ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart55a03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY109729.1| Zea mays CL17488_1 mRNA sequence Length = 911 Score = 402 bits (203), Expect = e-109 Identities = 366/422 (86%) Strand = Plus / Minus Query: 189 actaaagcggtttcgaaggaaatagagcggattgaccaacttttctttacatatgctgat 248 |||||||| ||||| |||||| |||| |||||||| ||| || ||| || |||||| Sbjct: 735 actaaagcagtttccaaggaagtagaacggattgatcaannnnnctatacttacgctgat 676 Query: 249 agctcatccagcatgattgacccagaaggcatcgaaacactctgctctcatcttgaagtt 308 | |||||| |||||||||||||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 675 aactcatctggcatgattgacccagaaggcattgaaacactctgttctcaccttgaagtt 616 Query: 309 ccacatacagatgttcggattctgatgttagcatggaaaatgggctgtgaaaagcaaggt 368 || || || |||||| ||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 615 ccccacactgatgttaggattctaatgttagcatggaaaatgggctgtgataagcaaggt 556 Query: 369 tatttcactctggatgaatggagaactgggatgaaagctctgcgagctgatagcatcagt 428 ||||| || ||||||||||||||||||| |||||||||| |||||||| || || ||| Sbjct: 555 tattttaccttggatgaatggagaactggcttgaaagctcttcgagctgacagtattagt 496 Query: 429 aaactgaagaaagcctttcccgaactggtccaagaagttacgaggtcctctaatttccat 488 |||||||||||||| ||||| |||||||||||||| ||||| ||| | || |||||||| Sbjct: 495 aaactgaagaaagcatttccagaactggtccaagaggttacaaggccatccaatttccag 436 Query: 489 gatttctatccatatgcgttccgttattgcctaacagaggacaagaagaagtgtatagaa 548 |||||||| |||||| || ||||||||||| |||||||| |||||||||||||||||| Sbjct: 435 gatttctacatatatgcatttcgttattgcctcacagaggataagaagaagtgtatagaa 376 Query: 549 atacctgttgcttgtgagttgttgaatctagtgctgagcttgcagttccgcccgcaggtt 608 ||||| ||||||||||||||| |||||||||| | |||||||||||||||| |||||| Sbjct: 375 ataccagttgcttgtgagttgctgaatctagtattaggcttgcagttccgccctcaggtt 316 Query: 609 ga 610 || Sbjct: 315 ga 314 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Minus Query: 136 ccatgaggcgctcctccaagaagtcgtcgtcgtc 169 ||||||||||| |||| ||||| ||||||||||| Sbjct: 794 ccatgaggcgcacctcgaagaaatcgtcgtcgtc 761
>ref|XM_482600.1| Oryza sativa (japonica cultivar-group), mRNA Length = 306 Score = 204 bits (103), Expect = 2e-49 Identities = 184/211 (87%) Strand = Plus / Plus Query: 400 tgaaagctctgcgagctgatagcatcagtaaactgaagaaagcctttcccgaactggtcc 459 ||||||||||||||||||||| |||| ||| |||||||||| ||||| |||||||| | Sbjct: 23 tgaaagctctgcgagctgatactatcaacaaattgaagaaagcatttccagaactggtgc 82 Query: 460 aagaagttacgaggtcctctaatttccatgatttctatccatatgcgttccgttattgcc 519 |||||||||| ||| | || |||||||| ||||||||||||||||| || ||||| |||| Sbjct: 83 aagaagttacaaggccatcaaatttccaggatttctatccatatgcctttcgttactgcc 142 Query: 520 taacagaggacaagaagaagtgtatagaaatacctgttgcttgtgagttgttgaatctag 579 | |||||||| ||||||||||||||||||||||| |||||||||||| || ||||||||| Sbjct: 143 tgacagaggataagaagaagtgtatagaaataccagttgcttgtgagctgctgaatctag 202 Query: 580 tgctgagcttgcagttccgcccgcaggttga 610 | || | |||||||| ||||| |||||||| Sbjct: 203 tattggggttgcagtttcgcccccaggttga 233
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 117 bits (59), Expect = 4e-23 Identities = 71/75 (94%) Strand = Plus / Plus Query: 270 ccagaaggcatcgaaacactctgctctcatcttgaagttccacatacagatgttcggatt 329 ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| |||||| Sbjct: 21351176 ccagaaggcatcgaaacactctgttctcaccttgaagttcctcatacagatgtccggatt 21351235 Query: 330 ctgatgttagcatgg 344 ||||||||||||||| Sbjct: 21351236 ctgatgttagcatgg 21351250 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 523 cagaggacaagaagaagtgtatagaaatacctgttgcttgtgagttgttgaatctagtgc 582 ||||||| ||||||||||||||||||||||| |||||||||||| || |||||||||| Sbjct: 21351958 cagaggataagaagaagtgtatagaaataccagttgcttgtgagctgctgaatctagtat 21352017 Query: 583 tgagcttgcagttccgcccgcaggttga 610 || | |||||||| ||||| |||||||| Sbjct: 21352018 tggggttgcagtttcgcccccaggttga 21352045 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 400 tgaaagctctgcgagctgatagcatcagtaaactgaagaaagcctttcccgaactggtcc 459 ||||||||||||||||||||| |||| ||| |||||||||| ||||| |||||||| | Sbjct: 21351488 tgaaagctctgcgagctgatactatcaacaaattgaagaaagcatttccagaactggtgc 21351547 Query: 460 aagaagt 466 ||||||| Sbjct: 21351548 aagaagt 21351554 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 198 gtttcgaaggaaatagagcggattgaccaacttttctttacatatgctgatagctcatcc 257 ||||| |||||||| || ||||| ||||||||||||| ||| |||||||| |||||||| Sbjct: 21349993 gtttcaaaggaaattgaacggatcgaccaacttttctatacctatgctgacagctcatcg 21350052 Query: 258 agcatgattga 268 |||||||||| Sbjct: 21350053 ggcatgattga 21350063 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 137 catgaggcgctcctccaagaagtcgtcgtcgtcgtccgccgcggcc 182 ||||||||||||||| ||||||||||||||||| |||| |||||| Sbjct: 21348349 catgaggcgctcctcgaagaagtcgtcgtcgtccgccgcggcggcc 21348394 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 480 aatttccatgatttctatccatatgcgttccgttattgcctaacag 525 |||||||| ||||||||||||||||| || ||||| ||||| |||| Sbjct: 21351836 aatttccaggatttctatccatatgcctttcgttactgcctgacag 21351881 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 343 ggaaaatgggctgtgaaaagcaaggttattt 373 |||||||||| |||||||||||||| ||||| Sbjct: 21351332 ggaaaatggggtgtgaaaagcaagggtattt 21351362 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aagaagtcgtcgtcgtcgtc 172 |||||||||||||||||||| Sbjct: 25319346 aagaagtcgtcgtcgtcgtc 25319327
