ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart55a02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SP96_DICDI (P14328) Spore coat protein SP96 36 0.075
2YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 pre... 35 0.098
3HORN_HUMAN (Q86YZ3) Hornerin 33 0.49
4YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor 32 1.4
5SER1_GALME (O96614) Sericin-1 (Silk gum protein 1) (Fragment) 32 1.4
6HUNB_DROYA (O62541) Protein hunchback 31 1.9
7VIT2_CHICK (P02845) Vitellogenin-2 precursor (Vitellogenin II) (... 31 2.4
8SER2_GALME (O96615) Sericin-2 (Silk gum protein 2) (Fragment) 31 2.4
9VIT1_CHICK (P87498) Vitellogenin-1 precursor (Vitellogenin I) (M... 30 4.1
10MUC1_YEAST (P08640) Mucin-like protein 1 precursor 29 7.1
11METX_XANOR (Q5H124) Homoserine O-acetyltransferase (EC 2.3.1.31)... 29 7.1
12METX_XANOM (Q2P3Z2) Homoserine O-acetyltransferase (EC 2.3.1.31)... 29 7.1
13HRP1_PLAFA (P05227) Histidine-rich protein precursor (Clone PFHR... 29 9.2
14RPTN_MOUSE (P97347) Repetin 29 9.2

>SP96_DICDI (P14328) Spore coat protein SP96|
          Length = 600

 Score = 35.8 bits (81), Expect = 0.075
 Identities = 27/114 (23%), Positives = 39/114 (34%)
 Frame = +3

Query: 165 SSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAG 344
           +SG   ASSS   P    ASS+  SS  +                     PSS +  S+ 
Sbjct: 450 ASGSSAASSS---PSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSA 506

Query: 345 HPSTCSHHPASGSPDAASARXXXXXXXXXXXXXXXTRHPAAITAHVSTARHASS 506
             S+ S   A  S  ++S+                    AA T   +TA  A++
Sbjct: 507 PSSSASSSSAPSSSASSSSASSSSASSAATTAATTIATTAATTTATTTATTATT 560



 Score = 30.8 bits (68), Expect = 2.4
 Identities = 20/108 (18%), Positives = 36/108 (33%)
 Frame = +3

Query: 183 ASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAGHPSTCS 362
           ++S   A G    SSA  SS  +                     PSS +  S+   S  S
Sbjct: 425 STSDSSALGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSAAS 484

Query: 363 HHPASGSPDAASARXXXXXXXXXXXXXXXTRHPAAITAHVSTARHASS 506
             P+S +  ++S                 +  P++  +  S +  ++S
Sbjct: 485 SSPSSSASSSSSPSSSASSSSAPSSSASSSSAPSSSASSSSASSSSAS 532



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>YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 precursor|
          Length = 317

 Score = 35.4 bits (80), Expect = 0.098
 Identities = 26/132 (19%), Positives = 46/132 (34%), Gaps = 6/132 (4%)
 Frame = +3

Query: 144 PASCPQRSSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSS 323
           P+S   +SS    +SSS  +  +  +SS+  S  ++                   +  SS
Sbjct: 165 PSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSS 224

Query: 324 G------SHKSAGHPSTCSHHPASGSPDAASARXXXXXXXXXXXXXXXTRHPAAITAHVS 485
                     S+   +  S+   + + D++SA                    +A +A  S
Sbjct: 225 SFITSTTPASSSSSGAIVSNAKTASTDDSSSASSATSSVSSVVSSASSALSASASSASAS 284

Query: 486 TARHASSDGDPA 521
            +  ASSD  PA
Sbjct: 285 VSSSASSDASPA 296



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>HORN_HUMAN (Q86YZ3) Hornerin|
          Length = 2850

 Score = 33.1 bits (74), Expect = 0.49
 Identities = 26/117 (22%), Positives = 40/117 (34%), Gaps = 2/117 (1%)
 Frame = +3

Query: 168  SGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSA-- 341
            SG+   S  H +     +S  Q  SG++                   RH SS  H S+  
Sbjct: 733  SGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHG 792

Query: 342  GHPSTCSHHPASGSPDAASARXXXXXXXXXXXXXXXTRHPAAITAHVSTARHASSDG 512
             H S  S   + G  ++ S +               ++H +A     S  RH S+ G
Sbjct: 793  QHGSGTSCSSSCGHYESGSGQASGFGQHESGSGQGYSQHGSASGHFSSQGRHGSTSG 849



