Clone Name | bart55c03 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_507360.1| PREDICTED Oryza sativa (japonica cultivar-group), P0492E07.108 mRNA Length = 1297 Score = 272 bits (137), Expect = 1e-69 Identities = 359/432 (83%), Gaps = 7/432 (1%) Strand = Plus / Plus Query: 101 cgtgctctaggttttggggatggaggccgagacggcggcgaagagggcgcgggagagcga 160 ||||||||||||| | || |||||||||||| ||||||||||||||||||||||||||| Sbjct: 119 cgtgctctaggttctcgg-atggaggccgaggcggcggcgaagagggcgcgggagagcgg 177 Query: 161 tggcgctgcggcggcggcggacggagccgttgagcaggcggggatctccgccgtcatccc 220 || ||| |||||||| ||| |||| ||||||||||| ||||| ||||||||||| Sbjct: 178 tgacgcggcggcggc------cggtgccggcgagcaggcgggtatctctgccgtcatccc 231 Query: 221 cgggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtgga 280 || |||||||||||||| |||||||||||||| || ||||||||||| ||||||| || Sbjct: 232 tggatggttctccgagattagccccatgtggcctggtgaggcacactcattgaaggtcga 291 Query: 281 gaaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtcctccac 340 ||||| || |||||||| ||||| ||||||||| ||||| |||| || ||||||||||| Sbjct: 292 aaaggtactattccaaggaaagtcggactaccaaaatgtgatggtgtttcagtcctccac 351 Query: 341 ctgcgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgcgc 400 | ||| |||||||| || |||||||| ||||| ||||| || ||| |||| ||||| || Sbjct: 352 gtacggcaaggtgcttgtgctggatggagtgattcaggtcactgagagggatgagtgtgc 411 Query: 401 ctaccaggagatgattacccaccttcctctctgctcaatcaaggatccaaagaaggtcct 460 ||||| ||||||||||||||||| || || ||||| ||||| ||||| |||||||| | Sbjct: 412 ttaccaagagatgattacccacctccccctttgctctatcaaagatcccaagaaggtgtt 471 Query: 461 ggtcataggtggcggagacggcggcgttctgcgggaggtctcacggcactcctcggtgga 520 || || || || ||||| || || ||| |||| || || ||||| || ||||||||||| Sbjct: 472 agttattggaggtggagatggtggtgttttgcgtgaagtttcacgacattcctcggtgga 531 Query: 521 gcagatcgacat 532 ||| || ||||| Sbjct: 532 gcaaattgacat 543
>ref|XM_506281.2| PREDICTED Oryza sativa (japonica cultivar-group), P0492E07.108 mRNA Length = 1346 Score = 272 bits (137), Expect = 1e-69 Identities = 359/432 (83%), Gaps = 7/432 (1%) Strand = Plus / Plus Query: 101 cgtgctctaggttttggggatggaggccgagacggcggcgaagagggcgcgggagagcga 160 ||||||||||||| | || |||||||||||| ||||||||||||||||||||||||||| Sbjct: 120 cgtgctctaggttctcgg-atggaggccgaggcggcggcgaagagggcgcgggagagcgg 178 Query: 161 tggcgctgcggcggcggcggacggagccgttgagcaggcggggatctccgccgtcatccc 220 || ||| |||||||| ||| |||| ||||||||||| ||||| ||||||||||| Sbjct: 179 tgacgcggcggcggc------cggtgccggcgagcaggcgggtatctctgccgtcatccc 232 Query: 221 cgggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtgga 280 || |||||||||||||| |||||||||||||| || ||||||||||| ||||||| || Sbjct: 233 tggatggttctccgagattagccccatgtggcctggtgaggcacactcattgaaggtcga 292 Query: 281 gaaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtcctccac 340 ||||| || |||||||| ||||| ||||||||| ||||| |||| || ||||||||||| Sbjct: 293 aaaggtactattccaaggaaagtcggactaccaaaatgtgatggtgtttcagtcctccac 352 Query: 341 ctgcgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgcgc 400 | ||| |||||||| || |||||||| ||||| ||||| || ||| |||| ||||| || Sbjct: 353 gtacggcaaggtgcttgtgctggatggagtgattcaggtcactgagagggatgagtgtgc 412 Query: 401 ctaccaggagatgattacccaccttcctctctgctcaatcaaggatccaaagaaggtcct 460 ||||| ||||||||||||||||| || || ||||| ||||| ||||| |||||||| | Sbjct: 413 ttaccaagagatgattacccacctccccctttgctctatcaaagatcccaagaaggtgtt 472 Query: 461 ggtcataggtggcggagacggcggcgttctgcgggaggtctcacggcactcctcggtgga 520 || || || || ||||| || || ||| |||| || || ||||| || ||||||||||| Sbjct: 473 agttattggaggtggagatggtggtgttttgcgtgaagtttcacgacattcctcggtgga 532 Query: 521 gcagatcgacat 532 ||| || ||||| Sbjct: 533 gcaaattgacat 544
>dbj|AK099606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048E04, full insert sequence Length = 1346 Score = 272 bits (137), Expect = 1e-69 Identities = 359/432 (83%), Gaps = 7/432 (1%) Strand = Plus / Plus Query: 101 cgtgctctaggttttggggatggaggccgagacggcggcgaagagggcgcgggagagcga 160 ||||||||||||| | || |||||||||||| ||||||||||||||||||||||||||| Sbjct: 120 cgtgctctaggttctcgg-atggaggccgaggcggcggcgaagagggcgcgggagagcgg 178 Query: 161 tggcgctgcggcggcggcggacggagccgttgagcaggcggggatctccgccgtcatccc 220 || ||| |||||||| ||| |||| ||||||||||| ||||| ||||||||||| Sbjct: 179 tgacgcggcggcggc------cggtgccggcgagcaggcgggtatctctgccgtcatccc 232 Query: 221 cgggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtgga 280 || |||||||||||||| |||||||||||||| || ||||||||||| ||||||| || Sbjct: 233 tggatggttctccgagattagccccatgtggcctggtgaggcacactcattgaaggtcga 292 Query: 281 gaaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtcctccac 340 ||||| || |||||||| ||||| ||||||||| ||||| |||| || ||||||||||| Sbjct: 293 aaaggtactattccaaggaaagtcggactaccaaaatgtgatggtgtttcagtcctccac 352 Query: 341 ctgcgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgcgc 400 | ||| |||||||| || |||||||| ||||| ||||| || ||| |||| ||||| || Sbjct: 353 gtacggcaaggtgcttgtgctggatggagtgattcaggtcactgagagggatgagtgtgc 412 Query: 401 ctaccaggagatgattacccaccttcctctctgctcaatcaaggatccaaagaaggtcct 460 ||||| ||||||||||||||||| || || ||||| ||||| ||||| |||||||| | Sbjct: 413 ttaccaagagatgattacccacctccccctttgctctatcaaagatcccaagaaggtgtt 472 Query: 461 ggtcataggtggcggagacggcggcgttctgcgggaggtctcacggcactcctcggtgga 520 || || || || ||||| || || ||| |||| || || ||||| || ||||||||||| Sbjct: 473 agttattggaggtggagatggtggtgttttgcgtgaagtttcacgacattcctcggtgga 532 Query: 521 gcagatcgacat 532 ||| || ||||| Sbjct: 533 gcaaattgacat 544
>dbj|AK060916.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G07, full insert sequence Length = 1297 Score = 272 bits (137), Expect = 1e-69 Identities = 359/432 (83%), Gaps = 7/432 (1%) Strand = Plus / Plus Query: 101 cgtgctctaggttttggggatggaggccgagacggcggcgaagagggcgcgggagagcga 160 ||||||||||||| | || |||||||||||| ||||||||||||||||||||||||||| Sbjct: 119 cgtgctctaggttctcgg-atggaggccgaggcggcggcgaagagggcgcgggagagcgg 177 Query: 161 tggcgctgcggcggcggcggacggagccgttgagcaggcggggatctccgccgtcatccc 220 || ||| |||||||| ||| |||| ||||||||||| ||||| ||||||||||| Sbjct: 178 tgacgcggcggcggc------cggtgccggcgagcaggcgggtatctctgccgtcatccc 231 Query: 221 cgggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtgga 280 || |||||||||||||| |||||||||||||| || ||||||||||| ||||||| || Sbjct: 232 tggatggttctccgagattagccccatgtggcctggtgaggcacactcattgaaggtcga 291 Query: 281 gaaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtcctccac 340 ||||| || |||||||| ||||| ||||||||| ||||| |||| || ||||||||||| Sbjct: 292 aaaggtactattccaaggaaagtcggactaccaaaatgtgatggtgtttcagtcctccac 351 Query: 341 ctgcgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgcgc 400 | ||| |||||||| || |||||||| ||||| ||||| || ||| |||| ||||| || Sbjct: 352 gtacggcaaggtgcttgtgctggatggagtgattcaggtcactgagagggatgagtgtgc 411 Query: 401 ctaccaggagatgattacccaccttcctctctgctcaatcaaggatccaaagaaggtcct 460 ||||| ||||||||||||||||| || || ||||| ||||| ||||| |||||||| | Sbjct: 412 ttaccaagagatgattacccacctccccctttgctctatcaaagatcccaagaaggtgtt 471 Query: 461 ggtcataggtggcggagacggcggcgttctgcgggaggtctcacggcactcctcggtgga 520 || || || || ||||| || || ||| |||| || || ||||| || ||||||||||| Sbjct: 472 agttattggaggtggagatggtggtgttttgcgtgaagtttcacgacattcctcggtgga 531 Query: 521 gcagatcgacat 532 ||| || ||||| Sbjct: 532 gcaaattgacat 543
>emb|AJ251298.1|OSA251298 Oryza sativa mRNA for spermidine synthase 1 (spdSyn1 gene) Length = 1308 Score = 264 bits (133), Expect = 3e-67 Identities = 358/432 (82%), Gaps = 7/432 (1%) Strand = Plus / Plus Query: 101 cgtgctctaggttttggggatggaggccgagacggcggcgaagagggcgcgggagagcga 160 ||||||||||||| | || |||||||||||| ||||||||||||||||||||||||||| Sbjct: 82 cgtgctctaggttctcgg-atggaggccgaggcggcggcgaagagggcgcgggagagcgg 140 Query: 161 tggcgctgcggcggcggcggacggagccgttgagcaggcggggatctccgccgtcatccc 220 || ||| |||||||| ||| |||| ||||||||||| ||||| ||||||||||| Sbjct: 141 tgacgcggcggcggc------cggtgccggcgagcaggcgggtatctctgccgtcatccc 194 Query: 221 cgggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtgga 280 || |||||||||||||| |||||||||||||| || ||||||||||| ||||||| || Sbjct: 195 tggatggttctccgagattagccccatgtggcctggtgaggcacactcattgaaggtcga 254 Query: 281 gaaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtcctccac 340 ||||| || |||||||| ||||| ||||||||| ||||| |||| || ||||||||||| Sbjct: 255 aaaggtactattccaaggaaagtcggactaccaaaatgtgatggtgtttcagtcctccac 314 Query: 341 ctgcgggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgcgc 400 | ||| ||||| || || |||||||| ||||| ||||| || ||| |||| ||||| || Sbjct: 315 gtacggcaaggttcttgtgctggatggagtgattcaggtcactgagagggatgagtgtgc 374 Query: 401 ctaccaggagatgattacccaccttcctctctgctcaatcaaggatccaaagaaggtcct 460 ||||| ||||||||||||||||| || || ||||| ||||| ||||| |||||||| | Sbjct: 375 ttaccaagagatgattacccacctccccctttgctctatcaaagatcccaagaaggtgtt 434 Query: 461 ggtcataggtggcggagacggcggcgttctgcgggaggtctcacggcactcctcggtgga 520 || || || || ||||| || || ||| |||| || || ||||| || ||||||||||| Sbjct: 435 agttattggaggtggagatggtggtgttttgcgtgaagtttcacgacattcctcggtgga 494 Query: 521 gcagatcgacat 532 ||| || ||||| Sbjct: 495 gcaaattgacat 506
