ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart54h12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF493985.1| Triticum aestivum H2A-1 gene, partial sequence Length = 538 Score = 75.8 bits (38), Expect = 9e-12 Identities = 53/58 (91%) Strand = Plus / Minus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 ||||||||||||||||||||||| ||||||||||||||||| || || ||||| |||| Sbjct: 323 gtcaccatcgcccacggcggtgtgatccccaacatcaactccgtgctgctccccaaga 266
>dbj|D38088.1|WHTPH2AB Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-3 Length = 1153 Score = 75.8 bits (38), Expect = 9e-12 Identities = 53/58 (91%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 |||||||||||||||||||| |||||||||||||||||||| || || ||||| |||| Sbjct: 375 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctccccaaga 432
>dbj|D38087.1|WHTPH2AA Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-2 Length = 717 Score = 75.8 bits (38), Expect = 9e-12 Identities = 53/58 (91%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 |||||||||||||||||||| |||||||||||||||||||| || || ||||| |||| Sbjct: 377 gtcaccatcgcccacggcggcgtcatccccaacatcaactccgtgctgctccccaaga 434
>gb|BT016569.1| Zea mays clone Contig402 mRNA sequence Length = 719 Score = 61.9 bits (31), Expect = 1e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaac 39 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 433 gtcaccatcgcccacggcggcgtcctccccaacatcaac 471
>gb|AY103710.1| Zea mays PCO123562 mRNA sequence Length = 770 Score = 61.9 bits (31), Expect = 1e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaac 39 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 433 gtcaccatcgcccacggcggcgtcctccccaacatcaac 471
>dbj|D38090.1|WHTPH2AD Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-9 Length = 704 Score = 60.0 bits (30), Expect = 6e-07 Identities = 51/58 (87%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 ||||||||||||||||| || || ||||||||||||||||| || || ||||| |||| Sbjct: 354 gtcaccatcgcccacggtggcgtgatccccaacatcaactccgtgctgctccccaaga 411
>emb|X94973.1|TAH2A274 T.aestivum histone H2A gene (clone TH274) Length = 2546 Score = 58.0 bits (29), Expect = 2e-06 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactc 41 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 2176 gtcaccatcgcccacggcggcgtcatccccacaatcaactc 2216
>gb|L75802.1|WHTHIH2A Triticum aestivum histone H2A gene, complete cds Length = 2546 Score = 58.0 bits (29), Expect = 2e-06 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactc 41 |||||||||||||||||||| |||||||||| |||||||| Sbjct: 2176 gtcaccatcgcccacggcggcgtcatccccacaatcaactc 2216
>gb|BC106331.1| Xenopus laevis cDNA clone MGC:130860 IMAGE:7205580, complete cds Length = 799 Score = 52.0 bits (26), Expect = 1e-04 Identities = 50/58 (86%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 |||||||||||||| ||||||||| | ||||||||| | ||||| || ||||| |||| Sbjct: 313 gtcaccatcgcccagggcggtgtcctgcccaacatccagtctgtgctgctccccaaga 370
>emb|X03018.1|XLHISH3A Xenopus laevis histone gene cluster XlH3-A with genes H1A, H2B, H3 and H4 Length = 8592 Score = 52.0 bits (26), Expect = 1e-04 Identities = 50/58 (86%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 |||||||||||||| ||||||||| | ||||||||| | ||||| || ||||| |||| Sbjct: 4672 gtcaccatcgcccagggcggtgtcctgcccaacatccagtctgtgctgctccccaaga 4729
>emb|AJ494852.1|ODI494852 Oikopleura dioica partial H2A.4 gene for histone H2A.4 Length = 2003 Score = 52.0 bits (26), Expect = 1e-04 Identities = 50/58 (86%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 |||||||||||||| || || ||| |||||||||||||| | | ||||||||| |||| Sbjct: 1452 gtcaccatcgcccagggtggcgtcctccccaacatcaaccccgctcttctccccaaga 1509
>gb|M21287.1|XELHX1H3 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster X1h3 Length = 8608 Score = 52.0 bits (26), Expect = 1e-04 Identities = 50/58 (86%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 |||||||||||||| ||||||||| | ||||||||| | ||||| || ||||| |||| Sbjct: 4689 gtcaccatcgcccagggcggtgtcctgcccaacatccagtctgtgctgctccccaaga 4746
>gb|M13637.1|SULHIS2A Sea urchin (L.pictus) testis histone H2a mRNA Length = 366 Score = 52.0 bits (26), Expect = 1e-04 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttct 50 |||||||||||||| || |||||| ||||||||||| | |||||||||| Sbjct: 259 gtcaccatcgcccaaggtggtgtcctccccaacatccaggctgttcttct 308
>gb|AY103585.1| Zea mays PCO123564 mRNA sequence Length = 1953 Score = 50.1 bits (25), Expect = 5e-04 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactc 41 ||||||||||| |||||||| ||| ||||||||||| |||| Sbjct: 551 gtcaccatcgcgcacggcggcgtcctccccaacatccactc 591
>ref|XM_482492.1| Oryza sativa (japonica cultivar-group), mRNA Length = 405 Score = 48.1 bits (24), Expect = 0.002 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatc 36 |||||||||||| ||||||| ||||| ||||||||| Sbjct: 304 gtcaccatcgccaacggcggcgtcatgcccaacatc 339
>emb|X06642.1|SPH2BAL3 Strongylocentrotus purpuratus late histone genes L3 H2b - H2a Length = 1980 Score = 48.1 bits (24), Expect = 0.002 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatc 36 |||||||||||||| || |||||| ||||||||||| Sbjct: 1461 gtcaccatcgcccaaggtggtgtcctccccaacatc 1496
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.002 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatc 36 |||||||||||| ||||||| ||||| ||||||||| Sbjct: 20566460 gtcaccatcgccaacggcggcgtcatgcccaacatc 20566495
