ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart54f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477795.1| Oryza sativa (japonica cultivar-group), mRNA 192 8e-46
2dbj|AK061408.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 8e-46
3dbj|AK061383.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 8e-46
4dbj|AB037153.1| Oryza sativa (japonica cultivar-group) OsRPN12 m... 192 8e-46
5gb|BT016262.1| Zea mays clone Contig95 mRNA sequence 184 2e-43
6dbj|AK101316.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
7gb|AY103818.1| Zea mays PCO124949 mRNA sequence 184 2e-43
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
9dbj|AP005200.4| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
10dbj|AP004473.1| Lotus japonicus genomic DNA, chromosome 4, clone... 52 0.002
11gb|AC113514.9| Mus musculus chromosome 19, clone RP23-475D11, co... 44 0.45
12gb|AC116128.15| Mus musculus chromosome 19, clone RP23-95H3, com... 44 0.45
13dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 44 0.45
14gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 44 0.45
15ref|NM_105127.2| Arabidopsis thaliana peptidase AT1G64520 mRNA, ... 42 1.8
16gb|AY230847.1| Arabidopsis thaliana 26S proteasome subunit RPN12... 42 1.8
17gb|AY230846.1| Arabidopsis thaliana 26S proteasome subunit RPN12... 42 1.8
18gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 1.8
19gb|AY143888.1| Arabidopsis thaliana At1g64520/F1N19_10 mRNA, com... 42 1.8
20emb|AL356234.18| Human DNA sequence from clone RP11-95M15 on chr... 42 1.8
21gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 1.8
22gb|AC104122.2| Homo sapiens chromosome 5 clone RP11-410P18, comp... 42 1.8
23gb|AC027323.5| Homo sapiens chromosome 5 clone CTD-2034A10, comp... 42 1.8
24gb|AF410265.1|AF410265 Arabidopsis thaliana At1g64520/F1N19_10 m... 42 1.8
25gb|AY039857.1| Arabidopsis thaliana At1g64520/F1N19_10 mRNA, com... 42 1.8
26gb|AC154014.4| Mus musculus 6 BAC RP24-409C18 (Roswell Park Canc... 42 1.8
27emb|BX816010.1|CNS0ABWV Arabidopsis thaliana Full-length cDNA Co... 42 1.8
28emb|BX815245.1|CNS0AAGS Arabidopsis thaliana Full-length cDNA Co... 42 1.8
29emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 1.8
30emb|AL732474.8| Mouse DNA sequence from clone RP23-180I2 on chro... 42 1.8
31emb|AL606917.12| Mouse DNA sequence from clone RP23-25K8 on chro... 42 1.8
32emb|CT010576.9| Mouse DNA sequence from clone RP23-193B21 on chr... 40 7.0
33ref|XM_742921.1| Aspergillus fumigatus Af293 hypothetical protei... 40 7.0
34ref|XM_804113.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 7.0
35ref|XM_814008.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 7.0
36emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete ... 40 7.0
37emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 40 7.0
38emb|BX640419.1| Bordetella pertussis strain Tohama I, complete g... 40 7.0
39emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genom... 40 7.0
40gb|AC010186.6| Homo sapiens 12p12-21.3-21.8 BAC RP11-705C15 (Ros... 40 7.0
41gb|AC009519.4|AC009519 Genomic sequence for Arabidopsis thaliana... 40 7.0 
>ref|XM_477795.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 804

 Score =  192 bits (97), Expect = 8e-46
 Identities = 217/257 (84%)
 Strand = Plus / Plus

                                                                       
Query: 264 tcgcagctcaaggtgctcctcaccaagttccccagcctccctccgctcttccagcagacg 323
           |||||||||||||| | ||||||||||||||||||||| |||||    || |||||||| 
Sbjct: 94  tcgcagctcaaggtccgcctcaccaagttccccagccttcctccatcatttcagcagaca 153

                                                                       
Query: 324 cccaacgccgtggaggagctcaagctcgcgagggaaatttatgagcatgcagttcttttg 383
           || || || ||||| ||||| ||  | |||||||| || ||||||||||||||| || ||
Sbjct: 154 ccgaatgcagtggaagagctgaaaattgcgagggacatctatgagcatgcagttgttctg 213