>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0524F03 Length = 167696 Score = 117 bits (59), Expect = 4e-23 Identities = 71/75 (94%) Strand = Plus / Plus Query: 270 ccagaaggcatcgaaacactctgctctcatcttgaagttccacatacagatgttcggatt 329 ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| |||||| Sbjct: 51101 ccagaaggcatcgaaacactctgttctcaccttgaagttcctcatacagatgtccggatt 51160 Query: 330 ctgatgttagcatgg 344 ||||||||||||||| Sbjct: 51161 ctgatgttagcatgg 51175 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 523 cagaggacaagaagaagtgtatagaaatacctgttgcttgtgagttgttgaatctagtgc 582 ||||||| ||||||||||||||||||||||| |||||||||||| || |||||||||| Sbjct: 51883 cagaggataagaagaagtgtatagaaataccagttgcttgtgagctgctgaatctagtat 51942 Query: 583 tgagcttgcagttccgcccgcaggttga 610 || | |||||||| ||||| |||||||| Sbjct: 51943 tggggttgcagtttcgcccccaggttga 51970 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 400 tgaaagctctgcgagctgatagcatcagtaaactgaagaaagcctttcccgaactggtcc 459 ||||||||||||||||||||| |||| ||| |||||||||| ||||| |||||||| | Sbjct: 51413 tgaaagctctgcgagctgatactatcaacaaattgaagaaagcatttccagaactggtgc 51472 Query: 460 aagaagt 466 ||||||| Sbjct: 51473 aagaagt 51479 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 198 gtttcgaaggaaatagagcggattgaccaacttttctttacatatgctgatagctcatcc 257 ||||| |||||||| || ||||| ||||||||||||| ||| |||||||| |||||||| Sbjct: 49918 gtttcaaaggaaattgaacggatcgaccaacttttctatacctatgctgacagctcatcg 49977 Query: 258 agcatgattga 268 |||||||||| Sbjct: 49978 ggcatgattga 49988 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 137 catgaggcgctcctccaagaagtcgtcgtcgtcgtccgccgcggcc 182 ||||||||||||||| ||||||||||||||||| |||| |||||| Sbjct: 48274 catgaggcgctcctcgaagaagtcgtcgtcgtccgccgcggcggcc 48319 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 480 aatttccatgatttctatccatatgcgttccgttattgcctaacag 525 |||||||| ||||||||||||||||| || ||||| ||||| |||| Sbjct: 51761 aatttccaggatttctatccatatgcctttcgttactgcctgacag 51806 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 343 ggaaaatgggctgtgaaaagcaaggttattt 373 |||||||||| |||||||||||||| ||||| Sbjct: 51257 ggaaaatggggtgtgaaaagcaagggtattt 51287
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccgcggcc 182 ||||||||||||||||||||||||| Sbjct: 2645607 gtcgtcgtcgtcgtccgccgcggcc 2645583 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 agtcgtcgtcgtcgtccgccg 177 ||||||||||||||||||||| Sbjct: 4600633 agtcgtcgtcgtcgtccgccg 4600613
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 tcgtcgtcgtcgtccgccgcggc 181 ||||||||||||||||||||||| Sbjct: 2345935 tcgtcgtcgtcgtccgccgcggc 2345913
>ref|XM_476112.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccgcg 179 |||||||||||||||||||||| Sbjct: 228 gtcgtcgtcgtcgtccgccgcg 249
>gb|AC158767.3| Mus musculus chromosome 1, clone RP24-128E5, complete sequence Length = 188758 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 ttctgatgttagcatggaaaat 349 |||||||||||||||||||||| Sbjct: 94597 ttctgatgttagcatggaaaat 94576
>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12, complete sequence Length = 172647 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccgcg 179 |||||||||||||||||||||| Sbjct: 41507 gtcgtcgtcgtcgtccgccgcg 41486
>dbj|AK049031.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230093G17 product:unclassifiable, full insert sequence Length = 2272 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 ttctgatgttagcatggaaaat 349 |||||||||||||||||||||| Sbjct: 2102 ttctgatgttagcatggaaaat 2081
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccgcg 179 |||||||||||||||||||||| Sbjct: 6211152 gtcgtcgtcgtcgtccgccgcg 6211131 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagaagtcgtcgtcgtcgtc 172 |||||||||||||||||||| Sbjct: 18923039 aagaagtcgtcgtcgtcgtc 18923058
>dbj|AB012244.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQJ16 Length = 57031 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 275 aggcatcgaaacactctgctctcatc 300 |||||||||||||||||| ||||||| Sbjct: 53246 aggcatcgaaacactctgatctcatc 53271
>dbj|AK110599.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-G03, full insert sequence Length = 853 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccgcg 179 |||||||||||||||||||||| Sbjct: 223 gtcgtcgtcgtcgtccgccgcg 202
>dbj|AK110596.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-F12, full insert sequence Length = 1272 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccgcg 179 |||||||||||||||||||||| Sbjct: 412 gtcgtcgtcgtcgtccgccgcg 433
>gb|AC117771.17| Mus musculus chromosome 1, clone RP24-512A5, complete sequence Length = 161292 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 ttctgatgttagcatggaaaat 349 |||||||||||||||||||||| Sbjct: 103250 ttctgatgttagcatggaaaat 103271
>gb|AY674163.1| Uncultured bacterium clone WLS-07 chitinase gene, partial cds Length = 784 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 gctgatagctcatccagcatg 263 ||||||||||||||||||||| Sbjct: 213 gctgatagctcatccagcatg 193