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>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor|
          Length = 374

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 23/114 (20%), Positives = 40/114 (35%)
 Frame = +3

Query: 147 ASCPQRSSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSG 326
           +S    SS   P+SSS       P+SS+  SS ++                      SS 
Sbjct: 133 SSTTSSSSSSSPSSSSTTTT-TSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--SSSS 189

Query: 327 SHKSAGHPSTCSHHPASGSPDAASARXXXXXXXXXXXXXXXTRHPAAITAHVST 488
           S  S+   S+ S   +S  P  +S                 +  P++ ++ ++T
Sbjct: 190 SSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITT 243



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>SER1_GALME (O96614) Sericin-1 (Silk gum protein 1) (Fragment)|
          Length = 115

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 20/79 (25%), Positives = 32/79 (40%)
 Frame = +3

Query: 165 SSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAG 344
           SSG   +S S  + G   +S +  SSG++                      SSGS  S+G
Sbjct: 11  SSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSG 70

Query: 345 HPSTCSHHPASGSPDAASA 401
              +     +SGS  ++S+
Sbjct: 71  SSGSSGSSGSSGSSSSSSS 89



 Score = 31.2 bits (69), Expect = 1.9
 Identities = 20/79 (25%), Positives = 32/79 (40%)
 Frame = +3

Query: 165 SSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAG 344
           SSG   +S S  + G   +S +  SSG++                      SSGS  S+G
Sbjct: 8   SSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSG 67

Query: 345 HPSTCSHHPASGSPDAASA 401
              +     +SGS  ++S+
Sbjct: 68  SSGSSGSSGSSGSSGSSSS 86



 Score = 30.4 bits (67), Expect = 3.2
 Identities = 22/78 (28%), Positives = 32/78 (41%)
 Frame = +3

Query: 165 SSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAG 344
           SSG   +S S  + G   +S +  SSG++                      SSGS  S+G
Sbjct: 23  SSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSG 82

Query: 345 HPSTCSHHPASGSPDAAS 398
             S+ S +  SGS   +S
Sbjct: 83  SSSSSSSN-GSGSSSGSS 99



 Score = 30.4 bits (67), Expect = 3.2
 Identities = 19/79 (24%), Positives = 32/79 (40%)
 Frame = +3

Query: 165 SSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAG 344
           SSG   +S S  + G   +S +  SSG++                      SSGS  S+G
Sbjct: 20  SSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSG 79

Query: 345 HPSTCSHHPASGSPDAASA 401
              + S   ++GS  ++ +
Sbjct: 80  SSGSSSSSSSNGSGSSSGS 98



 Score = 29.6 bits (65), Expect = 5.4
 Identities = 20/79 (25%), Positives = 30/79 (37%)
 Frame = +3

Query: 165 SSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAG 344
           SSG   +S S  + G   +S +  SSG++                      SS S  S G
Sbjct: 32  SSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSSSSSSNG 91

Query: 345 HPSTCSHHPASGSPDAASA 401
             S+     +SGS   +S+
Sbjct: 92  SGSSSGSSQSSGSQGGSSS 110



 Score = 29.6 bits (65), Expect = 5.4
 Identities = 19/79 (24%), Positives = 31/79 (39%)
 Frame = +3

Query: 165 SSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAG 344
           SSG   +S S  + G   +S +  SSG++                      SSGS  S+G
Sbjct: 5   SSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSG 64

Query: 345 HPSTCSHHPASGSPDAASA 401
              +     +SGS  ++ +
Sbjct: 65  SSGSSGSSGSSGSSGSSGS 83



 Score = 29.6 bits (65), Expect = 5.4
 Identities = 19/79 (24%), Positives = 31/79 (39%)
 Frame = +3

Query: 165 SSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAG 344
           SSG   +S S  + G   +S +  SSG++                      SSGS  S+G
Sbjct: 2   SSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSG 61

Query: 345 HPSTCSHHPASGSPDAASA 401
              +     +SGS  ++ +
Sbjct: 62  SSGSSGSSGSSGSSGSSGS 80



 Score = 28.9 bits (63), Expect = 9.2
 Identities = 19/80 (23%), Positives = 32/80 (40%)
 Frame = +3

