ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart55b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 58 3e-05
2gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 geno... 58 3e-05
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
4ref|NM_186256.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
5ref|XM_476609.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
7dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
8dbj|AK108823.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
9ref|NM_186254.2| Oryza sativa (japonica cultivar-group), mRNA 50 0.008
10dbj|AK108897.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
11emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome... 44 0.50
12emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 44 0.50
13gb|U18082.1|SPU18082 Streptomyces peucetius daunorubicin and dox... 44 0.50
14gb|U09844.1|SPU09844 Streptomyces peucetius caesius aklavinone C... 44 0.50
15ref|XM_468118.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.0
16ref|NM_195286.1| Oryza sativa (japonica cultivar-group) putative... 42 2.0
17gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 2.0
18gb|AC097278.6| Oryza sativa chromosome 10 BAC OSJNBa0040E17 geno... 42 2.0
19gb|L77912.1|MZEPAL Zea mays phenylalanine ammonia-lyase mRNA, co... 42 2.0
20dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
21dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
22dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
23dbj|AP003613.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
24dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
25gb|AF065769.1|AF065769 Stealth virus 1 clone 3B417 T3 42 2.0
26gb|AY103647.1| Zea mays PCO142084 mRNA sequence 42 2.0
27gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
28gb|U27613.1|SVU27613 Stealth virus 1 clone 3B310T3 42 2.0
29gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome 40 7.8
30ref|XM_514985.1| PREDICTED: Pan troglodytes armadillo repeat pro... 40 7.8
31ref|NM_197283.1| Oryza sativa (japonica cultivar-group) putative... 40 7.8
32gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
33gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome 40 7.8
34gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genom... 40 7.8
35gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 7.8
36gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 7.8
37gb|AC093693.4| Homo sapiens BAC clone RP11-761E14 from 7, comple... 40 7.8
38gb|AC145985.2| Pan troglodytes BAC clone RP43-17I24 from 7, comp... 40 7.8
39ref|NM_001670.1| Homo sapiens armadillo repeat gene deletes in v... 40 7.8
40emb|AL445310.9| Human DNA sequence from clone RP11-61P11 on chro... 40 7.8
41emb|BX029397.1|CNS08UUH Single read from an extremity of a full-... 40 7.8
42emb|X62276.1|AVNANH A.viscosus nanH gene for sialidase 40 7.8
43emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genom... 40 7.8
44gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 gen... 40 7.8
45dbj|AK092664.1| Homo sapiens cDNA FLJ35345 fis, clone PROST20163... 40 7.8
46gb|AF324972.1|AF324972 Drosophila melanica dopa decarboxylase (D... 40 7.8
47emb|BX649559.12| Zebrafish DNA sequence from clone DKEY-33C3 in ... 40 7.8
48gb|AC005663.2| Homo sapiens chromosome 22 clone p888c9 map 22q11... 40 7.8
49gb|AC000074.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 20b ... 40 7.8
50gb|BC053229.1| Danio rerio actin related protein 2/3 complex, su... 40 7.8
51dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
52dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
53gb|AF465237.2| Serratia marcescens YgfF (ygfF), response regulat... 40 7.8
54ref|NM_213156.1| Danio rerio actin related protein 2/3 complex, ... 40 7.8
55dbj|AP005172.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
56dbj|AK105133.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
57dbj|AK070130.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
58dbj|AK060639.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
59gb|AC006239.5|AC006239 Homo sapiens chromosome 9, clone hRPK.467... 40 7.8
60gb|U51269.1|HSU51269 Human armadillo repeat protein mRNA, comple... 40 7.8
61gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
62gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
63emb|AL831795.4|CNS08CA8 Oryza sativa chromosome 12, . BAC OSJNBb... 40 7.8
64emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194... 40 7.8
65gb|L06898.1|ACYSIALID Actinomyces viscosus sialidase (nanH) gene... 40 7.8

