Clone Name | bart54f07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | VG50_ICHV1 (Q00130) Hypothetical gene 50 protein | 30 | 2.4 | 2 | NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20) | 29 | 4.1 |
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>VG50_ICHV1 (Q00130) Hypothetical gene 50 protein| Length = 670 Score = 29.6 bits (65), Expect = 2.4 Identities = 11/20 (55%), Positives = 11/20 (55%) Frame = -1 Query: 128 HCRQQGHGHGDGARGSPARH 69 H GHGHG G RG P H Sbjct: 643 HGHGHGHGHGHGGRGPPGGH 662
>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)| Length = 268 Score = 28.9 bits (63), Expect = 4.1 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +1 Query: 22 SPPRTRASSFLSLHHPWRAGLPRAPSPWPWP 114 SPP R+S+ + HP R LP PSP P P Sbjct: 141 SPPTPRSST--PIPHPPRRSLPSPPSPSPSP 169 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,135,532 Number of Sequences: 219361 Number of extensions: 201927 Number of successful extensions: 1042 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 982 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1033 length of database: 80,573,946 effective HSP length: 18 effective length of database: 76,625,448 effective search space used: 1839010752 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)