Clone Name | bart55a04 |
---|---|
Clone Library Name | barley_pub |
>emb|Z22874.1|TABETGLUB T.aestivum (1,3;1,4) beta glucanase mRNA, complete CDS Length = 1426 Score = 377 bits (190), Expect = e-101 Identities = 223/234 (95%) Strand = Plus / Plus Query: 24 caacgcagctagagagagaaagagaatggcaggccaaggcgttgcctccatgttggctct 83 ||||||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||| Sbjct: 26 caacgcagctagagagacaaagagaatggcgagccaaggtgttgcctccatgttcgctct 85 Query: 84 ggcattgctcctcggagccttcgcctccatcccacaaagcgtggagtccatcggggtgtg 143 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 86 ggcattgctcctcggagccttcgcctccatcccacaaagcgtcgagtccatcggggtgtg 145 Query: 144 ctacggcatgagcgccaacaatctgccggcggcgagcaccgtggtcaacatgttcaagtc 203 ||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 146 ctacggcatgagcgccaacaacctgccggcggcgagcaccgtcgtcagcatgttcaagtc 205 Query: 204 caacgggatcaactccatgcggctgtacgctcccgagcaggcggcgctgcaggc 257 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 206 caacggcatcaactccatgcggctgtacgctcccgaccaggcggcgctgcaggc 259
>gb|BC032056.1| Homo sapiens, clone IMAGE:5193698, mRNA Length = 363 Score = 377 bits (190), Expect = e-101 Identities = 223/234 (95%) Strand = Plus / Plus Query: 24 caacgcagctagagagagaaagagaatggcaggccaaggcgttgcctccatgttggctct 83 ||||||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||| Sbjct: 54 caacgcagctagagagacaaagagaatggcgagccaaggtgttgcctccatgttcgctct 113 Query: 84 ggcattgctcctcggagccttcgcctccatcccacaaagcgtggagtccatcggggtgtg 143 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 114 ggcattgctcctcggagccttcgcctccatcccacaaagcgtcgagtccatcggggtgtg 173 Query: 144 ctacggcatgagcgccaacaatctgccggcggcgagcaccgtggtcaacatgttcaagtc 203 ||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 174 ctacggcatgagcgccaacaacctgccggcggcgagcaccgtcgtcagcatgttcaagtc 233 Query: 204 caacgggatcaactccatgcggctgtacgctcccgagcaggcggcgctgcaggc 257 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 234 caacggcatcaactccatgcggctgtacgctcccgaccaggcggcgctgcaggc 287
>gb|BC028338.1| Homo sapiens, clone IMAGE:5195357, mRNA Length = 363 Score = 337 bits (170), Expect = 1e-89 Identities = 209/222 (94%) Strand = Plus / Plus Query: 36 agagagaaagagaatggcaggccaaggcgttgcctccatgttggctctggcattgctcct 95 |||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||| Sbjct: 58 agagagaaagagaatggcgagccaaggcgttgcctccatgttcgctctcgcattgctcct 117 Query: 96 cggagccttcgcctccatcccacaaagcgtggagtccatcggggtgtgctacggcatgag 155 ||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 118 cggggccttcgcctccatcccacaaagcgtcgagtccatcggagtgtgctacggcatgag 177 Query: 156 cgccaacaatctgccggcggcgagcaccgtggtcaacatgttcaagtccaacgggatcaa 215 ||||||||| |||||||||||||||||||| |||| |||||||||||||||||| ||||| Sbjct: 178 cgccaacaacctgccggcggcgagcaccgtcgtcagcatgttcaagtccaacggcatcaa 237 Query: 216 ctccatgcggctgtacgctcccgagcaggcggcgctgcaggc 257 |||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 238 ctccatgcggctgtacgcccccgaccaggcggcgctgcaggc 279
>gb|DQ294235.1| Triticum aestivum (1,3;1,4) beta-glucanase mRNA, partial cds Length = 913 Score = 307 bits (155), Expect = 9e-81 Identities = 173/179 (96%) Strand = Plus / Plus Query: 79 gctctggcattgctcctcggagccttcgcctccatcccacaaagcgtggagtccatcggg 138 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5 gctctggcattgctcctcggagccttcgcctccatcccacaaagcgtcgagtccatcggg 64 Query: 139 gtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgtggtcaacatgttc 198 |||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||| Sbjct: 65 gtgtgctacggcatgagcgccaacaacctgccggcggcgagcaccgtcgtcagcatgttc 124 Query: 199 aagtccaacgggatcaactccatgcggctgtacgctcccgagcaggcggcgctgcaggc 257 ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 125 aagtccaacggcatcaactccatgcggctgtacgctcccgaccaggcggcgctgcaggc 183
>emb|Z15131.1|ASBGLUCAN A.sativa mRNA for beta glucanase Length = 1448 Score = 297 bits (150), Expect = 9e-78 Identities = 189/202 (93%) Strand = Plus / Plus Query: 56 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 115 ||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 35 gccaaggtgttgcctccatgttcgctctcgcattgctcctcggagccttcgcctccatcc 94 Query: 116 cacaaagcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcgg 175 |||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||| Sbjct: 95 cacaaagcgtggagtccatcggcgtttgctacggcatgagcgccaacaacctgccggcgg 154 Query: 176 cgagcaccgtggtcaacatgttcaagtccaacgggatcaactccatgcggctgtacgctc 235 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct: 155 cgagcaccgtggtgggcatgttcaagtccaacgggatcaactccatgcggctgtacgcgc 214 Query: 236 ccgagcaggcggcgctgcaggc 257 | || ||||||||||| ||||| Sbjct: 215 cggaccaggcggcgcttcaggc 236
>emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanase (EC 3.2.1.73) Length = 6260 Score = 266 bits (134), Expect = 3e-68 Identities = 137/138 (99%) Strand = Plus / Plus Query: 122 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4540 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 4599 Query: 182 ccgtggtcaacatgttcaagtccaacgggatcaactccatgcggctgtacgctcccgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4600 ccgtggtcaacatgttcaagtccaacgggatcaactccatgcggctgtacgctcccgacc 4659 Query: 242 aggcggcgctgcaggcgg 259 |||||||||||||||||| Sbjct: 4660 aggcggcgctgcaggcgg 4677 Score = 242 bits (122), Expect = 5e-61 Identities = 122/122 (100%) Strand = Plus / Plus Query: 1 cacccacccacaccctcaccctccaacgcagctagagagagaaagagaatggcaggccaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1929 cacccacccacaccctcaccctccaacgcagctagagagagaaagagaatggcaggccaa 1988 Query: 61 ggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1989 ggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaa 2048 Query: 121 ag 122 || Sbjct: 2049 ag 2050
>emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D-glucanase Length = 4849 Score = 266 bits (134), Expect = 3e-68 Identities = 137/138 (99%) Strand = Plus / Plus Query: 122 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3533 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 3592 Query: 182 ccgtggtcaacatgttcaagtccaacgggatcaactccatgcggctgtacgctcccgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3593 ccgtggtcaacatgttcaagtccaacgggatcaactccatgcggctgtacgctcccgacc 3652 Query: 242 aggcggcgctgcaggcgg 259 |||||||||||||||||| Sbjct: 3653 aggcggcgctgcaggcgg 3670 Score = 242 bits (122), Expect = 5e-61 Identities = 122/122 (100%) Strand = Plus / Plus Query: 1 cacccacccacaccctcaccctccaacgcagctagagagagaaagagaatggcaggccaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 907 cacccacccacaccctcaccctccaacgcagctagagagagaaagagaatggcaggccaa 966 Query: 61 ggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 967 ggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaa 1026 Query: 121 ag 122 || Sbjct: 1027 ag 1028
>emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucanase.(EC number 3.2.1.73) Length = 4643 Score = 266 bits (134), Expect = 3e-68 Identities = 137/138 (99%) Strand = Plus / Plus Query: 122 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3133 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 3192 Query: 182 ccgtggtcaacatgttcaagtccaacgggatcaactccatgcggctgtacgctcccgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3193 ccgtggtcaacatgttcaagtccaacgggatcaactccatgcggctgtacgctcccgacc 3252 Query: 242 aggcggcgctgcaggcgg 259 |||||||||||||||||| Sbjct: 3253 aggcggcgctgcaggcgg 3270 Score = 242 bits (122), Expect = 5e-61 Identities = 122/122 (100%) Strand = Plus / Plus Query: 1 cacccacccacaccctcaccctccaacgcagctagagagagaaagagaatggcaggccaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 498 cacccacccacaccctcaccctccaacgcagctagagagagaaagagaatggcaggccaa 557 Query: 61 ggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 ggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaa 617 Query: 121 ag 122 || Sbjct: 618 ag 619
>gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-glucanohydrolase (Glb 2) gene, intron 1 Length = 5159 Score = 198 bits (100), Expect = 6e-48 Identities = 127/136 (93%) Strand = Plus / Plus Query: 122 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 181 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4061 gcgtggagtcgatcggggtgtgctacggcatgagcgccaacaacctgccggcggcgagca 4120 Query: 182 ccgtggtcaacatgttcaagtccaacgggatcaactccatgcggctgtacgctcccgagc 241 |||| || | |||||||||||||||||||||||| || |||||||||||||||||| | | Sbjct: 4121 ccgtcgtgagcatgttcaagtccaacgggatcaaatcgatgcggctgtacgctcccaacc 4180 Query: 242 aggcggcgctgcaggc 257 |||||||||||||||| Sbjct: 4181 aggcggcgctgcaggc 4196 Score = 77.8 bits (39), Expect = 2e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 56 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 115 |||||||||||||||||||||| |||| |||||||| |||||||||||||| || |||| Sbjct: 1043 gccaaggcgttgcctccatgttcactctcgcattgcttctcggagccttcgcgtctatcc 1102 Query: 116 cac 118 ||| Sbjct: 1103 cac 1105