>gb|BT024141.1| Zea mays clone EL01N0442H12 mRNA sequence Length = 1281 Score = 252 bits (127), Expect = 1e-63 Identities = 286/339 (84%) Strand = Plus / Plus Query: 197 ggcggggatctccgccgtcatccccgggtggttctccgagatcagccccatgtggcccgg 256 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 100 ggcggggatctccgccgtcatcccgggatggttctccgagatcagccccatgtggcccgg 159 Query: 257 cgaggcacactcgctgaaggtggagaaggtcctgttccaaggcaagtcagactaccaaga 316 ||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||||| | Sbjct: 160 tgaggcgcactctttgaaggtggagaaggtgctgttccaagggaagtcagactaccaaaa 219 Query: 317 tgtgctggttttccagtcctccacctgcgggaaggtgctcgtcctggatggggtgatcca 376 || |||| || |||||||| || | |||||||||||||||||| ||||| || || || Sbjct: 220 cgttatggtctttcagtcctctacgtacgggaaggtgctcgtccttgatggagttattca 279 Query: 377 ggtgaccgagcgggacgagtgcgcctaccaggagatgattacccaccttcctctctgctc 436 ||| || ||| |||| ||||| || ||||| |||||||| || ||||| || || ||||| Sbjct: 280 ggttacggagagggatgagtgtgcgtaccaagagatgatcactcacctgcccctttgctc 339 Query: 437 aatcaaggatccaaagaaggtcctggtcataggtggcggagacggcggcgttctgcggga 496 ||||| ||||| |||||||| |||| || || || || || || || |||||||| || Sbjct: 340 catcaaagatcccaagaaggtgttggttattggagggggtgatggtggtgttctgcgtga 399 Query: 497 ggtctcacggcactcctcggtggagcagatcgacatctg 535 ||| |||||||| ||||| ||||| || || |||||||| Sbjct: 400 ggtttcacggcattcctctgtggaacaaattgacatctg 438 Score = 48.1 bits (24), Expect = 0.030 Identities = 36/40 (90%) Strand = Plus / Plus Query: 120 atggaggccgagacggcggcgaagagggcgcgggagagcg 159 ||||||||||| ||||||| |||||| |||||||||||| Sbjct: 44 atggaggccgatgcggcggccaagaggacgcgggagagcg 83
>ref|NM_187782.1| Oryza sativa (japonica cultivar-group), mRNA Length = 963 Score = 246 bits (124), Expect = 6e-62 Identities = 341/413 (82%), Gaps = 9/413 (2%) Strand = Plus / Plus Query: 120 atggaggccgagacggcggcgaagagggcgcgggagagcgatggcgctgcggcggcggcg 179 |||||||||||| ||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 1 atggaggccgaggcggcggcgaagagggcgcgggagagcggtgacgcggcggcggc---- 56 Query: 180 gacggagccgttgagcaggcggggatctccgccgtcatccccgggtggttctccgagatc 239 ||| |||| ||||||||||| ||||| ||||||||||| || |||||||||||||| Sbjct: 57 --cggtgccggcgagcaggcgggtatctctgccgtcatccctggatggttctccgagatt 114 Query: 240 agccccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcctgttccaaggc 299 |||||||||||||| | |||||||||| ||||||| || ||||| || |||||||| Sbjct: 115 agccccatgtggcctg---aggcacactcattgaaggtcgaaaaggtactattccaagga 171 Query: 300 aagtcagactaccaagatgtgctggttttccagtcctccacctgcgggaaggtgctcgtc 359 ||||| ||||||||| ||||| |||| || ||||||||||| | ||| |||||||| || Sbjct: 172 aagtcggactaccaaaatgtgatggtgtttcagtcctccacgtacggcaaggtgcttgtg 231 Query: 360 ctggatggggtgatccaggtgaccgagcgggacgagtgcgcctaccaggagatgattacc 419 |||||||| ||||| ||||| || ||| |||| ||||| || ||||| |||||||||||| Sbjct: 232 ctggatggagtgattcaggtcactgagagggatgagtgtgcttaccaagagatgattacc 291 Query: 420 caccttcctctctgctcaatcaaggatccaaagaaggtcctggtcataggtggcggagac 479 ||||| || || ||||| ||||| ||||| |||||||| | || || || || ||||| Sbjct: 292 cacctccccctttgctctatcaaagatcccaagaaggtgttagttattggaggtggagat 351 Query: 480 ggcggcgttctgcgggaggtctcacggcactcctcggtggagcagatcgacat 532 || || ||| |||| || || ||||| || |||||||||||||| || ||||| Sbjct: 352 ggtggtgttttgcgtgaagtttcacgacattcctcggtggagcaaattgacat 404
>gb|AY103592.1| Zea mays PCO075678 mRNA sequence Length = 1471 Score = 244 bits (123), Expect = 2e-61 Identities = 285/339 (84%) Strand = Plus / Plus Query: 197 ggcggggatctccgccgtcatccccgggtggttctccgagatcagccccatgtggcccgg 256 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 159 ggcggggatctccgccgtcatcccgggatggttctccgagatcagccccatgtggcccgg 218 Query: 257 cgaggcacactcgctgaaggtggagaaggtcctgttccaaggcaagtcagactaccaaga 316 ||||| ||||| |||||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 219 tgaggcgcactctttgaaggtggacaaggtgctgttccaagggaagtcagactaccaaag 278 Query: 317 tgtgctggttttccagtcctccacctgcgggaaggtgctcgtcctggatggggtgatcca 376 || |||| || |||||||| || | |||||||||||||||||| ||||| || || || Sbjct: 279 cgttatggtctttcagtcctctacgtacgggaaggtgctcgtcctcgatggagttattca 338 Query: 377 ggtgaccgagcgggacgagtgcgcctaccaggagatgattacccaccttcctctctgctc 436 |||||| ||| |||| ||||| || ||||| |||||||| || ||||| || || ||||| Sbjct: 339 ggtgacggagagggatgagtgtgcgtaccaagagatgatcactcacctgcccctttgctc 398 Query: 437 aatcaaggatccaaagaaggtcctggtcataggtggcggagacggcggcgttctgcggga 496 ||||| || || |||||||| |||| || || || || ||||| || |||||||| || Sbjct: 399 catcaaagaccccaagaaggtgttggttattggagggggtgacggtggtgttctgcgtga 458 Query: 497 ggtctcacggcactcctcggtggagcagatcgacatctg 535 ||| |||||||| ||||| ||||| || || |||||||| Sbjct: 459 ggtttcacggcattcctctgtggaacaaattgacatctg 497
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%), Gaps = 6/136 (4%) Strand = Plus / Minus Query: 118 ggatggaggccgagacggcggcgaagagggcgcgggagagcgatggcgctgcggcggcgg 177 |||||||||||||| ||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 12669008 ggatggaggccgaggcggcggcgaagagggcgcgggagagcggtgacgcggcggcggc-- 12668951 Query: 178 cggacggagccgttgagcaggcggggatctccgccgtcatccccgggtggttctccgaga 237 ||| |||| ||||||||||| ||||| ||||||||||| || ||||||||||||| Sbjct: 12668950 ----cggtgccggcgagcaggcgggtatctctgccgtcatccctggatggttctccgaga 12668895 Query: 238 tcagccccatgtggcc 253 | |||||||||||||| Sbjct: 12668894 ttagccccatgtggcc 12668879 Score = 95.6 bits (48), Expect = 1e-16 Identities = 111/132 (84%) Strand = Plus / Minus Query: 326 tttccagtcctccacctgcgggaaggtgctcgtcctggatggggtgatccaggtgaccga 385 |||| |||||||||| | ||| |||||||| || |||||||| ||||| ||||| || || Sbjct: 12667739 tttctagtcctccacgtacggcaaggtgcttgtgctggatggagtgattcaggtcactga 12667680 Query: 386 gcgggacgagtgcgcctaccaggagatgattacccaccttcctctctgctcaatcaagga 445 | |||| ||||| || ||||| ||||||||||||||||| || || ||||| ||||| || Sbjct: 12667679 gagggatgagtgtgcttaccaagagatgattacccacctccccctttgctctatcaaaga 12667620 Query: 446 tccaaagaaggt 457 ||| |||||||| Sbjct: 12667619 tcccaagaaggt 12667608 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 258 gaggcacactcgctgaaggtggagaaggtcctgttccaaggcaagtcagactaccaagat 317 ||||||||||| ||||||| || ||||| || |||||||| ||||| ||||||||| || Sbjct: 12667895 gaggcacactcattgaaggtcgaaaaggtactattccaaggaaagtcggactaccaaaat 12667836 Query: 318 gtgctggt 325 ||| |||| Sbjct: 12667835 gtgatggt 12667828 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gctgcggcggcggcggacgg 184 |||||||||||||||||||| Sbjct: 28832178 gctgcggcggcggcggacgg 28832197 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcgtcgtcgtcgtgctctag 110 |||||||||||||||||||| Sbjct: 2103509 tcgtcgtcgtcgtgctctag 2103528
>dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0492E07 Length = 143794 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%), Gaps = 6/136 (4%) Strand = Plus / Minus Query: 118 ggatggaggccgagacggcggcgaagagggcgcgggagagcgatggcgctgcggcggcgg 177 |||||||||||||| ||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 43478 ggatggaggccgaggcggcggcgaagagggcgcgggagagcggtgacgcggcggcggc-- 43421 Query: 178 cggacggagccgttgagcaggcggggatctccgccgtcatccccgggtggttctccgaga 237 ||| |||| ||||||||||| ||||| ||||||||||| || ||||||||||||| Sbjct: 43420 ----cggtgccggcgagcaggcgggtatctctgccgtcatccctggatggttctccgaga 43365 Query: 238 tcagccccatgtggcc 253 | |||||||||||||| Sbjct: 43364 ttagccccatgtggcc 43349 Score = 95.6 bits (48), Expect = 1e-16 Identities = 111/132 (84%) Strand = Plus / Minus Query: 326 tttccagtcctccacctgcgggaaggtgctcgtcctggatggggtgatccaggtgaccga 385 |||| |||||||||| | ||| |||||||| || |||||||| ||||| ||||| || || Sbjct: 42209 tttctagtcctccacgtacggcaaggtgcttgtgctggatggagtgattcaggtcactga 42150 Query: 386 gcgggacgagtgcgcctaccaggagatgattacccaccttcctctctgctcaatcaagga 445 | |||| ||||| || ||||| ||||||||||||||||| || || ||||| ||||| || Sbjct: 42149 gagggatgagtgtgcttaccaagagatgattacccacctccccctttgctctatcaaaga 42090 Query: 446 tccaaagaaggt 457 ||| |||||||| Sbjct: 42089 tcccaagaaggt 42078 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 258 gaggcacactcgctgaaggtggagaaggtcctgttccaaggcaagtcagactaccaagat 317 ||||||||||| ||||||| || ||||| || |||||||| ||||| ||||||||| || Sbjct: 42365 gaggcacactcattgaaggtcgaaaaggtactattccaaggaaagtcggactaccaaaat 42306 Query: 318 gtgctggt 325 ||| |||| Sbjct: 42305 gtgatggt 42298
>emb|Y08253.1|DSSS2 D.stramonium mRNA for spermidine synthase 2 Length = 1217 Score = 77.8 bits (39), Expect = 3e-11 Identities = 171/215 (79%) Strand = Plus / Plus Query: 225 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 284 |||||||||||||| |||||| | ||||| || || ||||||||| ||||||| |||||| Sbjct: 129 tggttctccgagattagccccctctggcctggggaagcacactcgttgaaggttgagaag 188 Query: 285 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtcctccacctgc 344 | |||| || || ||||| || ||||||||||| ||||||| ||||| | || | Sbjct: 189 atattgtttcaggggaagtctgattaccaagatgtcatggtttttcagtcaacaacttat 248 Query: 345 gggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgcgcctac 404 || |||||||| || ||||||| |||||||| | |||||| |||| || || || ||| Sbjct: 249 ggaaaggtgcttgttttggatggtgtgatccaacttaccgagagggatgaatgtgcttac 308 Query: 405 caggagatgattacccaccttcctctctgctcaat 439 || |||||||| || || |||||||| || ||||| Sbjct: 309 caagagatgatcactcatcttcctctttgttcaat 343
>dbj|AB015599.1| Coffea arabica mRNA for spermidine synthase, complete cds Length = 1383 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 225 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 284 ||||| || ||||||||||| |||||||| || |||||||||||||| ||||| || ||| Sbjct: 113 tggttttctgagatcagcccaatgtggcctggagaggcacactcgctaaaggtagaaaag 172 Query: 285 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtcctccacctgc 344 | || ||||| || || || || ||||| |||| |||| || ||||| || |||| | Sbjct: 173 atactattccagggaaaatctgattaccagaatgtcatggtctttcagtcatcaacctac 232 Query: 345 gggaaggtgct 355 ||||||||||| Sbjct: 233 gggaaggtgct 243
