ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart55b02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104112.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-G09, full insert sequence Length = 1019 Score = 325 bits (164), Expect = 9e-86 Identities = 299/344 (86%) Strand = Plus / Plus Query: 253 gaattcgctggcagcgtatccttggaaccatcatcaccagctgttgagtacaggcctgcc 312 ||||| ||||| | || ||||||||||||||| |||||||||||||||||||| ||| || Sbjct: 252 gaatttgctggtaacgcatccttggaaccatcgtcaccagctgttgagtacagacctccc 311 Query: 313 aataatgcagcccaggtggcaacagaggataatgtcgacccggataatatgtcatacgag 372 ||||||||||| ||||| ||||| || || ||||| ||||| ||||||||||| |||||| Sbjct: 312 aataatgcagctcaggttgcaacggaagacaatgttgaccctgataatatgtcttacgag 371 Query: 373 caactacaagcaatcggtgaagaggtaggaactcaatccagaggattatctgatgacctg 432 |||||||||||| | || |||| ||||||| |||||||||||||||||||||||||||| Sbjct: 372 caactacaagcattaggggaagcagtaggaaatcaatccagaggattatctgatgacctg 431 Query: 433 ataagctacctggagccttttaggaacaaatgtaacttcttctcgagcaaaaagaatacc 492 ||| |||| ||| |||||||| ||||||||| | ||||||||| || || |||||| Sbjct: 432 atatgctatttggtgccttttaagaacaaatgcagcttcttctccaggaagaagaatgat 491 Query: 493 gatgaatgcgtgatctgcaaatcgaactataaaagccgagagaagttgataaggctgccc 552 || ||||| |||||||| ||||||| |||||||||||| |||| |||||||| ||||| Sbjct: 492 gaggaatgtgtgatctgtaaatcgacttataaaagccgacagaaattgataagattgccc 551 Query: 553 tgcagccattgttaccatgcaggttgcataactcgctggcttaa 596 |||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 552 tgcagccactgttaccatgcagattgcataactcgctggcttaa 595 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Plus Query: 120 ttcagcaatggcagctcccaatacctacgcagtccatgtctcctcggagacccataagat 179 |||| |||||||| |||| |||||||| |||||||| ||||||| || ||||| | ||| Sbjct: 110 ttcatcaatggcaactccaaatacctattcagtccatatctcctcagaaacccacaggat 169 Query: 180 cgaggcctggtgcgaatcggacgaggctttggccaggcaactgcaagaggaggag 234 |||||||||| | ||| || || ||||| || ||||| |||||||||||||| Sbjct: 170 tgaggcctggttggcatctgatgaagctttagctaggcagttgcaagaggaggag 224
>dbj|AK066238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059J01, full insert sequence Length = 1199 Score = 325 bits (164), Expect = 9e-86 Identities = 299/344 (86%) Strand = Plus / Plus Query: 253 gaattcgctggcagcgtatccttggaaccatcatcaccagctgttgagtacaggcctgcc 312 ||||| ||||| | || ||||||||||||||| |||||||||||||||||||| ||| || Sbjct: 266 gaatttgctggtaacgcatccttggaaccatcgtcaccagctgttgagtacagacctccc 325 Query: 313 aataatgcagcccaggtggcaacagaggataatgtcgacccggataatatgtcatacgag 372 ||||||||||| ||||| ||||| || || ||||| ||||| ||||||||||| |||||| Sbjct: 326 aataatgcagctcaggttgcaacggaagacaatgttgaccctgataatatgtcttacgag 385 Query: 373 caactacaagcaatcggtgaagaggtaggaactcaatccagaggattatctgatgacctg 432 |||||||||||| | || |||| ||||||| |||||||||||||||||||||||||||| Sbjct: 386 caactacaagcattaggggaagcagtaggaaatcaatccagaggattatctgatgacctg 445 Query: 433 ataagctacctggagccttttaggaacaaatgtaacttcttctcgagcaaaaagaatacc 492 ||| |||| ||| |||||||| ||||||||| | ||||||||| || || |||||| Sbjct: 446 atatgctatttggtgccttttaagaacaaatgcagcttcttctccaggaagaagaatgat 505 Query: 493 gatgaatgcgtgatctgcaaatcgaactataaaagccgagagaagttgataaggctgccc 552 || ||||| |||||||| ||||||| |||||||||||| |||| |||||||| ||||| Sbjct: 506 gaggaatgtgtgatctgtaaatcgacttataaaagccgacagaaattgataagattgccc 565 Query: 553 tgcagccattgttaccatgcaggttgcataactcgctggcttaa 596 |||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 566 tgcagccactgttaccatgcagattgcataactcgctggcttaa 609 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Plus Query: 120 ttcagcaatggcagctcccaatacctacgcagtccatgtctcctcggagacccataagat 179 |||| |||||||| |||| |||||||| |||||||| ||||||| || ||||| | ||| Sbjct: 124 ttcatcaatggcaactccaaatacctattcagtccatatctcctcagaaacccacaggat 183 Query: 180 cgaggcctggtgcgaatcggacgaggctttggccaggcaactgcaagaggaggag 234 |||||||||| | ||| || || ||||| || ||||| |||||||||||||| Sbjct: 184 tgaggcctggttggcatctgatgaagctttagctaggcagttgcaagaggaggag 238
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 117 bits (59), Expect = 4e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 502 gtgatctgcaaatcgaactataaaagccgagagaagttgataaggctgccctgcagccat 561 |||||||| ||||||| |||||||||||| |||| |||||||| ||||||||||||| Sbjct: 20228215 gtgatctgtaaatcgacttataaaagccgacagaaattgataagattgccctgcagccac 20228156 Query: 562 tgttaccatgcaggttgcataactcgctggcttaa 596 ||||||||||||| ||||||||||||||||||||| Sbjct: 20228155 tgttaccatgcagattgcataactcgctggcttaa 20228121 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Minus Query: 371 agcaactacaagcaatcggtgaagaggtaggaactcaatccagaggattatctgatgacc 430 |||||||||||||| | || |||| ||||||| |||||||||||||||||||||||||| Sbjct: 20228472 agcaactacaagcattaggggaagcagtaggaaatcaatccagaggattatctgatgacc 20228413 Query: 431 tgataagctacctggagccttttaggaacaaatgtaacttcttctcgagcaaaaagaat 489 ||||| |||| ||| |||||||| ||||||||| | ||||||||| || || |||||| Sbjct: 20228412 tgatatgctatttggtgccttttaagaacaaatgcagcttcttctccaggaagaagaat 20228354 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 270 atccttggaaccatcatcaccagctgttgagtacaggcctgccaataatgcagcccaggt 329 ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 20229678 atccttggaaccatcgtcaccagctgttgagtacagacctcccaataatgcagctcaggt 20229619 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 120 ttcagcaatggcagctcccaatacctacgcagtccatgtctcctcggagacccataagat 179 |||| |||||||| |||| |||||||| |||||||| ||||||| || ||||| | ||| Sbjct: 20229959 ttcatcaatggcaactccaaatacctattcagtccatatctcctcagaaacccacaggat 20229900 Query: 180 cgaggcctggtgcgaatcggacgaggctttggccaggcaactgcaagaggaggag 234 |||||||||| | ||| || || ||||| || ||||| |||||||||||||| Sbjct: 20229899 tgaggcctggttggcatctgatgaagctttagctaggcagttgcaagaggaggag 20229845 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Minus Query: 325 caggtggcaacagaggataatgtcgacccggataatatgtcatacgag 372 ||||| ||||| || || ||||| ||||| ||||||||||| |||||| Sbjct: 20229474 caggttgcaacggaagacaatgttgaccctgataatatgtcttacgag 20229427
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 117 bits (59), Expect = 4e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 502 gtgatctgcaaatcgaactataaaagccgagagaagttgataaggctgccctgcagccat 561 |||||||| ||||||| |||||||||||| |||| |||||||| ||||||||||||| Sbjct: 7342 gtgatctgtaaatcgacttataaaagccgacagaaattgataagattgccctgcagccac 7283 Query: 562 tgttaccatgcaggttgcataactcgctggcttaa 596 ||||||||||||| ||||||||||||||||||||| Sbjct: 7282 tgttaccatgcagattgcataactcgctggcttaa 7248 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Minus Query: 371 agcaactacaagcaatcggtgaagaggtaggaactcaatccagaggattatctgatgacc 430 |||||||||||||| | || |||| ||||||| |||||||||||||||||||||||||| Sbjct: 7599 agcaactacaagcattaggggaagcagtaggaaatcaatccagaggattatctgatgacc 7540 Query: 431 tgataagctacctggagccttttaggaacaaatgtaacttcttctcgagcaaaaagaat 489 ||||| |||| ||| |||||||| ||||||||| | ||||||||| || || |||||| Sbjct: 7539 tgatatgctatttggtgccttttaagaacaaatgcagcttcttctccaggaagaagaat 7481 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 270 atccttggaaccatcatcaccagctgttgagtacaggcctgccaataatgcagcccaggt 329 ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 8805 atccttggaaccatcgtcaccagctgttgagtacagacctcccaataatgcagctcaggt 8746 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 120 ttcagcaatggcagctcccaatacctacgcagtccatgtctcctcggagacccataagat 179 |||| |||||||| |||| |||||||| |||||||| ||||||| || ||||| | ||| Sbjct: 9086 ttcatcaatggcaactccaaatacctattcagtccatatctcctcagaaacccacaggat 9027 Query: 180 cgaggcctggtgcgaatcggacgaggctttggccaggcaactgcaagaggaggag 234 |||||||||| | ||| || || ||||| || ||||| |||||||||||||| Sbjct: 9026 tgaggcctggttggcatctgatgaagctttagctaggcagttgcaagaggaggag 8972 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Minus Query: 325 caggtggcaacagaggataatgtcgacccggataatatgtcatacgag 372 ||||| ||||| || || ||||| ||||| ||||||||||| |||||| Sbjct: 8601 caggttgcaacggaagacaatgttgaccctgataatatgtcttacgag 8554
>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0047P18 Length = 169128 Score = 117 bits (59), Expect = 4e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 502 gtgatctgcaaatcgaactataaaagccgagagaagttgataaggctgccctgcagccat 561 |||||||| ||||||| |||||||||||| |||| |||||||| ||||||||||||| Sbjct: 121715 gtgatctgtaaatcgacttataaaagccgacagaaattgataagattgccctgcagccac 121656 Query: 562 tgttaccatgcaggttgcataactcgctggcttaa 596 ||||||||||||| ||||||||||||||||||||| Sbjct: 121655 tgttaccatgcagattgcataactcgctggcttaa 121621 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Minus Query: 371 agcaactacaagcaatcggtgaagaggtaggaactcaatccagaggattatctgatgacc 430 |||||||||||||| | || |||| ||||||| |||||||||||||||||||||||||| Sbjct: 121972 agcaactacaagcattaggggaagcagtaggaaatcaatccagaggattatctgatgacc 121913 Query: 431 tgataagctacctggagccttttaggaacaaatgtaacttcttctcgagcaaaaagaat 489 ||||| |||| ||| |||||||| ||||||||| | ||||||||| || || |||||| Sbjct: 121912 tgatatgctatttggtgccttttaagaacaaatgcagcttcttctccaggaagaagaat 121854 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 270 atccttggaaccatcatcaccagctgttgagtacaggcctgccaataatgcagcccaggt 329 ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 123178 atccttggaaccatcgtcaccagctgttgagtacagacctcccaataatgcagctcaggt 123119 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 120 ttcagcaatggcagctcccaatacctacgcagtccatgtctcctcggagacccataagat 179 |||| |||||||| |||| |||||||| |||||||| ||||||| || ||||| | ||| Sbjct: 123459 ttcatcaatggcaactccaaatacctattcagtccatatctcctcagaaacccacaggat 123400 Query: 180 cgaggcctggtgcgaatcggacgaggctttggccaggcaactgcaagaggaggag 234 |||||||||| | ||| || || ||||| || ||||| |||||||||||||| Sbjct: 123399 tgaggcctggttggcatctgatgaagctttagctaggcagttgcaagaggaggag 123345 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Minus Query: 325 caggtggcaacagaggataatgtcgacccggataatatgtcatacgag 372 ||||| ||||| || || ||||| ||||| ||||||||||| |||||| Sbjct: 122974 caggttgcaacggaagacaatgttgaccctgataatatgtcttacgag 122927
