ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart55b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC136377.4| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
4gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725... 62 2e-06
5gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 46 0.13
6gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 46 0.13
7gb|AC144717.1| Zea mays cultivar B73 chromosome 4S sequenced fra... 46 0.13
8emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 46 0.13
9gb|AF090446.1| Zea mays cosmid IV.1E1 22-kDa alpha zein protein ... 46 0.13
10gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 46 0.13
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.52
12gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.52
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
14gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 44 0.52
15gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 42 2.1
16gb|AC160638.6| Mus musculus BAC clone RP23-99K6 from chromosome ... 42 2.1
17gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 2.1
18dbj|AP008980.1| Terrabacter sp. DBF63 plasmid pDBF1 genes, compl... 42 2.1
19gb|CP000249.1| Frankia sp. CcI3, complete genome 42 2.1
20gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 42 2.1
21dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome 42 2.1
22gb|AE004959.1| Pseudomonas aeruginosa PAO1, section 520 of 529 o... 42 2.1
23dbj|AB095015.1| Terrabacter sp. DBF63 DNA, angular dioxygenase r... 42 2.1
24gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 2.1
25ref|XM_474290.1| Oryza sativa (japonica cultivar-group), predic... 40 8.1
26gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 8.1
27ref|NM_030261.2| Mus musculus sestrin 3 (Sesn3), mRNA 40 8.1
28gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 8.1
29gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 8.1
30emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.1
31dbj|AK155398.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 8.1
32gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 8.1
33gb|AC154264.2| Mus musculus BAC clone RP24-316B2 from chromosome... 40 8.1
34dbj|AK017464.1| Mus musculus 6 days embryo whole body cDNA, RIKE... 40 8.1
35dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
36dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.1
37ref|XM_235825.3| PREDICTED: Rattus norvegicus sestrin 3 (predict... 40 8.1
38gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 8.1
39gb|AY156931.1| Tupaia belangeri alpha-2A adrenoceptor mRNA, comp... 40 8.1
40dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 8.1
41dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
42dbj|AK109042.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
43gb|AY104298.1| Zea mays PCO095355 mRNA sequence 40 8.1
44gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome 40 8.1
45emb|CT485606.7| Mouse DNA sequence from clone RP24-246F10 on chr... 40 8.1 
>gb|AC136377.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0028G07, complete sequence
          Length = 157463

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                              
Query: 79    ttcttcggctacgacccctacgactactactac 111
             |||||||||||||||||||||||||||||||||
Sbjct: 67480 ttcttcggctacgacccctacgactactactac 67448



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                         
Query: 399   ggaggaggccgccgtgagggtgcaggcggcggcccgcgggcacatggccaggaggatggt 458
             ||||| ||| || ||||||||||||||||||||  | |||  | |||| |||||||||||
Sbjct: 67151 ggaggcggcggcggtgagggtgcaggcggcggcgagggggttcctggcgaggaggatggt 67092

                       
Query: 459   gcgtgaggtg 468
             ||| ||||||
Sbjct: 67091 gcgggaggtg 67082
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                                 
Query: 79       ttcttcggctacgacccctacgactactactac 111
                |||||||||||||||||||||||||||||||||
Sbjct: 17473466 ttcttcggctacgacccctacgactactactac 17473434



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                            
Query: 399      ggaggaggccgccgtgagggtgcaggcggcggcccgcgggcacatggccaggaggatggt 458
                ||||| ||| || ||||||||||||||||||||  | |||  | |||| |||||||||||
Sbjct: 17473137 ggaggcggcggcggtgagggtgcaggcggcggcgagggggttcctggcgaggaggatggt 17473078

                          
Query: 459      gcgtgaggtg 468
                ||| ||||||
Sbjct: 17473077 gcgggaggtg 17473068
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                                 
Query: 79       ttcttcggctacgacccctacgactactactac 111
                |||||||||||||||||||||||||||||||||
Sbjct: 17567176 ttcttcggctacgacccctacgactactactac 17567144



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                            
Query: 399      ggaggaggccgccgtgagggtgcaggcggcggcccgcgggcacatggccaggaggatggt 458
                ||||| ||| || ||||||||||||||||||||  | |||  | |||| |||||||||||
Sbjct: 17566847 ggaggcggcggcggtgagggtgcaggcggcggcgagggggttcctggcgaggaggatggt 17566788