>ref|NM_214553.1| Strongylocentrotus purpuratus late histone L3 H2a (LOC373348), mRNA Length = 381 Score = 48.1 bits (24), Expect = 0.002 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatc 36 |||||||||||||| || |||||| ||||||||||| Sbjct: 301 gtcaccatcgcccaaggtggtgtcctccccaacatc 336
>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0032E15 Length = 120419 Score = 48.1 bits (24), Expect = 0.002 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatc 36 |||||||||||| ||||||| ||||| ||||||||| Sbjct: 70421 gtcaccatcgccaacggcggcgtcatgcccaacatc 70456
>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 48.1 bits (24), Expect = 0.002 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatc 36 |||||||||||| ||||||| ||||| ||||||||| Sbjct: 40832 gtcaccatcgccaacggcggcgtcatgcccaacatc 40867
>gb|AY109370.1| Zea mays CL2029_4 mRNA sequence Length = 1051 Score = 48.1 bits (24), Expect = 0.002 Identities = 39/44 (88%) Strand = Plus / Plus Query: 4 accatcgcccacggcggtgtcatccccaacatcaactctgttct 47 |||||||| ||||||||||| ||||||| |||||| ||||||| Sbjct: 430 accatcgctcacggcggtgtgctccccaatatcaaccctgttct 473
>gb|U08225.1|ZMU08225 Zea mays W-22 histone H2A mRNA, complete cds Length = 714 Score = 48.1 bits (24), Expect = 0.002 Identities = 39/44 (88%) Strand = Plus / Plus Query: 4 accatcgcccacggcggtgtcatccccaacatcaactctgttct 47 |||||||| ||||||||||| ||||||| |||||| ||||||| Sbjct: 411 accatcgctcacggcggtgtgctccccaatatcaaccctgttct 454
>ref|XM_789760.1| PREDICTED: Strongylocentrotus purpuratus similar to H2A histone family, member X (LOC590143), mRNA Length = 378 Score = 46.1 bits (23), Expect = 0.008 Identities = 47/55 (85%) Strand = Plus / Plus Query: 4 accatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 ||||||||||| || |||||| ||||||||||| | |||| |||||||| |||| Sbjct: 301 accatcgcccaaggtggtgtcctccccaacatccaggctgtccttctccccaaga 355
>ref|XM_789645.1| PREDICTED: Strongylocentrotus purpuratus similar to histone H2A (LOC590023), mRNA Length = 392 Score = 46.1 bits (23), Expect = 0.008 Identities = 47/55 (85%) Strand = Plus / Plus Query: 4 accatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 ||||||||||| || |||||| ||||||||||| | |||| |||||||| |||| Sbjct: 301 accatcgcccaaggtggtgtcctccccaacatccaggctgtccttctccccaaga 355
>ref|XM_781115.1| PREDICTED: Strongylocentrotus purpuratus similar to H2A histone family, member X (LOC581096), mRNA Length = 378 Score = 46.1 bits (23), Expect = 0.008 Identities = 47/55 (85%) Strand = Plus / Plus Query: 4 accatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 ||||||||||| || |||||| ||||||||||| | |||| |||||||| |||| Sbjct: 301 accatcgcccaaggtggtgtcctccccaacatccaggctgtccttctccccaaga 355
>gb|BT016301.1| Zea mays clone Contig134 mRNA sequence Length = 846 Score = 44.1 bits (22), Expect = 0.034 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 ||||||||||| |||||||| || | |||||||||||| |||| || ||||| |||| Sbjct: 338 gtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctccccaaga 395
>ref|XM_785005.1| PREDICTED: Strongylocentrotus purpuratus similar to CG31618-PA (LOC585168), mRNA Length = 381 Score = 44.1 bits (22), Expect = 0.034 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 |||||||||||||| || || ||| ||||||||||| | |||| |||||||| |||| Sbjct: 301 gtcaccatcgcccagggtggcgtcctccccaacatccaggctgtccttctccccaaga 358
>gb|AY104486.1| Zea mays PCO109435 mRNA sequence Length = 992 Score = 44.1 bits (22), Expect = 0.034 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 ||||||||||| |||||||| || | |||||||||||| |||| || ||||| |||| Sbjct: 409 gtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctccccaaga 466
>gb|M11085.1|SUPHIS2A2 Sea urchin (P.miliaris) late histone H2A-2 late mRNA, complete cds Length = 430 Score = 44.1 bits (22), Expect = 0.034 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 ||||||||||| || || |||||| ||||||||||| | |||| |||||||| |||| Sbjct: 313 gtcaccatcgctcagggtggtgtcctccccaacatccaggctgtccttctccccaaga 370
>gb|BT019315.1| Zea mays clone Contig989.F mRNA sequence Length = 699 Score = 42.1 bits (21), Expect = 0.13 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactc 41 ||||||||||| ||||| || ||| ||||||||||| |||| Sbjct: 402 gtcaccatcgcgcacggtggcgtcctccccaacatccactc 442
>ref|XM_785689.1| PREDICTED: Strongylocentrotus purpuratus similar to histone H2A (LOC585884), partial mRNA Length = 366 Score = 42.1 bits (21), Expect = 0.13 Identities = 30/33 (90%) Strand = Plus / Plus Query: 4 accatcgcccacggcggtgtcatccccaacatc 36 ||||||||||| || |||||| ||||||||||| Sbjct: 301 accatcgcccaaggtggtgtcctccccaacatc 333
>gb|BT019008.1| Zea mays clone Contig499.F mRNA sequence Length = 674 Score = 40.1 bits (20), Expect = 0.52 Identities = 32/36 (88%) Strand = Plus / Plus Query: 4 accatcgcccacggcggtgtcatccccaacatcaac 39 ||||||||||||||||| || | |||||||||||| Sbjct: 394 accatcgcccacggcggcgtgttgcccaacatcaac 429
>ref|XM_869001.1| PREDICTED: Bos taurus similar to Histone H2A.1 (LOC616875), mRNA Length = 449 Score = 40.1 bits (20), Expect = 0.52 Identities = 32/36 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatc 36 |||||||||||||| || |||||| | ||||||||| Sbjct: 302 gtcaccatcgcccagggtggtgtcctgcccaacatc 337