                                                                       
Query: 384 agtgtgaaaatggaagatcaagatgcatttgaaagggacttctgccagctcaagccttat 443
           ||||||||||| ||||| ||||||||||||||||||||||| || || ||||| ||||||
Sbjct: 214 agtgtgaaaattgaagaccaagatgcatttgaaagggacttttgtcaactcaaaccttat 273

                                                                       
Query: 444 tacatggacacatgtggcatacttcctccatcttcaatggagtacccaatcatggggctt 503
           |||||||| ||||| |||||| |||| |||||  ||  |||||| |||||| |||| |||
Sbjct: 274 tacatggatacatgcggcataattccaccatcaccacaggagtatccaatcttgggtctt 333

                            
Query: 504 aaccttctgaggctgtt 520
           || ||||| ||||||||
Sbjct: 334 aatcttctaaggctgtt 350



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 171 atggatccgaagttggtggaggtgacgcagctgttcgaacgcttcaaggcggcct 225
           |||||||||||| ||||||||||||||||||| |||   ||||||||||| ||||
Sbjct: 1   atggatccgaagctggtggaggtgacgcagctcttctcccgcttcaaggcagcct 55
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>dbj|AK061408.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A10, full
           insert sequence
          Length = 1053

 Score =  192 bits (97), Expect = 8e-46
 Identities = 217/257 (84%)
 Strand = Plus / Plus

                                                                       
Query: 264 tcgcagctcaaggtgctcctcaccaagttccccagcctccctccgctcttccagcagacg 323
           |||||||||||||| | ||||||||||||||||||||| |||||    || |||||||| 
Sbjct: 173 tcgcagctcaaggtccgcctcaccaagttccccagccttcctccatcatttcagcagaca 232

                                                                       
Query: 324 cccaacgccgtggaggagctcaagctcgcgagggaaatttatgagcatgcagttcttttg 383
           || || || ||||| ||||| ||  | |||||||| || ||||||||||||||| || ||
Sbjct: 233 ccgaatgcagtggaagagctgaaaattgcgagggacatctatgagcatgcagttgttctg 292

                                                                       
Query: 384 agtgtgaaaatggaagatcaagatgcatttgaaagggacttctgccagctcaagccttat 443
           ||||||||||| ||||| ||||||||||||||||||||||| || || ||||| ||||||
Sbjct: 293 agtgtgaaaattgaagaccaagatgcatttgaaagggacttttgtcaactcaaaccttat 352

                                                                       
Query: 444 tacatggacacatgtggcatacttcctccatcttcaatggagtacccaatcatggggctt 503
           |||||||| ||||| |||||| |||| |||||  ||  |||||| |||||| |||| |||
Sbjct: 353 tacatggatacatgcggcataattccaccatcaccacaggagtatccaatcttgggtctt 412

                            
Query: 504 aaccttctgaggctgtt 520
           || ||||| ||||||||
Sbjct: 413 aatcttctaaggctgtt 429



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 171 atggatccgaagttggtggaggtgacgcagctgttcgaacgcttcaaggcggcct 225
           |||||||||||| ||||||||||||||||||| |||   ||||||||||| ||||
Sbjct: 80  atggatccgaagctggtggaggtgacgcagctcttctcccgcttcaaggcagcct 134
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>dbj|AK061383.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-H08, full
           insert sequence
          Length = 1230

 Score =  192 bits (97), Expect = 8e-46
 Identities = 217/257 (84%)
 Strand = Plus / Plus

                                                                       
Query: 264 tcgcagctcaaggtgctcctcaccaagttccccagcctccctccgctcttccagcagacg 323
           |||||||||||||| | ||||||||||||||||||||| |||||    || |||||||| 
Sbjct: 185 tcgcagctcaaggtccgcctcaccaagttccccagccttcctccatcatttcagcagaca 244