>gb|M13237.1|BLYGLUCB Barley beta glucanase mRNA Length = 874 Score = 196 bits (99), Expect = 2e-47 Identities = 132/143 (92%) Strand = Plus / Plus Query: 115 ccacaaagcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcg 174 |||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1 ccaccaagcgtggagtcgatcggggtgtgctacggcatgagcgccaacaacctgccggcg 60 Query: 175 gcgagcaccgtggtcaacatgttcaagtccaacgggatcaactccatgcggctgtacgct 234 ||||||||||| || | ||||||||||| |||||||||||| || ||||||||||||||| Sbjct: 61 gcgagcaccgtcgtgagcatgttcaagttcaacgggatcaaatcgatgcggctgtacgct 120 Query: 235 cccgagcaggcggcgctgcaggc 257 ||| | ||||||||||||||||| Sbjct: 121 cccaaccaggcggcgctgcaggc 143
>emb|Z22873.1|TABETGLUA T.aestivum beta glucanase mRNA, complete CDS Length = 1434 Score = 190 bits (96), Expect = 2e-45 Identities = 126/136 (92%) Strand = Plus / Plus Query: 122 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 181 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 110 gcgtcgagtccatcggggtgtgctacggcatgagcgccaacaacctgccggcggcgagca 169 Query: 182 ccgtggtcaacatgttcaagtccaacgggatcaactccatgcggctgtacgctcccgagc 241 |||| || | |||||||||||||||||| ||||||||||||||||| || || ||||| | Sbjct: 170 ccgtcgtgagcatgttcaagtccaacggtatcaactccatgcggctatatgcccccgacc 229 Query: 242 aggcggcgctgcaggc 257 |||||||||||||||| Sbjct: 230 aggcggcgctgcaggc 245
>ref|XM_475161.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1005 Score = 135 bits (68), Expect = 8e-29 Identities = 167/200 (83%) Strand = Plus / Plus Query: 56 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 115 ||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 8 gccaaggtgtagcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattc 67 Query: 116 cacaaagcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcgg 175 | |||| | |||| | |||||||||||||||||||||||||| ||||| |||||| ||| Sbjct: 68 ctcaaaaggcggaggcgatcggggtgtgctacggcatgagcgcgaacaacctgccgccgg 127 Query: 176 cgagcaccgtggtcaacatgttcaagtccaacgggatcaactccatgcggctgtacgctc 235 ||||| | ||||| |||| | |||||||| |||| || |||||||||||||| | Sbjct: 128 cgagctcggtggtggggatgtaccgctccaacggcatcacgtcgatgcggctgtacgcgc 187 Query: 236 ccgagcaggcggcgctgcag 255 | || ||||||||||||||| Sbjct: 188 cggaccaggcggcgctgcag 207
>gb|AY768944.1| Oryza sativa (japonica cultivar-group) endo-1,3;1,4-beta-glucanase mRNA, complete cds Length = 1579 Score = 135 bits (68), Expect = 8e-29 Identities = 167/200 (83%) Strand = Plus / Plus Query: 56 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 115 ||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 119 gccaaggtgtagcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattc 178 Query: 116 cacaaagcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcgg 175 | |||| | |||| | |||||||||||||||||||||||||| ||||| |||||| ||| Sbjct: 179 ctcaaaaggcggaggcgatcggggtgtgctacggcatgagcgcgaacaacctgccgccgg 238 Query: 176 cgagcaccgtggtcaacatgttcaagtccaacgggatcaactccatgcggctgtacgctc 235 ||||| | ||||| |||| | |||||||| |||| || |||||||||||||| | Sbjct: 239 cgagctcggtggtggggatgtaccgctccaacggcatcacgtcgatgcggctgtacgcgc 298 Query: 236 ccgagcaggcggcgctgcag 255 | || ||||||||||||||| Sbjct: 299 cggaccaggcggcgctgcag 318
>gb|AF323610.1|AF323610 Oryza sativa glucanase (GLU) mRNA, complete cds Length = 1573 Score = 135 bits (68), Expect = 8e-29 Identities = 167/200 (83%) Strand = Plus / Plus Query: 56 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 115 ||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 105 gccaaggtgtagcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattc 164 Query: 116 cacaaagcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcgg 175 | |||| | |||| | |||||||||||||||||||||||||| ||||| |||||| ||| Sbjct: 165 ctcaaaaggcggaggcgatcggggtgtgctacggcatgagcgcgaacaacctgccgccgg 224 Query: 176 cgagcaccgtggtcaacatgttcaagtccaacgggatcaactccatgcggctgtacgctc 235 ||||| | ||||| |||| | |||||||| |||| || |||||||||||||| | Sbjct: 225 cgagctcggtggtggggatgtaccgctccaacggcatcacgtcgatgcggctgtacgcgc 284 Query: 236 ccgagcaggcggcgctgcag 255 | || ||||||||||||||| Sbjct: 285 cggaccaggcggcgctgcag 304