>ref|XM_655341.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2829.2), mRNA Length = 1617 Score = 40.1 bits (20), Expect = 0.52 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 caacatcaactctgttcttc 49 |||||||||||||||||||| Sbjct: 1324 caacatcaactctgttcttc 1305
>ref|XM_906200.1| PREDICTED: Mus musculus similar to histone H2A (LOC621893), mRNA Length = 393 Score = 40.1 bits (20), Expect = 0.52 Identities = 29/32 (90%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaa 32 |||||||||||||| ||||| ||| ||||||| Sbjct: 301 gtcaccatcgcccagggcggggtcctccccaa 332
>ref|XM_886305.1| PREDICTED: Mus musculus similar to histone H2A (LOC621893), mRNA Length = 393 Score = 40.1 bits (20), Expect = 0.52 Identities = 29/32 (90%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaa 32 |||||||||||||| ||||| ||| ||||||| Sbjct: 301 gtcaccatcgcccagggcggggtcctccccaa 332
>ref|XM_540292.2| PREDICTED: Canis familiaris similar to histone 2, H2ac (LOC483174), mRNA Length = 485 Score = 40.1 bits (20), Expect = 0.52 Identities = 32/36 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatc 36 |||||||||||||| ||||| ||| | ||||||||| Sbjct: 358 gtcaccatcgcccagggcggcgtcctgcccaacatc 393
>ref|XM_845715.1| PREDICTED: Canis familiaris similar to Histone H2A.o (H2A/o) (H2A.2) (H2a-615) (LOC608631), mRNA Length = 534 Score = 40.1 bits (20), Expect = 0.52 Identities = 32/36 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatc 36 |||||||||||||| ||||| ||| | ||||||||| Sbjct: 336 gtcaccatcgcccagggcggcgtcctgcccaacatc 371
>ref|XM_540286.2| PREDICTED: Canis familiaris similar to Histone H2A.o (H2A/o) (H2A.2) (H2a-615) (LOC483168), mRNA Length = 534 Score = 40.1 bits (20), Expect = 0.52 Identities = 32/36 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatc 36 |||||||||||||| ||||| ||| | ||||||||| Sbjct: 336 gtcaccatcgcccagggcggcgtcctgcccaacatc 371
>gb|AY158922.2| Mus musculus histone protein Hist2h2ab gene, complete cds Length = 1680 Score = 40.1 bits (20), Expect = 0.52 Identities = 29/32 (90%) Strand = Plus / Minus Query: 1 gtcaccatcgcccacggcggtgtcatccccaa 32 |||||||||||||| ||||| ||| ||||||| Sbjct: 837 gtcaccatcgcccagggcggggtcctccccaa 806
>ref|XM_785424.1| PREDICTED: Strongylocentrotus purpuratus histone H2a-beta (LOC373352), mRNA Length = 378 Score = 40.1 bits (20), Expect = 0.52 Identities = 32/36 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatc 36 |||||||| ||||| || |||||| ||||||||||| Sbjct: 298 gtcaccattgcccagggtggtgtcctccccaacatc 333
>emb|Y15320.1|ANHTTA Aspergillus niger mRNA for histone H2A Length = 515 Score = 40.1 bits (20), Expect = 0.52 Identities = 32/36 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatc 36 |||||||| ||||| || |||||| ||||||||||| Sbjct: 311 gtcaccattgcccagggtggtgtcctccccaacatc 346
>gb|AF255740.1|AF255740 Bufo bufo gagarizans histone H1 (H1) and histone H2A variant (H2AInr) genes, complete cds Length = 2396 Score = 40.1 bits (20), Expect = 0.52 Identities = 32/36 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatc 36 |||||||||||||| ||||| ||| | ||||||||| Sbjct: 1525 gtcaccatcgcccagggcggcgtcctgcccaacatc 1560
>gb|U62673.1|MMU62673 Mus musculus histone H2a(A)-613, histone H2a(B)-613, and histone H2b-613 (H2b) genes, complete cds Length = 2618 Score = 40.1 bits (20), Expect = 0.52 Identities = 29/32 (90%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaa 32 |||||||||||||| ||||| ||| ||||||| Sbjct: 964 gtcaccatcgcccagggcggggtcctccccaa 995
>gb|AF349514.1|AF349514 Aspergillus nidulans general amidase-C (gmdC) gene, complete cds Length = 2612 Score = 40.1 bits (20), Expect = 0.52 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 caacatcaactctgttcttc 49 |||||||||||||||||||| Sbjct: 1529 caacatcaactctgttcttc 1510
>gb|AY158923.1| Mus musculus histone protein Hist2h2ac gene, complete cds Length = 1200 Score = 40.1 bits (20), Expect = 0.52 Identities = 29/32 (90%) Strand = Plus / Minus Query: 1 gtcaccatcgcccacggcggtgtcatccccaa 32 |||||||||||||| ||||| ||| ||||||| Sbjct: 937 gtcaccatcgcccagggcggggtcctccccaa 906
>emb|BX284682.7| Zebrafish DNA sequence from clone DKEYP-74C5 in linkage group 22, complete sequence Length = 206289 Score = 40.1 bits (20), Expect = 0.52 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 caacatcaactctgttcttctccc 53 ||||||| |||||||||||||||| Sbjct: 179452 caacatctactctgttcttctccc 179429
>gb|AC093350.15| Mus musculus chromosome 3, clone RP23-16G3, complete sequence Length = 200326 Score = 40.1 bits (20), Expect = 0.52 Identities = 29/32 (90%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaa 32 |||||||||||||| ||||| ||| ||||||| Sbjct: 44855 gtcaccatcgcccagggcggggtcctccccaa 44886
>dbj|D38089.1|WHTPH2AC Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-4 Length = 725 Score = 40.1 bits (20), Expect = 0.52 Identities = 32/36 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatc 36 ||||| |||||| |||||||||||| ||||||||| Sbjct: 386 gtcacaatcgccagcggcggtgtcatgcccaacatc 421
>gb|AC125099.3| Mus musculus BAC clone RP24-201C14 from 3, complete sequence Length = 166720 Score = 40.1 bits (20), Expect = 0.52 Identities = 29/32 (90%) Strand = Plus / Minus Query: 1 gtcaccatcgcccacggcggtgtcatccccaa 32 |||||||||||||| ||||| ||| ||||||| Sbjct: 55838 gtcaccatcgcccagggcggggtcctccccaa 55807
