ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart54g07 |
|---|---|
| Clone Library Name | barley_pub |
>GAL1_CANAL (P56091) Galactokinase (EC 2.7.1.6) (Galactose kinase)| Length = 515 Score = 33.5 bits (75), Expect = 0.46 Identities = 16/54 (29%), Positives = 29/54 (53%) Frame = +1 Query: 421 VFHNHCKDNGIALEDKNFTLSYDTNIPRQAGLSGSSAIVCAALSCLIDFYGVRD 582 V +N+ + + + K L++D N+P GLS S+A A+ ++ GV+D Sbjct: 127 VANNYLTEQNLKGQLKGMKLTFDGNVPTGGGLSSSAAFCVASTLAILHANGVKD 180
>GALK1_ARATH (Q9SEE5) Galactokinase (EC 2.7.1.6) (Galactose kinase)| Length = 496 Score = 31.6 bits (70), Expect = 1.8 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = +1 Query: 424 FHNHCKDNGIALEDK-NFTLSYDTNIPRQAGLSGSSAIVCAALSCLIDFYG 573 FH + K G+ L + D +P +GLS S+A VC+A ++ +G Sbjct: 133 FHEYAKSKGVNLGSPVGLDVLVDGIVPTGSGLSSSAAFVCSATIAIMAVFG 183
>PLSC_NEIMA (Q9JU41) 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC| 2.3.1.51) (1-AGP acyltransferase) (1-AGPAT) (Lysophosphatidic acid acyltransferase) (LPAAT) Length = 255 Score = 31.2 bits (69), Expect = 2.3 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = -1 Query: 254 TAKETARPPYTSLGLPRRPTRAYALRSISFSVS-VTITDAA 135 T K TARP Y +GLP R +++ ++ V V + DAA Sbjct: 187 TGKRTARPSYADVGLPTCLWRIVSMKKLTIKVDFVCVADAA 227
>PLSC_NEIGO (Q59601) 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC| 2.3.1.51) (1-AGP acyltransferase) (1-AGPAT) (Lysophosphatidic acid acyltransferase) (LPAAT) Length = 255 Score = 31.2 bits (69), Expect = 2.3 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = -1 Query: 254 TAKETARPPYTSLGLPRRPTRAYALRSISFSVS-VTITDAA 135 T K TARP Y +GLP R +++ ++ V V + DAA Sbjct: 187 TGKRTARPSYADVGLPTCLWRIVSMKKLTIKVDFVCVADAA 227
>GALK2_RAT (Q5XIG6) N-acetylgalactosamine kinase (EC 2.7.1.157) (GalNAc| kinase) (Galactokinase 2) Length = 458 Score = 30.8 bits (68), Expect = 3.0 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +1 Query: 487 DTNIPRQAGLSGSSAIVCAALSCLIDFYGVR 579 D NIP +GLS SSA+VC A + G+R Sbjct: 135 DGNIPPSSGLSSSSALVCCAGLVTLTVLGMR 165
>GALK2_MOUSE (Q68FH4) N-acetylgalactosamine kinase (EC 2.7.1.157) (GalNAc| kinase) (Galactokinase 2) Length = 458 Score = 30.8 bits (68), Expect = 3.0 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +1 Query: 487 DTNIPRQAGLSGSSAIVCAALSCLIDFYGVR 579 D NIP +GLS SSA+VC A + G+R Sbjct: 135 DGNIPPSSGLSSSSALVCCAGLVTLTVLGLR 165
>PLSC_NEIMB (Q9JZ47) 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC| 2.3.1.51) (1-AGP acyltransferase) (1-AGPAT) (Lysophosphatidic acid acyltransferase) (LPAAT) Length = 255 Score = 30.8 bits (68), Expect = 3.0 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = -1 Query: 254 TAKETARPPYTSLGLPRRPTRAYALRSISFSVS-VTITDAA 135 T K TARP Y +GLP R +++ ++ V V + DAA Sbjct: 187 TGKRTARPSYADVGLPTCLWRIVSMKKLTIRVDFVCVADAA 227
>GALK2_PONPY (Q5R6J8) N-acetylgalactosamine kinase (EC 2.7.1.157) (GalNAc| kinase) (Galactokinase 2) Length = 458 Score = 29.6 bits (65), Expect = 6.7 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = +1 Query: 487 DTNIPRQAGLSGSSAIVCAA 546 D NIP +GLS SSA+VC A Sbjct: 135 DGNIPPSSGLSSSSALVCCA 154
>GALK2_HUMAN (Q01415) N-acetylgalactosamine kinase (EC 2.7.1.157) (GalNAc| kinase) (Galactokinase 2) Length = 458 Score = 29.6 bits (65), Expect = 6.7 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = +1 Query: 487 DTNIPRQAGLSGSSAIVCAA 546 D NIP +GLS SSA+VC A Sbjct: 135 DGNIPPSSGLSSSSALVCCA 154 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,157,022 Number of Sequences: 219361 Number of extensions: 613820 Number of successful extensions: 1987 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1967 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1987 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