>dbj|AK121825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099G01, full insert sequence Length = 1606 Score = 135 bits (68), Expect = 8e-29 Identities = 167/200 (83%) Strand = Plus / Plus Query: 56 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 115 ||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 139 gccaaggtgtagcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattc 198 Query: 116 cacaaagcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcgg 175 | |||| | |||| | |||||||||||||||||||||||||| ||||| |||||| ||| Sbjct: 199 ctcaaaaggcggaggcgatcggggtgtgctacggcatgagcgcgaacaacctgccgccgg 258 Query: 176 cgagcaccgtggtcaacatgttcaagtccaacgggatcaactccatgcggctgtacgctc 235 ||||| | ||||| |||| | |||||||| |||| || |||||||||||||| | Sbjct: 259 cgagctcggtggtggggatgtaccgctccaacggcatcacgtcgatgcggctgtacgcgc 318 Query: 236 ccgagcaggcggcgctgcag 255 | || ||||||||||||||| Sbjct: 319 cggaccaggcggcgctgcag 338
>dbj|AK060867.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H03, full insert sequence Length = 1565 Score = 135 bits (68), Expect = 8e-29 Identities = 167/200 (83%) Strand = Plus / Plus Query: 56 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 115 ||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 135 gccaaggtgtagcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattc 194 Query: 116 cacaaagcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcgg 175 | |||| | |||| | |||||||||||||||||||||||||| ||||| |||||| ||| Sbjct: 195 ctcaaaaggcggaggcgatcggggtgtgctacggcatgagcgcgaacaacctgccgccgg 254 Query: 176 cgagcaccgtggtcaacatgttcaagtccaacgggatcaactccatgcggctgtacgctc 235 ||||| | ||||| |||| | |||||||| |||| || |||||||||||||| | Sbjct: 255 cgagctcggtggtggggatgtaccgctccaacggcatcacgtcgatgcggctgtacgcgc 314 Query: 236 ccgagcaggcggcgctgcag 255 | || ||||||||||||||| Sbjct: 315 cggaccaggcggcgctgcag 334
>dbj|AB108313.1| Phleum pratense DNA, SSR, microsatellite B02-C07 Length = 564 Score = 89.7 bits (45), Expect = 4e-15 Identities = 71/77 (92%), Gaps = 2/77 (2%) Strand = Plus / Plus Query: 48 aatggcaggccaaggc-gttgcctccatgttggctctggcattgctcctc-ggagccttc 105 ||||||| ||||||| |||||||||||||| ||||| |||||||||||| ||||||||| Sbjct: 174 aatggcaagccaagggtgttgcctccatgttcgctctcgcattgctcctcgggagccttc 233 Query: 106 gcctccatcccacaaag 122 ||||||||||||||||| Sbjct: 234 gcctccatcccacaaag 250
>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12, complete sequence Length = 121293 Score = 85.7 bits (43), Expect = 6e-14 Identities = 103/123 (83%) Strand = Plus / Minus Query: 133 atcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgtggtcaac 192 |||||||||||||||||||||||||| ||||| |||||| |||||||| | ||||| Sbjct: 94115 atcggggtgtgctacggcatgagcgcgaacaacctgccgccggcgagctcggtggtgggg 94056 Query: 193 atgttcaagtccaacgggatcaactccatgcggctgtacgctcccgagcaggcggcgctg 252 |||| | |||||||| |||| || |||||||||||||| || || |||||||||||| Sbjct: 94055 atgtaccgctccaacggcatcacgtcgatgcggctgtacgcgccggaccaggcggcgctg 93996 Query: 253 cag 255 ||| Sbjct: 93995 cag 93993 Score = 69.9 bits (35), Expect = 4e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 56 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 115 ||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 97344 gccaaggtgtagcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattc 97285 Query: 116 cacaaag 122 | ||||| Sbjct: 97284 ctcaaag 97278
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 85.7 bits (43), Expect = 6e-14 Identities = 103/123 (83%) Strand = Plus / Minus Query: 133 atcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgtggtcaac 192 |||||||||||||||||||||||||| ||||| |||||| |||||||| | ||||| Sbjct: 17963366 atcggggtgtgctacggcatgagcgcgaacaacctgccgccggcgagctcggtggtgggg 17963307 Query: 193 atgttcaagtccaacgggatcaactccatgcggctgtacgctcccgagcaggcggcgctg 252 |||| | |||||||| |||| || |||||||||||||| || || |||||||||||| Sbjct: 17963306 atgtaccgctccaacggcatcacgtcgatgcggctgtacgcgccggaccaggcggcgctg 17963247 Query: 253 cag 255 ||| Sbjct: 17963246 cag 17963244 Score = 69.9 bits (35), Expect = 4e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 56 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 115 ||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 17966595 gccaaggtgtagcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattc 17966536 Query: 116 cacaaag 122 | ||||| Sbjct: 17966535 ctcaaag 17966529
>emb|X58877.1|OSGNS1 Oryza sativa gns1 gene for beta-glucanase Length = 6614 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 133 atcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 180 |||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 4518 atcggggtgtgctacggcatgagcgcgaacaacctgccgccggcgagc 4565 Score = 69.9 bits (35), Expect = 4e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 56 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 115 ||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 1295 gccaaggtgtagcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattc 1354 Query: 116 cacaaag 122 | ||||| Sbjct: 1355 ctcaaag 1361
>gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007A06, complete sequence Length = 148029 Score = 69.9 bits (35), Expect = 4e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 56 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 115 ||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 1922 gccaaggtgtagcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattc 1863 Query: 116 cacaaag 122 | ||||| Sbjct: 1862 ctcaaag 1856
>ref|NM_189709.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 999 Score = 65.9 bits (33), Expect = 6e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 128 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgtgg 187 ||||||| || |||||||||||| ||| || |||||| ||||||||||||||| ||| | Sbjct: 71 agtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagcgacgtcg 130 Query: 188 tcaacatgttcaagtccaacgggatcaactccatgcg 224 | || | | ||||||||| |||||| |||||||||| Sbjct: 131 tgaagctctacaagtccaaggggatcgactccatgcg 167
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 65.9 bits (33), Expect = 6e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 128 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgtgg 187 ||||||| || |||||||||||| ||| || |||||| ||||||||||||||| ||| | Sbjct: 41342332 agtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagcgacgtcg 41342391 Query: 188 tcaacatgttcaagtccaacgggatcaactccatgcg 224 | || | | ||||||||| |||||| |||||||||| Sbjct: 41342392 tgaagctctacaagtccaaggggatcgactccatgcg 41342428 Score = 42.1 bits (21), Expect = 0.86 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 tccatcggggtgtgctacggcatga 154 |||||||| |||||||||||||||| Sbjct: 41533245 tccatcggcgtgtgctacggcatga 41533221 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 tccatcggggtgtgctacggcatg 153 |||||||| ||||||||||||||| Sbjct: 41622966 tccatcggcgtgtgctacggcatg 41622989
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 65.9 bits (33), Expect = 6e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 128 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgtgg 187 ||||||| || |||||||||||| ||| || |||||| ||||||||||||||| ||| | Sbjct: 33825 agtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagcgacgtcg 33884 Query: 188 tcaacatgttcaagtccaacgggatcaactccatgcg 224 | || | | ||||||||| |||||| |||||||||| Sbjct: 33885 tgaagctctacaagtccaaggggatcgactccatgcg 33921
>gb|U72252.1|OSU72252 Oryza sativa beta-1,3-glucanase precursor (Gns6) gene, complete cds Length = 2169 Score = 65.9 bits (33), Expect = 6e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 128 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgtgg 187 ||||||| || |||||||||||| ||| || |||||| ||||||||||||||| ||| | Sbjct: 1241 agtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagcgacgtcg 1300 Query: 188 tcaacatgttcaagtccaacgggatcaactccatgcg 224 | || | | ||||||||| |||||| |||||||||| Sbjct: 1301 tgaagctctacaagtccaaggggatcgactccatgcg 1337
>dbj|AK105972.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F03, full insert sequence Length = 1240 Score = 65.9 bits (33), Expect = 6e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 128 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgtgg 187 ||||||| || |||||||||||| ||| || |||||| ||||||||||||||| ||| | Sbjct: 95 agtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagcgacgtcg 154 Query: 188 tcaacatgttcaagtccaacgggatcaactccatgcg 224 | || | | ||||||||| |||||| |||||||||| Sbjct: 155 tgaagctctacaagtccaaggggatcgactccatgcg 191
>dbj|AK068247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136H16, full insert sequence Length = 1245 Score = 65.9 bits (33), Expect = 6e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 128 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgtgg 187 ||||||| || |||||||||||| ||| || |||||| ||||||||||||||| ||| | Sbjct: 100 agtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagcgacgtcg 159 Query: 188 tcaacatgttcaagtccaacgggatcaactccatgcg 224 | || | | ||||||||| |||||| |||||||||| Sbjct: 160 tgaagctctacaagtccaaggggatcgactccatgcg 196
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.055 Identities = 23/23 (100%) Strand = Plus / Minus Query: 26 acgcagctagagagagaaagaga 48 ||||||||||||||||||||||| Sbjct: 21460864 acgcagctagagagagaaagaga 21460842