>gb|M11084.1|SUPHIS2A1 Sea urchin (P.miliaris) late histone H2A-1 late mRNA, complete cds Length = 465 Score = 40.1 bits (20), Expect = 0.52 Identities = 32/36 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatc 36 ||||||||||| || || |||||| ||||||||||| Sbjct: 339 gtcaccatcgctcagggtggtgtcctccccaacatc 374
>gb|M14140.1|SUPH2B2 P.miliaris histone H2A-2.1 gene, complete cds Length = 375 Score = 40.1 bits (20), Expect = 0.52 Identities = 32/36 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatc 36 ||||||||||| || || |||||| ||||||||||| Sbjct: 298 gtcaccatcgctcagggtggtgtcctccccaacatc 333
>gb|M14141.1|SUPH2A2 P.miliaris histone H2A-2.2 gene, complete cds Length = 375 Score = 40.1 bits (20), Expect = 0.52 Identities = 32/36 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatc 36 ||||||||||| || || |||||| ||||||||||| Sbjct: 298 gtcaccatcgctcagggtggtgtcctccccaacatc 333
>ref|NM_125380.2| Arabidopsis thaliana DNA binding AT5G59870 mRNA, complete cds Length = 750 Score = 38.2 bits (19), Expect = 2.1 Identities = 40/47 (85%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttct 47 ||||| ||||| ||||| ||||| | || ||||||||||||||||| Sbjct: 402 gtcacaatcgctcacggtggtgttttgcctaacatcaactctgttct 448
>ref|XM_475374.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 492 Score = 38.2 bits (19), Expect = 2.1 Identities = 34/39 (87%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaac 39 ||||||||||| |||||||| || | |||||||||||| Sbjct: 334 gtcaccatcgcgcacggcggggtgctgcccaacatcaac 372
>ref|XM_527272.1| PREDICTED: Pan troglodytes similar to Histone H2A.1 (LOC471894), mRNA Length = 372 Score = 38.2 bits (19), Expect = 2.1 Identities = 31/35 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacat 35 ||||||||||| || ||||||||| | |||||||| Sbjct: 280 gtcaccatcgcacagggcggtgtcctgcccaacat 314
>ref|XM_527249.1| PREDICTED: Pan troglodytes similar to H2A histone family, member P (LOC471871), mRNA Length = 660 Score = 38.2 bits (19), Expect = 2.1 Identities = 31/35 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacat 35 ||||||||||| || ||||||||| | |||||||| Sbjct: 463 gtcaccatcgcgcagggcggtgtcctgcccaacat 497
>ref|XM_477729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 390 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 acggcggtgtcatccccaa 32 ||||||||||||||||||| Sbjct: 194 acggcggtgtcatccccaa 176
>ref|NM_006632.1| Homo sapiens solute carrier family 17 (sodium phosphate), member 3 (SLC17A3), mRNA Length = 1795 Score = 38.2 bits (19), Expect = 2.1 Identities = 31/35 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacat 35 ||||||||||| || ||||||||| | |||||||| Sbjct: 202 gtcaccatcgcgcagggcggtgtcctgcccaacat 236
>gb|BT017719.1| Zea mays clone EL01N0447A04.c mRNA sequence Length = 772 Score = 38.2 bits (19), Expect = 2.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgt 23 ||||||||||| ||||||||||| Sbjct: 390 gtcaccatcgcgcacggcggtgt 412
>gb|BC016677.1| Homo sapiens histone 1, H2ag, mRNA (cDNA clone MGC:17204 IMAGE:4342191), complete cds Length = 2256 Score = 38.2 bits (19), Expect = 2.1 Identities = 31/35 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacat 35 ||||||||||| || ||||||||| | |||||||| Sbjct: 320 gtcaccatcgcacagggcggtgtcctgcccaacat 354
>gb|BC067782.1| Homo sapiens histone 1, H2ag, mRNA (cDNA clone IMAGE:5314244), partial cds Length = 2270 Score = 38.2 bits (19), Expect = 2.1 Identities = 31/35 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacat 35 ||||||||||| || ||||||||| | |||||||| Sbjct: 331 gtcaccatcgcacagggcggtgtcctgcccaacat 365
>gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1525_A02, complete sequence Length = 93826 Score = 38.2 bits (19), Expect = 2.1 Identities = 34/39 (87%) Strand = Plus / Minus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaac 39 ||||||||||| |||||||| || | |||||||||||| Sbjct: 7436 gtcaccatcgcgcacggcggggtgctgcccaacatcaac 7398
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 38.2 bits (19), Expect = 2.1 Identities = 34/39 (87%) Strand = Plus / Minus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaac 39 ||||||||||| |||||||| || | |||||||||||| Sbjct: 101793 gtcaccatcgcgcacggcggggtgctgcccaacatcaac 101755
>ref|NM_021064.3| Homo sapiens histone 1, H2ag (HIST1H2AG), mRNA Length = 2267 Score = 38.2 bits (19), Expect = 2.1 Identities = 31/35 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacat 35 ||||||||||| || ||||||||| | |||||||| Sbjct: 331 gtcaccatcgcacagggcggtgtcctgcccaacat 365
>ref|XM_568808.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNB01360) partial mRNA Length = 1400 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 33 catcaactctgttcttctc 51 ||||||||||||||||||| Sbjct: 554 catcaactctgttcttctc 536
>emb|AL138726.12| Human DNA sequence from clone RP1-139G21 on chromosome 6 Contains (part of) the SLC17A1, SLC17A2 and SLC17A3 genes for the sodium phosphate solute carrier family 17 members 1, 2 and 3 and a H2A (histone 2A) pseudogene, complete sequence Length = 136646 Score = 38.2 bits (19), Expect = 2.1 Identities = 31/35 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacat 35 ||||||||||| || ||||||||| | |||||||| Sbjct: 45385 gtcaccatcgcgcagggcggtgtcctgcccaacat 45419