>dbj|AB006690.1| Hyoscyamus niger mRNA for spermidine synthase 1, complete cds Length = 1213 Score = 61.9 bits (31), Expect = 2e-06 Identities = 151/191 (79%) Strand = Plus / Plus Query: 225 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 284 |||||||| ||||| |||||| | ||||| || || |||||||| ||||||| |||||| Sbjct: 131 tggttctctgagattagccccctttggcctggggaagcacactccttgaaggttgagaag 190 Query: 285 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtcctccacctgc 344 | |||| || || || || ||||||||| |||| ||||||||||||| || || | Sbjct: 191 atattgtttcagggaaaatctgactaccaaaatgtcatggttttccagtcatcaacttat 250 Query: 345 gggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgcgcctac 404 || |||||||| || ||||||| |||||||| | |||||| |||| || || || ||| Sbjct: 251 ggaaaggtgcttgttttggatggtgtgatccaacttaccgagagggatgaatgtgcttac 310 Query: 405 caggagatgat 415 || |||||||| Sbjct: 311 caagagatgat 321
>dbj|AB225678.1| Aspergillus oryzae cDNA, contig sequence: AoEST2533 Length = 529 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 451 agaaggtcctggtcataggtggcggagacggcggcgttctgcgggaggtc 500 |||||||||||||||| ||||| ||||||||||| ||||| || |||||| Sbjct: 304 agaaggtcctggtcatcggtggtggagacggcggtgttctccgtgaggtc 353 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 384 gagcgggacgagtgcgcctaccaggagatgattacccacct 424 |||||||| |||| | |||||||||||||||| |||||||| Sbjct: 237 gagcgggatgagttctcctaccaggagatgatcacccacct 277
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 451 agaaggtcctggtcataggtggcggagacggcggcgttctgcgggaggtc 500 |||||||||||||||| ||||| ||||||||||| ||||| || |||||| Sbjct: 1347662 agaaggtcctggtcatcggtggtggagacggcggtgttctccgtgaggtc 1347613 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 ctaccaggagatgattacccacct 424 ||||||||||||||| |||||||| Sbjct: 1347712 ctaccaggagatgatcacccacct 1347689
>gb|AC007872.3| The sequence of an Aspergillus parasiticus cosmid containing spermidine synthase, complete sequence Length = 33952 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 451 agaaggtcctggtcataggtggcggagacggcggcgttctgcgggaggtc 500 |||||||||||||||| ||||| ||||||||||| ||||| || |||||| Sbjct: 229 agaaggtcctggtcatcggtggtggagacggcggtgttctccgtgaggtc 278 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 ctaccaggagatgattacccacct 424 ||||||||||||||| |||||||| Sbjct: 179 ctaccaggagatgatcacccacct 202
>dbj|AB072916.2| Malus x domestica MdSPDS2a mRNA forspermidine synthase, complete cds Length = 1359 Score = 60.0 bits (30), Expect = 8e-06 Identities = 105/130 (80%) Strand = Plus / Plus Query: 205 tctccgccgtcatccccgggtggttctccgagatcagccccatgtggcccggcgaggcac 264 ||||||| || || ||||| ||||| || ||||| ||||| |||||||| || ||||||| Sbjct: 222 tctccgctgttattcccggctggttttctgagattagcccaatgtggccaggagaggcac 281 Query: 265 actcgctgaaggtggagaaggtcctgttccaaggcaagtcagactaccaagatgtgctgg 324 |||| ||||| | |||||| | |||| ||||| ||||| ||||| || ||||| ||| Sbjct: 282 actccttgaagatagagaagattttgtttcaaggaaagtccgactatcagaatgtgatgg 341 Query: 325 ttttccagtc 334 | |||||||| Sbjct: 342 tcttccagtc 351
>emb|AM177608.1| Calystegia sepium mRNA for putrescine N-methyltransferase (pmt gene) Length = 1035 Score = 60.0 bits (30), Expect = 8e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 222 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 281 |||||||| |||||| |||||| |||||||||||||| ||| ||| || ||| | ||| Sbjct: 172 gggtggttttccgagttcagccaaatgtggcccggcgaagcattctcactcaagatagag 231 Query: 282 aaggtcctgttccaaggcaagtcagactaccaagatgt 319 ||| | || |||||||| ||||| || ||||||||||| Sbjct: 232 aagctactattccaaggaaagtctgattaccaagatgt 269
>ref|XM_504715.1| Yarrowia lipolytica CLIB122, YALI0E33143g predicted mRNA Length = 879 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 372 atccaggtgaccgagcgggacgagtgcgcctaccaggagatgatt 416 ||||||| |||||||| ||||||| ||||||||||||||||||| Sbjct: 187 atccaggccaccgagcgagacgagtacgcctaccaggagatgatt 231
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 372 atccaggtgaccgagcgggacgagtgcgcctaccaggagatgatt 416 ||||||| |||||||| ||||||| ||||||||||||||||||| Sbjct: 3935226 atccaggccaccgagcgagacgagtacgcctaccaggagatgatt 3935182
>gb|AF298195.1|AF298195 Leishmania donovani spermidine synthase gene, complete cds Length = 903 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 244 ccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcctgt 291 |||||||||||||| ||||||| |||||||||||||||||| |||| Sbjct: 50 ccatgtggcccggccaggcacaggggctgaaggtggagaaggttctgt 97
>dbj|AB006693.1| Arabidopsis thaliana mRNA for spermidine synthase, partial cds Length = 1068 Score = 54.0 bits (27), Expect = 5e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 224 gtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaa 283 ||||||||| ||||| || || |||||||| || || ||||| || || ||||| ||||| Sbjct: 11 gtggttctctgagattagtcctatgtggccaggagaagcacattctctcaaggtagagaa 70 Query: 284 ggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 334 | | || |||||||| || ||||| ||||| ||||| | ||||||||||| Sbjct: 71 gattctattccaagggaaatcagattaccaggatgttattgttttccagtc 121
>dbj|AB100310.1| Petunia x hybrida spds mRNA for spermidine synthase, complete cds Length = 1249 Score = 54.0 bits (27), Expect = 5e-04 Identities = 168/215 (78%) Strand = Plus / Plus Query: 225 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 284 |||||||| ||||| |||||| | ||||| || || |||||||| |||||||||||||| Sbjct: 154 tggttctctgagattagccccctttggcctggggaagcacactcattgaaggtggagaag 213 Query: 285 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtcctccacctgc 344 | |||| || || ||||| || || || |||| ||||||| ||||| || || | Sbjct: 214 attttgtttcaggggaagtctgattatcagaatgtcatggtttttcagtcatcaacttat 273 Query: 345 gggaaggtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgcgcctac 404 || |||||||| || ||||||| |||||||| | || ||| |||| || || || ||| Sbjct: 274 ggaaaggtgcttgttttggatggtgtgatccaactcactgagagggatgaatgtgcttac 333 Query: 405 caggagatgattacccaccttcctctctgctcaat 439 || ||||||||||| || |||||||| || ||||| Sbjct: 334 caagagatgattactcatcttcctctttgttcaat 368
>ref|NM_105699.2| Arabidopsis thaliana SPDS2 (SPERMIDINE SYNTHASE 2) AT1G70310 (SPDS2) mRNA, complete cds Length = 1275 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 225 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 284 |||||||| ||||| || || |||||||| || || ||||| || || ||||| |||||| Sbjct: 212 tggttctctgagattagtcctatgtggccaggagaagcacattctctcaaggtagagaag 271 Query: 285 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 334 | || |||||||| || ||||| ||||| ||||| | ||||||||||| Sbjct: 272 attctattccaagggaaatcagattaccaggatgttattgttttccagtc 321
>gb|BT020360.1| Arabidopsis thaliana At1g70310 gene, complete cds Length = 1023 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 225 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 284 |||||||| ||||| || || |||||||| || || ||||| || || ||||| |||||| Sbjct: 151 tggttctctgagattagtcctatgtggccaggagaagcacattctctcaaggtagagaag 210 Query: 285 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 334 | || |||||||| || ||||| ||||| ||||| | ||||||||||| Sbjct: 211 attctattccaagggaaatcagattaccaggatgttattgttttccagtc 260
>ref|XM_883450.1| Leishmania major strain Friedlin spermidine synthase (L3291.03) partial mRNA Length = 903 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 244 ccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcct 289 |||||||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 50 ccatgtggcccggccaggcacaggggctcaaggtggagaaggtcct 95
>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end Length = 247462 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 244 ccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcct 289 |||||||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 14639 ccatgtggcccggccaggcacaggggctcaaggtggagaaggtcct 14594
>emb|AJ251297.1|ATH251297 Arabidopsis thaliana mRNA for spermidine synthase 2 (spdSyn2 gene) Length = 1225 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 225 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 284 |||||||| ||||| || || |||||||| || || ||||| || || ||||| |||||| Sbjct: 183 tggttctctgagattagtcctatgtggccaggagaagcacattctctcaaggtagagaag 242 Query: 285 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 334 | || |||||||| || ||||| ||||| ||||| | ||||||||||| Sbjct: 243 attctattccaagggaaatcagattaccaggatgttattgttttccagtc 292
>gb|AF375409.1| Arabidopsis thaliana At1g70310/F17O7_16 mRNA, complete cds Length = 1267 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 225 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 284 |||||||| ||||| || || |||||||| || || ||||| || || ||||| |||||| Sbjct: 211 tggttctctgagattagtcctatgtggccaggagaagcacattctctcaaggtagagaag 270 Query: 285 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 334 | || |||||||| || ||||| ||||| ||||| | ||||||||||| Sbjct: 271 attctattccaagggaaatcagattaccaggatgttattgttttccagtc 320
>emb|BX816602.1|CNS0AD0G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZC12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1203 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 225 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 284 |||||||| ||||| || || |||||||| || || ||||| || || ||||| |||||| Sbjct: 198 tggttctctgagattagtcctatgtggccaggagaagcacattctctcaaggtagagaag 257 Query: 285 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 334 | || |||||||| || ||||| ||||| ||||| | ||||||||||| Sbjct: 258 attctattccaagggaaatcagattaccaggatgttattgttttccagtc 307
>dbj|AB072915.2| Malus x domestica MdSPDS1 mRNA forspermidine synthase, complete cds Length = 1407 Score = 52.0 bits (26), Expect = 0.002 Identities = 104/130 (80%) Strand = Plus / Plus Query: 205 tctccgccgtcatccccgggtggttctccgagatcagccccatgtggcccggcgaggcac 264 ||||||| ||||| ||||| ||||| || ||||| ||| | |||||||| || ||||||| Sbjct: 265 tctccgctgtcattcccggctggttttctgagattagctcaatgtggccaggagaggcac 324 Query: 265 actcgctgaaggtggagaaggtcctgttccaaggcaagtcagactaccaagatgtgctgg 324 |||| ||||| | |||||| | |||| || || ||||| ||||| || ||||| ||| Sbjct: 325 actccttgaagatagagaagattttgtttcagggaaagtccgactatcagaatgtgatgg 384 Query: 325 ttttccagtc 334 | |||||||| Sbjct: 385 tcttccagtc 394