>ref|XM_474477.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4125 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccgc 178 ||||||||||||||||||||| Sbjct: 174 gtcgtcgtcgtcgtccgccgc 154
>ref|NM_187522.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 777 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccgcggcc 182 ||||||||||||||| ||||||||| Sbjct: 582 gtcgtcgtcgtcgtctgccgcggcc 606
>ref|XM_468155.1| Oryza sativa (japonica cultivar-group), mRNA Length = 942 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 155 gaagtcgtcgtcgtcgtccgccgcggccg 183 ||||||| |||||||||||||||| |||| Sbjct: 168 gaagtcgacgtcgtcgtccgccgccgccg 140
>ref|XM_469611.1| Oryza sativa (japonica cultivar-group), mRNA Length = 891 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccgc 178 ||||||||||||||||||||| Sbjct: 237 gtcgtcgtcgtcgtccgccgc 217
>ref|XM_614369.2| PREDICTED: Bos taurus protein tyrosine phosphatase, receptor type, N (PTPRN), mRNA Length = 2511 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 actctgctctcatcttgaagt 307 ||||||||||||||||||||| Sbjct: 987 actctgctctcatcttgaagt 1007
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccgc 178 ||||||||||||||||||||| Sbjct: 29535476 gtcgtcgtcgtcgtccgccgc 29535456 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccgcggcc 182 ||||||||||||||| ||||||||| Sbjct: 8608736 gtcgtcgtcgtcgtctgccgcggcc 8608712 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 tcgtcgtccgccgcggccgt 184 |||||||||||||||||||| Sbjct: 2013697 tcgtcgtccgccgcggccgt 2013678
>ref|XM_751954.1| Ustilago maydis 521 hypothetical protein (UM00900.1) partial mRNA Length = 1680 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccgc 178 ||||||||||||||||||||| Sbjct: 633 gtcgtcgtcgtcgtccgccgc 653
>gb|AC146247.3| Pan troglodytes BAC clone RP43-27N23 from 7, complete sequence Length = 157530 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 ccagcatgattgacccagaag 276 ||||||||||||||||||||| Sbjct: 69451 ccagcatgattgacccagaag 69471
>emb|AL049647.7|HSJ1027G4 Human DNA sequence from clone RP5-1027G4 on chromosome 20 Contains part of the SLC24A3 gene for solute carrier family 24 (sodium/potassium/calcium exchanger) member 3 and a novel gene, complete sequence Length = 164845 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 380 ggatgaatggagaactgggatgaaa 404 |||||||||||||||||||| |||| Sbjct: 109376 ggatgaatggagaactgggaagaaa 109400
>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19, complete sequence Length = 123272 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccgc 178 ||||||||||||||||||||| Sbjct: 73643 gtcgtcgtcgtcgtccgccgc 73623
>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02, complete sequence Length = 137327 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccgcggcc 182 ||||||||||||||| ||||||||| Sbjct: 89708 gtcgtcgtcgtcgtctgccgcggcc 89684
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 aagaagtcgtcgtcgtcgtccgccg 177 |||| |||||||||||||||||||| Sbjct: 91062 aagaggtcgtcgtcgtcgtccgccg 91038
>tpg|BK000369.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M89 transposase gene, complete cds Length = 26285 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 gagagagagggaggcggcgac 113 ||||||||||||||||||||| Sbjct: 21001 gagagagagggaggcggcgac 21021
>tpg|BK000341.1| TPA: TPA_exp: Oryza sativa (indica cultivar-group) transposon Rim2-M61 transposase gene, complete cds Length = 10365 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 gagagagagggaggcggcgac 113 ||||||||||||||||||||| Sbjct: 5081 gagagagagggaggcggcgac 5101
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccgc 178 ||||||||||||||||||||| Sbjct: 35448840 gtcgtcgtcgtcgtccgccgc 35448820 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccg 177 |||||||||||||||||||| Sbjct: 22134618 gtcgtcgtcgtcgtccgccg 22134637 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagaagtcgtcgtcgtcgtc 172 |||||||||||||||||||| Sbjct: 19799054 aagaagtcgtcgtcgtcgtc 19799073 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 tcgtcgtcgtcgtccgccgcggcc 182 ||||||||||||||| |||||||| Sbjct: 19492453 tcgtcgtcgtcgtcctccgcggcc 19492476
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 ccatgatttctatccatatgc 505 ||||||||||||||||||||| Sbjct: 21069059 ccatgatttctatccatatgc 21069079 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 tcgtcgtcgtcgtccgccgcggccg 183 |||||||||||||||||||| |||| Sbjct: 16176293 tcgtcgtcgtcgtccgccgcagccg 16176317 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 cgtcgtcgtcgtccgccgcggccg 183 |||||||||||||||| ||||||| Sbjct: 6316564 cgtcgtcgtcgtccgcggcggccg 6316541
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 tttctttacatatgctgatag 250 ||||||||||||||||||||| Sbjct: 7578386 tttctttacatatgctgatag 7578366
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccgc 178 ||||||||||||||||||||| Sbjct: 29626898 gtcgtcgtcgtcgtccgccgc 29626878 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccgcggcc 182 ||||||||||||||| ||||||||| Sbjct: 8606571 gtcgtcgtcgtcgtctgccgcggcc 8606547 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 tcgtcgtccgccgcggccgt 184 |||||||||||||||||||| Sbjct: 2013709 tcgtcgtccgccgcggccgt 2013690