                                                                       
Query: 324 cccaacgccgtggaggagctcaagctcgcgagggaaatttatgagcatgcagttcttttg 383
           || || || ||||| ||||| ||  | |||||||| || ||||||||||||||| || ||
Sbjct: 245 ccgaatgcagtggaagagctgaaaattgcgagggacatctatgagcatgcagttgttctg 304

                                                                       
Query: 384 agtgtgaaaatggaagatcaagatgcatttgaaagggacttctgccagctcaagccttat 443
           ||||||||||| ||||| ||||||||||||||||||||||| || || ||||| ||||||
Sbjct: 305 agtgtgaaaattgaagaccaagatgcatttgaaagggacttttgtcaactcaaaccttat 364

                                                                       
Query: 444 tacatggacacatgtggcatacttcctccatcttcaatggagtacccaatcatggggctt 503
           |||||||| ||||| |||||| |||| |||||  ||  |||||| |||||| |||| |||
Sbjct: 365 tacatggatacatgcggcataattccaccatcaccacaggagtatccaatcttgggtctt 424

                            
Query: 504 aaccttctgaggctgtt 520
           || ||||| ||||||||
Sbjct: 425 aatcttctaaggctgtt 441



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 171 atggatccgaagttggtggaggtgacgcagctgttcgaacgcttcaaggcggcct 225
           |||||||||||| ||||||||||||||||||| |||   ||||||||||| ||||
Sbjct: 92  atggatccgaagctggtggaggtgacgcagctcttctcccgcttcaaggcagcct 146
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>dbj|AB037153.1| Oryza sativa (japonica cultivar-group) OsRPN12 mRNA for 26S
           proteasome regulatory particle non-ATPase subunit12,
           complete cds
          Length = 1063

 Score =  192 bits (97), Expect = 8e-46
 Identities = 217/257 (84%)
 Strand = Plus / Plus

                                                                       
Query: 264 tcgcagctcaaggtgctcctcaccaagttccccagcctccctccgctcttccagcagacg 323
           |||||||||||||| | ||||||||||||||||||||| |||||    || |||||||| 
Sbjct: 169 tcgcagctcaaggtccgcctcaccaagttccccagccttcctccatcatttcagcagaca 228

                                                                       
Query: 324 cccaacgccgtggaggagctcaagctcgcgagggaaatttatgagcatgcagttcttttg 383
           || || || ||||| ||||| ||  | |||||||| || ||||||||||||||| || ||
Sbjct: 229 ccgaatgcagtggaagagctgaaaattgcgagggacatctatgagcatgcagttgttctg 288

                                                                       
Query: 384 agtgtgaaaatggaagatcaagatgcatttgaaagggacttctgccagctcaagccttat 443
           ||||||||||| ||||| ||||||||||||||||||||||| || || ||||| ||||||
Sbjct: 289 agtgtgaaaattgaagaccaagatgcatttgaaagggacttttgtcaactcaaaccttat 348

                                                                       
Query: 444 tacatggacacatgtggcatacttcctccatcttcaatggagtacccaatcatggggctt 503
           |||||||| ||||| |||||| |||| |||||  ||  |||||| |||||| |||| |||
Sbjct: 349 tacatggatacatgcggcataattccaccatcaccacaggagtatccaatcttgggtctt 408

                            
Query: 504 aaccttctgaggctgtt 520
           || ||||| ||||||||
Sbjct: 409 aatcttctaaggctgtt 425



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 171 atggatccgaagttggtggaggtgacgcagctgttcgaacgcttcaaggcggcct 225
           |||||||||||| ||||||||||||||||||| |||   ||||||||||| ||||
Sbjct: 76  atggatccgaagctggtggaggtgacgcagctcttctcccgcttcaaggcagcct 130
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>gb|BT016262.1| Zea mays clone Contig95 mRNA sequence
          Length = 1020

 Score =  184 bits (93), Expect = 2e-43
 Identities = 273/333 (81%)
 Strand = Plus / Plus