>ref|NM_202171.1| Arabidopsis thaliana SPDS1 (SPERMIDINE SYNTHASE 1) AT1G23820 (SPDS1) transcript variant AT1G23820.2 mRNA, complete cds Length = 1347 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 222 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 281 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| ||| Sbjct: 259 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggttgag 318 Query: 282 aaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 334 || || |||| ||||| || ||||| || || ||||| | ||||||||||| Sbjct: 319 aaagttttgtttcaagggaaatcagattatcaggatgttattgttttccagtc 371
>ref|NM_102230.3| Arabidopsis thaliana SPDS1 (SPERMIDINE SYNTHASE 1) AT1G23820 (SPDS1) transcript variant AT1G23820.1 mRNA, complete cds Length = 1359 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 222 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 281 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| ||| Sbjct: 259 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggttgag 318 Query: 282 aaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 334 || || |||| ||||| || ||||| || || ||||| | ||||||||||| Sbjct: 319 aaagttttgtttcaagggaaatcagattatcaggatgttattgttttccagtc 371
>gb|AY646352.1| Cucumis sativus spermidine synthase mRNA, complete cds Length = 1398 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 240 agccccatgtggcccggcgaggcacactcgctgaaggtggagaaggtcctgttccaaggc 299 ||||| |||||||| || ||||| ||||| |||||||||||||||| |||| ||||| Sbjct: 180 agcccaatgtggcctggagaggctcactccttgaaggtggagaaggttttgtttcaaggg 239 Query: 300 aagtc 304 ||||| Sbjct: 240 aagtc 244
>emb|AJ251296.1|ATH251296 Arabidopsis thaliana mRNA for spermidine synthase 1 (spdSyn1 gene) Length = 1218 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 222 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 281 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| ||| Sbjct: 193 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggttgag 252 Query: 282 aaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 334 || || |||| ||||| || ||||| || || ||||| | ||||||||||| Sbjct: 253 aaagttttgtttcaagggaaatcagattatcaggatgttattgttttccagtc 305
>gb|AY093360.1| Arabidopsis thaliana strong similarity to spermidine synthase (At1g23820) mRNA, complete cds Length = 1125 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 222 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 281 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| ||| Sbjct: 136 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggttgag 195 Query: 282 aaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 334 || || |||| ||||| || ||||| || || ||||| | ||||||||||| Sbjct: 196 aaagttttgtttcaagggaaatcagattatcaggatgttattgttttccagtc 248
>gb|AY062593.1| Arabidopsis thaliana Strong similarity to spermidine synthase (At1g23820; F5O8.38) mRNA, complete cds Length = 1258 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 222 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 281 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| ||| Sbjct: 204 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggttgag 263 Query: 282 aaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 334 || || |||| ||||| || ||||| || || ||||| | ||||||||||| Sbjct: 264 aaagttttgtttcaagggaaatcagattatcaggatgttattgttttccagtc 316
>gb|AF337636.1|AF337636 Rattus norvegicus spermidine synthase mRNA, complete cds Length = 1268 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 351 gtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgcgcctaccaggag 410 ||||| || |||||||| || |||||| |||||| ||||||||| | ||||||||||| Sbjct: 249 gtgctggttctggatggcgtcatccagtgtaccgagagggacgagttctcctaccaggag 308 Query: 411 atgat 415 ||||| Sbjct: 309 atgat 313
>emb|BX814923.1|CNS0ABBK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS19ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1259 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 222 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 281 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| ||| Sbjct: 192 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggtcgag 251 Query: 282 aaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 334 || || |||| ||||| || ||||| || || ||||| | ||||||||||| Sbjct: 252 aaagttttgtttcaagggaaatcagattatcaggatgttattgttttccagtc 304
>ref|NM_053464.1| Rattus norvegicus spermidine synthase (Srm), mRNA Length = 1268 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 351 gtgctcgtcctggatggggtgatccaggtgaccgagcgggacgagtgcgcctaccaggag 410 ||||| || |||||||| || |||||| |||||| ||||||||| | ||||||||||| Sbjct: 249 gtgctggttctggatggcgtcatccagtgtaccgagagggacgagttctcctaccaggag 308 Query: 411 atgat 415 ||||| Sbjct: 309 atgat 313
>gb|AY705438.1| Silene latifolia spermidine synthase Y gene, partial cds Length = 4133 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 261 gcacactcgctgaaggtggagaaggtcctgttccaaggcaagtca 305 ||||| || ||||| ||||||||| ||||||||||||| |||||| Sbjct: 1615 gcacattccctgaaagtggagaagatcctgttccaagggaagtca 1659
>gb|AY705436.1| Silene vulgaris spermidine synthase gene, partial cds Length = 3533 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 261 gcacactcgctgaaggtggagaaggtcctgttccaaggcaagtca 305 ||||| || ||||| ||||||||| ||||||||||||| |||||| Sbjct: 1137 gcacattccctgaaagtggagaagatcctgttccaagggaagtca 1181
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 127 ccgagacggcggcgaagagggcgc 150 |||||||||||||||||||||||| Sbjct: 2661789 ccgagacggcggcgaagagggcgc 2661766
>ref|XM_955814.1| Neurospora crassa OR74A SPERMIDINE SYNTHASE (PUTRESCINE AMINOPROPYLTRANSFERASE) (SPDSY) (NCU06727.1) partial mRNA Length = 876 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 381 accgagcgggacgagtgcgcctaccaggagatgattacccacct 424 |||||||| || |||| | |||||||||||||||| |||||||| Sbjct: 193 accgagcgcgatgagttctcctaccaggagatgatcacccacct 236
>ref|XM_327012.1| Neurospora crassa OR74A SPERMIDINE SYNTHASE (PUTRESCINE AMINOPROPYLTRANSFERASE) (SPDSY) (NCU06727.1) partial mRNA Length = 876 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 381 accgagcgggacgagtgcgcctaccaggagatgattacccacct 424 |||||||| || |||| | |||||||||||||||| |||||||| Sbjct: 193 accgagcgcgatgagttctcctaccaggagatgatcacccacct 236
>ref|XM_653199.1| Aspergillus nidulans FGSC A4 spermidine synthase (AN0687.2), mRNA Length = 879 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 381 accgagcgggacgagtgcgcctaccaggagatgattacccacct 424 |||||||| || |||| | |||||||||| |||||||||||||| Sbjct: 193 accgagcgtgatgagttctcctaccaggaaatgattacccacct 236
>emb|BX294092.1|NCB11H7 Neurospora crassa DNA linkage group V BAC clone B11H7 Length = 74977 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Minus Query: 381 accgagcgggacgagtgcgcctaccaggagatgattacccacct 424 |||||||| || |||| | |||||||||||||||| |||||||| Sbjct: 53441 accgagcgcgatgagttctcctaccaggagatgatcacccacct 53398
>emb|AJ006414.1|LES6414 Lycopersicon esculentum mRNA for spermidine synthase Length = 1269 Score = 48.1 bits (24), Expect = 0.030 Identities = 120/152 (78%) Strand = Plus / Plus Query: 225 tggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggagaag 284 |||||||| ||||| |||||| | ||||| || || |||||||| ||||||| |||||| Sbjct: 259 tggttctctgagattagccccctttggcctggggaagcacactcattgaaggttgagaag 318 Query: 285 gtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtcctccacctgc 344 | |||| || || ||||| || ||||| |||| ||||||| ||||| || || | Sbjct: 319 atattgtttcaggggaagtctgattaccagaatgtcttggtttttcagtcatcaacttat 378 Query: 345 gggaaggtgctcgtcctggatggggtgatcca 376 ||||||||||| || ||||||| |||||||| Sbjct: 379 gggaaggtgcttgttttggatggtgtgatcca 410
>gb|AF005842.1|AF005842 Rhodobacter sphaeroides C4-dicarboxylate binding-protein precursor (dctP), small integral membrane transport protein (dctQ) and large integral membrane transport protein (dctM) genes, complete cds Length = 3718 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 127 ccgagacggcggcgaagagggcgc 150 |||||||||||||||||||||||| Sbjct: 2223 ccgagacggcggcgaagagggcgc 2200
>dbj|AB001598.1| Neurospora crassa gene for spermidine synthase, complete cds Length = 3370 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 381 accgagcgggacgagtgcgcctaccaggagatgattacccacct 424 |||||||| || |||| | |||||||||||||||| |||||||| Sbjct: 1141 accgagcgcgatgagttctcctaccaggagatgatcacccacct 1184
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 34 tccccactctccacccagccgccgccg 60 |||||||||||| |||||||||||||| Sbjct: 2801450 tccccactctccccccagccgccgccg 2801424 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 gcgatggcgctgcggcggcggcgg 180 |||||||||| ||||||||||||| Sbjct: 30618375 gcgatggcgcggcggcggcggcgg 30618352 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 cgccgtcatccccgggtggt 228 |||||||||||||||||||| Sbjct: 14308968 cgccgtcatccccgggtggt 14308987
>ref|XM_756872.1| Ustilago maydis 521 hypothetical protein (UM05818.1) partial mRNA Length = 2310 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 381 accgagcgggacgagtgcgcctaccaggagatgattacccaccttcc 427 |||||||| ||||||| ||||||||||||||||| | |||||||| Sbjct: 193 accgagcgcgacgagttttcctaccaggagatgattgctcaccttcc 239