>emb|AL021807.2|HS86C11 Human DNA sequence from clone RP1-86C11 on chromosome 6p21.31-22.1 Contains a vomeronasal olfactory 1 receptor chromosome 6-2 (VN1R6-2P) pseudogene, histone genes H2BFN and H2AFA, the gene for a novel protein identical to H2B histone family member A (H2BFA), the gene for a novel protein identical to H2A histone family member I (H2AFI), a novel histone gene similar to H4F2 and three CpG islands, complete sequence Length = 89016 Score = 38.2 bits (19), Expect = 2.1 Identities = 31/35 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacat 35 ||||||||||| || ||||||||| | |||||||| Sbjct: 56677 gtcaccatcgcacagggcggtgtcctgcccaacat 56711
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 33 catcaactctgttcttctc 51 ||||||||||||||||||| Sbjct: 407869 catcaactctgttcttctc 407851
>gb|AF098457.1|AF098457 Homo sapiens H2A/t pseudogene, complete sequence Length = 1545 Score = 38.2 bits (19), Expect = 2.1 Identities = 31/35 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacat 35 ||||||||||| || ||||||||| | |||||||| Sbjct: 556 gtcaccatcgcgcagggcggtgtcctgcccaacat 590
>gb|U90545.1|HSU90545 Human sodium phosphate transporter (NPT4) mRNA, complete cds Length = 1795 Score = 38.2 bits (19), Expect = 2.1 Identities = 31/35 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacat 35 ||||||||||| || ||||||||| | |||||||| Sbjct: 202 gtcaccatcgcgcagggcggtgtcctgcccaacat 236
>gb|DQ370422.1| Gateway adapted binary vector pCGTAG, complete sequence Length = 12907 Score = 38.2 bits (19), Expect = 2.1 Identities = 40/47 (85%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttct 47 ||||| ||||| ||||| ||||| | || ||||||||||||||||| Sbjct: 2178 gtcacaatcgctcacggtggtgttttgcctaacatcaactctgttct 2224
>gb|DQ370421.1| Gateway adapted binary vector pFYTAG, complete sequence Length = 11166 Score = 38.2 bits (19), Expect = 2.1 Identities = 40/47 (85%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttct 47 ||||| ||||| ||||| ||||| | || ||||||||||||||||| Sbjct: 8695 gtcacaatcgctcacggtggtgttttgcctaacatcaactctgttct 8741
>ref|NG_002685.1| Homo sapiens histone 1, H2a, pseudogene 2 (HIST1H2APS2) on chromosome 6 Length = 491 Score = 38.2 bits (19), Expect = 2.1 Identities = 31/35 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacat 35 ||||||||||| || ||||||||| | |||||||| Sbjct: 299 gtcaccatcgcgcagggcggtgtcctgcccaacat 333
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 acggcggtgtcatccccaa 32 ||||||||||||||||||| Sbjct: 13566389 acggcggtgtcatccccaa 13566371
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 2.1 Identities = 34/39 (87%) Strand = Plus / Minus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaac 39 ||||||||||| |||||||| || | |||||||||||| Sbjct: 22512386 gtcaccatcgcgcacggcggggtgctgcccaacatcaac 22512348 Score = 36.2 bits (18), Expect = 8.2 Identities = 48/58 (82%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 ||||||||||| |||||||| || | || ||||||||| | || || |||||||||| Sbjct: 707345 gtcaccatcgcgcacggcggcgtgctgccgaacatcaacccggtgctgctcccgaaga 707402
>gb|AC139698.6| Homo sapiens 3 BAC RP11-766K19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 35402 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 ccccaacatcaactctgtt 45 ||||||||||||||||||| Sbjct: 8513 ccccaacatcaactctgtt 8531
>gb|BT003669.1| Arabidopsis thaliana At5g59870 mRNA, complete cds Length = 453 Score = 38.2 bits (19), Expect = 2.1 Identities = 40/47 (85%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttct 47 ||||| ||||| ||||| ||||| | || ||||||||||||||||| Sbjct: 328 gtcacaatcgctcacggtggtgttttgcctaacatcaactctgttct 374
>gb|AY085948.1| Arabidopsis thaliana clone 20036 mRNA, complete sequence Length = 649 Score = 38.2 bits (19), Expect = 2.1 Identities = 40/47 (85%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttct 47 ||||| ||||| ||||| ||||| | || ||||||||||||||||| Sbjct: 404 gtcacaatcgctcacggtggtgttttgcctaacatcaactctgttct 450
>gb|AY131987.1| Homo sapiens histone H2A (HIST1H2AG) gene, complete cds Length = 1173 Score = 38.2 bits (19), Expect = 2.1 Identities = 31/35 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacat 35 ||||||||||| || ||||||||| | |||||||| Sbjct: 693 gtcaccatcgcacagggcggtgtcctgcccaacat 727
>dbj|AP005248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0084P08 Length = 158656 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 acggcggtgtcatccccaa 32 ||||||||||||||||||| Sbjct: 34008 acggcggtgtcatccccaa 33990
>dbj|AK117890.1| Arabidopsis thaliana At5g59870 mRNA for putative histone H2A, complete cds, clone: RAFL19-06-N22 Length = 745 Score = 38.2 bits (19), Expect = 2.1 Identities = 40/47 (85%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttct 47 ||||| ||||| ||||| ||||| | || ||||||||||||||||| Sbjct: 397 gtcacaatcgctcacggtggtgttttgcctaacatcaactctgttct 443
>dbj|AB015475.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMN10 Length = 84325 Score = 38.2 bits (19), Expect = 2.1 Identities = 40/47 (85%) Strand = Plus / Minus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttct 47 ||||| ||||| ||||| ||||| | || ||||||||||||||||| Sbjct: 29197 gtcacaatcgctcacggtggtgttttgcctaacatcaactctgttct 29151
>dbj|AK099763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094K03, full insert sequence Length = 912 Score = 38.2 bits (19), Expect = 2.1 Identities = 34/39 (87%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaac 39 ||||||||||| |||||||| || | |||||||||||| Sbjct: 404 gtcaccatcgcgcacggcggggtgctgcccaacatcaac 442
