgccgccgcca 89 |||||||| ||||||||||||||| Sbjct: 663 ccttcccctcccccgccgccgcca 686
>gb|AF188130.1|AF188130 Oxytricha nova clone 11 chaperonin beta subunit gene, complete cds Length = 1893 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 350 gaggttggagatggaactacctctgttg 377 ||||||||||||||||| ||| |||||| Sbjct: 431 gaggttggagatggaaccaccactgttg 458
>gb|AY704413.1| Paracoccus pantotrophus hypothetical transcriptional regulator OrfR gene, partial cds; and sulfolactate sulfo-lyase small subunit (suyA), sulfolactate sulfo-lyase large subunit (suyB), and putative sulfate exporter (suyZ) genes, complete cds Length = 3574 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 165 cggcgtgccaggcggtggccaacatcgtcaag 196 |||| ||| ||||||||||||||| ||||||| Sbjct: 1233 cggcctgcgaggcggtggccaacaacgtcaag 1264
>dbj|AK100882.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127J11, full insert sequence Length = 4775 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tccccacccccgccgccgcc 88 |||||||||||||||||||| Sbjct: 193 tccccacccccgccgccgcc 174
>dbj|AK072110.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119E16, full insert sequence Length = 2587 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccccacccccgccgccgcca 89 |||||||||||||||||||| Sbjct: 349 ccccacccccgccgccgcca 330
>dbj|AP001726.1| Homo sapiens genomic DNA, chromosome 21q, section 70/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 ccccttccccacccccgccgccgc 87 ||||||||||| |||||||||||| Sbjct: 257387 ccccttccccatccccgccgccgc 257410
>gb|DQ332222.1| Synthetic construct Saccharomyces cerevisiae clone FLH201191.01X TCP1 gene, complete sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.9 Identities = 56/68 (82%) Strand = Plus / Plus Query: 179 gtggccaacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggat 238 ||||| ||| |||||||||| || | |||||||| || || ||||| ||||| || ||| Sbjct: 106 gtggctaacgtcgtcaagtcatctttaggccccgttggactggacaaaatgcttgttgat 165 Query: 239 gacattgg 246 |||||||| Sbjct: 166 gacattgg 173
>dbj|AB088343.1| Oryza sativa (japonica cultivar-group) OsTB1 gene for teosinte branched1 protein, complete cds Length = 3626 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccttccccacccccgccgccgcca 89 |||||||| ||||||||||||||| Sbjct: 1419 ccttcccctcccccgccgccgcca 1442
>dbj|D85922.1|HUMQ16F8 Homo sapiens DNA for single-minded gene 2, exon 1-6, partial cds Length = 42338 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 ccccttccccacccccgccgccgc 87 ||||||||||| |||||||||||| Sbjct: 11447 ccccttccccatccccgccgccgc 11470
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tccccacccccgccgccgcc 88 |||||||||||||||||||| Sbjct: 23126918 tccccacccccgccgccgcc 23126899
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 cccacccccgccgccgccatggcg 94 |||| ||||||||||||||||||| Sbjct: 1653902 cccaaccccgccgccgccatggcg 1653925
>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168063 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tccccacccccgccgccgcc 88 |||||||||||||||||||| Sbjct: 11845 tccccacccccgccgccgcc 11826
>gb|U25698.1|CEU25698 Caenorhabditis elegans CCT chaperonin subunit 5 (cct-5) mRNA, complete cds Length = 1629 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 245 ggcgatgtcacgatcacgaatgacggagccac 276 ||||||||||| ||||| || ||||||||||| Sbjct: 199 ggcgatgtcaccatcaccaacgacggagccac 230
>emb|AL683893.26| Mouse DNA sequence from clone RP23-122N18 on chromosome 4, complete sequence Length = 204841 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 catgcaagtatgtggaggaa 499 |||||||||||||||||||| Sbjct: 183911 catgcaagtatgtggaggaa 183930
>emb|AL772131.5| Mouse DNA sequence from clone RP23-472I13 on chromosome 4, complete sequence Length = 179035 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccccacccccgccgccgcca 89 |||||||||||||||||||| Sbjct: 172028 ccccacccccgccgccgcca 172009
>emb|AL589878.12| Mouse DNA sequence from clone RP23-351C7 on chromosome 15, complete sequence Length = 203949 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 gttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 118498 gttggagatggaactacctc 118479
>gb|M34665.1|CRUTCP1A Chinese hamster T-complex protein 1 (TCP-1) mRNA, complete cds Length = 1845 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 ggagatggaactacctctgt 375 |||||||||||||||||||| Sbjct: 347 ggagatggaactacctctgt 366
>gb|M21160.1|YSCTCP1 Yeast (S.cerevisiae) T complex protein 1 (Tcp-1) gene, complete cds Length = 2398 Score = 40.1 bits (20), Expect = 6.9 Identities = 56/68 (82%) Strand = Plus / Plus Query: 179 gtggccaacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggat 238 ||||| ||| |||||||||| || | |||||||| || || ||||| ||||| || ||| Sbjct: 469 gtggctaacgtcgtcaagtcatctttaggccccgttggactggacaaaatgcttgttgat 528 Query: 239 gacattgg 246 |||||||| Sbjct: 529 gacattgg 536
>gb|AC116729.14| Mus musculus chromosome 3, clone RP23-346I1, complete sequence Length = 224088 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccccacccccgccgccgcca 89 |||||||||||||||||||| Sbjct: 116418 ccccacccccgccgccgcca 116399
>gb|L07317.1|PIGGPROAI Pig G protein alpha i subunit gene, exon 1 including 5' end of cds Length = 1126 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 tccccacccccgccgccgccatgg 92 ||||||| |||||||||||||||| Sbjct: 818 tccccactcccgccgccgccatgg 841
>dbj|D10606.1|MUSTCP Mus musculus gene for t-complex polypeptide 1, complete cds Length = 9261 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gttggagatggaactacctc 372 |||||||||||||||||||| Sbjct: 1969 gttggagatggaactacctc 1988
>dbj|AP000697.1| Homo sapiens genomic DNA, chromosome 21q22.2, BAC clone:KB594G10, CBR1-HLCS region Length = 136219 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 ccccttccccacccccgccgccgc 87 ||||||||||| |||||||||||| Sbjct: 73080 ccccttccccatccccgccgccgc 73103 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,899,860 Number of Sequences: 3902068 Number of extensions: 3899860 Number of successful extensions: 89941 Number of sequences better than 10.0: 178 Number of HSP's better than 10.0 without gapping: 179 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88427 Number of HSP's gapped (non-prelim): 1511 length of query: 514 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 491 effective length of database: 17,143,297,704 effective search space: 8417359172664 effective search space used: 8417359172664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