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 34 tccccactctccacccagccgccgccg 60 |||||||||||| |||||||||||||| Sbjct: 2801561 tccccactctccccccagccgccgccg 2801535 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 gcgatggcgctgcggcggcggcgg 180 |||||||||| ||||||||||||| Sbjct: 30709797 gcgatggcgcggcggcggcggcgg 30709774 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 cgccgtcatccccgggtggt 228 |||||||||||||||||||| Sbjct: 14303943 cgccgtcatccccgggtggt 14303962
>ref|XM_342423.2| PREDICTED: Rattus norvegicus similar to spermidine synthase (LOC362121), mRNA Length = 918 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 381 accgagcgggacgagtgcgcctaccaggagatgat 415 |||||| ||||||||| | |||||||||||||||| Sbjct: 301 accgagagggacgagttctcctaccaggagatgat 335
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 34 tccccactctccacccagccgccgccg 60 |||||||||||| |||||||||||||| Sbjct: 73406 tccccactctccccccagccgccgccg 73380
>gb|AF126809.1|AF126809 Nicotiana tabacum cultivar Xanthi putrescine N-methyltransferase (PMT2) gene, complete cds Length = 3091 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 273 aaggtggagaaggtcctgttccaaggcaagtcagactaccaagatgt 319 ||||| |||||| | |||||||| || ||||| |||||||||||||| Sbjct: 1545 aaggttgagaagttactgttccaggggaagtctgactaccaagatgt 1591
>dbj|AB004322.2| Nicotiana sylvestris NsPMT1 gene for putrescine N-methyltransferase, complete cds Length = 2683 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 273 aaggtggagaaggtcctgttccaaggcaagtcagactaccaagatgt 319 ||||| |||||| | |||||||| || ||||| |||||||||||||| Sbjct: 1099 aaggttgagaagttactgttccaggggaagtctgactaccaagatgt 1145
>ref|XM_468128.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1775 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 168 gcggcggcggcggacggagccg 189 |||||||||||||||||||||| Sbjct: 897 gcggcggcggcggacggagccg 918
>ref|XM_445476.1| Candida glabrata CBS138, CAGL0D01408g partial mRNA Length = 882 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 384 gagcgggacgagtgcgcctaccaggagatgattaccca 421 ||||| ||||||| | |||||||||||||||| ||||| Sbjct: 199 gagcgtgacgagttctcctaccaggagatgatcaccca 236
>emb|Z11920.1|OSHSP82A O.sativa gene for heat shock protein 82 HSP82 Length = 5310 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 160 atggcgctgcggcggcggcgga 181 |||||||||||||||||||||| Sbjct: 928 atggcgctgcggcggcggcgga 907
>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence Length = 651701 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 384 gagcgggacgagtgcgcctaccaggagatgattaccca 421 ||||| ||||||| | |||||||||||||||| ||||| Sbjct: 157981 gagcgtgacgagttctcctaccaggagatgatcaccca 158018
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 atggcgctgcggcggcggcgga 181 |||||||||||||||||||||| Sbjct: 24716200 atggcgctgcggcggcggcgga 24716221 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 17352738 gccgagctgacctcgtcgtcgtcgt 17352762 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 16466870 gccgagctgacctcgtcgtcgtcgt 16466894 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 13858545 gccgagctgacctcgtcgtcgtcgt 13858521
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 gcggcggcggcggacggagccg 189 |||||||||||||||||||||| Sbjct: 33241192 gcggcggcggcggacggagccg 33241171 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 10480124 gccgagctgacctcgtcgtcgtcgt 10480100
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 atggcgctgcggcggcggcgga 181 |||||||||||||||||||||| Sbjct: 17001 atggcgctgcggcggcggcgga 17022
>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A06 Length = 92836 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 atggcgctgcggcggcggcgga 181 |||||||||||||||||||||| Sbjct: 88504 atggcgctgcggcggcggcgga 88525
>dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_D08 Length = 163702 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 gcggcggcggcggacggagccg 189 |||||||||||||||||||||| Sbjct: 70501 gcggcggcggcggacggagccg 70480
>dbj|AK105110.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F08, full insert sequence Length = 1775 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 168 gcggcggcggcggacggagccg 189 |||||||||||||||||||||| Sbjct: 897 gcggcggcggcggacggagccg 918
>ref|NM_197876.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0027L23.17), mRNA Length = 468 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 gatggcgctgcggcggcggcg 179 ||||||||||||||||||||| Sbjct: 316 gatggcgctgcggcggcggcg 336
>ref|NM_195918.1| Oryza sativa (japonica cultivar-group) putative retroelement (OSJNAb0078C13.2), mRNA Length = 4500 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 3026 gccgagctgacctcgtcgtcgtcgt 3002
>ref|XM_514381.1| PREDICTED: Pan troglodytes similar to mannan-binding lectin serine protease 2 isoform 1 precursor; MBL-associated plasma protein of 19 kD; small MBL-associated protein; MBL-associated protein MAp19 (LOC457943), mRNA Length = 2172 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 390 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 434 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 262 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 306
>gb|BT018573.1| Zea mays clone EL01N0443D05.d mRNA sequence Length = 1450 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 tgcggcggcggcggacggagc 187 ||||||||||||||||||||| Sbjct: 458 tgcggcggcggcggacggagc 438
>gb|BC033106.1| Homo sapiens spermidine synthase, mRNA (cDNA clone MGC:45687 IMAGE:5420683), complete cds Length = 1225 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 390 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 434 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 246 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 290
>gb|BC000309.2| Homo sapiens spermidine synthase, mRNA (cDNA clone MGC:8422 IMAGE:2820975), complete cds Length = 1259 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 390 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 434 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 280 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 324
>gb|BT014416.1| Lycopersicon esculentum clone 133724F, mRNA sequence Length = 1353 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 399 gcctaccaggagatgattacccaccttcctctctgctcaatcaaggatccaaagaaggtc 458 ||||| ||||||||||| |||| |||||||| || |||||||| ||| |||||||| Sbjct: 686 gcctatcaggagatgatagcccatcttcctctttgttcaatcaaatctcctaagaaggtt 745 Query: 459 ctggt 463 ||||| Sbjct: 746 ctggt 750
>ref|NM_003132.2| Homo sapiens spermidine synthase (SRM), mRNA Length = 1273 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 390 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 434 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 314 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 358
>ref|XM_390425.1| Gibberella zeae PH-1 chromosome 1 SPEE_NEUCR Spermidine synthase (Putrescine aminopropyltransferase) (SPDSY) (FG10249.1) partial mRNA Length = 885 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 381 accgagcgggacgagtgcgcctaccaggagatgattacccacctt 425 |||||||| || |||| | ||||||||||||||||| | |||||| Sbjct: 199 accgagcgtgatgagttctcctaccaggagatgattgctcacctt 243
>emb|CT026474.3| Macaca mulatta chromosome 9 BAC CH250-270M9, complete sequence Length = 168693 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 ctccccactctccacccagcc 53 ||||||||||||||||||||| Sbjct: 28589 ctccccactctccacccagcc 28609
>ref|XM_801758.1| Trypanosoma cruzi strain CL Brener spermidine synthase (Tc00.1047053510337.40) partial mRNA Length = 891 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 463 tcataggtggcggagacggcggcgttctgcgggaggt 499 |||| ||||| || ||||||||||| ||||||||||| Sbjct: 278 tcattggtggtggggacggcggcgtactgcgggaggt 314
>ref|XM_806179.1| Trypanosoma cruzi strain CL Brener spermidine synthase (Tc00.1047053510339.50) partial mRNA Length = 891 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 463 tcataggtggcggagacggcggcgttctgcgggaggt 499 |||| ||||| || ||||||||||| ||||||||||| Sbjct: 278 tcattggtggtggggacggcggcgtactgcgggaggt 314
>ref|XM_806632.1| Trypanosoma cruzi strain CL Brener spermidine synthase (Tc00.1047053503855.20) partial mRNA Length = 891 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 463 tcataggtggcggagacggcggcgttctgcgggaggt 499 |||| ||||| || ||||||||||| ||||||||||| Sbjct: 278 tcattggtggtggggacggcggcgtactgcgggaggt 314
>ref|XM_811778.1| Trypanosoma cruzi strain CL Brener spermidine synthase (Tc00.1047053504033.130) partial mRNA Length = 891 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 463 tcataggtggcggagacggcggcgttctgcgggaggt 499 |||| ||||| || ||||||||||| ||||||||||| Sbjct: 278 tcattggtggtggggacggcggcgtactgcgggaggt 314
>gb|AY335900.1| Lycopersicon esculentum putative spermine synthase (SPM1) mRNA, complete cds Length = 1162 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 399 gcctaccaggagatgattacccaccttcctctctgctcaatcaaggatccaaagaaggtc 458 ||||| ||||||||||| |||| |||||||| || |||||||| ||| |||||||| Sbjct: 371 gcctatcaggagatgatagcccatcttcctctttgttcaatcaaatctcctaagaaggtt 430 Query: 459 ctggt 463 ||||| Sbjct: 431 ctggt 435
>emb|AL109811.40|HSJ635E18 Human DNA sequence from clone RP4-635E18 on chromosome 1p36.11-36.31 Contains the TARDBP gene for TAR DNA binding protein, the MASP2 gene for mannan-binding lectin serine protease 2, the SRM gene for spermidine synthase, the PMSCL2 gene for 100kDa polymyositis/scleroderma autoantigen 2 (FLJ41371, FLJ36636, two novel genes (FLJ30609), the 3' end of the FRAP1 gene for FK506 binding protein 12-rapamycin associated protein 1 and a CpG island, complete sequence Length = 112769 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 390 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 434 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 55638 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 55594