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 103 bits (52), Expect = 7e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 497 aatgcgtgatctgcaaatcgaactataaaagccgagagaagttgataaggctgccctgca 556 |||| ||||| || ||||||| |||||||||||| |||| |||||||| ||||||||| Sbjct: 17097288 aatgtgtgatatgtaaatcgacttataaaagccgacagaaattgataagattgccctgca 17097347 Query: 557 gccattgttaccatgcaggttgcataactcgctggcttaa 596 |||| ||||||||||| | ||||||||||||||||||||| Sbjct: 17097348 gccactgttaccatgcggattgcataactcgctggcttaa 17097387 Score = 44.1 bits (22), Expect = 0.52 Identities = 55/66 (83%) Strand = Plus / Plus Query: 424 gatgacctgataagctacctggagccttttaggaacaaatgtaacttcttctcgagcaaa 483 |||||||||||| |||| ||| |||||||| |||||| || | ||||||||| || || Sbjct: 17097080 gatgacctgatatgctatttggtgccttttaagaacaagtgcagcttcttctctaggaag 17097139 Query: 484 aagaat 489 |||||| Sbjct: 17097140 aagaat 17097145 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 274 ttggaaccatcatcaccagctg 295 |||||||||||||||||||||| Sbjct: 14560544 ttggaaccatcatcaccagctg 14560523
>dbj|AP004224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1111E11 Length = 152835 Score = 103 bits (52), Expect = 7e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 497 aatgcgtgatctgcaaatcgaactataaaagccgagagaagttgataaggctgccctgca 556 |||| ||||| || ||||||| |||||||||||| |||| |||||||| ||||||||| Sbjct: 10244 aatgtgtgatatgtaaatcgacttataaaagccgacagaaattgataagattgccctgca 10303 Query: 557 gccattgttaccatgcaggttgcataactcgctggcttaa 596 |||| ||||||||||| | ||||||||||||||||||||| Sbjct: 10304 gccactgttaccatgcggattgcataactcgctggcttaa 10343 Score = 44.1 bits (22), Expect = 0.52 Identities = 55/66 (83%) Strand = Plus / Plus Query: 424 gatgacctgataagctacctggagccttttaggaacaaatgtaacttcttctcgagcaaa 483 |||||||||||| |||| ||| |||||||| |||||| || | ||||||||| || || Sbjct: 10036 gatgacctgatatgctatttggtgccttttaagaacaagtgcagcttcttctctaggaag 10095 Query: 484 aagaat 489 |||||| Sbjct: 10096 aagaat 10101
>dbj|AP004723.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1126_G08 Length = 157455 Score = 103 bits (52), Expect = 7e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 497 aatgcgtgatctgcaaatcgaactataaaagccgagagaagttgataaggctgccctgca 556 |||| ||||| || ||||||| |||||||||||| |||| |||||||| ||||||||| Sbjct: 94237 aatgtgtgatatgtaaatcgacttataaaagccgacagaaattgataagattgccctgca 94296 Query: 557 gccattgttaccatgcaggttgcataactcgctggcttaa 596 |||| ||||||||||| | ||||||||||||||||||||| Sbjct: 94297 gccactgttaccatgcggattgcataactcgctggcttaa 94336 Score = 44.1 bits (22), Expect = 0.52 Identities = 55/66 (83%) Strand = Plus / Plus Query: 424 gatgacctgataagctacctggagccttttaggaacaaatgtaacttcttctcgagcaaa 483 |||||||||||| |||| ||| |||||||| |||||| || | ||||||||| || || Sbjct: 94029 gatgacctgatatgctatttggtgccttttaagaacaagtgcagcttcttctctaggaag 94088 Query: 484 aagaat 489 |||||| Sbjct: 94089 aagaat 94094
>ref|NM_001031315.1| Gallus gallus similar to chromosome 3 open reading frame 6 long isoform (LOC424906), mRNA Length = 3188 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 209 tggccaggcaactgcaagaggaggagga 236 |||||| ||||||||||||||||||||| Sbjct: 268 tggccaagcaactgcaagaggaggagga 295
>emb|AJ719498.1| Gallus gallus mRNA for hypothetical protein, clone 2n23 Length = 3188 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 209 tggccaggcaactgcaagaggaggagga 236 |||||| ||||||||||||||||||||| Sbjct: 268 tggccaagcaactgcaagaggaggagga 295
>emb|CR387711.1| Gallus gallus finished cDNA, clone ChEST536k16 Length = 1479 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 209 tggccaggcaactgcaagaggaggagga 236 |||||| ||||||||||||||||||||| Sbjct: 597 tggccaagcaactgcaagaggaggagga 624
>emb|BX930884.2| Gallus gallus finished cDNA, clone ChEST372i8 Length = 884 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 209 tggccaggcaactgcaagaggaggagga 236 |||||| ||||||||||||||||||||| Sbjct: 280 tggccaagcaactgcaagaggaggagga 307
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 34 agagaggaggtgggggcggaggcggcgc 61 |||| ||||||||||||||||||||||| Sbjct: 13382813 agaggggaggtgggggcggaggcggcgc 13382786
>emb|BX933052.1| Gallus gallus finished cDNA, clone ChEST908i10 Length = 794 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 209 tggccaggcaactgcaagaggaggagga 236 |||||| ||||||||||||||||||||| Sbjct: 237 tggccaagcaactgcaagaggaggagga 264
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427E01 Length = 146395 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 34 agagaggaggtgggggcggaggcggcgc 61 |||| ||||||||||||||||||||||| Sbjct: 144623 agaggggaggtgggggcggaggcggcgc 144596
>dbj|AP003952.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1294_G12 Length = 121979 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 34 agagaggaggtgggggcggaggcggcgc 61 |||| ||||||||||||||||||||||| Sbjct: 44245 agaggggaggtgggggcggaggcggcgc 44218
>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete sequence Length = 166185 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 gagagggacagagatagacaga 36 |||||||||||||||||||||| Sbjct: 89462 gagagggacagagatagacaga 89483
>gb|AC119877.9| Mus musculus chromosome 3, clone RP24-324H23, complete sequence Length = 155784 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagagg 40 |||||||||||||| ||||||||||| Sbjct: 14950 gagagggacagagagagacagagagg 14925
>gb|AC008228.5| Drosophila melanogaster clone BACR23E23, complete sequence Length = 162949 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 316 aatgcagcccaggtggcaacagagga 341 |||||||||||| ||||||||||||| Sbjct: 142304 aatgcagcccagctggcaacagagga 142279
>gb|AC010123.9| Drosophila melanogaster clone BACR35O22, complete sequence Length = 160444 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 316 aatgcagcccaggtggcaacagagga 341 |||||||||||| ||||||||||||| Sbjct: 88391 aatgcagcccagctggcaacagagga 88366
>gb|AC153900.8| Mus musculus 6 BAC RP23-36I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194216 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagagg 40 |||||||||||||| ||||||||||| Sbjct: 87183 gagagggacagagagagacagagagg 87208
>gb|AC111140.11| Mus musculus chromosome 3, clone RP23-369L16, complete sequence Length = 236182 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagagg 40 |||||||||||||| ||||||||||| Sbjct: 28857 gagagggacagagagagacagagagg 28882
>emb|AL662812.12| Mouse DNA sequence from clone RP23-48A2 on chromosome 11 Contains the gene for a novel protein similar to smoothelin Smtn, three novel genes, the Mybbp1a gene for MYB binding protein (P160) 1a, a ribosomal protein 7a (Rpl7a) pseudogene, the 5' end of the Ube2g1 gene for ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans) and four CpG islands, complete sequence Length = 258521 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagagg 40 |||||||||||||| ||||||||||| Sbjct: 145797 gagagggacagagaaagacagagagg 145822
>emb|AL662868.15| Mouse DNA sequence from clone RP23-144P24 on chromosome 11 Contains three novel genes, the 5' end of the Galnt9 gene for UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 9 and a CpG island, complete sequence Length = 198647 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagagg 40 |||||||||||||| ||||||||||| Sbjct: 36772 gagagggacagagagagacagagagg 36747
>gb|AC159195.2| Mus musculus BAC clone RP23-467E1 from chromosome 13, complete sequence Length = 194915 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagagg 40 ||||| |||||||||||||||||||| Sbjct: 103222 gagagagacagagatagacagagagg 103197
>dbj|AP003444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1164G11 Length = 142699 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 274 ttggaaccatcatcaccagctg 295 |||||||||||||||||||||| Sbjct: 41921 ttggaaccatcatcaccagctg 41900
>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0514H03 Length = 167230 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 274 ttggaaccatcatcaccagctg 295 |||||||||||||||||||||| Sbjct: 119857 ttggaaccatcatcaccagctg 119836