                                                                       
Query: 189 gaggtgacgcagctgttcgaacgcttcaaggcggcctgcaagcgcagcgatctcgacgcc 248
           |||||||| ||| ||||||  |||||||||||||||| |   |||| ||| ||| || ||
Sbjct: 21  gaggtgacccagatgttcgcccgcttcaaggcggcctacgcccgcaacgacctcaacacc 80

                                                                       
Query: 249 tccgcgaccctcctctcgcagctcaaggtgctcctcaccaagttccccagcctccctccg 308
           | ||  ||||||||||||||||||||||| |  |||||| | ||||||||||| || || 
Sbjct: 81  tgcgtcaccctcctctcgcagctcaaggtccatctcacccaattccccagccttccgccc 140

                                                                       
Query: 309 ctcttccagcagacgcccaacgccgtggaggagctcaagctcgcgagggaaatttatgag 368
            | || |||||||| || |||   |||||||||||||| || || ||||| |||||||||
Sbjct: 141 ttgtttcagcagacaccgaacattgtggaggagctcaaacttgcaagggacatttatgag 200

                                                                       
Query: 369 catgcagttcttttgagtgtgaaaatggaagatcaagatgcatttgaaagggacttctgc 428
           ||||| ||| |||||||||||||| | || || |||||||| |||||| | || ||||||
Sbjct: 201 catgctgttgttttgagtgtgaaacttgaggaccaagatgcgtttgaacgcgatttctgc 260

                                                                       
Query: 429 cagctcaagccttattacatggacacatgtggcatacttcctccatcttcaatggagtac 488
           ||||| ||||||||||||||||| |||||||||||| ||||  | ||  ||  |||||||
Sbjct: 261 cagctgaagccttattacatggatacatgtggcataattcccgcctcgccagaggagtac 320

                                            
Query: 489 ccaatcatggggcttaaccttctgaggctgttg 521
           |||||  |||| || || |||||||||||||||
Sbjct: 321 ccaattttgggactcaatcttctgaggctgttg 353
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>dbj|AK101316.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034D03, full
           insert sequence
          Length = 1218

 Score =  184 bits (93), Expect = 2e-43
 Identities = 216/257 (84%)
 Strand = Plus / Plus

                                                                       
Query: 264 tcgcagctcaaggtgctcctcaccaagttccccagcctccctccgctcttccagcagacg 323
           |||||||||||||| | ||||||||||||||| ||||| |||||    || |||||||| 
Sbjct: 174 tcgcagctcaaggtccgcctcaccaagttcccaagccttcctccatcatttcagcagaca 233

                                                                       
Query: 324 cccaacgccgtggaggagctcaagctcgcgagggaaatttatgagcatgcagttcttttg 383
           || || || ||||| ||||| ||  | |||||||| || ||||||||||||||| || ||
Sbjct: 234 ccgaatgcagtggaagagctgaaaattgcgagggacatctatgagcatgcagttgttctg 293

                                                                       
Query: 384 agtgtgaaaatggaagatcaagatgcatttgaaagggacttctgccagctcaagccttat 443
           ||||||||||| ||||| ||||||||||||||||||||||| || || ||||| ||||||
Sbjct: 294 agtgtgaaaattgaagaccaagatgcatttgaaagggacttttgtcaactcaaaccttat 353

                                                                       
Query: 444 tacatggacacatgtggcatacttcctccatcttcaatggagtacccaatcatggggctt 503
           |||||||| ||||| |||||| |||| |||||  ||  |||||| |||||| |||| |||
Sbjct: 354 tacatggatacatgcggcataattccaccatcaccacaggagtatccaatcttgggtctt 413

                            
Query: 504 aaccttctgaggctgtt 520
           || ||||| ||||||||
Sbjct: 414 aatcttctaaggctgtt 430



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 171 atggatccgaagttggtggaggtgacgcagctgttcgaacgcttcaaggcggcct 225
           |||||||||||| ||||||||||||||||||| |||   ||||||||||| ||||
Sbjct: 81  atggatccgaagctggtggaggtgacgcagctcttctcccgcttcaaggcagcct 135
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>gb|AY103818.1| Zea mays PCO124949 mRNA sequence
          Length = 1251