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                            
Query: 436      ggtgacgctgccgccgttgccgttggtcccgaatgtgaacgtccctatgccgtttgcggc 495
                |||||||||||||||| ||||||   ||||||  |||||||| || ||||||||   |||
Sbjct: 32124564 ggtgacgctgccgccgatgccgtccatcccgaccgtgaacgtgcccatgccgttccaggc 32124623

                                     
Query: 496      gccgccgccatcagcgtaggc 516
                |||||| ||||| ||||||||
Sbjct: 32124624 gccgcctccatcggcgtaggc 32124644



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 294      tccccaccgtgccgcaggtgaccctgccgccgatgccggccatc 337
                ||||| ||||||||  |||||| ||||||||||||||| |||||
Sbjct: 32124548 tccccgccgtgccggcggtgacgctgccgccgatgccgtccatc 32124591



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 138      gcgcgctcctcctcgccggc 157
                ||||||||||||||||||||
Sbjct: 21350068 gcgcgctcctcctcgccggc 21350087



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>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete
              sequence
          Length = 178158

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                          
Query: 436    ggtgacgctgccgccgttgccgttggtcccgaatgtgaacgtccctatgccgtttgcggc 495
              |||||||||||||||| ||||||   ||||||  |||||||| || ||||||||   |||
Sbjct: 125689 ggtgacgctgccgccgatgccgtccatcccgaccgtgaacgtgcccatgccgttccaggc 125748

                                   
Query: 496    gccgccgccatcagcgtaggc 516
              |||||| ||||| ||||||||
Sbjct: 125749 gccgcctccatcggcgtaggc 125769



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 294    tccccaccgtgccgcaggtgaccctgccgccgatgccggccatc 337
              ||||| ||||||||  |||||| ||||||||||||||| |||||
Sbjct: 125673 tccccgccgtgccggcggtgacgctgccgccgatgccgtccatc 125716



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                            
Query: 436      ggtgacgctgccgccgttgccgttggtcccgaatgtgaacgtccctatgccgtttgcggc 495
                |||||||||||||||| ||||||   ||||||  |||||||| || ||||||||   |||
Sbjct: 32215076 ggtgacgctgccgccgatgccgtccatcccgaccgtgaacgtgcccatgccgttccaggc 32215135

                                     
Query: 496      gccgccgccatcagcgtaggc 516
                |||||| ||||| ||||||||
Sbjct: 32215136 gccgcctccatcggcgtaggc 32215156



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 294      tccccaccgtgccgcaggtgaccctgccgccgatgccggccatc 337
                ||||| ||||||||  |||||| ||||||||||||||| |||||
Sbjct: 32215060 tccccgccgtgccggcggtgacgctgccgccgatgccgtccatc 32215103



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 138      gcgcgctcctcctcgccggc 157
                ||||||||||||||||||||
Sbjct: 21343097 gcgcgctcctcctcgccggc 21343116



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>ref|NM_186256.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 507

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 427 cgtgcccaaggtgacgctgccgccgttgcc 456
           ||||||||||||||||||||||||| ||||
Sbjct: 435 cgtgcccaaggtgacgctgccgccgatgcc 464



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 427 cgtgcccaaggtgacgctgccgccgttgccgt 458
           |||||| |||||||||||||||||| ||||||
Sbjct: 393 cgtgccgaaggtgacgctgccgccgatgccgt 424



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 300 ccgtgccgcaggtgaccctgccgccgatgccg 331
           |||||||| ||||||| |||||||||||||||
Sbjct: 392 ccgtgccgaaggtgacgctgccgccgatgccg 423



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 427 cgtgcccaaggtgacgctgccgccgttgcc 456
           ||||||||||||| ||||||||||| ||||
Sbjct: 249 cgtgcccaaggtggcgctgccgccgatgcc 278



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 313 gaccctgccgccgatgccggc 333
           |||||||||||||||||||||
Sbjct: 186 gaccctgccgccgatgccggc 206