>emb|Z65161.1|HS21G2F H.sapiens CpG island DNA genomic Mse1 fragment, clone 21g2, forward read cpg21g2.ft1b Length = 274 Score = 38.2 bits (19), Expect = 2.1 Identities = 31/35 (88%) Strand = Plus / Minus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacat 35 ||||||||||| || ||||||||| | |||||||| Sbjct: 185 gtcaccatcgcacagggcggtgtcctgcccaacat 151
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 38.2 bits (19), Expect = 2.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 tcaccatcgcccacggcgg 20 ||||||||||||||||||| Sbjct: 2600568 tcaccatcgcccacggcgg 2600586
>dbj|AK067406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N23, full insert sequence Length = 1097 Score = 38.2 bits (19), Expect = 2.1 Identities = 34/39 (87%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaac 39 ||||||||||| |||||||| || | |||||||||||| Sbjct: 405 gtcaccatcgcgcacggcggggtgctgcccaacatcaac 443
>gb|L19778.1|HUMH2A1B Homo sapiens histone H2A.1b mRNA, complete cds Length = 2250 Score = 38.2 bits (19), Expect = 2.1 Identities = 31/35 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacat 35 ||||||||||| || ||||||||| | |||||||| Sbjct: 331 gtcaccatcgcacagggcggtgtcctgcccaacat 365
>ref|NG_000827.2| Homo sapiens genomic histone family microcluster (HFM@) on chromosome 6 Length = 20621 Score = 38.2 bits (19), Expect = 2.1 Identities = 31/35 (88%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacat 35 ||||||||||| || ||||||||| | |||||||| Sbjct: 5878 gtcaccatcgcacagggcggtgtcctgcccaacat 5912
>ref|XM_475081.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 522 Score = 36.2 bits (18), Expect = 8.2 Identities = 48/58 (82%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 ||||||||||| |||||||| || | || ||||||||| | || || |||||||||| Sbjct: 382 gtcaccatcgcgcacggcggcgtgctgccgaacatcaacccggtgctgctcccgaaga 439
>gb|AC182584.3| Pan troglodytes BAC clone CH251-530K15 from chromosome 2, complete sequence Length = 206103 Score = 36.2 bits (18), Expect = 8.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 23 tcatccccaacatcaactctgt 44 ||||||||||||| |||||||| Sbjct: 133627 tcatccccaacataaactctgt 133606
>gb|AC185139.2| Pan troglodytes BAC clone CH251-174C16 from chromosome 2, complete sequence Length = 166804 Score = 36.2 bits (18), Expect = 8.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 23 tcatccccaacatcaactctgt 44 ||||||||||||| |||||||| Sbjct: 22129 tcatccccaacataaactctgt 22108
>ref|NM_130440.1| Homo sapiens protein tyrosine phosphatase, receptor type, F (PTPRF), transcript variant 2, mRNA Length = 7691 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ccatcgcccacggcggtg 22 |||||||||||||||||| Sbjct: 1830 ccatcgcccacggcggtg 1813
>ref|NM_002840.2| Homo sapiens protein tyrosine phosphatase, receptor type, F (PTPRF), transcript variant 1, mRNA Length = 7718 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ccatcgcccacggcggtg 22 |||||||||||||||||| Sbjct: 1830 ccatcgcccacggcggtg 1813
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 24 catccccaacatcaactc 41 |||||||||||||||||| Sbjct: 2534831 catccccaacatcaactc 2534814
>gb|AF165424.6| Homo sapiens chromosome 8 clone CTB-402F2 map q21.3, complete sequence Length = 111736 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 28 cccaacatcaactctgtt 45 |||||||||||||||||| Sbjct: 64934 cccaacatcaactctgtt 64917
>gb|BC068823.1| Xenopus laevis cDNA clone IMAGE:6635737, partial cds Length = 763 Score = 36.2 bits (18), Expect = 8.2 Identities = 48/58 (82%) Strand = Plus / Minus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 |||||||||||||| ||||| || | ||||||||| | ||||| || ||||| |||| Sbjct: 348 gtcaccatcgcccagggcggggttctgcccaacatccagtctgtgctgctccccaaga 291
>emb|CT025636.2| Pan troglodytes chromosome X clone RP43-029M22 map Xq28, complete sequence Length = 176404 Score = 36.2 bits (18), Expect = 8.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 22 gtcatccccaacatcaactctg 43 |||||||||||||| ||||||| Sbjct: 15164 gtcatccccaacataaactctg 15143
>gb|AC004533.1|HUAC004533 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-301G4, complete sequence Length = 110209 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 33 catcaactctgttcttct 50 |||||||||||||||||| Sbjct: 8957 catcaactctgttcttct 8940
>gb|AC109131.8| Homo sapiens 3 BAC RP11-296J4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 118621 Score = 36.2 bits (18), Expect = 8.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 23 tcatccccaacatcaactctgt 44 ||||||| |||||||||||||| Sbjct: 92953 tcatccctaacatcaactctgt 92932
>ref|XM_723867.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01234) partial mRNA Length = 10872 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 23 tcatccccaacatcaact 40 |||||||||||||||||| Sbjct: 3140 tcatccccaacatcaact 3123
>gb|BC048768.1| Homo sapiens protein tyrosine phosphatase, receptor type, F, mRNA (cDNA clone MGC:47527 IMAGE:5502598), complete cds Length = 6412 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ccatcgcccacggcggtg 22 |||||||||||||||||| Sbjct: 1816 ccatcgcccacggcggtg 1799
>ref|XM_734540.1| Plasmodium chabaudi chabaudi hypothetical protein (PC100812.00.0) partial mRNA Length = 1452 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 23 tcatccccaacatcaact 40 |||||||||||||||||| Sbjct: 563 tcatccccaacatcaact 546