>gb|AC156502.2| Mus musculus BAC clone RP23-355N1 from 9, complete sequence Length = 204883 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 18 agggacagagatagacagagaggagg 43 ||||||||||| |||||||||||||| Sbjct: 95061 agggacagagacagacagagaggagg 95086
>dbj|AK072056.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110O03, full insert sequence Length = 3903 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 274 ttggaaccatcatcaccagctg 295 |||||||||||||||||||||| Sbjct: 3437 ttggaaccatcatcaccagctg 3458
>dbj|AK066435.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063I04, full insert sequence Length = 4594 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 274 ttggaaccatcatcaccagctg 295 |||||||||||||||||||||| Sbjct: 3530 ttggaaccatcatcaccagctg 3551
>gb|AE003587.4| Drosophila melanogaster chromosome 2L, section 4 of 83 of the complete sequence Length = 314549 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 316 aatgcagcccaggtggcaacagagga 341 |||||||||||| ||||||||||||| Sbjct: 154659 aatgcagcccagctggcaacagagga 154634
>emb|AL133445.4|CNS01DV1 Human chromosome 14 DNA sequence BAC R-1046B16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 190946 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 39 ggaggtgggggcggaggcggcg 60 |||||||||||||||||||||| Sbjct: 89974 ggaggtgggggcggaggcggcg 89953
>emb|X97194.1|RNMAFAEX4 R.norvegicus MAFA gene, exon4 Length = 477 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 13 ctgagagggacagagatagacagaga 38 ||||||| |||||||||||||||||| Sbjct: 189 ctgagagagacagagatagacagaga 214
>emb|CT033793.10| Mouse DNA sequence from clone RP23-21O10 on chromosome 9, complete sequence Length = 212761 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 18 agggacagagatagacagagaggagg 43 ||||||||||| |||||||||||||| Sbjct: 113118 agggacagagacagacagagaggagg 113143
>emb|AL772224.2| Mouse DNA sequence from clone RP23-131N18 on chromosome 2, complete sequence Length = 182544 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagagg 40 |||||||||||||| ||||||||||| Sbjct: 135258 gagagggacagagagagacagagagg 135233
>gb|AC166650.7| Mus musculus chromosome 5, clone RP23-434O9, complete sequence Length = 207176 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 61283 gagagggacagagagagacagagag 61307
>gb|AC167172.3| Mus musculus BAC clone RP23-166M7 from chromosome 3, complete sequence Length = 204419 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 16 agagggacagagatagacagagagg 40 ||||||||||||| ||||||||||| Sbjct: 77584 agagggacagagagagacagagagg 77560
>gb|AC162034.6| Mus musculus chromosome 7, clone RP23-285B12, complete sequence Length = 197907 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 77019 gagagggacagagacagacagagag 76995
>gb|AC105981.10| Mus musculus chromosome 8, clone RP24-210I22, complete sequence Length = 167656 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 ||||| ||||||||||||||||||| Sbjct: 22702 gagagagacagagatagacagagag 22726
>gb|AC166649.5| Mus musculus chromosome 5, clone RP23-379D24, complete sequence Length = 176315 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 164397 gagagggacagagagagacagagag 164373
>ref|NM_197753.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBb0089A17.6), mRNA Length = 1710 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 39 ggaggtgggggcggaggcggcgccg 63 |||||||| |||||||||||||||| Sbjct: 1076 ggaggtggcggcggaggcggcgccg 1052
>gb|AC120543.7| Mus musculus chromosome 8, clone RP23-330A24, complete sequence Length = 210696 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 ||||| ||||||||||||||||||| Sbjct: 161146 gagagagacagagatagacagagag 161170
>gb|AC110513.6| Mus musculus chromosome 3, clone RP24-147L5, complete sequence Length = 154446 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 91084 gagagggacagagaaagacagagag 91108
>gb|AC167169.2| Mus musculus BAC clone RP24-257G14 from chromosome 16, complete sequence Length = 150549 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||||||| |||||| Sbjct: 15446 gagagggacagagatagaaagagag 15470
>gb|AC079216.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-353E8, complete sequence Length = 221748 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||||||| |||||| Sbjct: 183398 gagagggacagagatagagagagag 183374
>gb|AC161197.9| Mus musculus chromosome 7, clone RP23-179K11, complete sequence Length = 240657 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 35326 gagagggacagagacagacagagag 35350
>gb|AC147048.2| Mus musculus BAC clone RP23-91H23 from chromosome 8, complete sequence Length = 124152 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 agacagagaggaggtgggggc 50 ||||||||||||||||||||| Sbjct: 58775 agacagagaggaggtgggggc 58755
>gb|AC163328.6| Mus musculus chromosome 5, clone RP24-405J8, complete sequence Length = 141045 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 16397 gagagggacagagagagacagagag 16421
>gb|AC167023.2| Mus musculus BAC clone RP23-21J7 from chromosome 7, complete sequence Length = 214762 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 174547 gagagggacagagagagacagagag 174523
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 gagatagacagagaggaggtggggg 49 |||||||| |||||||||||||||| Sbjct: 34174350 gagatagagagagaggaggtggggg 34174374
>gb|AC123847.4| Mus musculus BAC clone RP23-443O1 from chromosome 3, complete sequence Length = 189689 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 20152 gagagggacagagagagacagagag 20128
>gb|AC140359.2| Mus musculus BAC clone RP24-240P8 from chromosome 5, complete sequence Length = 167021 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 522 taaaagccgagagaagttgat 542 ||||||||||||||||||||| Sbjct: 93116 taaaagccgagagaagttgat 93136
>gb|AC127685.4| Mus musculus BAC clone RP24-176M3 from chromosome 3, complete sequence Length = 166417 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 37526 gagagggacagagagagacagagag 37550
>gb|AC129605.4| Mus musculus BAC clone RP23-121N17 from chromosome 7, complete sequence Length = 232568 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 127848 gagagggacagagagagacagagag 127872
>gb|AC102819.5| Mus musculus chromosome 8, clone RP23-117H21, complete sequence Length = 191116 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 ||||| ||||||||||||||||||| Sbjct: 173783 gagagagacagagatagacagagag 173807
>gb|AC122519.4| Mus musculus BAC clone RP24-462C10 from chromosome 6, complete sequence Length = 138242 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 63113 gagagggacagagagagacagagag 63089
>gb|AC127281.3| Mus musculus BAC clone RP24-273C15 from chromosome 13, complete sequence Length = 154576 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 149893 gagagggacagagagagacagagag 149869
>gb|AC124463.2| Mus musculus BAC clone RP24-152K14 from chromosome 1, complete sequence Length = 153199 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 ||||| ||||||||||||||||||| Sbjct: 67616 gagagagacagagatagacagagag 67592
>gb|AC125226.3| Mus musculus BAC clone RP23-39D21 from 7, complete sequence Length = 133624 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 40236 gagagggacagagagagacagagag 40212
>gb|AC125220.3| Mus musculus BAC clone RP23-70H20 from 15, complete sequence Length = 184933 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 ||||| ||||||||||||||||||| Sbjct: 181381 gagagagacagagatagacagagag 181357
>gb|AC125353.2| Mus musculus BAC clone RP23-455B17 from 6, complete sequence Length = 171963 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 84691 gagagggacagagaaagacagagag 84715
>gb|AC110378.4| Mus musculus BAC clone RP24-193H8 from 6, complete sequence Length = 166527 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 127396 gagagggacagagagagacagagag 127420
>gb|AC122045.3| Mus musculus BAC clone RP24-449H18 from 5, complete sequence Length = 142673 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 522 taaaagccgagagaagttgat 542 ||||||||||||||||||||| Sbjct: 115075 taaaagccgagagaagttgat 115095
>gb|AC098727.3| Mus musculus BAC clone RP23-3H16 from 4, complete sequence Length = 231302 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 220593 gagagggacagagagagacagagag 220569
>gb|AC099593.6| Mus musculus chromosome 10, clone RP23-447D24, complete sequence Length = 176068 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 ||||| ||||||||||||||||||| Sbjct: 108964 gagagagacagagatagacagagag 108940
>gb|AC116773.8| Mus musculus chromosome 1, clone RP23-430H21, complete sequence Length = 210414 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 10252 gagagggacagagagagacagagag 10228
>gb|AC101788.5| Mus musculus chromosome 15, clone RP24-148C8, complete sequence Length = 190073 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 ||||| ||||||||||||||||||| Sbjct: 115981 gagagagacagagatagacagagag 116005