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>ref|XM_476609.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 858

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 427 cgtgcccaaggtgacgctgccgccgttgcc 456
           ||||||||||||||||||||||||| ||||
Sbjct: 562 cgtgcccaaggtgacgctgccgccgatgcc 591



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 427 cgtgcccaaggtgacgctgccgccgttgccgt 458
           |||||| |||||||||||||||||| ||||||
Sbjct: 520 cgtgccgaaggtgacgctgccgccgatgccgt 551



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 300 ccgtgccgcaggtgaccctgccgccgatgccg 331
           |||||||| ||||||| |||||||||||||||
Sbjct: 519 ccgtgccgaaggtgacgctgccgccgatgccg 550



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                             
Query: 427     cgtgcccaaggtgacgctgccgccgttgcc 456
               ||||||||||||||||||||||||| ||||
Sbjct: 2214484 cgtgcccaaggtgacgctgccgccgatgcc 2214513



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                             
Query: 427     cgtgcccaaggtgacgctgccgccgttgcc 456
               ||||||||||||||||||||||||| ||||
Sbjct: 2212349 cgtgcccaaggtgacgctgccgccgatgcc 2212378



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                            
Query: 428     gtgcccaaggtgacgctgccgccgttgcc 456
               |||||||||||||||||||||||| ||||
Sbjct: 2209483 gtgcccaaggtgacgctgccgccgatgcc 2209511



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 427     cgtgcccaaggtgacgctgccgccgttgccgt 458
               |||||| |||||||||||||||||| ||||||
Sbjct: 2214442 cgtgccgaaggtgacgctgccgccgatgccgt 2214473



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 300     ccgtgccgcaggtgaccctgccgccgatgccg 331
               |||||||| ||||||| |||||||||||||||
Sbjct: 2214441 ccgtgccgaaggtgacgctgccgccgatgccg 2214472



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 427     cgtgcccaaggtgacgctgccgccgttgccgt 458
               |||||| |||||||||||||||||| ||||||
Sbjct: 2212307 cgtgccgaaggtgacgctgccgccgatgccgt 2212338



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 300     ccgtgccgcaggtgaccctgccgccgatgccg 331
               |||||||| ||||||| |||||||||||||||
Sbjct: 2212306 ccgtgccgaaggtgacgctgccgccgatgccg 2212337



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 427     cgtgcccaaggtgacgctgccgccgttgccgt 458
               |||||| |||||||||||||||||| ||||||
Sbjct: 2209440 cgtgccgaaggtgacgctgccgccgatgccgt 2209471



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 300     ccgtgccgcaggtgaccctgccgccgatgccg 331
               |||||||| ||||||| |||||||||||||||
Sbjct: 2209439 ccgtgccgaaggtgacgctgccgccgatgccg 2209470



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 427     cgtgcccaaggtgacgctgccgccgttgcc 456
               ||||||||||||| ||||||||||| ||||
Sbjct: 2214298 cgtgcccaaggtggcgctgccgccgatgcc 2214327



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 313     gaccctgccgccgatgccggc 333
               |||||||||||||||||||||
Sbjct: 2214235 gaccctgccgccgatgccggc 2214255



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 441      cgctgccgccgttgccgttg 460
                ||||||||||||||||||||
Sbjct: 10087527 cgctgccgccgttgccgttg 10087508



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>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1351_C05
          Length = 112465

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 427   cgtgcccaaggtgacgctgccgccgttgcc 456
             ||||||||||||||||||||||||| ||||
Sbjct: 82386 cgtgcccaaggtgacgctgccgccgatgcc 82415



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 427   cgtgcccaaggtgacgctgccgccgttgcc 456
             ||||||||||||||||||||||||| ||||
Sbjct: 80251 cgtgcccaaggtgacgctgccgccgatgcc 80280