                          
Query: 459      gcgtgaggtg 468
                ||| ||||||
Sbjct: 17566787 gcgggaggtg 17566778
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>gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725 orthologous region
          Length = 108553

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                     
Query: 393    gtcggcggaggaggccgccgtgagggtgcaggcggcggc 431
              |||||||||||||||||| |||||| |||||||||||||
Sbjct: 103694 gtcggcggaggaggccgcggtgaggatgcaggcggcggc 103732



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                    
Query: 393   gtcggcggaggaggccgccgtgagggtgcaggcggcggc 431
             |||||||||||||||||| |||||| |||||||||||||
Sbjct: 84126 gtcggcggaggaggccgcggtgaggatgcaggcggcggc 84088
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 516     cgaggccgacgcgctgcgcgcgg 538
               |||||||||||||||||||||||
Sbjct: 3241675 cgaggccgacgcgctgcgcgcgg 3241697



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 514     gccgaggccgacgcgctgcgcgcg 537
               ||||||| ||||||||||||||||
Sbjct: 2245272 gccgaggacgacgcgctgcgcgcg 2245295
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 516    cgaggccgacgcgctgcgcgcgg 538
              |||||||||||||||||||||||
Sbjct: 700011 cgaggccgacgcgctgcgcgcgg 700033



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 514     gccgaggccgacgcgctgcgcgcg 537
               ||||||| ||||||||||||||||
Sbjct: 3418767 gccgaggacgacgcgctgcgcgcg 3418790
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>gb|AC144717.1| Zea mays cultivar B73 chromosome 4S sequenced fragment from BAC
             ZMMBBb282F18, which containing the 22 kDa gene copy of
             azs22.16 (floury2), complete sequence
          Length = 14273

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 89    acgacccctacgactactactac 111
             |||||||||||||||||||||||
Sbjct: 12262 acgacccctacgactactactac 12240
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 516    cgaggccgacgcgctgcgcgcgg 538
              |||||||||||||||||||||||
Sbjct: 508638 cgaggccgacgcgctgcgcgcgg 508660



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 514     gccgaggccgacgcgctgcgcgcg 537
               ||||||| ||||||||||||||||
Sbjct: 3159848 gccgaggacgacgcgctgcgcgcg 3159871
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>gb|AF090446.1| Zea mays cosmid IV.1E1 22-kDa alpha zein protein 21 (azs22-16) gene,
            complete cds; retrotransposon Opie-2 gag protein,
            polyprotein, and copia protein genes, complete cds; and
            unknown genes
          Length = 30593

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 89   acgacccctacgactactactac 111
            |||||||||||||||||||||||
Sbjct: 7199 acgacccctacgactactactac 7221
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 516    cgaggccgacgcgctgcgcgcgg 538
              |||||||||||||||||||||||
Sbjct: 487826 cgaggccgacgcgctgcgcgcgg 487848



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 514     gccgaggccgacgcgctgcgcgcg 537
               ||||||| ||||||||||||||||
Sbjct: 1723136 gccgaggacgacgcgctgcgcgcg 1723113
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 513      ggccgaggccgacgcgctgcgcgcgg 538
                ||||||||||||||||| ||||||||
Sbjct: 11673673 ggccgaggccgacgcgcggcgcgcgg 11673648
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>gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0093J20, from chromosome 3, complete sequence
          Length = 148635

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 513   ggccgaggccgacgcgctgcgcgcgg 538
             ||||||||||||||||| ||||||||
Sbjct: 62768 ggccgaggccgacgcgcggcgcgcgg 62743
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 513      ggccgaggccgacgcgctgcgcgcgg 538
                ||||||||||||||||| ||||||||
Sbjct: 11670436 ggccgaggccgacgcgcggcgcgcgg 11670411
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 510    ggcggccgaggccgacgcgctgcgcg 535
              |||||||||| |||||||||||||||
Sbjct: 418923 ggcggccgagcccgacgcgctgcgcg 418898