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 155 gaagtcgtcgtcgtcgtccgccgcggccg 183 ||||||| |||||||||||||||| |||| Sbjct: 33373443 gaagtcgacgtcgtcgtccgccgccgccg 33373471 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 tcgtcgtcgtcgtccgccgc 178 |||||||||||||||||||| Sbjct: 33870941 tcgtcgtcgtcgtccgccgc 33870922 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 tcgtcgtcgtcgtccgccgc 178 |||||||||||||||||||| Sbjct: 20128499 tcgtcgtcgtcgtccgccgc 20128480 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccgcggc 181 ||||||||||||||| |||||||| Sbjct: 15715292 gtcgtcgtcgtcgtcagccgcggc 15715315 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccg 177 |||||||||||||||||||| Sbjct: 12532297 gtcgtcgtcgtcgtccgccg 12532278
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 aagaagtcgtcgtcgtcgtcc 173 ||||||||||||||||||||| Sbjct: 26584934 aagaagtcgtcgtcgtcgtcc 26584914 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 gagagagagggaggcggcgac 113 ||||||||||||||||||||| Sbjct: 10454594 gagagagagggaggcggcgac 10454614
>dbj|AP002480.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0469E05 Length = 160769 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 gagagagagggaggcggcgac 113 ||||||||||||||||||||| Sbjct: 99554 gagagagagggaggcggcgac 99574
>gb|AC120983.6| Oryza sativa chromosome 3 BAC OSJNBb0011H13 genomic sequence, complete sequence Length = 132782 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccgc 178 ||||||||||||||||||||| Sbjct: 58106 gtcgtcgtcgtcgtccgccgc 58086
>ref|NM_214113.1| Sus scrofa Janus kinase 2 (JAK2), mRNA Length = 4812 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 catcagtaaactgaagaaagc 442 ||||||||||||||||||||| Sbjct: 1543 catcagtaaactgaagaaagc 1563
>dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0511C01 Length = 170402 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 gagagagagggaggcggcgac 113 ||||||||||||||||||||| Sbjct: 161314 gagagagagggaggcggcgac 161334
>dbj|AP003212.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0049H05 Length = 161934 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 aagaagtcgtcgtcgtcgtcc 173 ||||||||||||||||||||| Sbjct: 58648 aagaagtcgtcgtcgtcgtcc 58628
>dbj|AP004725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0412C04 Length = 146849 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 tttctttacatatgctgatag 250 ||||||||||||||||||||| Sbjct: 138317 tttctttacatatgctgatag 138297
>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_C11 Length = 124827 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 tttctttacatatgctgatag 250 ||||||||||||||||||||| Sbjct: 1641 tttctttacatatgctgatag 1621
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 ccatgatttctatccatatgc 505 ||||||||||||||||||||| Sbjct: 161148 ccatgatttctatccatatgc 161168
>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556H01 Length = 149800 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 tcgtcgtcgtcgtccgccgcggccg 183 |||||||||||||||||||| |||| Sbjct: 80894 tcgtcgtcgtcgtccgccgcagccg 80918
>dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1715_H01 Length = 138733 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 155 gaagtcgtcgtcgtcgtccgccgcggccg 183 ||||||| |||||||||||||||| |||| Sbjct: 114193 gaagtcgacgtcgtcgtccgccgccgccg 114221
>dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1316_E06 Length = 110197 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 155 gaagtcgtcgtcgtcgtccgccgcggccg 183 ||||||| |||||||||||||||| |||| Sbjct: 4062 gaagtcgacgtcgtcgtccgccgccgccg 4090
>dbj|AK068934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E11, full insert sequence Length = 1137 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccgcggcc 182 ||||||||||||||| ||||||||| Sbjct: 639 gtcgtcgtcgtcgtctgccgcggcc 663
>dbj|AK068257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148O14, full insert sequence Length = 4471 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccgc 178 ||||||||||||||||||||| Sbjct: 315 gtcgtcgtcgtcgtccgccgc 295
>gb|AF075170.1|AF075170 Bos taurus islet cell autoantigen 512 mRNA, partial cds Length = 2949 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 actctgctctcatcttgaagt 307 ||||||||||||||||||||| Sbjct: 147 actctgctctcatcttgaagt 167
>dbj|AK063169.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-B11, full insert sequence Length = 1003 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccgc 178 ||||||||||||||||||||| Sbjct: 295 gtcgtcgtcgtcgtccgccgc 275
>dbj|AK062697.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-A10, full insert sequence Length = 513 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccgc 178 ||||||||||||||||||||| Sbjct: 288 gtcgtcgtcgtcgtccgccgc 268
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 485 ccatgatttctatccatatgc 505 ||||||||||||||||||||| Sbjct: 90359 ccatgatttctatccatatgc 90379