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 428   gtgcccaaggtgacgctgccgccgttgcc 456
             |||||||||||||||||||||||| ||||
Sbjct: 77385 gtgcccaaggtgacgctgccgccgatgcc 77413



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 427   cgtgcccaaggtgacgctgccgccgttgccgt 458
             |||||| |||||||||||||||||| ||||||
Sbjct: 82344 cgtgccgaaggtgacgctgccgccgatgccgt 82375



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 300   ccgtgccgcaggtgaccctgccgccgatgccg 331
             |||||||| ||||||| |||||||||||||||
Sbjct: 82343 ccgtgccgaaggtgacgctgccgccgatgccg 82374



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 427   cgtgcccaaggtgacgctgccgccgttgccgt 458
             |||||| |||||||||||||||||| ||||||
Sbjct: 80209 cgtgccgaaggtgacgctgccgccgatgccgt 80240



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 300   ccgtgccgcaggtgaccctgccgccgatgccg 331
             |||||||| ||||||| |||||||||||||||
Sbjct: 80208 ccgtgccgaaggtgacgctgccgccgatgccg 80239



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 427   cgtgcccaaggtgacgctgccgccgttgccgt 458
             |||||| |||||||||||||||||| ||||||
Sbjct: 77342 cgtgccgaaggtgacgctgccgccgatgccgt 77373



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 300   ccgtgccgcaggtgaccctgccgccgatgccg 331
             |||||||| ||||||| |||||||||||||||
Sbjct: 77341 ccgtgccgaaggtgacgctgccgccgatgccg 77372



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 427   cgtgcccaaggtgacgctgccgccgttgcc 456
             ||||||||||||| ||||||||||| ||||
Sbjct: 82200 cgtgcccaaggtggcgctgccgccgatgcc 82229



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 313   gaccctgccgccgatgccggc 333
             |||||||||||||||||||||
Sbjct: 82137 gaccctgccgccgatgccggc 82157



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>dbj|AK108823.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-F04, full
           insert sequence
          Length = 858

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 427 cgtgcccaaggtgacgctgccgccgttgcc 456
           ||||||||||||||||||||||||| ||||
Sbjct: 562 cgtgcccaaggtgacgctgccgccgatgcc 591



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 427 cgtgcccaaggtgacgctgccgccgttgccgt 458
           |||||| |||||||||||||||||| ||||||
Sbjct: 520 cgtgccgaaggtgacgctgccgccgatgccgt 551



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 300 ccgtgccgcaggtgaccctgccgccgatgccg 331
           |||||||| ||||||| |||||||||||||||
Sbjct: 519 ccgtgccgaaggtgacgctgccgccgatgccg 550



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>ref|NM_186254.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 817

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 428 gtgcccaaggtgacgctgccgccgttgcc 456
           |||||||||||||||||||||||| ||||
Sbjct: 508 gtgcccaaggtgacgctgccgccgatgcc 536



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 427 cgtgcccaaggtgacgctgccgccgttgccgt 458
           |||||| |||||||||||||||||| ||||||
Sbjct: 465 cgtgccgaaggtgacgctgccgccgatgccgt 496



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 300 ccgtgccgcaggtgaccctgccgccgatgccg 331
           |||||||| ||||||| |||||||||||||||
Sbjct: 464 ccgtgccgaaggtgacgctgccgccgatgccg 495



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>dbj|AK108897.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-F01, full
           insert sequence
          Length = 817

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 428 gtgcccaaggtgacgctgccgccgttgcc 456
           |||||||||||||||||||||||| ||||
Sbjct: 508 gtgcccaaggtgacgctgccgccgatgcc 536



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 427 cgtgcccaaggtgacgctgccgccgttgccgt 458
           |||||| |||||||||||||||||| ||||||
Sbjct: 465 cgtgccgaaggtgacgctgccgccgatgccgt 496