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 46.1 bits (23), Expect = 0.055 Identities = 23/23 (100%) Strand = Plus / Minus Query: 26 acgcagctagagagagaaagaga 48 ||||||||||||||||||||||| Sbjct: 18048 acgcagctagagagagaaagaga 18026
>dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0513E02 Length = 141477 Score = 46.1 bits (23), Expect = 0.055 Identities = 23/23 (100%) Strand = Plus / Minus Query: 26 acgcagctagagagagaaagaga 48 ||||||||||||||||||||||| Sbjct: 95364 acgcagctagagagagaaagaga 95342
>gb|AC106028.11| Homo sapiens chromosome 15, clone CTD-2313J17, complete sequence Length = 115174 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Minus Query: 33 tagagagagaaagagaatggca 54 |||||||||||||||||||||| Sbjct: 95702 tagagagagaaagagaatggca 95681
>ref|NM_189749.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1032 Score = 42.1 bits (21), Expect = 0.86 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 tccatcggggtgtgctacggcatga 154 |||||||| |||||||||||||||| Sbjct: 7 tccatcggcgtgtgctacggcatga 31
>gb|AC115341.6| Rattus norvegicus 3 BAC CH230-248O1 (Children's Hospital Oakland Research Institute) complete sequence Length = 237425 Score = 42.1 bits (21), Expect = 0.86 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 cacccacccacaccctcaccc 21 ||||||||||||||||||||| Sbjct: 94530 cacccacccacaccctcaccc 94510
>gb|AC126440.3| Mus musculus BAC clone RP23-413M14 from chromosome 14, complete sequence Length = 207346 Score = 42.1 bits (21), Expect = 0.86 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 cacccacccacaccctcaccc 21 ||||||||||||||||||||| Sbjct: 122292 cacccacccacaccctcaccc 122312
>emb|CR974412.1| M.murinus DNA sequence from clone CH257-37C10, complete sequence Length = 250701 Score = 42.1 bits (21), Expect = 0.86 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 agagagagaaagagaatggca 54 ||||||||||||||||||||| Sbjct: 122217 agagagagaaagagaatggca 122197
>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11, DP09G08, DP35C12 of chromosome 5 of Podospora anserina Length = 322194 Score = 42.1 bits (21), Expect = 0.86 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 cagctagagagagaaagagaa 49 ||||||||||||||||||||| Sbjct: 125860 cagctagagagagaaagagaa 125840
>gb|M23548.1|BLYGEH Hordeum vulgare 1,3-beta glucan endohydrolase precursor, mRNA, complete cds Length = 1250 Score = 42.1 bits (21), Expect = 0.86 Identities = 33/37 (89%) Strand = Plus / Plus Query: 128 agtccatcggggtgtgctacggcatgagcgccaacaa 164 |||||||||| |||||||||||| ||| || |||||| Sbjct: 127 agtccatcggcgtgtgctacggcgtgatcggcaacaa 163
>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0614D08 Length = 147548 Score = 42.1 bits (21), Expect = 0.86 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 tccatcggggtgtgctacggcatga 154 |||||||| |||||||||||||||| Sbjct: 89538 tccatcggcgtgtgctacggcatga 89514
>gb|AC133477.2| Homo sapiens 3 BAC RP11-364M20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 101061 Score = 42.1 bits (21), Expect = 0.86 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 cagctagagagagaaagagaa 49 ||||||||||||||||||||| Sbjct: 48600 cagctagagagagaaagagaa 48620
>gb|AF030771.1|AF030771 Hordeum vulgare beta-1,3-glucanase 2 (BGL32) gene, complete cds Length = 1242 Score = 42.1 bits (21), Expect = 0.86 Identities = 33/37 (89%) Strand = Plus / Plus Query: 128 agtccatcggggtgtgctacggcatgagcgccaacaa 164 |||||||||| |||||||||||| ||| || |||||| Sbjct: 261 agtccatcggcgtgtgctacggcgtgatcggcaacaa 297
>gb|U72248.1|OSU72248 Oryza sativa beta-1,3-glucanase precursor (Gns2) gene, complete cds Length = 2230 Score = 42.1 bits (21), Expect = 0.86 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 tccatcggggtgtgctacggcatga 154 |||||||| |||||||||||||||| Sbjct: 1301 tccatcggcgtgtgctacggcatga 1325
>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0660F12 Length = 147203 Score = 42.1 bits (21), Expect = 0.86 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 tccatcggggtgtgctacggcatga 154 |||||||| |||||||||||||||| Sbjct: 101444 tccatcggcgtgtgctacggcatga 101420
>emb|AJ271367.1|HVU271367 Hordeum vulgare mRNA for beta-1,3-glucanase Length = 1257 Score = 42.1 bits (21), Expect = 0.86 Identities = 33/37 (89%) Strand = Plus / Plus Query: 128 agtccatcggggtgtgctacggcatgagcgccaacaa 164 |||||||||| |||||||||||| ||| || |||||| Sbjct: 129 agtccatcggcgtgtgctacggcgtgatcggcaacaa 165