>emb|AL357061.19| Human DNA sequence from clone RP11-694F24 on chromosome 13 Contains the 5' end of a variant of the CLDN10 gene for claudin 10 (OSP-L, CPETRL3) and the 5' end of a novel gene, complete sequence Length = 70148 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 55369 gagagggacagagagagacagagag 55345
>gb|AC163719.4| Mus musculus BAC clone RP23-421M6 from chromosome 9, complete sequence Length = 177404 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 ||||| ||||||||||||||||||| Sbjct: 143917 gagagagacagagatagacagagag 143893
>emb|AL672240.13| Mouse DNA sequence from clone RP23-27I16 on chromosome 11, complete sequence Length = 224603 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 185137 gagagggacagagagagacagagag 185161
>emb|AL645985.30| Mouse DNA sequence from clone DN-240H8 on chromosome 3 Contains part of a novel gene, a ribosomal protein L36 (Rpl36) pseudogene and a pseudogene similar to part of ribosomal protein S2 (Rps2), complete sequence Length = 141661 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 16 agagggacagagatagacagagagg 40 ||||||||||||| ||||||||||| Sbjct: 2262 agagggacagagagagacagagagg 2286
>emb|AL591611.8| Mouse DNA sequence from clone RP23-228D6 on chromosome 4 Contains three novel genes, complete sequence Length = 140771 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 2788 gagagggacagagacagacagagag 2812
>gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox cluster, cholinesterase, and COLP5alpha genes, complete sequence Length = 796348 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||| |||||||||||||||| Sbjct: 324929 gagagggagagagatagacagagag 324905
>gb|AC158140.9| Mus musculus chromosome 8, clone RP24-267F22, complete sequence Length = 169796 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagaggagg 43 ||||| |||||||| |||||||||||||| Sbjct: 18952 gagagagacagagagagacagagaggagg 18924
>gb|AC021483.11| Homo sapiens, clone RP11-38G5, complete sequence Length = 163065 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 ||||| ||||||||||||||||||| Sbjct: 35719 gagagagacagagatagacagagag 35743
>dbj|AB161666.1| Cryptomeria japonica DNA, microsatellite locus, clone: CS2024 Length = 618 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 ||||| ||||||||||||||||||| Sbjct: 212 gagagagacagagatagacagagag 236
>gb|AC161889.5| Mus musculus 10 BAC RP23-361O18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228043 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 ||||| ||||||||||||||||||| Sbjct: 58132 gagagagacagagatagacagagag 58108
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 39 ggaggtgggggcggaggcggcgccg 63 |||||||| |||||||||||||||| Sbjct: 80100 ggaggtggcggcggaggcggcgccg 80124
>gb|AC133652.6| Mus musculus BAC clone RP24-283H8 from chromosome 16, complete sequence Length = 177172 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 138968 gagagggacagagagagacagagag 138992
>gb|AF329713.1|AF329713 Oncorhynchus mykiss clone OSU3 T cell receptor beta chain variable region gene, partial cds Length = 595 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 ||||| ||||||||||||||||||| Sbjct: 270 gagagagacagagatagacagagag 246
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 39 ggaggtgggggcggaggcggcgccg 63 |||||||| |||||||||||||||| Sbjct: 21648196 ggaggtggcggcggaggcggcgccg 21648220
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 gagatagacagagaggaggtggggg 49 |||| |||||||||||||||||||| Sbjct: 17429979 gagagagacagagaggaggtggggg 17429955
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 gagatagacagagaggaggtggggg 49 |||||||| |||||||||||||||| Sbjct: 34264822 gagatagagagagaggaggtggggg 34264846
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 gagatagacagagaggaggtggggg 49 |||||||| |||||||||||||||| Sbjct: 138162 gagatagagagagaggaggtggggg 138186
>gb|AC114755.4| Homo sapiens BAC clone RP11-274P16 from 2, complete sequence Length = 195403 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 ||||| ||||||||||||||||||| Sbjct: 86602 gagagagacagagatagacagagag 86578
>emb|AL824704.27| Mouse DNA sequence from clone RP23-286H14 on chromosome 4, complete sequence Length = 205555 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 ||||| ||||||||||||||||||| Sbjct: 53921 gagagagacagagatagacagagag 53897
>gb|AC011469.6|AC011469 Homo sapiens chromosome 19 clone CTC-475D23, complete sequence Length = 110569 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 18 agggacagagatagacagagaggag 42 ||||||||||| ||||||||||||| Sbjct: 37791 agggacagagagagacagagaggag 37815
>gb|AC104229.18| Homo sapiens chromosome 15, clone RP11-23A22, complete sequence Length = 168235 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||||||| |||||| Sbjct: 102789 gagagggacagagatagagagagag 102765
>gb|AC144444.2| Homo sapiens fosmid clone XXFOS-83269E11 from 2, complete sequence Length = 36482 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 13 ctgagagggacagagatagacagag 37 |||||||||||||||| |||||||| Sbjct: 9803 ctgagagggacagagagagacagag 9779
>emb|AL928974.12| Mouse DNA sequence from clone RP23-56C2 on chromosome 2, complete sequence Length = 195442 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 184939 gagagggacagagagagacagagag 184963
>emb|BX571735.6| Mouse DNA sequence from clone RP23-114O19 on chromosome X, complete sequence Length = 100343 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 82060 gagagggacagagagagacagagag 82036
>emb|AL929254.12| Mouse DNA sequence from clone RP23-456I1 on chromosome 2, complete sequence Length = 222104 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 34109 gagagggacagagagagacagagag 34133
>gb|AC102761.12| Mus musculus chromosome 8, clone RP24-227E21, complete sequence Length = 162108 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 ||||| ||||||||||||||||||| Sbjct: 133455 gagagagacagagatagacagagag 133431
>dbj|AP004647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1267_E11 Length = 117073 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 gagatagacagagaggaggtggggg 49 |||| |||||||||||||||||||| Sbjct: 113603 gagagagacagagaggaggtggggg 113579
>dbj|AP004465.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690C12 Length = 139693 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 gagatagacagagaggaggtggggg 49 |||| |||||||||||||||||||| Sbjct: 40824 gagagagacagagaggaggtggggg 40800
>dbj|AK106294.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-B09, full insert sequence Length = 1804 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 39 ggaggtgggggcggaggcggcgccg 63 |||||||| |||||||||||||||| Sbjct: 917 ggaggtggcggcggaggcggcgccg 893
>dbj|AK071722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109I18, full insert sequence Length = 2357 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 gagatagacagagaggaggtggggg 49 |||||||| |||||||||||||||| Sbjct: 136 gagatagagagagaggaggtggggg 112
>emb|AL445885.1|CNS07EES Human chromosome 14 DNA sequence BAC C-2506J14 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 170892 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 102265 gagagggacagagagagacagagag 102241
>gb|AC140552.3| Mus musculus BAC clone RP24-372G15 from 8, complete sequence Length = 130431 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 agacagagaggaggtgggggc 50 ||||||||||||||||||||| Sbjct: 104282 agacagagaggaggtgggggc 104262
>gb|AC124636.23| Mus musculus chromosome 16, clone RP23-454J20, complete sequence Length = 187247 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 agggacagagatagacagaga 38 ||||||||||||||||||||| Sbjct: 28584 agggacagagatagacagaga 28604
>emb|AL352976.3|CNS05TBV Human chromosome 14 DNA sequence BAC R-487K10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 180460 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 12292 gagagggacagagagagacagagag 12268
>dbj|AP001748.1| Homo sapiens genomic DNA, chromosome 21q, section 92/105 Length = 340000 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 ttggccaggcaactgcaagag 228 ||||||||||||||||||||| Sbjct: 264317 ttggccaggcaactgcaagag 264297
>gb|AC118731.11| Mus musculus chromosome 1, clone RP24-169M20, complete sequence Length = 160688 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 112066 gagagggacagagagagacagagag 112042
>gb|AC175031.2| Mus musculus BAC clone RP24-381O1 from chromosome 13, complete sequence Length = 98527 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 63515 gagagggacagagagagacagagag 63491
>gb|AC157939.15| Mus musculus chromosome 3, clone RP23-51P17, complete sequence Length = 240367 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 145515 gagagggacagagagagacagagag 145491
>emb|AL732365.17| Mouse DNA sequence from clone RP23-357O2 on chromosome X, complete sequence Length = 192659 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 ||||| ||||||||||||||||||| Sbjct: 44871 gagagagacagagatagacagagag 44895
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 39 ggaggtgggggcggaggcggcgccg 63 |||||||| |||||||||||||||| Sbjct: 21659859 ggaggtggcggcggaggcggcgccg 21659883