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 300 ccgtgccgcaggtgaccctgccgccgatgccg 331
           |||||||| ||||||| |||||||||||||||
Sbjct: 464 ccgtgccgaaggtgacgctgccgccgatgccg 495



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>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13
          Length = 349606

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 441    cgctgccgccgttgccgttggt 462
              ||||||||||||||||||||||
Sbjct: 132782 cgctgccgccgttgccgttggt 132761



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 441    cgctgccgccgttgccgttggt 462
              ||||||||||||||||||||||
Sbjct: 132182 cgctgccgccgttgccgttggt 132161



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>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14
          Length = 316050

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 441    cgctgccgccgttgccgttggt 462
              ||||||||||||||||||||||
Sbjct: 142174 cgctgccgccgttgccgttggt 142153



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>gb|U18082.1|SPU18082 Streptomyces peucetius daunorubicin and doxorubicin resistance
            determinant (drrAB) gene, partial cds, and aklavinone
            C-11 hydroxylase (dnrF) gene, complete cds
          Length = 2201

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 349  ggcggtgttgccgcccatgccc 370
            ||||||||||||||||||||||
Sbjct: 1323 ggcggtgttgccgcccatgccc 1302



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>gb|U09844.1|SPU09844 Streptomyces peucetius caesius aklavinone C-11 hydroxylase (dnrF)
            gene, complete cds
          Length = 2200

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 349  ggcggtgttgccgcccatgccc 370
            ||||||||||||||||||||||
Sbjct: 1322 ggcggtgttgccgcccatgccc 1301



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>ref|XM_468118.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1920

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 400 gacgatggcgccgatgcccgc 420
           |||||||||||||||||||||
Sbjct: 115 gacgatggcgccgatgcccgc 135



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>ref|NM_195286.1| Oryza sativa (japonica cultivar-group) putative proline-rich cell
           wall protein (OSJNBa0040E17.25), mRNA
          Length = 657

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 315 ccctgccgccgatgccggccatcgt 339
           ||||||||||||| |||||||||||
Sbjct: 314 ccctgccgccgatcccggccatcgt 338



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 319 gccgccgatgccggccatcgtcgt 342
           ||||||| ||||||||||||||||
Sbjct: 246 gccgccgctgccggccatcgtcgt 269



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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 362     cccatgcccaaggtcaccctc 382
               |||||||||||||||||||||
Sbjct: 3314500 cccatgcccaaggtcaccctc 3314480



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>gb|AC097278.6| Oryza sativa chromosome 10 BAC OSJNBa0040E17 genomic sequence, complete
              sequence
          Length = 151673

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 315    ccctgccgccgatgccggccatcgt 339
              ||||||||||||| |||||||||||
Sbjct: 109034 ccctgccgccgatcccggccatcgt 109058



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 319    gccgccgatgccggccatcgtcgt 342
              ||||||| ||||||||||||||||
Sbjct: 108966 gccgccgctgccggccatcgtcgt 108989



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>gb|L77912.1|MZEPAL Zea mays phenylalanine ammonia-lyase mRNA, complete cds
          Length = 2488

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 401 acgatggcgccgatgcccgccattg 425
           |||||||||||| ||||||||||||
Sbjct: 136 acgatggcgccgttgcccgccattg 112



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 315     ccctgccgccgatgccggccatcgt 339
               ||||||||||||| |||||||||||
Sbjct: 5957279 ccctgccgccgatcccggccatcgt 5957255



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 491      gcggcgccgccgccatcagc 510
                ||||||||||||||||||||
Sbjct: 19013007 gcggcgccgccgccatcagc 19012988



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 319     gccgccgatgccggccatcgtcgt 342
               ||||||| ||||||||||||||||
Sbjct: 5957347 gccgccgctgccggccatcgtcgt 5957324



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 445      gccgccgttgccgttggtccc 465
                |||||||||||||||||||||
Sbjct: 20860611 gccgccgttgccgttggtccc 20860591