>emb|AJ580965.1|SHE580965 Suid herpesvirus 1 strain Kaplan UL5 gene, UL4 gene, UL6 gene (partial), UL3.5 gene, UL3 gene and UL2 gene (partial) Length = 5200 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 aagaagtcgtcgtcgtcgtccgccg 177 |||| |||||||||||||||||||| Sbjct: 2143 aagaggtcgtcgtcgtcgtccgccg 2119
>gb|AC130723.4| Mus musculus BAC clone RP24-409P7 from 8, complete sequence Length = 197951 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 taaactgaagaaagcctttcc 448 ||||||||||||||||||||| Sbjct: 178574 taaactgaagaaagcctttcc 178594
>gb|AC144944.5| Mus musculus BAC clone RP23-328K6 from 8, complete sequence Length = 185319 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 taaactgaagaaagcctttcc 448 ||||||||||||||||||||| Sbjct: 16467 taaactgaagaaagcctttcc 16487
>dbj|AB006011.1| Sus scrofa mRNA for JAK2, complete cds Length = 4812 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 catcagtaaactgaagaaagc 442 ||||||||||||||||||||| Sbjct: 1543 catcagtaaactgaagaaagc 1563
>dbj|AB036337.1| Sus scrofa mRNA for kinase-defective JAK2 variant, complete cds Length = 4042 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 catcagtaaactgaagaaagc 442 ||||||||||||||||||||| Sbjct: 1633 catcagtaaactgaagaaagc 1653
>dbj|AB036336.1| Sus scrofa mRNA for kinase-defective JAK2 variant, complete cds Length = 4599 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 catcagtaaactgaagaaagc 442 ||||||||||||||||||||| Sbjct: 1520 catcagtaaactgaagaaagc 1540
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003A09, complete sequence Length = 167222 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 tcgtcgtccgccgcggccgt 184 |||||||||||||||||||| Sbjct: 52458 tcgtcgtccgccgcggccgt 52439
>ref|XM_483293.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2519 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagaagtcgtcgtcgtcgtc 172 |||||||||||||||||||| Sbjct: 1952 aagaagtcgtcgtcgtcgtc 1971
>ref|XM_468262.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1335 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tcgtcgtcgtcgtccgccgc 178 |||||||||||||||||||| Sbjct: 184 tcgtcgtcgtcgtccgccgc 203
>ref|XM_465522.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2337 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccgcggc 181 ||||||||||||||| |||||||| Sbjct: 2226 gtcgtcgtcgtcgtcagccgcggc 2203
>ref|XM_465245.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1532 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccg 177 |||||||||||||||||||| Sbjct: 63 gtcgtcgtcgtcgtccgccg 82
>ref|XM_506789.1| PREDICTED Oryza sativa (japonica cultivar-group), P0572D06.16 mRNA Length = 1568 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccg 177 |||||||||||||||||||| Sbjct: 99 gtcgtcgtcgtcgtccgccg 118
>ref|XM_472637.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 537 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccg 177 |||||||||||||||||||| Sbjct: 459 gtcgtcgtcgtcgtccgccg 478
>ref|XM_472326.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 618 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 tcgtcgtcgtcgtccgccgcggcc 182 ||||||||||||||| |||||||| Sbjct: 482 tcgtcgtcgtcgtcctccgcggcc 459
>ref|XM_472355.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 879 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagaagtcgtcgtcgtcgtc 172 |||||||||||||||||||| Sbjct: 73 aagaagtcgtcgtcgtcgtc 92
>gb|AC163331.8| Mus musculus chromosome 5, clone RP23-50G20, complete sequence Length = 257982 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 ggttatttcactctggatga 385 |||||||||||||||||||| Sbjct: 221908 ggttatttcactctggatga 221927
>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01, complete sequence Length = 164709 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagaagtcgtcgtcgtcgtc 172 |||||||||||||||||||| Sbjct: 90417 aagaagtcgtcgtcgtcgtc 90436
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccg 177 |||||||||||||||||||| Sbjct: 951708 gtcgtcgtcgtcgtccgccg 951727
>gb|AC146524.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055H15, complete sequence Length = 28312 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aagaagtcgtcgtcgtcgtc 172 |||||||||||||||||||| Sbjct: 19908 aagaagtcgtcgtcgtcgtc 19889
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagaagtcgtcgtcgtcgtc 172 |||||||||||||||||||| Sbjct: 131734 aagaagtcgtcgtcgtcgtc 131753
>ref|XM_656537.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4025.2), mRNA Length = 1143 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 atggagaactgggatgaaag 405 |||||||||||||||||||| Sbjct: 667 atggagaactgggatgaaag 686
>gb|AC146296.3| Mus musculus BAC clone RP23-277D1 from chromosome 9, complete sequence Length = 177641 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ttttctttacatatgctgat 248 |||||||||||||||||||| Sbjct: 168905 ttttctttacatatgctgat 168886
>emb|CR792453.9| Zebrafish DNA sequence from clone DKEY-12F6 in linkage group 3, complete sequence Length = 198873 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 556 ttgcttgtgagttgttgaat 575 |||||||||||||||||||| Sbjct: 95383 ttgcttgtgagttgttgaat 95364