>emb|AL591973.1| Listeria monocytogenes strain EGD, complete genome, segment 1/12 Length = 200050 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 512 aatcgaactataaaagccgagagaagttg 540 ||||||||||||||| |||| |||||||| Sbjct: 108284 aatcgaactataaaatccgaaagaagttg 108312
>gb|AC147266.6| Mus musculus BAC clone RP24-246F6 from 8, complete sequence Length = 228955 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 agacagagaggaggtgggggc 50 ||||||||||||||||||||| Sbjct: 26129 agacagagaggaggtgggggc 26109
>gb|AC124344.6| Mus musculus BAC clone RP24-448A7 from 3, complete sequence Length = 219818 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 16082 gagagggacagagagagacagagag 16106
>gb|AC147230.3| Mus musculus BAC clone RP23-239N12 from 15, complete sequence Length = 255976 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 tgagagggacagagatagacagaga 38 ||||||||||||||| ||||||||| Sbjct: 31123 tgagagggacagagagagacagaga 31147
>gb|AC134897.4| Mus musculus BAC clone RP23-459D9 from 6, complete sequence Length = 173574 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||||||| |||||| Sbjct: 134220 gagagggacagagatagagagagag 134244
>gb|AC132363.3| Mus musculus BAC clone RP23-455N1 from 1, complete sequence Length = 180858 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 62161 gagagggacagagagagacagagag 62137
>gb|AC122220.4| Mus musculus BAC clone RP23-122B15 from 9, complete sequence Length = 188580 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 94371 gagagggacagagagagacagagag 94347
>emb|AL731829.10| Mouse DNA sequence from clone RP23-383P24 on chromosome 4 Contains part of the Astn2 gene for astrotactin 2 and a CpG island, complete sequence Length = 199452 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 86538 gagagggacagagagagacagagag 86514
>gb|AC168210.13| Mus musculus chromosome 5, clone RP24-72J20, complete sequence Length = 193750 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 183773 gagagggacagagagagacagagag 183749
>emb|AL136328.2|MM41M10 Mus musculus chromosome X, clone CT7-41M10 Length = 78785 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 9960 gagagggacagagagagacagagag 9984
>emb|AL844167.7| Mouse DNA sequence from clone RP23-66F6 on chromosome 2, complete sequence Length = 232834 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagag 39 |||||||||||||| |||||||||| Sbjct: 75024 gagagggacagagagagacagagag 75048
>dbj|AP002085.1| Homo sapiens genomic DNA, chromosome 21, BAC clone:KB274G10, MX1-D21S171 region, complete sequence Length = 97015 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 ttggccaggcaactgcaagag 228 ||||||||||||||||||||| Sbjct: 89826 ttggccaggcaactgcaagag 89806
>dbj|AP001631.1| Homo sapiens genomic DNA, chromosome 21, clone:KB2007G4, MX1-D21S171 region, complete sequence Length = 148179 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 ttggccaggcaactgcaagag 228 ||||||||||||||||||||| Sbjct: 68604 ttggccaggcaactgcaagag 68584
>gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, complete sequence Length = 190298 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 136927 gagagagacagagatagacagaga 136950
>gb|AC160526.13| Mus musculus chromosome 8, clone RP24-191C23, complete sequence Length = 174746 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 caggcaactgcaagaggaggagga 236 |||||||||||||| ||||||||| Sbjct: 71885 caggcaactgcaaggggaggagga 71862
>gb|AC153494.25| Mus musculus 10 BAC RP23-345J24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 231991 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gagggacagagatagacaga 36 |||||||||||||||||||| Sbjct: 161485 gagggacagagatagacaga 161504
>gb|AC103624.9| Mus musculus chromosome 5, clone RP24-258B22, complete sequence Length = 172330 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 agagggacagagatagacagagag 39 ||||||||||||| |||||||||| Sbjct: 143468 agagggacagagagagacagagag 143445
>gb|AC159290.2| Mus musculus BAC clone RP23-291I2 from chromosome 13, complete sequence Length = 231853 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 agagggacagagatagacagagag 39 |||| ||||||||||||||||||| Sbjct: 31684 agagagacagagatagacagagag 31707
>gb|AC165085.3| Mus musculus BAC clone RP23-222G22 from chromosome 6, complete sequence Length = 201337 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 agagggacagagatagacagagag 39 |||| ||||||||||||||||||| Sbjct: 162168 agagagacagagatagacagagag 162145
>gb|AC161528.14| Mus musculus chromosome 8, clone RP23-369H18, complete sequence Length = 206302 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 148311 gagagagacagagatagacagaga 148288
>gb|DQ112059.1| Perna viridis clone PV129 microsatellite sequences Length = 494 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 474 gagagagacagagatagacagaga 451
>gb|AC101728.10| Mus musculus chromosome 19, clone RP23-328I5, complete sequence Length = 184577 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 117141 gagagggacagagagagacagaga 117164
>gb|AC107700.12| Mus musculus chromosome 3, clone RP23-288N9, complete sequence Length = 194390 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 41702 gagagggacagagagagacagaga 41725
>gb|AC163686.3| Mus musculus BAC clone RP23-3C10 from chromosome 6, complete sequence Length = 209207 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagaggag 42 ||||| |||||||| ||||||||||||| Sbjct: 92036 gagagagacagagagagacagagaggag 92063
>gb|AC165164.4| Mus musculus BAC clone RP23-117C21 from chromosome 10, complete sequence Length = 189986 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 agagggacagagatagacagagag 39 |||| ||||||||||||||||||| Sbjct: 91740 agagagacagagatagacagagag 91763
>gb|AC159817.2| Mus musculus BAC clone RP23-228E8 from chromosome 9, complete sequence Length = 193445 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 86675 gagagagacagagatagacagaga 86698
>gb|AC138320.12| Mus musculus chromosome 5, clone RP23-181I1, complete sequence Length = 230584 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 gagggacagagatagacagagagg 40 |||||||||||| ||||||||||| Sbjct: 125648 gagggacagagagagacagagagg 125671
>gb|AC118628.11| Mus musculus chromosome 19, clone RP24-92P15, complete sequence Length = 202071 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagaggag 42 ||||| |||||||| ||||||||||||| Sbjct: 131950 gagagagacagagagagacagagaggag 131923
>gb|AC129553.10| Mus musculus chromosome 5, clone RP24-351J24, complete sequence Length = 152414 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 77596 gagagagacagagatagacagaga 77619
>gb|AC126590.5| Rattus norvegicus X BAC CH230-211O11 (Children's Hospital Oakland Research Institute) complete sequence Length = 159004 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 tagacagagaggaggtgggggcgg 52 ||||||||| |||||||||||||| Sbjct: 120556 tagacagagtggaggtgggggcgg 120579
>gb|AC123610.10| Mus musculus chromosome 9, clone RP23-343M15, complete sequence Length = 206563 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 agagggacagagatagacagagag 39 |||| ||||||||||||||||||| Sbjct: 142401 agagagacagagatagacagagag 142424
>gb|AC140460.3| Mus musculus BAC clone RP24-151D4 from chromosome 9, complete sequence Length = 196545 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 24157 gagagagacagagatagacagaga 24134
>gb|AC119893.9| Mus musculus chromosome 1, clone RP24-225A6, complete sequence Length = 179453 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 agagggacagagatagacagagag 39 ||||||||||||| |||||||||| Sbjct: 113789 agagggacagagagagacagagag 113812
>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence Length = 209986 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 86956 gagagagacagagatagacagaga 86933
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 aggcaactgcaagaggaggaggac 237 ||||||| |||||||||||||||| Sbjct: 1130920 aggcaaccgcaagaggaggaggac 1130943
>gb|AC102312.11| Mus musculus chromosome 10, clone RP24-428L4, complete sequence Length = 182940 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 81258 gagagggacagagagagacagaga 81235
>gb|AC119985.6| Mus musculus chromosome 5, clone RP24-502C10, complete sequence Length = 134739 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 34725 gagagagacagagatagacagaga 34748
>gb|AC100208.16| Mus musculus chromosome 7, clone RP23-59J14, complete sequence Length = 280763 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagaggag 42 ||||| |||||||| ||||||||||||| Sbjct: 62395 gagagagacagagagagacagagaggag 62422
>gb|AC158608.10| Mus musculus 10 BAC RP24-405N1 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 181588 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 agagggacagagatagacagagag 39 |||| ||||||||||||||||||| Sbjct: 38302 agagagacagagatagacagagag 38325