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 400      gacgatggcgccgatgcccgc 420
                |||||||||||||||||||||
Sbjct: 33156663 gacgatggcgccgatgcccgc 33156683



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>dbj|AP003613.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0458E11
          Length = 148798

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 445    gccgccgttgccgttggtccc 465
              |||||||||||||||||||||
Sbjct: 115286 gccgccgttgccgttggtccc 115266



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>dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1369_G08
          Length = 104190

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 400   gacgatggcgccgatgcccgc 420
             |||||||||||||||||||||
Sbjct: 72323 gacgatggcgccgatgcccgc 72343



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>gb|AF065769.1|AF065769 Stealth virus 1 clone 3B417 T3
          Length = 795

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 441 cgctgccgccgttgccgttgg 461
           |||||||||||||||||||||
Sbjct: 517 cgctgccgccgttgccgttgg 497



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>gb|AY103647.1| Zea mays PCO142084 mRNA sequence
          Length = 2598

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 401 acgatggcgccgatgcccgccattg 425
           |||||||||||| ||||||||||||
Sbjct: 132 acgatggcgccgttgcccgccattg 108



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 315     ccctgccgccgatgccggccatcgt 339
               ||||||||||||| |||||||||||
Sbjct: 5958465 ccctgccgccgatcccggccatcgt 5958441



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 491      gcggcgccgccgccatcagc 510
                ||||||||||||||||||||
Sbjct: 19024261 gcggcgccgccgccatcagc 19024242



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 319     gccgccgatgccggccatcgtcgt 342
               ||||||| ||||||||||||||||
Sbjct: 5958533 gccgccgctgccggccatcgtcgt 5958510



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>gb|U27613.1|SVU27613 Stealth virus 1 clone 3B310T3
          Length = 672

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 441 cgctgccgccgttgccgttgg 461
           |||||||||||||||||||||
Sbjct: 518 cgctgccgccgttgccgttgg 498



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>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 310    ggtgaccctgccgccgatgccggc 333
              ||||| ||||||||||||||||||
Sbjct: 426631 ggtgatcctgccgccgatgccggc 426654



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>ref|XM_514985.1| PREDICTED: Pan troglodytes armadillo repeat protein (LOC458656), mRNA
          Length = 1633

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 156  gcagcacgtgtgacgccgcc 175
            ||||||||||||||||||||
Sbjct: 1229 gcagcacgtgtgacgccgcc 1210



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>ref|NM_197283.1| Oryza sativa (japonica cultivar-group) putative stress-responsive
           protein (OSJNBb0091N21.27), mRNA
          Length = 890

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 491 gcggcgccgccgccatcagc 510
           ||||||||||||||||||||
Sbjct: 133 gcggcgccgccgccatcagc 152



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>gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0058P12,
              complete sequence
          Length = 173073

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 134    gcgtgcgcgctcctcctcgccggc 157
              |||| |||||||||||||||||||
Sbjct: 105570 gcgtccgcgctcctcctcgccggc 105547



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>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 310    ggtgaccctgccgccgatgccggc 333
              ||||| ||||||||||||||||||
Sbjct: 426443 ggtgatcctgccgccgatgccggc 426466



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>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete
             sequence
          Length = 190055

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   gcgcgctcctcctcgccggc 157
             ||||||||||||||||||||
Sbjct: 42979 gcgcgctcctcctcgccggc 42998



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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 301     cgtgccgcaggtgaccctgccgcc 324
               |||||||| |||||||||||||||
Sbjct: 3185490 cgtgccgctggtgaccctgccgcc 3185513



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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 180     acctggccgacacgacaccggagg 203
               |||||||||||||||| |||||||
Sbjct: 2450445 acctggccgacacgacgccggagg 2450468



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>gb|AC093693.4| Homo sapiens BAC clone RP11-761E14 from 7, complete sequence
          Length = 47886