>gb|AC131703.3| Mus musculus BAC clone RP24-141B8 from chromosome 9, complete sequence Length = 135770 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 ttttctttacatatgctgat 248 |||||||||||||||||||| Sbjct: 98604 ttttctttacatatgctgat 98623
>ref|XM_541301.2| PREDICTED: Canis familiaris similar to JAK2, transcript variant 1 (JAK2), mRNA Length = 3623 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 atcagtaaactgaagaaagc 442 |||||||||||||||||||| Sbjct: 1235 atcagtaaactgaagaaagc 1254
>ref|XM_856033.1| PREDICTED: Canis familiaris similar to JAK2, transcript variant 3 (JAK2), mRNA Length = 2836 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 atcagtaaactgaagaaagc 442 |||||||||||||||||||| Sbjct: 448 atcagtaaactgaagaaagc 467
>ref|XM_500763.1| Yarrowia lipolytica CLIB122, YALI0B11506g predicted mRNA Length = 1776 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 gaagtcgtcgtcgtcgtccg 174 |||||||||||||||||||| Sbjct: 1014 gaagtcgtcgtcgtcgtccg 1033
>gb|AY152833.1| Felis catus clone BAC 244e2 major histocompatiblity complex classical class II region, partial sequence Length = 147595 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 tggaaaatgggctgtgaaaa 361 |||||||||||||||||||| Sbjct: 15085 tggaaaatgggctgtgaaaa 15066
>gb|AY152831.1| Felis catus clone PAC 6B1 major histocompatiblity complex classical class II region, partial sequence Length = 60089 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 tggaaaatgggctgtgaaaa 361 |||||||||||||||||||| Sbjct: 38930 tggaaaatgggctgtgaaaa 38911
>emb|BX537106.6| Zebrafish DNA sequence from clone DKEY-98P3 in linkage group 20 Contains the gene for a novel protein similar to vertebrate dermatopontin (DPT), the atp1b1a gene for ATPase, Na+/K+ transporting, beta 1a polypeptide, the gene for a novel protein containing a homocysteine S-methyltransferase domain, the bivm gene for basic, immunoglobulin-like variable motif containing, the 5' end of the gene for a novel zinc finger protein (wu:fc06h02), the ndpkz4 gene for nucleoside diphosphate kinase-Z4 and the gene for a novel protein containing an inosine-uridine preferring nucleoside hydrolase doamin, complete sequence Length = 162005 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 tgaatggagaactgggatga 402 |||||||||||||||||||| Sbjct: 146776 tgaatggagaactgggatga 146795
>emb|AL731642.3|OSJN00289 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0014D23, complete sequence Length = 133759 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagaagtcgtcgtcgtcgtc 172 |||||||||||||||||||| Sbjct: 87516 aagaagtcgtcgtcgtcgtc 87535
>emb|AL731606.2|OSJN00249 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058G03, complete sequence Length = 46422 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccg 177 |||||||||||||||||||| Sbjct: 33099 gtcgtcgtcgtcgtccgccg 33118
>gb|AC084855.4| Homo sapiens chromosome 15, clone CTD-3076O17, complete sequence Length = 180944 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tgaaaagcaaggttatttca 375 |||||||||||||||||||| Sbjct: 11587 tgaaaagcaaggttatttca 11568
>gb|AC090825.5| Homo sapiens chromosome 15, clone CTD-2054N24, complete sequence Length = 170507 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tgaaaagcaaggttatttca 375 |||||||||||||||||||| Sbjct: 149008 tgaaaagcaaggttatttca 148989
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccg 177 |||||||||||||||||||| Sbjct: 3463735 gtcgtcgtcgtcgtccgccg 3463754
>gb|AF411390.1| Danio rerio basic, immunoglobulin-like variable motif-containing protein (bivm) mRNA, complete cds Length = 1946 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 tgaatggagaactgggatga 402 |||||||||||||||||||| Sbjct: 164 tgaatggagaactgggatga 145
>gb|AC093718.3| Homo sapiens 12 BAC RP11-742C6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160904 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 ccagcatgattgacccagaaggca 279 |||||| ||||||||||||||||| Sbjct: 46249 ccagcaagattgacccagaaggca 46226
>ref|XM_681780.1| PREDICTED: Danio rerio similar to basic, immunoglobulin-like variable motif-containing protein (LOC558550), mRNA Length = 2362 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 tgaatggagaactgggatga 402 |||||||||||||||||||| Sbjct: 164 tgaatggagaactgggatga 145
>ref|XM_680667.1| PREDICTED: Danio rerio similar to basic, immunoglobulin-like variable motif-containing protein (LOC557581), mRNA Length = 2358 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 tgaatggagaactgggatga 402 |||||||||||||||||||| Sbjct: 160 tgaatggagaactgggatga 141
>ref|XM_677955.1| PREDICTED: Danio rerio similar to basic, immunoglobulin-like variable motif containing (LOC555455), mRNA Length = 2358 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 tgaatggagaactgggatga 402 |||||||||||||||||||| Sbjct: 160 tgaatggagaactgggatga 141
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 540 tgtatagaaatacctgttgcttgt 563 |||||||||||| ||||||||||| Sbjct: 518520 tgtatagaaatatctgttgcttgt 518543
>gb|AC078944.5|AC078944 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0089D15, from Chromosome 10, complete sequence Length = 164679 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cgagagagagggaggcggcg 111 |||||||||||||||||||| Sbjct: 47270 cgagagagagggaggcggcg 47251