>gb|AY612193.1| Hordeum vulgare beta-1,3-glucanase 2a mRNA, complete cds Length = 1249 Score = 42.1 bits (21), Expect = 0.86 Identities = 45/53 (84%) Strand = Plus / Plus Query: 128 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 180 |||||||||| |||||||||||| ||| || |||| |||||| |||||||| Sbjct: 135 agtccatcggcgtgtgctacggcgtgaacggcaacggtctgccctcggcgagc 187
>gb|AC131724.4| Mus musculus BAC clone RP23-129E9 from 19, complete sequence Length = 225611 Score = 42.1 bits (21), Expect = 0.86 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 agagagagaaagagaatggca 54 ||||||||||||||||||||| Sbjct: 72123 agagagagaaagagaatggca 72103
>ref|XM_463703.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1899 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 tccatcggggtgtgctacggcatg 153 |||||||| ||||||||||||||| Sbjct: 967 tccatcggcgtgtgctacggcatg 990
>gb|AC114904.7| Mus musculus chromosome 1, clone RP24-121J22, complete sequence Length = 156574 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 agagagagaaagagaatggc 53 |||||||||||||||||||| Sbjct: 151687 agagagagaaagagaatggc 151668
>emb|AJ295946.1|FPR295946 Festuca pratensis mRNA for Glu1 protein Length = 1224 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 gagtccatcggggtgtgctacggc 150 ||||||||||| |||||||||||| Sbjct: 134 gagtccatcggcgtgtgctacggc 157
>gb|AC132392.3| Mus musculus BAC clone RP23-386F15 from chromosome 7, complete sequence Length = 208499 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cacccacccacaccctcacc 20 |||||||||||||||||||| Sbjct: 152933 cacccacccacaccctcacc 152914
>emb|BX663531.3| Chicken DNA sequence from clone WAG-18M1, complete sequence Length = 111106 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tggctctggcattgctcctc 96 |||||||||||||||||||| Sbjct: 83619 tggctctggcattgctcctc 83600
>gb|AC004917.2| Homo sapiens PAC clone RP5-892G19 from 7, complete sequence Length = 110233 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cacccacccacaccctcacc 20 |||||||||||||||||||| Sbjct: 35392 cacccacccacaccctcacc 35411
>gb|AC122738.10| Mus musculus chromosome 1, clone RP23-68E17, complete sequence Length = 164639 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 agagagagaaagagaatggc 53 |||||||||||||||||||| Sbjct: 56918 agagagagaaagagaatggc 56899
>gb|AC144476.11| Medicago truncatula clone mth2-10a6, complete sequence Length = 119355 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agctagagagagaaagagaa 49 |||||||||||||||||||| Sbjct: 33317 agctagagagagaaagagaa 33336
>gb|AC144591.10| Medicago truncatula clone mth2-5f17, complete sequence Length = 128352 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agctagagagagaaagagaa 49 |||||||||||||||||||| Sbjct: 120336 agctagagagagaaagagaa 120317
>gb|AC152406.8| Medicago truncatula clone mth2-71o20, complete sequence Length = 114919 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agctagagagagaaagagaa 49 |||||||||||||||||||| Sbjct: 98749 agctagagagagaaagagaa 98768
>gb|AC146789.30| Medicago truncatula clone mth2-71h24, complete sequence Length = 127922 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agctagagagagaaagagaa 49 |||||||||||||||||||| Sbjct: 126413 agctagagagagaaagagaa 126432 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agctagagagagaaagagaa 49 |||||||||||||||||||| Sbjct: 112655 agctagagagagaaagagaa 112674
>gb|AC147431.19| Medicago truncatula clone mth2-88g17, complete sequence Length = 145905 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agctagagagagaaagagaa 49 |||||||||||||||||||| Sbjct: 13198 agctagagagagaaagagaa 13217
>emb|AL138956.17| Human DNA sequence from clone RP11-16D22 on chromosome 13 Contains the 5' end of a novel gene, complete sequence Length = 165257 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agctagagagagaaagagaa 49 |||||||||||||||||||| Sbjct: 101021 agctagagagagaaagagaa 101040
>emb|AL031713.8|HS349E11 Human DNA sequence from clone LA16c-349E11 on chromosome 16 Contains the SSTR5 gene for somatostatin receptor 5, a GSS and five putative CpG islands, complete sequence Length = 33002 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 cacccacccacaccctcaccctcc 24 ||||||||||||||||| |||||| Sbjct: 20333 cacccacccacaccctccccctcc 20356
>emb|Y00449.1|DDEMR Desulfovibrio desulfuricans genes DdeM and DdeR for DdeI methylase and DdeI endonuclease Length = 2256 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 aatggcaggccaaggcgttg 67 |||||||||||||||||||| Sbjct: 2214 aatggcaggccaaggcgttg 2195
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 agcaggcggcgctgcaggcg 258 |||||||||||||||||||| Sbjct: 5659 agcaggcggcgctgcaggcg 5678