>gb|AC153143.4| Mus musculus BAC clone RP23-241N10 from chromosome 13, complete sequence Length = 207860 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 38 actctgttcttctcccga 55 |||||||||||||||||| Sbjct: 106819 actctgttcttctcccga 106836
>emb|Z93096.1|HS390B3 Human DNA sequence from clone CTA-390B3 on chromosome 22q12-13, complete sequence Length = 92510 Score = 36.2 bits (18), Expect = 8.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 23 tcatccccaacatcaactctgt 44 ||||||||||||| |||||||| Sbjct: 41099 tcatccccaacataaactctgt 41078
>emb|AL772370.7| Human DNA sequence from clone RP11-184B10 on chromosome X Contains the 5' end of the SMPX gene for X-linked small muscle protein, complete sequence Length = 104749 Score = 36.2 bits (18), Expect = 8.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 22 gtcatccccaacatcaactctg 43 |||||||||||||| ||||||| Sbjct: 73928 gtcatccccaacataaactctg 73907
>emb|X73368.1|STMIAE S.typhimurium genes miaE, argI (partial) and orf's Length = 4531 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 2 tcaccatcgcccacggcg 19 |||||||||||||||||| Sbjct: 3732 tcaccatcgcccacggcg 3715
>gb|AE008910.1| Salmonella typhimurium LT2, section 214 of 220 of the complete genome Length = 20648 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 2 tcaccatcgcccacggcg 19 |||||||||||||||||| Sbjct: 923 tcaccatcgcccacggcg 906
>gb|AC163438.3| Mus musculus chromosome 8, clone RP23-278M23, complete sequence Length = 186102 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 33 catcaactctgttcttct 50 |||||||||||||||||| Sbjct: 13249 catcaactctgttcttct 13232
>emb|AL627283.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 19/20 Length = 249050 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 2 tcaccatcgcccacggcg 19 |||||||||||||||||| Sbjct: 199916 tcaccatcgcccacggcg 199899
>emb|CR858507.1| Pongo pygmaeus mRNA; cDNA DKFZp469M1826 (from clone DKFZp469M1826) Length = 3435 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 21 tgtcatccccaacatcaa 38 |||||||||||||||||| Sbjct: 898 tgtcatccccaacatcaa 915
>gb|AE014179.1| Mus musculus piebald deletion region section 7 of 11 of the complete sequence Length = 400029 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 36 caactctgttcttctccc 53 |||||||||||||||||| Sbjct: 266425 caactctgttcttctccc 266442
>gb|AC183099.3| Pan troglodytes BAC clone CH251-727F5 from chromosome 2, complete sequence Length = 183714 Score = 36.2 bits (18), Expect = 8.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 23 tcatccccaacatcaactctgt 44 ||||||||||||| |||||||| Sbjct: 89972 tcatccccaacataaactctgt 89951
>dbj|AK125325.1| Homo sapiens cDNA FLJ43335 fis, clone NT2RI3006673, highly similar to LAR protein precursor Length = 4836 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ccatcgcccacggcggtg 22 |||||||||||||||||| Sbjct: 63 ccatcgcccacggcggtg 46
>gb|AC103760.2| Homo sapiens chromosome 8, clone CTD-2284J15, complete sequence Length = 112655 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 28 cccaacatcaactctgtt 45 |||||||||||||||||| Sbjct: 58292 cccaacatcaactctgtt 58309
>gb|AC092815.2| Homo sapiens chromosome 1 clone RP5-1029K14, complete sequence Length = 126651 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 ccatcgcccacggcggtg 22 |||||||||||||||||| Sbjct: 93151 ccatcgcccacggcggtg 93168
>gb|AC093166.6| Homo sapiens BAC clone RP11-1429F20 from 2, complete sequence Length = 213865 Score = 36.2 bits (18), Expect = 8.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 23 tcatccccaacatcaactctgt 44 ||||||||||||| |||||||| Sbjct: 158299 tcatccccaacataaactctgt 158278
>gb|AC022039.7| Homo sapiens chromosome 8, clone RP11-3G21, complete sequence Length = 176815 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 31 aacatcaactctgttctt 48 |||||||||||||||||| Sbjct: 97649 aacatcaactctgttctt 97632
>gb|AC117381.5| Homo sapiens 3 BAC RP11-783D3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 205933 Score = 36.2 bits (18), Expect = 8.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 23 tcatccccaacatcaactctgt 44 ||||||||||||| |||||||| Sbjct: 108844 tcatccccaacatgaactctgt 108823
>gb|AC092651.3| Homo sapiens BAC clone RP11-431O23 from 2, complete sequence Length = 96153 Score = 36.2 bits (18), Expect = 8.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 23 tcatccccaacatcaactctgt 44 ||||||||||||| |||||||| Sbjct: 74652 tcatccccaacataaactctgt 74673
>gb|AC092131.5| Homo sapiens chromosome 16 clone RP11-164F14, complete sequence Length = 168624 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 33 catcaactctgttcttct 50 |||||||||||||||||| Sbjct: 1722 catcaactctgttcttct 1739
>gb|AF211186.2|AF211186 Gorilla gorilla growth hormone receptor (GHR) gene, partial cds Length = 4044 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 27 ccccaacatcaactctgt 44 |||||||||||||||||| Sbjct: 2678 ccccaacatcaactctgt 2695
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 2 tcaccatcgcccacggcg 19 |||||||||||||||||| Sbjct: 4445901 tcaccatcgcccacggcg 4445884
>gb|AC093616.5| Homo sapiens BAC clone RP13-511M20 from 2, complete sequence Length = 192494 Score = 36.2 bits (18), Expect = 8.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 23 tcatccccaacatcaactctgt 44 ||||||||||||| |||||||| Sbjct: 55113 tcatccccaacataaactctgt 55134