>gb|AC091666.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0078C13, complete sequence Length = 140553 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 33009 gccgagctgacctcgtcgtcgtcgt 32985
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence Length = 164943 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 agctcacctcgtcgtcgtcgt 103 ||||||||||||||||||||| Sbjct: 107117 agctcacctcgtcgtcgtcgt 107097
>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0078C13, complete sequence Length = 146538 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 17705 gccgagctgacctcgtcgtcgtcgt 17729
>emb|CR605847.1| full-length cDNA clone CS0DJ014YF19 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1229 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 390 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 434 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 287 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 331
>emb|CR604523.1| full-length cDNA clone CS0DC025YK10 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1118 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 390 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 434 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 192 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 236
>emb|CR603559.1| full-length cDNA clone CS0DL010YG18 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1226 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 390 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 434 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 282 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 326
>emb|CR590206.1| full-length cDNA clone CS0DL006YJ07 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1245 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 390 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 434 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 314 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 358
>gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 genomic sequence, complete sequence Length = 143961 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 gatggcgctgcggcggcggcg 179 ||||||||||||||||||||| Sbjct: 67485 gatggcgctgcggcggcggcg 67505
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 agctcacctcgtcgtcgtcgt 103 ||||||||||||||||||||| Sbjct: 34489632 agctcacctcgtcgtcgtcgt 34489612
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 14686839 gccgagctgacctcgtcgtcgtcgt 14686863 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gctgcggcggcggcggacgg 184 |||||||||||||||||||| Sbjct: 22824741 gctgcggcggcggcggacgg 22824722
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 gatggcgctgcggcggcggcg 179 ||||||||||||||||||||| Sbjct: 22415462 gatggcgctgcggcggcggcg 22415482 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 10000946 gccgagctgacctcgtcgtcgtcgt 10000970 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 acctcgtcgtcgtcgtgctc 107 |||||||||||||||||||| Sbjct: 15572358 acctcgtcgtcgtcgtgctc 15572377
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 cacctcgtcgtcgtcgtgctc 107 ||||||||||||||||||||| Sbjct: 18601313 cacctcgtcgtcgtcgtgctc 18601333
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 gtggcggagacggcggcgttc 489 ||||||||||||||||||||| Sbjct: 6407741 gtggcggagacggcggcgttc 6407721 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 cctcgtcgtcgtcgtgctct 108 |||||||||||||||||||| Sbjct: 1172898 cctcgtcgtcgtcgtgctct 1172917
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 22564406 gccgagctgacctcgtcgtcgtcgt 22564430 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 153 gagagcgatggcgctgcggcggcggcgg 180 ||||||| ||||| |||||||||||||| Sbjct: 8716085 gagagcggtggcggtgcggcggcggcgg 8716058
>emb|BX816927.1|CNS0ABX3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH77ZD02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1275 Score = 42.1 bits (21), Expect = 1.8 Identities = 90/113 (79%) Strand = Plus / Plus Query: 222 gggtggttctccgagatcagccccatgtggcccggcgaggcacactcgctgaaggtggag 281 ||||||||||| || || || || |||||||| || ||||||||||| ||||||| || Sbjct: 195 gggtggttctctgaaatgagtcctatgtggccaggagaggcacactcattgaaggttgaa 254 Query: 282 aaggtcctgttccaaggcaagtcagactaccaagatgtgctggttttccagtc 334 || || |||| ||||| || ||||| || || ||||| | ||||||||||| Sbjct: 255 aaagttttgtttcaagggaaatcagattatcaggatgttattgttttccagtc 307
>dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1097D05 Length = 144879 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 80143 gccgagctgacctcgtcgtcgtcgt 80167
>dbj|AP005545.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0638H11 Length = 162746 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 gtggcggagacggcggcgttc 489 ||||||||||||||||||||| Sbjct: 74685 gtggcggagacggcggcgttc 74665
>dbj|AP004561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0465H09 Length = 148590 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 66264 gccgagctgacctcgtcgtcgtcgt 66240
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 122546 gccgagctgacctcgtcgtcgtcgt 122522
>dbj|AP005694.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0063E14 Length = 174415 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 61292 gccgagctgacctcgtcgtcgtcgt 61268
>dbj|AP005485.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1136_D12 Length = 105521 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 2940 gccgagctgacctcgtcgtcgtcgt 2916
>dbj|AP004647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1267_E11 Length = 117073 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 36362 gccgagctgacctcgtcgtcgtcgt 36386
>dbj|AP005523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0488B06 Length = 154764 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 77526 gccgagctgacctcgtcgtcgtcgt 77550
>dbj|AK108462.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-D09, full insert sequence Length = 755 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cctaccaggagatgattacccacct 424 |||||||||||||||| |||||||| Sbjct: 26 cctaccaggagatgatcacccacct 50
>dbj|AK105294.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-G10, full insert sequence Length = 1721 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 cacctcgtcgtcgtcgtgctc 107 ||||||||||||||||||||| Sbjct: 614 cacctcgtcgtcgtcgtgctc 634
>dbj|AK070214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045L17, full insert sequence Length = 854 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 gtggcggagacggcggcgttc 489 ||||||||||||||||||||| Sbjct: 299 gtggcggagacggcggcgttc 319
>gb|AF043109.1|AF043109 Pisum sativum spermidine synthase 2 (SPDSYN2) mRNA, complete cds Length = 1279 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 388 gggacgagtgcgcctaccaggagatgattacccaccttcctctctgctc 436 ||||||| || |||||||| || ||||| || || |||||||||||||| Sbjct: 370 gggacgaatgtgcctaccaagaaatgatcactcatcttcctctctgctc 418
>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete sequence Length = 138387 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 agctcacctcgtcgtcgtcgt 103 ||||||||||||||||||||| Sbjct: 111159 agctcacctcgtcgtcgtcgt 111139
>emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0103C06, complete sequence Length = 104146 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 agctcacctcgtcgtcgtcgt 103 ||||||||||||||||||||| Sbjct: 21492 agctcacctcgtcgtcgtcgt 21472
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 gatggcgctgcggcggcggcg 179 ||||||||||||||||||||| Sbjct: 22427530 gatggcgctgcggcggcggcg 22427550 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 10006985 gccgagctgacctcgtcgtcgtcgt 10007009 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 acctcgtcgtcgtcgtgctc 107 |||||||||||||||||||| Sbjct: 15580599 acctcgtcgtcgtcgtgctc 15580618
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 14641122 gccgagctgacctcgtcgtcgtcgt 14641146 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gctgcggcggcggcggacgg 184 |||||||||||||||||||| Sbjct: 22752932 gctgcggcggcggcggacgg 22752913
>emb|AL954159.4|CNS08CCX Oryza sativa chromosome 12, . BAC OSJNBa0057C04 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131673 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 57246 gccgagctgacctcgtcgtcgtcgt 57222
>emb|AL928751.2|CNS08CBO Oryza sativa chromosome 12, . BAC OSJNBa0037B01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133207 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 gccgagctcacctcgtcgtcgtcgt 103 |||||||| |||||||||||||||| Sbjct: 131960 gccgagctgacctcgtcgtcgtcgt 131936
>emb|CT027657.3| Macaca mulatta chromosome 9 BAC CH250-255J18, complete sequence Length = 172942 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 ctccccactctccacccagcc 53 ||||||||||||||||||||| Sbjct: 137272 ctccccactctccacccagcc 137292
>gb|M64231.1|HUMSPERSYN Human spermidine synthase gene, complete cds Length = 7623 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 390 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 434 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 2050 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 2094
>gb|M34338.1|HUMSPERSYO Human spermidine synthase mRNA, complete cds Length = 1238 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 390 gacgagtgcgcctaccaggagatgattacccaccttcctctctgc 434 ||||||| | |||||||||||||||| || |||| ||||||||| Sbjct: 305 gacgagttctcctaccaggagatgatcgccaacctgcctctctgc 349