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 89      acgacccctacgactactac 108
               ||||||||||||||||||||
Sbjct: 2048577 acgacccctacgactactac 2048558



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 513     ggccgaggccgacgcgctgc 532
               ||||||||||||||||||||
Sbjct: 1122914 ggccgaggccgacgcgctgc 1122895



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 517    gaggccgacgcgctgcgcgc 536
              ||||||||||||||||||||
Sbjct: 416976 gaggccgacgcgctgcgcgc 416957
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 175   gacggcgagcgcctgtatcgacacg 199
             ||||||| |||||||||||||||||
Sbjct: 70673 gacggcgcgcgcctgtatcgacacg 70697
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>gb|AC160638.6| Mus musculus BAC clone RP23-99K6 from chromosome 15, complete sequence
          Length = 218870

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 232   gcctcctacttccctggcgtc 252
             |||||||||||||||||||||
Sbjct: 44628 gcctcctacttccctggcgtc 44608
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 389     cgccgtcggcggaggaggccg 409
               |||||||||||||||||||||
Sbjct: 4791456 cgccgtcggcggaggaggccg 4791436



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 456    ggtgcgtgaggtgcgcaagg 475
              ||||||||||||||||||||
Sbjct: 453974 ggtgcgtgaggtgcgcaagg 453955
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>dbj|AP008980.1| Terrabacter sp. DBF63 plasmid pDBF1 genes, complete and partial cds
          Length = 70631

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 331   atcgaggtcaccggccccgac 351
             |||||||||||||||||||||
Sbjct: 52744 atcgaggtcaccggccccgac 52764
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 509     tggcggccgaggccgacgcgctgcgcgcg 537
               ||||||||||| ||||||||||| |||||
Sbjct: 2052780 tggcggccgagaccgacgcgctgggcgcg 2052752
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 497     tggccgcgaggatggcggccg 517
               |||||||||||||||||||||
Sbjct: 2868055 tggccgcgaggatggcggccg 2868075



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 516     cgaggccgacgcgctgcgcg 535
               ||||||||||||||||||||
Sbjct: 2210694 cgaggccgacgcgctgcgcg 2210675
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>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 84     cggctacgacccctacgactactac 108
              |||||||||| ||||||||||||||
Sbjct: 852882 cggctacgacacctacgactactac 852906
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>gb|AE004959.1| Pseudomonas aeruginosa PAO1, section 520 of 529 of the complete
            genome
          Length = 10871

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 519  ggccgacgcgctgcgcgcgga 539
            |||||||||||||||||||||
Sbjct: 7846 ggccgacgcgctgcgcgcgga 7826
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>dbj|AB095015.1| Terrabacter sp. DBF63 DNA, angular dioxygenase region
          Length = 11859

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 331  atcgaggtcaccggccccgac 351
            |||||||||||||||||||||
Sbjct: 7478 atcgaggtcaccggccccgac 7498
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 380     agaagccggcgccgtcggcgg 400
               |||||||||||||||||||||
Sbjct: 3284158 agaagccggcgccgtcggcgg 3284138



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 487     gcggacgccgtggccgcgag 506
               ||||||||||||||||||||
Sbjct: 1114291 gcggacgccgtggccgcgag 1114272
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>ref|XM_474290.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1341

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 381 gaagccggcgccgtcggcggagga 404
           |||||||||||||||| |||||||
Sbjct: 165 gaagccggcgccgtcgccggagga 188
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 515     ccgaggccgacgcgctgcgc 534
               ||||||||||||||||||||
Sbjct: 2962707 ccgaggccgacgcgctgcgc 2962726
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>ref|NM_030261.2| Mus musculus sestrin 3 (Sesn3), mRNA
          Length = 2055

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 513 ggccgaggccgacgcgctgc 532
           ||||||||||||||||||||
Sbjct: 184 ggccgaggccgacgcgctgc 165
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 141     cgcctacccctccgccgccgacgcctac 168
               ||||||||||||| |||||||| |||||
Sbjct: 4454040 cgcctacccctcctccgccgacacctac 4454067
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 485    aggcggacgccgtggccgcg 504
              ||||||||||||||||||||
Sbjct: 151294 aggcggacgccgtggccgcg 151313
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 515     ccgaggccgacgcgctgcgc 534
               ||||||||||||||||||||
Sbjct: 1141264 ccgaggccgacgcgctgcgc 1141283
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>dbj|AK155398.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630224D16
           product:sestrin 3, full insert sequence
          Length = 2159