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 tgaagaaagcctttcccgaactgg 456 ||||||||||| |||||||||||| Sbjct: 5447879 tgaagaaagccgttcccgaactgg 5447856
>gb|AC090056.2|AC090056 Oryza sativa chromosome 9 clone PAC0663H05, complete sequence Length = 161873 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 cgtcgtcgtcgtccgccgcggccg 183 |||||||||||||||| ||||||| Sbjct: 113088 cgtcgtcgtcgtccgcggcggccg 113111
>tpg|BK000374.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M93, complete sequence Length = 35650 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cgagagagagggaggcggcg 111 |||||||||||||||||||| Sbjct: 31690 cgagagagagggaggcggcg 31671
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 aagtcgtcgtcgtcgtccgccgcg 179 |||||| ||||||||||||||||| Sbjct: 22203081 aagtcggcgtcgtcgtccgccgcg 22203058
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aagaagtcgtcgtcgtcgtc 172 |||||||||||||||||||| Sbjct: 7050821 aagaagtcgtcgtcgtcgtc 7050802
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cgagagagagggaggcggcg 111 |||||||||||||||||||| Sbjct: 4050441 cgagagagagggaggcggcg 4050422
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccg 177 |||||||||||||||||||| Sbjct: 21553801 gtcgtcgtcgtcgtccgccg 21553820
>emb|AL662997.3|OSJN00205 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039F02, complete sequence Length = 122499 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 tcgtcgtcgtcgtccgccgcggcc 182 ||||||||||||||| |||||||| Sbjct: 13100 tcgtcgtcgtcgtcctccgcggcc 13123
>gb|AC022368.2|AC022368 Mus musculus strain C57BL6/J clone RP23-192D21, complete sequence Length = 207757 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 aaaatgggctgtgaaaagca 364 |||||||||||||||||||| Sbjct: 7980 aaaatgggctgtgaaaagca 7999
>gb|AC018552.6| Homo sapiens chromosome 16 clone RP11-405F3, complete sequence Length = 152156 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ccaccatgaggcgctcctcc 152 |||||||||||||||||||| Sbjct: 35072 ccaccatgaggcgctcctcc 35091
>gb|AC011372.7| Homo sapiens chromosome 5 clone CTB-108B20, complete sequence Length = 183330 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 aatgggctgtgaaaagcaag 366 |||||||||||||||||||| Sbjct: 61459 aatgggctgtgaaaagcaag 61478
>dbj|AP006758.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0663H05 Length = 161938 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 cgtcgtcgtcgtccgccgcggccg 183 |||||||||||||||| ||||||| Sbjct: 48843 cgtcgtcgtcgtccgcggcggccg 48820
>dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0472F10 Length = 136076 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 tcgtcgtcgtcgtccgccgc 178 |||||||||||||||||||| Sbjct: 1805 tcgtcgtcgtcgtccgccgc 1786
>dbj|AP004235.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0006G05 Length = 56865 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccg 177 |||||||||||||||||||| Sbjct: 175 gtcgtcgtcgtcgtccgccg 194
>dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1582_D10 Length = 103475 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccg 177 |||||||||||||||||||| Sbjct: 91585 gtcgtcgtcgtcgtccgccg 91604
>dbj|AP004847.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1298_H07 Length = 106434 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 tcgtcgtcgtcgtccgccgc 178 |||||||||||||||||||| Sbjct: 77022 tcgtcgtcgtcgtccgccgc 77003
>dbj|AP004094.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1695_H09 Length = 114721 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 tcgtcgtcgtcgtccgccgc 178 |||||||||||||||||||| Sbjct: 87519 tcgtcgtcgtcgtccgccgc 87500
>dbj|AP003975.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_E04 Length = 133621 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 tcgtcgtcgtcgtccgccgc 178 |||||||||||||||||||| Sbjct: 29904 tcgtcgtcgtcgtccgccgc 29885
>dbj|AP005514.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0035A24 Length = 176446 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccgcggc 181 ||||||||||||||| |||||||| Sbjct: 123979 gtcgtcgtcgtcgtcagccgcggc 124002
>dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0572D06 Length = 148920 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 gtcgtcgtcgtcgtccgccg 177 |||||||||||||||||||| Sbjct: 36830 gtcgtcgtcgtcgtccgccg 36811
>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016N23 Length = 147336 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aagaagtcgtcgtcgtcgtc 172 |||||||||||||||||||| Sbjct: 94531 aagaagtcgtcgtcgtcgtc 94512
>gb|AC158405.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1366F05, complete sequence Length = 171022 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cgagagagagggaggcggcg 111 |||||||||||||||||||| Sbjct: 14413 cgagagagagggaggcggcg 14432
>dbj|AK105757.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D03, full insert sequence Length = 1532 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccg 177 |||||||||||||||||||| Sbjct: 63 gtcgtcgtcgtcgtccgccg 82