>gb|AC110883.12| Mus musculus chromosome 8, clone RP23-200N24, complete sequence Length = 293104 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 69411 gagagagacagagatagacagaga 69434
>gb|AC165316.4| Mus musculus chromosome 5, clone RP23-168G13, complete sequence Length = 205237 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 18469 gagagagacagagatagacagaga 18446
>gb|AC159624.2| Mus musculus BAC clone RP24-270G2 from chromosome 12, complete sequence Length = 187364 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 42293 gagagagacagagatagacagaga 42270
>gb|AC131110.3| Mus musculus BAC clone RP23-387J23 from chromosome 6, complete sequence Length = 205463 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 acctggagccttttaggaac 459 |||||||||||||||||||| Sbjct: 119807 acctggagccttttaggaac 119826
>gb|AC121286.7| Mus musculus chromosome 12, clone RP23-36H21, complete sequence Length = 227648 Score = 40.1 bits (20), Expect = 8.1 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 14 tgagagggacagagatagacagagaggaggtggggg 49 |||||| |||||||||||||| ||| |||||||||| Sbjct: 111398 tgagagagacagagatagacaaaga-gaggtggggg 111432
>gb|AC115733.14| Mus musculus chromosome 16, clone RP23-466L17, complete sequence Length = 203973 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 tcacaattcagcaatggcag 133 |||||||||||||||||||| Sbjct: 117322 tcacaattcagcaatggcag 117341
>gb|AC132292.3| Mus musculus BAC clone RP24-319L4 from chromosome 5, complete sequence Length = 160517 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagaggag 42 ||||| |||||||| ||||||||||||| Sbjct: 155063 gagagagacagagagagacagagaggag 155036
>gb|AC123533.4| Mus musculus BAC clone RP23-269E2 from chromosome 14, complete sequence Length = 187119 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 111339 gagagggacagagagagacagaga 111316
>ref|XM_533274.2| PREDICTED: Canis familiaris similar to pre-mRNA cleavage factor I, 59 kDa subunit (LOC476066), mRNA Length = 3598 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 agagaggaggtgggggcgga 53 |||||||||||||||||||| Sbjct: 874 agagaggaggtgggggcgga 855
>emb|CT010581.10| Mouse DNA sequence from clone RP23-104J14 on chromosome 16, complete sequence Length = 218225 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 99533 gagagggacagagagagacagaga 99510
>gb|AC124425.3| Mus musculus BAC clone RP24-230N16 from chromosome 5, complete sequence Length = 178931 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagaggag 42 ||||| |||||||| ||||||||||||| Sbjct: 29477 gagagagacagagagagacagagaggag 29450
>gb|AC125081.3| Mus musculus BAC clone RP24-89D17 from chromosome 3, complete sequence Length = 220895 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 gacagagatagacagagagg 40 |||||||||||||||||||| Sbjct: 34230 gacagagatagacagagagg 34211
>gb|AC130206.2| Mus musculus BAC clone RP24-448F6 from chromosome 13, complete sequence Length = 155659 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 9001 gagagggacagagagagacagaga 8978
>gb|AC144508.3| Mus musculus BAC clone RP24-152C23 from chromosome 15, complete sequence Length = 155524 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 76678 gagagagacagagatagacagaga 76655
>gb|AC126556.4| Mus musculus BAC clone RP23-64L3 from chromosome 15, complete sequence Length = 179685 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 18719 gagagagacagagatagacagaga 18696
>gb|AC131671.3| Mus musculus BAC clone RP23-312H8 from chromosome 3, complete sequence Length = 195851 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 agagggacagagatagacagagag 39 |||| ||||||||||||||||||| Sbjct: 2832 agagagacagagatagacagagag 2855
>gb|AC126262.4| Mus musculus BAC clone RP23-359F12 from chromosome 12, complete sequence Length = 208710 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 agaggaggtgggggcggagg 55 |||||||||||||||||||| Sbjct: 94279 agaggaggtgggggcggagg 94260
>gb|AC140424.2| Mus musculus BAC clone RP23-112O8 from chromosome 9, complete sequence Length = 179943 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 50144 gagagagacagagatagacagaga 50167
>gb|AC090821.13| Homo sapiens chromosome 8, clone CTD-2309H9, complete sequence Length = 166843 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 156731 gagagggacagagagagacagaga 156708
>gb|AC125399.3| Mus musculus BAC clone RP24-245C15 from chromosome 14, complete sequence Length = 195425 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 agagatagacagagaggagg 43 |||||||||||||||||||| Sbjct: 22265 agagatagacagagaggagg 22284
>gb|AC129300.3| Mus musculus BAC clone RP24-427A8 from chromosome 7, complete sequence Length = 155123 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagaggag 42 ||||| |||||||| ||||||||||||| Sbjct: 19468 gagagagacagagagagacagagaggag 19441
>gb|AC123553.4| Mus musculus BAC clone RP24-566O21 from chromosome 3, complete sequence Length = 138553 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 106225 gagagggacagagagagacagaga 106248
>gb|AC122434.2| Mus musculus BAC clone RP24-198G2 from chromosome 8, complete sequence Length = 168940 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 ttaggaacaaatgtaacttc 471 |||||||||||||||||||| Sbjct: 58937 ttaggaacaaatgtaacttc 58918
>gb|AC117187.3| Mus musculus BAC clone RP23-41M4 from 1, complete sequence Length = 138404 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 gagggacagagatagacagagagg 40 |||||||||||||||| ||||||| Sbjct: 14752 gagggacagagatagatagagagg 14775
>gb|AC108946.4| Mus musculus BAC clone RP23-134N13 from 3, complete sequence Length = 183446 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 agagggacagagatagacagagag 39 |||| ||||||||||||||||||| Sbjct: 153588 agagagacagagatagacagagag 153611
>gb|AC123556.4| Mus musculus BAC clone RP23-176M9 from 1, complete sequence Length = 198900 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 gagggacagagatagacagagagg 40 |||||||||||||||| ||||||| Sbjct: 169990 gagggacagagatagatagagagg 170013
>gb|AC121579.3| Mus musculus BAC clone RP23-255H8 from 3, complete sequence Length = 184377 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 agagggacagagatagacagagag 39 |||| ||||||||||||||||||| Sbjct: 89266 agagagacagagatagacagagag 89289
>gb|AC098728.3| Mus musculus BAC clone RP23-3H22 from 15, complete sequence Length = 245757 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 156451 gagagagacagagatagacagaga 156428
>gb|AC121988.2| Mus musculus BAC clone RP24-295B16 from 10, complete sequence Length = 154373 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 118390 gagagggacagagaaagacagaga 118367
>ref|XM_646735.1| Entamoeba histolytica HM-1:IMSS Rab family GTPase (145.t00005) partial mRNA Length = 702 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aattcagcaatggcagctcc 137 |||||||||||||||||||| Sbjct: 509 aattcagcaatggcagctcc 490
>gb|AC107842.13| Mus musculus chromosome 1, clone RP23-304O9, complete sequence Length = 215781 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 163440 gagagagacagagatagacagaga 163463
>gb|AC113597.12| Mus musculus chromosome 1, clone RP23-375F6, complete sequence Length = 224996 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 149961 gagagggacagagagagacagaga 149984
>gb|AF365881.1| Vitis vinifera clone MHD145 resistance protein gene, partial cds Length = 619 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 caactacaagcaatcggtgaagag 396 |||||| ||||||||||||||||| Sbjct: 215 caactagaagcaatcggtgaagag 238
>gb|AC101205.7| Mus musculus chromosome 14, clone RP23-178N17, complete sequence Length = 236164 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 1622 gagagggacagagagagacagaga 1645
>gb|AC163198.7| Mus musculus 6 BAC RP23-174M4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188300 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 52600 gagagggacagagagagacagaga 52623
>gb|AC113043.7| Mus musculus chromosome 1, clone RP23-243C7, complete sequence Length = 191557 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 102795 gagagggacagagacagacagaga 102818
>emb|BX004827.18| Human DNA sequence from clone RP13-391G2 on chromosome X Contains the SHOX gene for short stature homeobox and seven CpG islands, complete sequence Length = 119555 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 76540 gagagagacagagatagacagaga 76517 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 76301 gagagagacagagatagacagaga 76278
>emb|AL672277.20| Human DNA sequence from clone RP11-309M23 on chromosome X contains a novel gene and a ribosomal protein L14 (RPL14) pseudogene, complete sequence Length = 131682 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 agagggacagagatagacagagag 39 ||||||||||||| |||||||||| Sbjct: 36195 agagggacagagagagacagagag 36172
>emb|AL358972.13| Human DNA sequence from clone RP11-347L18 on chromosome 6 Contains a novel gene, complete sequence Length = 172606 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 cgtctcacaaggcggcaggcaagggaag 111 ||||||||| ||||||||||||| |||| Sbjct: 6125 cgtctcacatggcggcaggcaagagaag 6152