 Score =  184 bits (93), Expect = 2e-43
 Identities = 273/333 (81%)
 Strand = Plus / Plus

                                                                       
Query: 189 gaggtgacgcagctgttcgaacgcttcaaggcggcctgcaagcgcagcgatctcgacgcc 248
           |||||||| ||| ||||||  |||||||||||||||| |   |||| ||| ||| || ||
Sbjct: 227 gaggtgacccagatgttcgcccgcttcaaggcggcctacgcccgcaacgacctcaacacc 286

                                                                       
Query: 249 tccgcgaccctcctctcgcagctcaaggtgctcctcaccaagttccccagcctccctccg 308
           | ||  ||||||||||||||||||||||| |  |||||| | ||||||||||| || || 
Sbjct: 287 tgcgtcaccctcctctcgcagctcaaggtccatctcacccaattccccagccttccgccc 346

                                                                       
Query: 309 ctcttccagcagacgcccaacgccgtggaggagctcaagctcgcgagggaaatttatgag 368
            | || |||||||| || |||   |||||||||||||| || || ||||| |||||||||
Sbjct: 347 ttgtttcagcagacaccgaacattgtggaggagctcaaacttgcaagggacatttatgag 406

                                                                       
Query: 369 catgcagttcttttgagtgtgaaaatggaagatcaagatgcatttgaaagggacttctgc 428
           ||||| ||| |||||||||||||| | || || |||||||| |||||| | || ||||||
Sbjct: 407 catgctgttgttttgagtgtgaaacttgaggaccaagatgcgtttgaacgcgatttctgc 466

                                                                       
Query: 429 cagctcaagccttattacatggacacatgtggcatacttcctccatcttcaatggagtac 488
           ||||| ||||||||||||||||| |||||||||||| ||||  | ||  ||  |||||||
Sbjct: 467 cagctgaagccttattacatggatacatgtggcataattcccgcctcgccagaggagtac 526

                                            
Query: 489 ccaatcatggggcttaaccttctgaggctgttg 521
           |||||  |||| || || |||||||||||||||
Sbjct: 527 ccaattttgggactcaatcttctgaggctgttg 559
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  117 bits (59), Expect = 4e-23
 Identities = 86/95 (90%)
 Strand = Plus / Minus

                                                                            
Query: 363      tatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcatttgaaagggac 422
                ||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 14475455 tatgagcatgcagttgttctgagtgtgaaaattgaagaccaagatgcatttgaaagggac 14475396

                                                   
Query: 423      ttctgccagctcaagccttattacatggacacatg 457
                || || || ||||| |||||||||||||| |||||
Sbjct: 14475395 ttttgtcaactcaaaccttattacatggatacatg 14475361



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                       
Query: 171      atggatccgaagttggtggaggtgacgcagctgttcgaacgcttcaaggcggcct 225
                |||||||||||| ||||||||||||||||||| |||   ||||||||||| ||||
Sbjct: 14476852 atggatccgaagctggtggaggtgacgcagctcttctcccgcttcaaggcagcct 14476798



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 281      cctcaccaagttccccagcctccctcc 307
                ||||||||||||||||||||| |||||
Sbjct: 14476273 cctcaccaagttccccagccttcctcc 14476247
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>dbj|AP005200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0673E01
          Length = 125909

 Score =  117 bits (59), Expect = 4e-23
 Identities = 86/95 (90%)
 Strand = Plus / Minus

                                                                         
Query: 363   tatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcatttgaaagggac 422
             ||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 95786 tatgagcatgcagttgttctgagtgtgaaaattgaagaccaagatgcatttgaaagggac 95727

                                                
Query: 423   ttctgccagctcaagccttattacatggacacatg 457
             || || || ||||| |||||||||||||| |||||
Sbjct: 95726 ttttgtcaactcaaaccttattacatggatacatg 95692



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                    
Query: 171   atggatccgaagttggtggaggtgacgcagctgttcgaacgcttcaaggcggcct 225
             |||||||||||| ||||||||||||||||||| |||   ||||||||||| ||||
Sbjct: 97183 atggatccgaagctggtggaggtgacgcagctcttctcccgcttcaaggcagcct 97129