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 374   gtcaccctccccacagtgcc 393
             ||||||||||||||||||||
Sbjct: 22086 gtcaccctccccacagtgcc 22105



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>gb|AC145985.2| Pan troglodytes BAC clone RP43-17I24 from 7, complete sequence
          Length = 162953

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   gtcaccctccccacagtgcc 393
             ||||||||||||||||||||
Sbjct: 74356 gtcaccctccccacagtgcc 74337



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>ref|NM_001670.1| Homo sapiens armadillo repeat gene deletes in velocardiofacial
            syndrome (ARVCF), mRNA
          Length = 4031

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 156  gcagcacgtgtgacgccgcc 175
            ||||||||||||||||||||
Sbjct: 2750 gcagcacgtgtgacgccgcc 2731



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>emb|AL445310.9| Human DNA sequence from clone RP11-61P11 on chromosome 9, complete
             sequence
          Length = 175993

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   caccgtacctggcctgccta 242
             ||||||||||||||||||||
Sbjct: 84370 caccgtacctggcctgccta 84351



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>emb|BX029397.1|CNS08UUH Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA43DG01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 467

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 494 gcgccgccgccatcagcgta 513
           ||||||||||||||||||||
Sbjct: 440 gcgccgccgccatcagcgta 421



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>emb|X62276.1|AVNANH A.viscosus nanH gene for sialidase
          Length = 4512

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  cgctgccgccgttgccgttg 460
            ||||||||||||||||||||
Sbjct: 1802 cgctgccgccgttgccgttg 1783



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>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16
          Length = 348942

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 432  ccaaggtgacgctgccgccg 451
            ||||||||||||||||||||
Sbjct: 1032 ccaaggtgacgctgccgccg 1013



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>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete
             sequence
          Length = 151991

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 491   gcggcgccgccgccatcagc 510
             ||||||||||||||||||||
Sbjct: 65657 gcggcgccgccgccatcagc 65676



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>dbj|AK092664.1| Homo sapiens cDNA FLJ35345 fis, clone PROST2016351, moderately
            similar to P120 PROTEIN
          Length = 2344

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 156  gcagcacgtgtgacgccgcc 175
            ||||||||||||||||||||
Sbjct: 1196 gcagcacgtgtgacgccgcc 1177



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>gb|AF324972.1|AF324972 Drosophila melanica dopa decarboxylase (Ddc) gene, exon 4 and
           partial cds
          Length = 1134

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 423 ttgtcgtgcccaaggtgacg 442
           ||||||||||||||||||||
Sbjct: 538 ttgtcgtgcccaaggtgacg 519



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>emb|BX649559.12| Zebrafish DNA sequence from clone DKEY-33C3 in linkage group 3,
            complete sequence
          Length = 143056

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 387  cagtgccgcaggtgacgatg 406
            ||||||||||||||||||||
Sbjct: 3030 cagtgccgcaggtgacgatg 3049



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>gb|AC005663.2| Homo sapiens chromosome 22 clone p888c9 map 22q11, complete sequence
          Length = 103122

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   gcagcacgtgtgacgccgcc 175
             ||||||||||||||||||||
Sbjct: 26815 gcagcacgtgtgacgccgcc 26834



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>gb|AC000074.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 20b In DGCR Region,
             complete sequence
          Length = 44450

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   gcagcacgtgtgacgccgcc 175
             ||||||||||||||||||||
Sbjct: 10757 gcagcacgtgtgacgccgcc 10776



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>gb|BC053229.1| Danio rerio actin related protein 2/3 complex, subunit 1B, mRNA
           (cDNA clone MGC:64056 IMAGE:6793975), complete cds
          Length = 1594

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 387 cagtgccgcaggtgacgatg 406
           ||||||||||||||||||||
Sbjct: 333 cagtgccgcaggtgacgatg 314