>gb|AC153694.1| Mus musculus BAC RP23-333I12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208414 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ccctccccactctccaccca 50 |||||||||||||||||||| Sbjct: 129049 ccctccccactctccaccca 129030
>ref|NM_187942.1| Oryza sativa (japonica cultivar-group), Ozsa8362 predicted mRNA Length = 1782 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 153 gagagcgatggcgctgcggcggcggcgg 180 ||||||| ||||| |||||||||||||| Sbjct: 394 gagagcggtggcggtgcggcggcggcgg 421
>ref|XM_475577.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1509 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cacccagccgccgccgacga 64 |||||||||||||||||||| Sbjct: 1128 cacccagccgccgccgacga 1147
>ref|XM_479552.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1581 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gctgcggcggcggcggacgg 184 |||||||||||||||||||| Sbjct: 1076 gctgcggcggcggcggacgg 1095
>ref|XM_476597.1| Oryza sativa (japonica cultivar-group), mRNA Length = 231 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcgtcgtcgtcgtgctctag 110 |||||||||||||||||||| Sbjct: 189 tcgtcgtcgtcgtgctctag 208
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ctctgctcaatcaaggatcc 448 |||||||||||||||||||| Sbjct: 1215535 ctctgctcaatcaaggatcc 1215516
>gb|AY023197.1| Oryza sativa microsatellite MRG5522 containing (GCG)X9, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 153 gagagcgatggcgctgcggcggcggcgg 180 ||||||| ||||| |||||||||||||| Sbjct: 86 gagagcggtggcggtgcggcggcggcgg 113
>gb|AC150516.2| Bos taurus BAC CH240-117L9 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 237116 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 tccagtcctccacctgcggg 347 |||||||||||||||||||| Sbjct: 146578 tccagtcctccacctgcggg 146597
>ref|XM_417130.1| PREDICTED: Gallus gallus similar to Potential phospholipid-transporting ATPase IB (ATPase class I type 8A member 2) (ML-1) (LOC418936), mRNA Length = 8442 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gctgcggcggcggcggacgg 184 |||||||||||||||||||| Sbjct: 440 gctgcggcggcggcggacgg 421
>ref|XM_878626.1| PREDICTED: Bos taurus similar to spermidine synthase, transcript variant 3 (LOC505916), mRNA Length = 1354 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 388 gggacgagtgcgcctaccaggagatgat 415 ||||||||| | |||||||||||||||| Sbjct: 311 gggacgagttctcctaccaggagatgat 338
>ref|XM_582280.2| PREDICTED: Bos taurus similar to spermidine synthase, transcript variant 1 (LOC505916), mRNA Length = 1263 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 388 gggacgagtgcgcctaccaggagatgat 415 ||||||||| | |||||||||||||||| Sbjct: 311 gggacgagttctcctaccaggagatgat 338
>ref|XM_583252.2| PREDICTED: Bos taurus similar to carbohydrate (chondroitin 6) sulfotransferase 3 (LOC506758), mRNA Length = 1440 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tccagtcctccacctgcggg 347 |||||||||||||||||||| Sbjct: 1207 tccagtcctccacctgcggg 1188
>gb|BC055055.1| Mus musculus carbohydrate (chondroitin 6/keratan) sulfotransferase 3, mRNA (cDNA clone MGC:62836 IMAGE:6493234), complete cds Length = 6000 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tccagtcctccacctgcggg 347 |||||||||||||||||||| Sbjct: 1675 tccagtcctccacctgcggg 1656
>gb|AC146029.4| Pan troglodytes BAC clone RP43-124D5 from 7, complete sequence Length = 190776 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 ctccccactctccacccagccgcc 56 ||||||||||||||||| |||||| Sbjct: 158213 ctccccactctccaccccgccgcc 158190
>gb|AC162380.4| Pan troglodytes BAC clone CH251-629G18 from chromosome 7, complete sequence Length = 210978 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 ctccccactctccacccagccgcc 56 ||||||||||||||||| |||||| Sbjct: 113107 ctccccactctccaccccgccgcc 113130
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 atgtgctggttttccagtcc 335 |||||||||||||||||||| Sbjct: 2953141 atgtgctggttttccagtcc 2953160
>gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete sequence Length = 130146 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggcgctgcggcggcggcgga 181 |||||||||||||||||||| Sbjct: 27319 ggcgctgcggcggcggcgga 27338
>gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019B24, complete sequence Length = 162385 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gctgcggcggcggcggacgg 184 |||||||||||||||||||| Sbjct: 156440 gctgcggcggcggcggacgg 156421
>gb|AC148137.3| Callicebus moloch clone LB5-202I8, complete sequence Length = 150353 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ctctgctcaatcaaggatcc 448 |||||||||||||||||||| Sbjct: 136918 ctctgctcaatcaaggatcc 136899
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 gcgatggcgctgcggcggcggcgg 180 |||||||||| ||||||||||||| Sbjct: 144017 gcgatggcgcggcggcggcggcgg 144040
>ref|XM_747626.1| Aspergillus fumigatus Af293 spermidine synthase (Afu1g13490) partial mRNA Length = 882 Score = 40.1 bits (20), Expect = 7.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 381 accgagcgggacgagtgcgcctaccaggagatgattacccacct 424 ||||||||||| |||| | | |||||||||||||| || ||||| Sbjct: 193 accgagcgggatgagttctcgtaccaggagatgatcactcacct 236
>emb|CR732816.1| Gallus gallus finished cDNA, clone ChEST742i24 Length = 1113 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ggtggagaaggtcctgttcc 294 |||||||||||||||||||| Sbjct: 107 ggtggagaaggtcctgttcc 126
>ref|XM_862775.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 6 (LOC612954), mRNA Length = 1720 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gcgctgcggcggcggcggac 182 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_862768.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 5 (LOC612954), mRNA Length = 1786 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gcgctgcggcggcggcggac 182 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_862760.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 4 (LOC612954), mRNA Length = 1786 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gcgctgcggcggcggcggac 182 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_862752.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 3 (LOC612954), mRNA Length = 1846 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gcgctgcggcggcggcggac 182 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_862747.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 2 (LOC612954), mRNA Length = 1801 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gcgctgcggcggcggcggac 182 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_848628.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 1 (LOC612954), mRNA Length = 1806 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gcgctgcggcggcggcggac 182 |||||||||||||||||||| Sbjct: 63 gcgctgcggcggcggcggac 44
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 cagccccatgtggcccggcg 258 |||||||||||||||||||| Sbjct: 2971054 cagccccatgtggcccggcg 2971035
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 agacggcggcgaagagggcg 149 |||||||||||||||||||| Sbjct: 101208 agacggcggcgaagagggcg 101227
>gb|DQ397600.1| Cenarchaeum symbiosum clone C07B08, complete sequence Length = 41295 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 agcaggcggggatctccgcc 212 |||||||||||||||||||| Sbjct: 7105 agcaggcggggatctccgcc 7086
>gb|DQ397575.1| Cenarchaeum symbiosum clone C11D05, complete sequence Length = 41867 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 agcaggcggggatctccgcc 212 |||||||||||||||||||| Sbjct: 24565 agcaggcggggatctccgcc 24546
>ref|NM_053408.1| Rattus norvegicus carbohydrate (chondroitin 6/keratan) sulfotransferase 3 (Chst3), mRNA Length = 1425 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tccagtcctccacctgcggg 347 |||||||||||||||||||| Sbjct: 1186 tccagtcctccacctgcggg 1167
>tpg|BK005008.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 5 (WRKY5) gene, complete cds Length = 5379 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cacccagccgccgccgacga 64 |||||||||||||||||||| Sbjct: 4998 cacccagccgccgccgacga 5017
>gb|AC171242.2| Gallus gallus BAC clone CH261-59O7 from chromosome ul, complete sequence Length = 191648 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gctgcggcggcggcggacgg 184 |||||||||||||||||||| Sbjct: 145649 gctgcggcggcggcggacgg 145668
>gb|AF178689.2| Rattus norvegicus chondroitin 6-sulfotransferase mRNA, complete cds Length = 1425 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tccagtcctccacctgcggg 347 |||||||||||||||||||| Sbjct: 1186 tccagtcctccacctgcggg 1167
>emb|BX323865.6| Zebrafish DNA sequence from clone CH211-134N22 in linkage group 14, complete sequence Length = 75932 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gcatccctccccactctcca 46 |||||||||||||||||||| Sbjct: 53694 gcatccctccccactctcca 53675
>gb|AC161278.2| Pan troglodytes BAC clone CH251-486B7 from chromosome 7, complete sequence Length = 211383 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 ctccccactctccacccagccgcc 56 ||||||||||||||||| |||||| Sbjct: 51774 ctccccactctccaccccgccgcc 51751
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 cgccgtcatccccgggtggt 228 |||||||||||||||||||| Sbjct: 58197 cgccgtcatccccgggtggt 58216
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 cgccgtcatccccgggtggt 228 |||||||||||||||||||| Sbjct: 120356 cgccgtcatccccgggtggt 120375
>gb|AC146885.3| Callithrix jacchus clone CH259-349L5, complete sequence Length = 213940 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ctctgctcaatcaaggatcc 448 |||||||||||||||||||| Sbjct: 60627 ctctgctcaatcaaggatcc 60608