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 281   cctcaccaagttccccagcctccctcc 307
             ||||||||||||||||||||| |||||
Sbjct: 96604 cctcaccaagttccccagccttcctcc 96578
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>dbj|AP004473.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10J15, TM0007,
             complete sequence
          Length = 92741

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                         
Query: 384   agtgtgaaaatggaagatcaagatgcatttgaaagggacttctgccagctcaagccttat 443
             ||||||||||  || ||||||||||| ||||| ||||| |||| |||||| || ||||||
Sbjct: 83685 agtgtgaaaactgaggatcaagatgcctttgagagggatttcttccagctgaaaccttat 83626

               
Query: 444   ta 445
             ||
Sbjct: 83625 ta 83624
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>gb|AC113514.9| Mus musculus chromosome 19, clone RP23-475D11, complete sequence
          Length = 170366

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 286    ccaagttccccagcctccctcc 307
              ||||||||||||||||||||||
Sbjct: 125636 ccaagttccccagcctccctcc 125657
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>gb|AC116128.15| Mus musculus chromosome 19, clone RP23-95H3, complete sequence
          Length = 228363

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 286   ccaagttccccagcctccctcc 307
             ||||||||||||||||||||||
Sbjct: 13756 ccaagttccccagcctccctcc 13777
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 203     gttcgaacgcttcaaggcggcc 224
               ||||||||||||||||||||||
Sbjct: 4901285 gttcgaacgcttcaaggcggcc 4901264
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 203     gttcgaacgcttcaaggcggcc 224
               ||||||||||||||||||||||
Sbjct: 4904302 gttcgaacgcttcaaggcggcc 4904281
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>ref|NM_105127.2| Arabidopsis thaliana peptidase AT1G64520 mRNA, complete cds
          Length = 1063

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                       
Query: 354 agggaaatttatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcattt 413
           ||||| |||||||||||||| ||| || | || || ||||  || ||||||||||| |||
Sbjct: 245 agggacatttatgagcatgctgttgttctaagcgtcaaaaccgaggatcaagatgctttt 304

                                        
Query: 414 gaaagggacttctgccagctcaagcctta 442
           || || || |||| |||||| || |||||
Sbjct: 305 gagagagatttcttccagctgaaacctta 333
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>gb|AY230847.1| Arabidopsis thaliana 26S proteasome subunit RPN12 (RPN12) mRNA,
           RPN12-2 allele, complete cds
          Length = 1054

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                       
Query: 354 agggaaatttatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcattt 413
           ||||| |||||||||||||| ||| || | || || ||||  || ||||||||||| |||
Sbjct: 217 agggacatttatgagcatgctgttgttctaagcgtcaaaaccgaggatcaagatgctttt 276

                                        
Query: 414 gaaagggacttctgccagctcaagcctta 442
           || || || |||| |||||| || |||||
Sbjct: 277 gagagagatttcttccagctgaaacctta 305
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>gb|AY230846.1| Arabidopsis thaliana 26S proteasome subunit RPN12 (RPN12) mRNA,
           RPN12-1 allele, complete cds
          Length = 1038

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                       
Query: 354 agggaaatttatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcattt 413
           ||||| |||||||||||||| ||| || | || || ||||  || ||||||||||| |||
Sbjct: 207 agggacatttatgagcatgctgttgttctaagcgtcaaaaccgaggatcaagatgctttt 266

                                        
Query: 414 gaaagggacttctgccagctcaagcctta 442
           || || || |||| |||||| || |||||
Sbjct: 267 gagagagatttcttccagctgaaacctta 295
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 205    tcgaacgcttcaaggcggcctgcaagcgc 233
              ||||||||||| ||||||| |||||||||
Sbjct: 411439 tcgaacgcttcgaggcggcgtgcaagcgc 411411
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>gb|AY143888.1| Arabidopsis thaliana At1g64520/F1N19_10 mRNA, complete cds
          Length = 804