Query: 165 SSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAG 344
           SSG   +S S  + G   +S +  SSG++                      SSGS  S+ 
Sbjct: 26  SSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSS 85

Query: 345 HPSTCSHHPASGSPDAASAR 404
             S+     +SGS  ++ ++
Sbjct: 86  SSSSNGSGSSSGSSQSSGSQ 105



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>HUNB_DROYA (O62541) Protein hunchback|
          Length = 759

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 23/83 (27%), Positives = 34/83 (40%)
 Frame = +3

Query: 153 CPQRSSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSH 332
           C   SS  +   ++H A     ASS   SSG +                    + +S S+
Sbjct: 637 CSGTSSADESMETAHVAQANTSASSTASSSGNSSNASS---------------NGNSSSN 681

Query: 333 KSAGHPSTCSHHPASGSPDAASA 401
            S+   S+ +  PASG+P AA A
Sbjct: 682 SSSNGTSSAAAAPASGTPAAAGA 704



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>VIT2_CHICK (P02845) Vitellogenin-2 precursor (Vitellogenin II) (Major|
            vitellogenin) [Contains: Lipovitellin-1 (Lipovitellin I)
            (LVI); Phosvitin (PV); Lipovitellin-2 (Lipovitellin II)
            (LVII); YGP40]
          Length = 1850

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
 Frame = +3

Query: 147  ASCPQRSSGRQPASSSH---RAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHP 317
            +S   RSS    +SSS+    +   + +SS+ RS  ++                      
Sbjct: 1200 SSSSSRSSSSSSSSSSNSKSSSSSSKSSSSSSRSRSSSKSSSSSSSSSSSSSSKSSSSRS 1259

Query: 318  SSGSHKSAGHPSTCSHHPA--SGSPDAASA 401
            SS S KS+ H S  SHH    +GS  ++S+
Sbjct: 1260 SSSSSKSSSHHSH-SHHSGHLNGSSSSSSS 1288



 Score = 30.0 bits (66), Expect = 4.1
 Identities = 19/81 (23%), Positives = 31/81 (38%)
 Frame = +3

Query: 159  QRSSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKS 338
            +RSS +   SS   +     +SS+ RSS ++                      S  S KS
Sbjct: 1180 KRSSSKSSNSSKRSSSSSSSSSSSSRSSSSSSSSSSNSKSSSSSSKSSSSSSRSRSSSKS 1239

Query: 339  AGHPSTCSHHPASGSPDAASA 401
            +   S+ S   +S S  + S+
Sbjct: 1240 SSSSSSSSSSSSSKSSSSRSS 1260



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>SER2_GALME (O96615) Sericin-2 (Silk gum protein 2) (Fragment)|
          Length = 220

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
 Frame = +3

Query: 183 ASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAGHPSTCS 362
           +SS++ + G   +SS   SSG++                    + +SGS ++    S+ S
Sbjct: 1   SSSTNNSSG---SSSTNNSSGSSSTNNSSGSSSTNNASGSSSSNNTSGSSRNNSSGSSSS 57

Query: 363 HHPASGSPDAASARXXXXXXXXXXXXXXXTRHPAAIT----AHVSTARHASSDG 512
           ++ +SGS    S+                +R+ ++ +    A  S++R  S+DG
Sbjct: 58  NNSSSGSSAGNSSGSSSSNSSGSSGIGSLSRNSSSSSSSQAAGSSSSRRVSADG 111



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>VIT1_CHICK (P87498) Vitellogenin-1 precursor (Vitellogenin I) (Minor|
            vitellogenin) [Contains: Lipovitellin-1 (Lipovitellin I)
            (LVI); Phosvitin (PV); Lipovitellin-2 (Lipovitellin II)
            (LVII); YGP42]
          Length = 1912

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 23/114 (20%), Positives = 41/114 (35%)
 Frame = +3

Query: 165  SSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAG 344
            SS    +SSS  +     +SS+ RSS ++D                     SS S++S+ 
Sbjct: 1151 SSSGSSSSSSSSSSSSSDSSSSSRSSSSSDSSSSSSSSSSSSSSKSKSSSRSSKSNRSSS 1210