>emb|AL355493.14| Human DNA sequence from clone RP11-748L13 on chromosome 10 Contains the 3' end of a novel pseudogene (FLJ10376), a pseudogene similar to part of breast cancer antigen NY-BR-1 (NY-BR-1), three novel pseudogenes and two CpG islands, complete sequence Length = 133954 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 cgtctcacaaggcggcaggcaagggaag 111 ||||||||| ||||||||||||| |||| Sbjct: 101272 cgtctcacatggcggcaggcaagagaag 101245
>gb|AC108527.6| Rattus norvegicus 9 BAC CH230-7F11 (Children's Hospital Oakland Research Institute) complete sequence Length = 225777 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 66043 gagagagacagagatagacagaga 66020
>emb|AL122008.28|HSJ799P18 Human DNA sequence from clone RP4-799P18 on chromosome 1q42.2-43 Contains the 3' end of the SLC35F3 gene for solute carrier family 35 member F3, two novel genes and three CpG islands, complete sequence Length = 144407 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 546 gctgccctgcagccattgttacca 569 ||||||||||||||||||| |||| Sbjct: 46046 gctgccctgcagccattgtcacca 46023
>emb|AL035700.13|HS75K24 Human DNA sequence from clone RP1-75K24 on chromosome 6q13-15, complete sequence Length = 80279 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 tttaggaacaaatgtaactt 470 |||||||||||||||||||| Sbjct: 32936 tttaggaacaaatgtaactt 32917
>gb|AC158747.3| Mus musculus chromosome 15, clone RP24-248P22, complete sequence Length = 156293 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 34205 gagagagacagagatagacagaga 34228
>emb|AL008718.23|HS268H5 Human DNA sequence from clone CTA-268H5 on chromosome 22q13.2-13.3, complete sequence Length = 188833 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 gagaggaggtgggggcggag 54 |||||||||||||||||||| Sbjct: 90885 gagaggaggtgggggcggag 90904
>gb|AC105600.5| Rattus norvegicus 4 BAC CH230-209E1 (Children's Hospital Oakland Research Institute) complete sequence Length = 218874 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 gacagagatagacagagaggaggt 44 |||||||| ||||||||||||||| Sbjct: 60758 gacagagagagacagagaggaggt 60781
>ref|NM_001006245.1| Gallus gallus similar to CXYorf1-related protein (LOC418145), mRNA Length = 2066 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 gaggaggtgggggcggaggcggcg 60 ||||||||||||| |||||||||| Sbjct: 971 gaggaggtgggggaggaggcggcg 948
>gb|AC160559.5| Mus musculus BAC clone RP24-404N24 from chromosome 10, complete sequence Length = 157670 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 57133 gagagagacagagatagacagaga 57156
>gb|AC164177.6| Mus musculus 10 BAC RP23-102O12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196230 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atggcagctcccaataccta 146 |||||||||||||||||||| Sbjct: 176199 atggcagctcccaataccta 176218
>emb|AL592551.10| Mouse DNA sequence from clone RP23-12I13 on chromosome 11, complete sequence Length = 215657 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 agagggacagagatagacagagag 39 ||||||| |||||||||||||||| Sbjct: 24269 agagggagagagatagacagagag 24292
>emb|AL662803.11| Mouse DNA sequence from clone RP23-215N10 on chromosome 11 Contains a novel gene, complete sequence Length = 155034 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 96971 gagagggacagagagagacagaga 96948
>gb|AC132032.1| Homo sapiens 3 BAC RP11-4H14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 106938 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 56244 gagagggacagagagagacagaga 56267
>emb|BX001068.7| Mouse DNA sequence from clone RP23-54E4 on chromosome 13 Contains the gene for a novel SCAN domain containing C2H2 type zinc finger protein, two novel genes (933017L02Rik, 492150E05Rik), the Skz1 gene for SCAN-KRAB-zinc finger gene 1, a ribosomal protein L29 (Rpl29) pseudogene, the Zfp96 gene for Zinc finger protein 96, the gene for olfactory receptor MOR256-16, the gene for a novel protein similar to plasma glutathione peroxidase Gpx3, the (pseudo)gene for a novel protein similar to ribosomal protein L29 (Rpl29) and the Gpx5 gene for glutathione peroxidase 5 (epididymal androgen-related protein), complete sequence Length = 175880 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 22651 gagagggacagagagagacagaga 22674
>emb|AJ720178.1| Gallus gallus mRNA for hypothetical protein, clone 12b7 Length = 2066 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 gaggaggtgggggcggaggcggcg 60 ||||||||||||| |||||||||| Sbjct: 971 gaggaggtgggggaggaggcggcg 948
>emb|AL844589.3| Mouse DNA sequence from clone RP23-139C9 on chromosome 4, complete sequence Length = 162642 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagaggag 42 ||||| |||||||| ||||||||||||| Sbjct: 63748 gagagagacagagagagacagagaggag 63775
>gb|AC154753.2| Mus musculus BAC clone RP24-404K10 from chromosome 17, complete sequence Length = 168898 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 agagggacagagatagacagagag 39 ||||||||||||||||||| |||| Sbjct: 19991 agagggacagagatagacacagag 20014
>gb|AC153634.3| Mus musculus 6 BAC RP23-368O2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190237 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 acctggagccttttaggaac 459 |||||||||||||||||||| Sbjct: 163721 acctggagccttttaggaac 163702
>gb|AE014173.1| Mus musculus piebald deletion region section 1 of 11 of the complete sequence Length = 400029 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 178489 gagagggacagagagagacagaga 178512
>gb|AC093924.3| Genomic sequence for Mus musculus, clone RP23-239M9, from chromosome 17, complete sequence Length = 166277 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 agagggacagagatagacagagag 39 ||||||||||||| |||||||||| Sbjct: 15438 agagggacagagagagacagagag 15415
>gb|AC093922.5| Genomic sequence for Mus musculus, clone RP23-155E23, from chromosome 17, complete sequence Length = 109929 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 agagggacagagatagacagagag 39 ||||||||||||| |||||||||| Sbjct: 68453 agagggacagagagagacagagag 68430
>gb|AC010325.7| Homo sapiens chromosome 19 clone CTD-2568A17, complete sequence Length = 166439 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 gggacagagatagacagaga 38 |||||||||||||||||||| Sbjct: 12431 gggacagagatagacagaga 12450
>gb|AC080021.3| Genomic sequence for Mus musculus, clone RP23-422L7, complete sequence Length = 200065 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 87046 gagagggacagagagagacagaga 87069
>gb|AC091667.9| Homo sapiens chromosome 10 clone RP11-169K19, complete sequence Length = 144125 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 ctgagagggacagagataga 32 |||||||||||||||||||| Sbjct: 86728 ctgagagggacagagataga 86709
>gb|AC008743.9| Homo sapiens chromosome 19 clone CTD-2560K21, complete sequence Length = 192097 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 gggacagagatagacagaga 38 |||||||||||||||||||| Sbjct: 179411 gggacagagatagacagaga 179430
>gb|AC103706.2| Homo sapiens chromosome 8, clone RP11-629O1, complete sequence Length = 189207 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 8398 gagagggacagagagagacagaga 8375
>gb|AC008133.7| Homo sapiens chromosome 17, clone RP11-40A13, complete sequence Length = 179744 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 ggagacccataagatcgaggcctg 188 |||||||||| ||||||||||||| Sbjct: 164200 ggagacccatcagatcgaggcctg 164223
>gb|AC112031.4| Rattus norvegicus BAC CH230-99K18 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 242158 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 227505 gagagagacagagatagacagaga 227482
>gb|AC025898.10| Homo sapiens chromosome 17, clone RP11-421O15, complete sequence Length = 184875 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 ggagacccataagatcgaggcctg 188 |||||||||| ||||||||||||| Sbjct: 65367 ggagacccatcagatcgaggcctg 65390
>gb|AF154503.1|MMMSAP1 Mus musculus SAP gene, exon 1 Length = 4011 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 896 gagagagacagagatagacagaga 919
>gb|AC069074.11| Mus musculus 10 BAC RP23-243G3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190081 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 169792 gagagggacagagagagacagaga 169815
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 gggggcggaggcggcgccgt 64 |||||||||||||||||||| Sbjct: 4059526 gggggcggaggcggcgccgt 4059545
>dbj|AK042886.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730035C18 product:hypothetical Leucine-rich region containing protein, full insert sequence Length = 1142 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagaggag 42 ||||| |||||||| ||||||||||||| Sbjct: 300 gagagagacagagagagacagagaggag 273
>gb|AC010273.8| Homo sapiens chromosome 5 clone CTC-498J12, complete sequence Length = 144768 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagaggag 42 ||||| |||||||| ||||||||||||| Sbjct: 101884 gagagagacagagagagacagagaggag 101911