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 444      tgccgccgttgccgttggtc 463
                ||||||||||||||||||||
Sbjct: 10742158 tgccgccgttgccgttggtc 10742139



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 134     gcgtgcgcgctcctcctcgccggc 157
               |||| |||||||||||||||||||
Sbjct: 4889323 gcgtccgcgctcctcctcgccggc 4889346



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>gb|AF465237.2| Serratia marcescens YgfF (ygfF), response regulator protein RssB
            (rssB), and sensor protein RssA (rssA) genes, complete
            cds
          Length = 3451

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 172  cgcccgcaacctggccgaca 191
            ||||||||||||||||||||
Sbjct: 3236 cgcccgcaacctggccgaca 3255



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>ref|NM_213156.1| Danio rerio actin related protein 2/3 complex, subunit 1B (arpc1b),
           mRNA
          Length = 1594

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 387 cagtgccgcaggtgacgatg 406
           ||||||||||||||||||||
Sbjct: 333 cagtgccgcaggtgacgatg 314



to top

>dbj|AP005172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0002J01
          Length = 130152

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 441   cgctgccgccgttgccgttg 460
             ||||||||||||||||||||
Sbjct: 60203 cgctgccgccgttgccgttg 60184



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>dbj|AK105133.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-H11, full
           insert sequence
          Length = 642

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 138 gcgcgctcctcctcgccggc 157
           ||||||||||||||||||||
Sbjct: 213 gcgcgctcctcctcgccggc 232



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>dbj|AK070130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046C06, full
           insert sequence
          Length = 3171

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 134 gcgtgcgcgctcctcctcgccggc 157
           |||| |||||||||||||||||||
Sbjct: 238 gcgtccgcgctcctcctcgccggc 261



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>dbj|AK060639.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-D09, full
           insert sequence
          Length = 1229

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 491 gcggcgccgccgccatcagc 510
           ||||||||||||||||||||
Sbjct: 146 gcggcgccgccgccatcagc 165



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>gb|AC006239.5|AC006239 Homo sapiens chromosome 9, clone hRPK.467_F_21, complete sequence
          Length = 195032

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    caccgtacctggcctgccta 242
              ||||||||||||||||||||
Sbjct: 152063 caccgtacctggcctgccta 152082



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>gb|U51269.1|HSU51269 Human armadillo repeat protein mRNA, complete cds
          Length = 4031

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 156  gcagcacgtgtgacgccgcc 175
            ||||||||||||||||||||
Sbjct: 2750 gcagcacgtgtgacgccgcc 2731



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 134     gcgtgcgcgctcctcctcgccggc 157
               |||| |||||||||||||||||||
Sbjct: 4908107 gcgtccgcgctcctcctcgccggc 4908130



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 444      tgccgccgttgccgttggtc 463
                ||||||||||||||||||||
Sbjct: 10741857 tgccgccgttgccgttggtc 10741838



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>emb|AL831795.4|CNS08CA8 Oryza sativa chromosome 12, . BAC OSJNBb0085N21 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 135105

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 444    tgccgccgttgccgttggtc 463
              ||||||||||||||||||||
Sbjct: 107005 tgccgccgttgccgttggtc 106986



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>emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194_E11 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 119388

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 444  tgccgccgttgccgttggtc 463
            ||||||||||||||||||||
Sbjct: 8507 tgccgccgttgccgttggtc 8488



to top

>gb|L06898.1|ACYSIALID Actinomyces viscosus sialidase (nanH) gene, complete cds
          Length = 4284

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  cgctgccgccgttgccgttg 460
            ||||||||||||||||||||
Sbjct: 1393 cgctgccgccgttgccgttg 1374


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,432,010
Number of Sequences: 3902068
Number of extensions: 3432010
Number of successful extensions: 78870
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77240
Number of HSP's gapped (non-prelim): 1626
length of query: 572
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 549
effective length of database: 17,143,297,704
effective search space: 9411670439496
effective search space used: 9411670439496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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