Query: 345  HPSTCSHHPASGSPDAASARXXXXXXXXXXXXXXXTRHPAAITAHVSTARHASS 506
              +       S    ++S++               TR  A   +  ++  HAS+
Sbjct: 1211 SSN-------SKDSSSSSSKSNSKGSSSSSSKASGTRQKAKKQSKTTSFPHASA 1257



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>MUC1_YEAST (P08640) Mucin-like protein 1 precursor|
          Length = 1367

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 26/128 (20%), Positives = 43/128 (33%)
 Frame = +3

Query: 141 QPASCPQRSSGRQPASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPS 320
           + +S P  SS  + +SS+        +SSA  +S T +                    PS
Sbjct: 404 ESSSAPVTSSTTE-SSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPS 462

Query: 321 SGSHKSAGHPSTCSHHPASGSPDAASARXXXXXXXXXXXXXXXTRHPAAITAHVSTARHA 500
           S + +S+  P T S   +S +P    +                    A +    S+   +
Sbjct: 463 SSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTES 522

Query: 501 SSDGDPAP 524
           SS   P P
Sbjct: 523 SSAPAPTP 530



 Score = 28.9 bits (63), Expect = 9.2
 Identities = 28/136 (20%), Positives = 48/136 (35%), Gaps = 7/136 (5%)
 Frame = +3

Query: 141 QPASCPQRSSGRQPASSSHRAPGRQP--ASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRH 314
           + +S P  SS  + +S+    P      +SSA  +S T +                    
Sbjct: 338 ESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPT 397

Query: 315 PSSGSHKSAGHPSTCSHHPASGSPDAASARXXXXXXXXXXXXXXXTRHPAAIT-----AH 479
           PSS + +S+  P T S   +S +P  +S                 +    + T     A 
Sbjct: 398 PSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAP 457

Query: 480 VSTARHASSDGDPAPV 527
           V T   ++++   APV
Sbjct: 458 VPTPSSSTTESSSAPV 473



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>METX_XANOR (Q5H124) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine|
           O-trans-acetylase) (Homoserine transacetylase) (HTA)
          Length = 399

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
 Frame = -3

Query: 517 GSPSEEAWRAVETWAVMAAGWRVLEXXXXXXXXXXXWERAEAASGE--PEAGWWEQVEG 347
           G    +A  A ETW  +AA     +              A AA+ +  PE GWWE + G
Sbjct: 23  GGVLHQAHVAYETWGALAA-----DRSNAVLIVTGLSPNAHAAANQANPEPGWWEAMVG 76



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>METX_XANOM (Q2P3Z2) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine|
           O-trans-acetylase) (Homoserine transacetylase) (HTA)
          Length = 399

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
 Frame = -3

Query: 517 GSPSEEAWRAVETWAVMAAGWRVLEXXXXXXXXXXXWERAEAASGE--PEAGWWEQVEG 347
           G    +A  A ETW  +AA     +              A AA+ +  PE GWWE + G
Sbjct: 23  GGVLHQAHVAYETWGALAA-----DRSNAVLIVTGLSPNAHAAANQANPEPGWWEAMVG 76



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>HRP1_PLAFA (P05227) Histidine-rich protein precursor (Clone PFHRP-II)|
          Length = 332

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 13/65 (20%), Positives = 26/65 (40%)
 Frame = +3

Query: 183 ASSSHRAPGRQPASSAQRSSGTNDXXXXXXXXXXXXXXXXXXRHPSSGSHKSAGHPSTCS 362
           A+ +H A     A+ A  ++  +                    H ++ +H +A H +T +
Sbjct: 246 AADAHHATDAHHAADAHHATDAHHAADAHHAADAHHATDSHHAHHAADAHHAAAHHATDA 305

Query: 363 HHPAS 377
           HH A+
Sbjct: 306 HHAAA 310



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>RPTN_MOUSE (P97347) Repetin|
          Length = 1130

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 17/39 (43%), Positives = 17/39 (43%)
 Frame = +3

Query: 138 RQPASCPQRSSGRQPASSSHRAPGRQPASSAQRSSGTND 254
           RQ  S  Q   GRQ  SS     GRQ  SS Q   G  D
Sbjct: 432 RQDQSSHQGQKGRQDQSSHQGQKGRQDQSSHQGQKGRQD 470


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,009,506
Number of Sequences: 219361
Number of extensions: 397617
Number of successful extensions: 2373
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2332
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4085413911
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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