>gb|AC116820.11| Mus musculus chromosome 7, clone RP24-358B4, complete sequence Length = 152733 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 96528 gagagagacagagatagacagaga 96505
>emb|AL831716.7| Mouse DNA sequence from clone RP23-280E8 on chromosome X, complete sequence Length = 166068 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 35371 gagagagacagagatagacagaga 35394
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.1 Identities = 74/92 (80%) Strand = Plus / Minus Query: 140 atacctacgcagtccatgtctcctcggagacccataagatcgaggcctggtgcgaatcgg 199 ||||||| |||||||| ||||||| || ||||| | ||| |||||| ||| | ||| | Sbjct: 3670752 atacctattcagtccatatctcctcagaaacccacaggattgaggcccggttggcatctg 3670693 Query: 200 acgaggctttggccaggcaactgcaagaggag 231 | || ||||| || |||||| ||||||||||| Sbjct: 3670692 atgaagctttagctaggcaattgcaagaggag 3670661
>dbj|AB197078.1| Entamoeba histolytica gene for small GTPase EhRabK3, partial cds Length = 844 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aattcagcaatggcagctcc 137 |||||||||||||||||||| Sbjct: 651 aattcagcaatggcagctcc 632
>gb|AC158624.4| Mus musculus BAC RP23-299I16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174188 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 atggcagctcccaataccta 146 |||||||||||||||||||| Sbjct: 18686 atggcagctcccaataccta 18705
>gb|AC155173.3| Mus musculus BAC clone RP23-72O23 from chromosome 5, complete sequence Length = 245443 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagaggag 42 ||||| |||||||| ||||||||||||| Sbjct: 224643 gagagagacagagagagacagagaggag 224616
>gb|AC128693.8| Homo sapiens 3 BAC RP13-563D5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 143617 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 ggaacaaatgtaacttcttc 474 |||||||||||||||||||| Sbjct: 4976 ggaacaaatgtaacttcttc 4995
>gb|AC079044.21| Mus musculus strain C57BL/6J chromosome 16 clone rp23-51l7, complete sequence Length = 228349 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 tcacaattcagcaatggcag 133 |||||||||||||||||||| Sbjct: 2796 tcacaattcagcaatggcag 2815
>gb|AC105969.17| Mus musculus chromosome 15, clone RP23-477B23, complete sequence Length = 189238 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 ||||| |||||||||||||||||| Sbjct: 97062 gagagagacagagatagacagaga 97039
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 agaggaggtgggggcggaggcggc 59 ||||||| |||||||||||||||| Sbjct: 1523873 agaggagctgggggcggaggcggc 1523850
>gb|AC146977.22| Mus musculus chromosome 13, clone RP23-106I12, complete sequence Length = 200131 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 agagggacagagatagacagagag 39 |||| ||||||||||||||||||| Sbjct: 105539 agagagacagagatagacagagag 105516
>emb|BX511205.2|RN120J22 Rattus norvegicus chromosome 1 BAC RP32-120J22, complete sequence Length = 160764 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 agagggacagagatagacagagag 39 |||| ||||||||||||||||||| Sbjct: 43128 agagagacagagatagacagagag 43151
>dbj|BS000233.1| Pan troglodytes chromosome 22 clone:CH251-445J22, map 22, complete sequences Length = 163962 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ttggccaggcaactgcaaga 227 |||||||||||||||||||| Sbjct: 73573 ttggccaggcaactgcaaga 73554
>emb|AL928932.14| Mouse DNA sequence from clone RP24-235B14 on chromosome 4, complete sequence Length = 201761 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 15 gagagggacagagatagacagagaggag 42 ||||| |||||||| ||||||||||||| Sbjct: 27539 gagagagacagagagagacagagaggag 27566
>gb|AC154814.2| Mus musculus BAC clone RP24-532L22 from 16, complete sequence Length = 155332 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagaga 38 |||||||||||||| ||||||||| Sbjct: 117606 gagagggacagagagagacagaga 117583
>gb|AC119196.12| Mus musculus chromosome 7, clone RP24-179I13, complete sequence Length = 165611 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gacagagatagacagagagg 40 |||||||||||||||||||| Sbjct: 95451 gacagagatagacagagagg 95470
>gb|AC005875.2|AC005875 citb_188_b_12, complete sequence Length = 131535 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 cgtctcacaaggcggcaggcaagggaag 111 ||||||||| ||||||||||||| |||| Sbjct: 70787 cgtctcacatggcggcaggcaagagaag 70760
>gb|AC005873.3|AC005873 citb_15_o_21, complete sequence Length = 195653 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctgagagggacagagataga 32 |||||||||||||||||||| Sbjct: 44180 ctgagagggacagagataga 44199
>gb|AC122197.4| Mus musculus BAC clone RP23-55A6 from 10, complete sequence Length = 232763 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 agagggacagagatagacagagag 39 |||| ||||||||||||||||||| Sbjct: 15817 agagagacagagatagacagagag 15840
>gb|AC155284.7| Mus musculus 6 BAC RP23-241L3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205924 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 acctggagccttttaggaac 459 |||||||||||||||||||| Sbjct: 197639 acctggagccttttaggaac 197620
>gb|AC113951.13| Mus musculus chromosome 8, clone RP24-161A21, complete sequence Length = 166298 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagaggag 42 ||||| |||||||| ||||||||||||| Sbjct: 109426 gagagagacagagagagacagagaggag 109399
>emb|AL669881.19| Mouse DNA sequence from clone RP23-161I3 on chromosome 11, complete sequence Length = 143132 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 cacaattcagcaatggcagc 134 |||||||||||||||||||| Sbjct: 92524 cacaattcagcaatggcagc 92505
>emb|CT025735.16| Mouse DNA sequence from clone RP24-338F19 on chromosome 12, complete sequence Length = 165439 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 agagggacagagatagacagagag 39 |||| ||||||||||||||||||| Sbjct: 154505 agagagacagagatagacagagag 154482
>gb|AC129557.10| Mus musculus chromosome 19, clone RP24-245F23, complete sequence Length = 174415 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gacagagatagacagagagg 40 |||||||||||||||||||| Sbjct: 80357 gacagagatagacagagagg 80376
>gb|AC138585.14| Mus musculus chromosome 3, clone RP23-174P13, complete sequence Length = 209896 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagaggag 42 ||||| |||||||| ||||||||||||| Sbjct: 130534 gagagagacagagagagacagagaggag 130507
>gb|AC121101.8| Mus musculus chromosome 8, clone RP24-511A8, complete sequence Length = 158957 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gacagagatagacagagagg 40 |||||||||||||||||||| Sbjct: 82812 gacagagatagacagagagg 82831
>gb|AC174384.2| Gallus gallus BAC clone CH261-128H23 from chromosome ul, complete sequence Length = 206900 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 gaggaggtgggggcggaggcggcg 60 ||||||||||||| |||||||||| Sbjct: 98120 gaggaggtgggggaggaggcggcg 98143
>gb|AC165412.3| Mus musculus chromosome 3, clone RP24-161M18, complete sequence Length = 176496 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 gagagggacagagatagacagagaggag 42 ||||| |||||||| ||||||||||||| Sbjct: 14626 gagagagacagagagagacagagaggag 14599
>gb|AC153584.5| Mus musculus 6 BAC RP23-27C9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208921 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gagggacagagatagacaga 36 |||||||||||||||||||| Sbjct: 108487 gagggacagagatagacaga 108506
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.1 Identities = 74/92 (80%) Strand = Plus / Minus Query: 140 atacctacgcagtccatgtctcctcggagacccataagatcgaggcctggtgcgaatcgg 199 ||||||| |||||||| ||||||| || ||||| | ||| |||||| ||| | ||| | Sbjct: 3670726 atacctattcagtccatatctcctcagaaacccacaggattgaggcccggttggcatctg 3670667 Query: 200 acgaggctttggccaggcaactgcaagaggag 231 | || ||||| || |||||| ||||||||||| Sbjct: 3670666 atgaagctttagctaggcaattgcaagaggag 3670635
>emb|AL713933.6|CNS07YPE Oryza sativa chromosome 12, . BAC OJ1041_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104421 Score = 40.1 bits (20), Expect = 8.1 Identities = 74/92 (80%) Strand = Plus / Plus Query: 140 atacctacgcagtccatgtctcctcggagacccataagatcgaggcctggtgcgaatcgg 199 ||||||| |||||||| ||||||| || ||||| | ||| |||||| ||| | ||| | Sbjct: 78921 atacctattcagtccatatctcctcagaaacccacaggattgaggcccggttggcatctg 78980 Query: 200 acgaggctttggccaggcaactgcaagaggag 231 | || ||||| || |||||| ||||||||||| Sbjct: 78981 atgaagctttagctaggcaattgcaagaggag 79012 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,141,242 Number of Sequences: 3902068 Number of extensions: 5141242 Number of successful extensions: 104081 Number of sequences better than 10.0: 270 Number of HSP's better than 10.0 without gapping: 270 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 102861 Number of HSP's gapped (non-prelim): 1221 length of query: 596 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 573 effective length of database: 17,143,297,704 effective search space: 9823109584392 effective search space used: 9823109584392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