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 agcaggcggcgctgcaggcg 258 |||||||||||||||||||| Sbjct: 269533 agcaggcggcgctgcaggcg 269552
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 agcaggcggcgctgcaggcg 258 |||||||||||||||||||| Sbjct: 281867 agcaggcggcgctgcaggcg 281848
>emb|AL596130.13| Mouse DNA sequence from clone RP23-209O5 on chromosome 11, complete sequence Length = 203000 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cacccacccacaccctcacc 20 |||||||||||||||||||| Sbjct: 116838 cacccacccacaccctcacc 116857
>emb|AL645948.10| Mouse DNA sequence from clone RP23-298M7 on chromosome 11 Contains an H+ transporting ATP synthase mitochondrial F0 complex subunit g (Atp5l) pseudogene, a ferritin light chain 1 (Ftl1) pseudogene, three novel genes, the gene for a novel ENTH domain containing protein, the 5' end of the Sox30 gene for SRY-box containing gene 30 and three Cpg islands, complete sequence Length = 207877 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tagagagagaaagagaatgg 52 |||||||||||||||||||| Sbjct: 117713 tagagagagaaagagaatgg 117732
>gb|AE006466.1| Homo sapiens 16p13.3 sequence section 5 of 8 Length = 265786 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 cacccacccacaccctcaccctcc 24 ||||||||||||||||| |||||| Sbjct: 34630 cacccacccacaccctccccctcc 34653
>gb|AC095035.2| Homo sapiens chromosome 1 clone RP11-159J16, complete sequence Length = 173084 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tagagagagaaagagaatgg 52 |||||||||||||||||||| Sbjct: 57770 tagagagagaaagagaatgg 57789
>gb|AC007543.4| Homo sapiens 12p12 BAC RPCI11-1018J8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 212176 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcaacatgttcaagtccaac 207 |||||||||||||||||||| Sbjct: 87581 tcaacatgttcaagtccaac 87600
>emb|BX296521.18| Zebrafish DNA sequence from clone CH211-194E11 in linkage group 7, complete sequence Length = 185817 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 agagagagaaagagaatggc 53 |||||||||||||||||||| Sbjct: 118149 agagagagaaagagaatggc 118130
>dbj|AP003259.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466H10 Length = 176530 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 tccatcggggtgtgctacggcatg 153 |||||||| ||||||||||||||| Sbjct: 38568 tccatcggcgtgtgctacggcatg 38591
>dbj|AP004717.1| Gallus gallus genomic DNA, chromosome 5, clone:161D9, complete sequence Length = 221022 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tggctctggcattgctcctc 96 |||||||||||||||||||| Sbjct: 65499 tggctctggcattgctcctc 65518
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 tgccggcggcgagcaccgtggtca 190 ||||||||||| |||||||||||| Sbjct: 5905060 tgccggcggcgggcaccgtggtca 5905083
>dbj|AK102628.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099K11, full insert sequence Length = 2144 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 tccatcggggtgtgctacggcatg 153 |||||||| ||||||||||||||| Sbjct: 1062 tccatcggcgtgtgctacggcatg 1085
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 tgccggcggcgagcaccgtg 186 |||||||||||||||||||| Sbjct: 437224 tgccggcggcgagcaccgtg 437243
>dbj|AK063953.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-F10, full insert sequence Length = 2157 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 tccatcggggtgtgctacggcatg 153 |||||||| ||||||||||||||| Sbjct: 1068 tccatcggcgtgtgctacggcatg 1091
>gb|AC159011.2| Gallus gallus BAC clone CH261-107A24 from chromosome unknown, complete sequence Length = 249034 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tggctctggcattgctcctc 96 |||||||||||||||||||| Sbjct: 146727 tggctctggcattgctcctc 146746
>emb|AL833803.8| Mouse DNA sequence from clone RP23-244H7 on chromosome 2, complete sequence Length = 226251 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 aagagaatggcaggccaagg 62 |||||||||||||||||||| Sbjct: 159708 aagagaatggcaggccaagg 159727 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,563,942 Number of Sequences: 3902068 Number of extensions: 2563942 Number of successful extensions: 138768 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 138387 Number of HSP's gapped (non-prelim): 380 length of query: 261 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 239 effective length of database: 17,147,199,772 effective search space: 4098180745508 effective search space used: 4098180745508 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)