>gb|AF209083.1|AF209083 Cercopithecus aethiops growth hormone receptor (GHR) gene, partial cds Length = 3701 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 27 ccccaacatcaactctgt 44 |||||||||||||||||| Sbjct: 2647 ccccaacatcaactctgt 2664
>gb|AF209081.1|AF209081 Macaca mulatta growth hormone receptor (GHR) gene, partial cds Length = 3509 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 27 ccccaacatcaactctgt 44 |||||||||||||||||| Sbjct: 2475 ccccaacatcaactctgt 2492
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 atcgcccacggcggtgtc 24 |||||||||||||||||| Sbjct: 5253315 atcgcccacggcggtgtc 5253332
>dbj|AB177857.1| Homo sapiens mRNA for LAR Length = 7673 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ccatcgcccacggcggtg 22 |||||||||||||||||| Sbjct: 1805 ccatcgcccacggcggtg 1788
>gb|AC109146.26| Mus musculus chromosome 8, clone RP23-54G23, complete sequence Length = 197868 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 33 catcaactctgttcttct 50 |||||||||||||||||| Sbjct: 104531 catcaactctgttcttct 104514
>dbj|AK130630.1| Homo sapiens cDNA FLJ27120 fis, clone SPL06640 Length = 1875 Score = 36.2 bits (18), Expect = 8.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 23 tcatccccaacatcaactctgt 44 ||||||||||||| |||||||| Sbjct: 1428 tcatccccaacatgaactctgt 1449
>dbj|AK074018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075N03, full insert sequence Length = 797 Score = 36.2 bits (18), Expect = 8.2 Identities = 48/58 (82%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 ||||||||||| |||||||| || | || ||||||||| | || || |||||||||| Sbjct: 408 gtcaccatcgcgcacggcggcgtgctgccgaacatcaacccggtgctgctcccgaaga 465
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 24 catccccaacatcaactc 41 |||||||||||||||||| Sbjct: 1815938 catccccaacatcaactc 1815921
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 2 tcaccatcgcccacggcg 19 |||||||||||||||||| Sbjct: 4654805 tcaccatcgcccacggcg 4654788
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 2 tcaccatcgcccacggcg 19 |||||||||||||||||| Sbjct: 4629781 tcaccatcgcccacggcg 4629764
>gb|AC131029.6| Mus musculus chromosome 14, clone RP23-304N24, complete sequence Length = 239588 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 36 caactctgttcttctccc 53 |||||||||||||||||| Sbjct: 82587 caactctgttcttctccc 82570
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 atcgcccacggcggtgtc 24 |||||||||||||||||| Sbjct: 2438842 atcgcccacggcggtgtc 2438825 Score = 36.2 bits (18), Expect = 8.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 7 atcgcccacggcggtgtcatcc 28 ||||||||||||||| |||||| Sbjct: 2401600 atcgcccacggcggtatcatcc 2401579
>gb|AC135119.4| Mus musculus BAC clone RP24-535H19 from 14, complete sequence Length = 179520 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 36 caactctgttcttctccc 53 |||||||||||||||||| Sbjct: 161369 caactctgttcttctccc 161386
>gb|AF007904.1|CVHIST2 Chaetopterus variopedatus histone H4 and histone H2A genes, complete cds Length = 1849 Score = 36.2 bits (18), Expect = 8.2 Identities = 48/58 (82%) Strand = Plus / Minus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 ||||||||||| || |||||||| |||| |||||| | |||| |||||||| |||| Sbjct: 1416 gtcaccatcgcacaaggcggtgtactccctaacatccaggctgtgcttctcccaaaga 1359
>gb|AC002128.1|AC002128 Human DNA from chromosome 19 cosmid F19410, genomic sequence, complete sequence Length = 45328 Score = 36.2 bits (18), Expect = 8.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 23 tcatccccaacatcaactctgt 44 ||||||||||||| |||||||| Sbjct: 28804 tcatccccaacataaactctgt 28783
>dbj|AB209478.1| Homo sapiens mRNA for protein tyrosine phosphatase, receptor type, F isoform 2 precursor variant protein Length = 6309 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ccatcgcccacggcggtg 22 |||||||||||||||||| Sbjct: 460 ccatcgcccacggcggtg 443
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 36.2 bits (18), Expect = 8.2 Identities = 48/58 (82%) Strand = Plus / Plus Query: 1 gtcaccatcgcccacggcggtgtcatccccaacatcaactctgttcttctcccgaaga 58 ||||||||||| |||||||| || | || ||||||||| | || || |||||||||| Sbjct: 52544 gtcaccatcgcgcacggcggcgtgctgccgaacatcaacccggtgctgctcccgaaga 52601
>emb|Y00815.1|HSLARR Human mRNA for LCA-homolog. LAR protein (leukocyte antigen related) Length = 7702 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 ccatcgcccacggcggtg 22 |||||||||||||||||| Sbjct: 1830 ccatcgcccacggcggtg 1813
>dbj|AP003115.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1000E4 Length = 115937 Score = 36.2 bits (18), Expect = 8.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 36 caactctgttcttctccc 53 |||||||||||||||||| Sbjct: 96041 caactctgttcttctccc 96058 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 383,533 Number of Sequences: 3902068 Number of extensions: 383533 Number of successful extensions: 28156 Number of sequences better than 10.0: 143 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 27841 Number of HSP's gapped (non-prelim): 316 length of query: 58 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 37 effective length of database: 17,151,101,840 effective search space: 634590768080 effective search space used: 634590768080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)