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 cgctgcggcggcggcggacg 183 |||||||||||||||||||| Sbjct: 2153677 cgctgcggcggcggcggacg 2153658
>emb|AL114430.1|CNS01BMU Botrytis cinerea strain T4 cDNA library Length = 660 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 447 ccaaagaaggtcctggtcataggtggcggaga 478 |||||||||||| ||||||| ||||| ||||| Sbjct: 329 ccaaagaaggtcttggtcattggtggaggaga 360
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gctgcggcggcggcggacgg 184 |||||||||||||||||||| Sbjct: 1641904 gctgcggcggcggcggacgg 1641885
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cacccagccgccgccgacga 64 |||||||||||||||||||| Sbjct: 2119503 cacccagccgccgccgacga 2119484
>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20, complete sequence Length = 193119 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 acctcgtcgtcgtcgtgctc 107 |||||||||||||||||||| Sbjct: 59724 acctcgtcgtcgtcgtgctc 59743
>gb|AC155640.5| Mus musculus 10 BAC RP24-87H21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 222712 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tccagtcctccacctgcggg 347 |||||||||||||||||||| Sbjct: 79075 tccagtcctccacctgcggg 79056
>dbj|AB062109.3| Mus musculus C6st gene for chondroitin 6-sulfotransferase, complete cds Length = 8003 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tccagtcctccacctgcggg 347 |||||||||||||||||||| Sbjct: 6871 tccagtcctccacctgcggg 6852
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ggccgagacggcggcgaaga 144 |||||||||||||||||||| Sbjct: 2993916 ggccgagacggcggcgaaga 2993897
>gb|AC009277.4|AC009277 Homo sapiens chromosome 18, clone RP11-481E24, complete sequence Length = 160401 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 gagaaggtcctgttccaagg 298 |||||||||||||||||||| Sbjct: 31123 gagaaggtcctgttccaagg 31104
>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0699D11 Length = 140825 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 153 gagagcgatggcgctgcggcggcggcgg 180 ||||||| ||||| |||||||||||||| Sbjct: 33542 gagagcggtggcggtgcggcggcggcgg 33515
>gb|AC171011.2| Gallus gallus BAC clone CH261-112C5 from chromosome ul, complete sequence Length = 230767 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gctgcggcggcggcggacgg 184 |||||||||||||||||||| Sbjct: 98414 gctgcggcggcggcggacgg 98433
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008J01 Length = 159900 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gctgcggcggcggcggacgg 184 |||||||||||||||||||| Sbjct: 89864 gctgcggcggcggcggacgg 89883
>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0542E10 Length = 146196 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 cctcgtcgtcgtcgtgctct 108 |||||||||||||||||||| Sbjct: 24851 cctcgtcgtcgtcgtgctct 24870
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0495H05 Length = 205595 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcgtcgtcgtcgtgctctag 110 |||||||||||||||||||| Sbjct: 187806 tcgtcgtcgtcgtgctctag 187825
>emb|AL691421.9| Mouse DNA sequence from clone RP23-21A16 on chromosome X, complete sequence Length = 221461 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 aggttttggggatggaggccgaga 132 ||||||||||||||||||| |||| Sbjct: 34505 aggttttggggatggaggcagaga 34482
>dbj|AK120411.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B13, full insert sequence Length = 1422 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 cgccgtcatccccgggtggt 228 |||||||||||||||||||| Sbjct: 1001 cgccgtcatccccgggtggt 1020
>emb|AJ238245.1|TTA238245 Triticum tauschii st2 gene, exons 1-13 Length = 5329 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 gcggcggcggcggacggagccgttgagc 195 ||||||||||||||||||| || ||||| Sbjct: 4885 gcggcggcggcggacggagacggtgagc 4858
>gb|AC002126.1|AC002126 Homo sapiens DNA from chromosome 19-cosmids R30102:R29350:R27740 containing MEF2B, genomic sequence, complete sequence Length = 89818 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ccctccccactctccaccca 50 |||||||||||||||||||| Sbjct: 41551 ccctccccactctccaccca 41532
>dbj|AK110457.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-F05, full insert sequence Length = 3027 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gcgctgcggcggcggcggac 182 |||||||||||||||||||| Sbjct: 1680 gcgctgcggcggcggcggac 1661
>dbj|AK109712.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-H03, full insert sequence Length = 2670 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 cctcgtcgtcgtcgtgctct 108 |||||||||||||||||||| Sbjct: 1317 cctcgtcgtcgtcgtgctct 1336
>dbj|AK099751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B12, full insert sequence Length = 1422 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 cgccgtcatccccgggtggt 228 |||||||||||||||||||| Sbjct: 1001 cgccgtcatccccgggtggt 1020
>dbj|AK067013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093E22, full insert sequence Length = 1192 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 acctcgtcgtcgtcgtgctc 107 |||||||||||||||||||| Sbjct: 167 acctcgtcgtcgtcgtgctc 148
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcgtcgtcgtcgtgctctag 110 |||||||||||||||||||| Sbjct: 59302 tcgtcgtcgtcgtgctctag 59321
>gb|AY106782.1| Zea mays PCO117134 mRNA sequence Length = 862 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 tgcggcggcggcggacggag 186 |||||||||||||||||||| Sbjct: 304 tgcggcggcggcggacggag 285
>gb|AY104690.1| Zea mays PCO097022 mRNA sequence Length = 836 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 ccactctccacccagccgccgccg 60 |||| ||||||||||||||||||| Sbjct: 59 ccaccctccacccagccgccgccg 82
>tpe|BN000574.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx45 gene for class III peroxidase 45 precursor, exons 1-2 Length = 1091 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 cgccgtcatccccgggtggt 228 |||||||||||||||||||| Sbjct: 968 cgccgtcatccccgggtggt 987
>gb|AC004395.1|AC004395 Emericella nidulans Chromosome VIII Cosmid Clone 30b1, complete sequence Length = 37312 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 ctaccaggagatgattacccacct 424 ||||||||| |||||||||||||| Sbjct: 6892 ctaccaggaaatgattacccacct 6915
>gb|AC005299.1|AC005299 emericella nidulans chromosome viii cosmid 2h2 containing spermidine synthase, complete sequence Length = 40554 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 ctaccaggagatgattacccacct 424 ||||||||| |||||||||||||| Sbjct: 25978 ctaccaggaaatgattacccacct 25955
>dbj|AB008937.1| Mus musculus C6st mRNA for chondroitin 6-sulfotransferase, complete cds Length = 1654 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tccagtcctccacctgcggg 347 |||||||||||||||||||| Sbjct: 1415 tccagtcctccacctgcggg 1396
>gb|AC165951.3| Mus musculus BAC clone RP24-137B13 from chromosome 17, complete sequence Length = 209191 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ggctggcatccctccccact 41 |||||||||||||||||||| Sbjct: 184668 ggctggcatccctccccact 184649
>gb|AC174770.1| Gasterosteus aculeatus clone VMRC28-84C03, complete sequence Length = 124367 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 gcggcggcggcggacggagccgtt 191 |||||||||||| ||||||||||| Sbjct: 691 gcggcggcggcgtacggagccgtt 714
>ref|NM_016803.2| Mus musculus carbohydrate (chondroitin 6/keratan) sulfotransferase 3 (Chst3), mRNA Length = 6000 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tccagtcctccacctgcggg 347 |||||||||||||||||||| Sbjct: 1675 tccagtcctccacctgcggg 1656
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gctgcggcggcggcggacgg 184 |||||||||||||||||||| Sbjct: 1639625 gctgcggcggcggcggacgg 1639606
>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148705 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gctgcggcggcggcggacgg 184 |||||||||||||||||||| Sbjct: 132103 gctgcggcggcggcggacgg 132122
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ctctgctcaatcaaggatcc 448 |||||||||||||||||||| Sbjct: 1202855 ctctgctcaatcaaggatcc 1202836
>gb|AC166166.2| Mus musculus BAC clone RP23-293B18 from chromosome 17, complete sequence Length = 177378 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ggctggcatccctccccact 41 |||||||||||||||||||| Sbjct: 28919 ggctggcatccctccccact 28900
>gb|AC093490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1127_B08, complete sequence Length = 112268 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cacccagccgccgccgacga 64 |||||||||||||||||||| Sbjct: 86344 cacccagccgccgccgacga 86325
>gb|AY050641.1| Aspergillus nidulans spermidine synthase gene, complete cds Length = 2249 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 ctaccaggagatgattacccacct 424 ||||||||| |||||||||||||| Sbjct: 778 ctaccaggaaatgattacccacct 801
>dbj|AB008938.1| Mus musculus mRNA for chondroitin 6-sulfotransferase, partial cds Length = 1283 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tccagtcctccacctgcggg 347 |||||||||||||||||||| Sbjct: 536 tccagtcctccacctgcggg 517 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,713,382 Number of Sequences: 3902068 Number of extensions: 4713382 Number of successful extensions: 145844 Number of sequences better than 10.0: 199 Number of HSP's better than 10.0 without gapping: 215 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 138938 Number of HSP's gapped (non-prelim): 6896 length of query: 537 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 514 effective length of database: 17,143,297,704 effective search space: 8811655019856 effective search space used: 8811655019856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)