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 513 ggccgaggccgacgcgctgc 532
           ||||||||||||||||||||
Sbjct: 288 ggccgaggccgacgcgctgc 269
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 513     ggccgaggccgacgcgctgc 532
               ||||||||||||||||||||
Sbjct: 3122811 ggccgaggccgacgcgctgc 3122830
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>gb|AC154264.2| Mus musculus BAC clone RP24-316B2 from chromosome 9, complete
            sequence
          Length = 166515

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 513  ggccgaggccgacgcgctgc 532
            ||||||||||||||||||||
Sbjct: 5309 ggccgaggccgacgcgctgc 5328
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>dbj|AK017464.1| Mus musculus 6 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5630400E15 product:SESTRIN 3
           homolog [Homo sapiens], full insert sequence
          Length = 2055

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 513 ggccgaggccgacgcgctgc 532
           ||||||||||||||||||||
Sbjct: 184 ggccgaggccgacgcgctgc 165
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 138      cgacgcctacccctccgccgccgacgcctact 169
                ||||||| || || ||||||||||||||||||
Sbjct: 16681724 cgacgccgacgccaccgccgccgacgcctact 16681693
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 416     gggtgcaggcggcggcccgc 435
               ||||||||||||||||||||
Sbjct: 6917357 gggtgcaggcggcggcccgc 6917376
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>ref|XM_235825.3| PREDICTED: Rattus norvegicus sestrin 3 (predicted)
           (Sesn3_predicted), mRNA
          Length = 2052

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 513 ggccgaggccgacgcgctgc 532
           ||||||||||||||||||||
Sbjct: 183 ggccgaggccgacgcgctgc 164
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 381     gaagccggcgccgtcggcgg 400
               ||||||||||||||||||||
Sbjct: 4323487 gaagccggcgccgtcggcgg 4323468
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>gb|AY156931.1| Tupaia belangeri alpha-2A adrenoceptor mRNA, complete cds
          Length = 1376

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 495 cgtggccgcgaggatggcggccgaggcc 522
           ||||||| |||||||| |||||||||||
Sbjct: 275 cgtggccacgaggatgtcggccgaggcc 248
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 520     gccgacgcgctgcgcgcgga 539
               ||||||||||||||||||||
Sbjct: 2597113 gccgacgcgctgcgcgcgga 2597094
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>dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1115_C05
          Length = 146585

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 138   cgacgcctacccctccgccgccgacgcctact 169
             ||||||| || || ||||||||||||||||||
Sbjct: 21636 cgacgccgacgccaccgccgccgacgcctact 21605
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>dbj|AK109042.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-D04, full
           insert sequence
          Length = 1186

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 138 cgacgcctacccctccgccgccgacgcctact 169
           ||||||| || || ||||||||||||||||||
Sbjct: 411 cgacgccgacgccaccgccgccgacgcctact 442
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>gb|AY104298.1| Zea mays PCO095355 mRNA sequence
          Length = 950

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 486 ggcggacgccgtggccgcga 505
           ||||||||||||||||||||
Sbjct: 159 ggcggacgccgtggccgcga 140
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>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome
          Length = 2153922

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 27      acagtcaaccacaccgacctcgac 50
               |||| |||||||||||||||||||
Sbjct: 1906050 acagccaaccacaccgacctcgac 1906027
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>emb|CT485606.7| Mouse DNA sequence from clone RP24-246F10 on chromosome 9, complete
             sequence
          Length = 165446

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 513   ggccgaggccgacgcgctgc 532
             ||||||||||||||||||||
Sbjct: 38232 ggccgaggccgacgcgctgc 38213


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,384,117
Number of Sequences: 3902068
Number of extensions: 3384117
Number of successful extensions: 88245
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83061
Number of HSP's gapped (non-prelim): 5180
length of query: 597
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 574
effective length of database: 17,143,297,704
effective search space: 9840252882096
effective search space used: 9840252882096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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