>dbj|AK105440.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H10, full insert sequence Length = 2323 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagaagtcgtcgtcgtcgtc 172 |||||||||||||||||||| Sbjct: 211 aagaagtcgtcgtcgtcgtc 230
>dbj|AK102641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100F02, full insert sequence Length = 1302 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccg 177 |||||||||||||||||||| Sbjct: 1036 gtcgtcgtcgtcgtccgccg 1055
>dbj|AK101254.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032F20, full insert sequence Length = 2519 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagaagtcgtcgtcgtcgtc 172 |||||||||||||||||||| Sbjct: 1952 aagaagtcgtcgtcgtcgtc 1971
>dbj|AK101059.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022A10, full insert sequence Length = 4115 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 aagtcgtcgtcgtcgtccgccgcg 179 |||||| ||||||||||||||||| Sbjct: 490 aagtcggcgtcgtcgtccgccgcg 513
>dbj|AK073932.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076K03, full insert sequence Length = 1567 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccg 177 |||||||||||||||||||| Sbjct: 98 gtcgtcgtcgtcgtccgccg 117
>dbj|AK067183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095L01, full insert sequence Length = 3231 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 tcgtcgtccgccgcggccgt 184 |||||||||||||||||||| Sbjct: 248 tcgtcgtccgccgcggccgt 267
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccgcggc 181 |||||||||||||||| ||||||| Sbjct: 1010709 gtcgtcgtcgtcgtccaccgcggc 1010732
>gb|AC138398.9| Mus musculus chromosome 5, clone RP23-309P20, complete sequence Length = 190846 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 ggttatttcactctggatga 385 |||||||||||||||||||| Sbjct: 42331 ggttatttcactctggatga 42312
>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from chromosome 4, complete sequence Length = 90825 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccg 177 |||||||||||||||||||| Sbjct: 59124 gtcgtcgtcgtcgtccgccg 59143
>gb|AC102452.7| Mus musculus chromosome 5, clone RP24-272L20, complete sequence Length = 183858 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 aaaatgggctgtgaaaagca 364 |||||||||||||||||||| Sbjct: 90889 aaaatgggctgtgaaaagca 90870
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cgagagagagggaggcggcg 111 |||||||||||||||||||| Sbjct: 4051262 cgagagagagggaggcggcg 4051243
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aagaagtcgtcgtcgtcgtc 172 |||||||||||||||||||| Sbjct: 7116792 aagaagtcgtcgtcgtcgtc 7116773
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 aagtcgtcgtcgtcgtccgccgcg 179 |||||| ||||||||||||||||| Sbjct: 22131426 aagtcggcgtcgtcgtccgccgcg 22131403
>emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123_B09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155585 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 aagtcgtcgtcgtcgtccgccgcg 179 |||||| ||||||||||||||||| Sbjct: 49929 aagtcggcgtcgtcgtccgccgcg 49952
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gtcgtcgtcgtcgtccgccg 177 |||||||||||||||||||| Sbjct: 4479 gtcgtcgtcgtcgtccgccg 4498
>gb|AY574306.1| Ditylenchus sp. F SAS-2004 internal transcribed spacer 2, complete sequence Length = 195 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 ggttatttcactctggatga 385 |||||||||||||||||||| Sbjct: 158 ggttatttcactctggatga 177
>emb|AL671901.14| Mouse DNA sequence from clone RP23-238B14 on chromosome X, complete sequence Length = 201821 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 ggttatttcactctggatga 385 |||||||||||||||||||| Sbjct: 12982 ggttatttcactctggatga 12963
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 tgttcggattctgatgttag 339 |||||||||||||||||||| Sbjct: 15854 tgttcggattctgatgttag 15835
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 gaagtcgtcgtcgtcgtccg 174 |||||||||||||||||||| Sbjct: 1551178 gaagtcgtcgtcgtcgtccg 1551197
>emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, complete sequence Length = 188745 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 tgaatggagaactgggatga 402 |||||||||||||||||||| Sbjct: 57883 tgaatggagaactgggatga 57902
>emb|AL808141.8| Zebrafish DNA sequence from clone CH211-260N19, complete sequence Length = 147111 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 tgaatggagaactgggatga 402 |||||||||||||||||||| Sbjct: 50461 tgaatggagaactgggatga 50480 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,388,525 Number of Sequences: 3902068 Number of extensions: 5388525 Number of successful extensions: 149753 Number of sequences better than 10.0: 140 Number of HSP's better than 10.0 without gapping: 154 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 145293 Number of HSP's gapped (non-prelim): 4457 length of query: 613 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 590 effective length of database: 17,143,297,704 effective search space: 10114545645360 effective search space used: 10114545645360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