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                       
Query: 354 agggaaatttatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcattt 413
           ||||| |||||||||||||| ||| || | || || ||||  || ||||||||||| |||
Sbjct: 184 agggacatttatgagcatgctgttgttctaagcgtcaaaaccgaggatcaagatgctttt 243

                                        
Query: 414 gaaagggacttctgccagctcaagcctta 442
           || || || |||| |||||| || |||||
Sbjct: 244 gagagagatttcttccagctgaaacctta 272
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>emb|AL356234.18| Human DNA sequence from clone RP11-95M15 on chromosome 6 Contains a
             novel gene and a protein tyrosine phosphatase non-receptor
             type 11 (Nooan syndrome) (PTPN11) pseudogene, complete
             sequence
          Length = 115224

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 401   tcaagatgcatttgaaaggga 421
             |||||||||||||||||||||
Sbjct: 56493 tcaagatgcatttgaaaggga 56473
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 328     acgccgtggaggagctcaagctcgc 352
               |||||||||| ||||||||||||||
Sbjct: 2316349 acgccgtggatgagctcaagctcgc 2316373
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>gb|AC104122.2| Homo sapiens chromosome 5 clone RP11-410P18, complete sequence
          Length = 142636

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 397   aagatcaagatgcatttgaaa 417
             |||||||||||||||||||||
Sbjct: 45212 aagatcaagatgcatttgaaa 45192
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>gb|AC027323.5| Homo sapiens chromosome 5 clone CTD-2034A10, complete sequence
          Length = 140016

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 397    aagatcaagatgcatttgaaa 417
              |||||||||||||||||||||
Sbjct: 103937 aagatcaagatgcatttgaaa 103917
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>gb|AF410265.1|AF410265 Arabidopsis thaliana At1g64520/F1N19_10 mRNA, complete cds
          Length = 1008

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                       
Query: 354 agggaaatttatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcattt 413
           ||||| |||||||||||||| ||| || | || || ||||  || ||||||||||| |||
Sbjct: 230 agggacatttatgagcatgctgttgttctaagcgtcaaaaccgaggatcaagatgctttt 289

                                        
Query: 414 gaaagggacttctgccagctcaagcctta 442
           || || || |||| |||||| || |||||
Sbjct: 290 gagagagatttcttccagctgaaacctta 318
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>gb|AY039857.1| Arabidopsis thaliana At1g64520/F1N19_10 mRNA, complete cds
          Length = 953

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                       
Query: 354 agggaaatttatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcattt 413
           ||||| |||||||||||||| ||| || | || || ||||  || ||||||||||| |||
Sbjct: 193 agggacatttatgagcatgctgttgttctaagcgtcaaaaccgaggatcaagatgctttt 252

                                        
Query: 414 gaaagggacttctgccagctcaagcctta 442
           || || || |||| |||||| || |||||
Sbjct: 253 gagagagatttcttccagctgaaacctta 281
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>gb|AC154014.4| Mus musculus 6 BAC RP24-409C18 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 161963

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 376   ttcttttgagtgtgaaaatgg 396
             |||||||||||||||||||||
Sbjct: 65231 ttcttttgagtgtgaaaatgg 65251
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>emb|BX816010.1|CNS0ABWV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH22ZE10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 960

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                       
Query: 354 agggaaatttatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcattt 413
           ||||| |||||||||||||| ||| || | || || ||||  || ||||||||||| |||
Sbjct: 237 agggacatttatgagcatgctgttgttctaagcgtcaaaaccgaggatcaagatgctttt 296

                                        
Query: 414 gaaagggacttctgccagctcaagcctta 442
           || || || |||| |||||| || |||||
Sbjct: 297 gagagagatttcttccagctgaaacctta 325
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>emb|BX815245.1|CNS0AAGS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS46ZA05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1025

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                       
Query: 354 agggaaatttatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcattt 413
           ||||| |||||||||||||| ||| || | || || ||||  || ||||||||||| |||
Sbjct: 226 agggacatttatgagcatgctgttgttctaagcgtcaaaaccgaggatcaagatgctttt 285

                                        
Query: 414 gaaagggacttctgccagctcaagcctta 442
           || || || |||| |||||| || |||||
Sbjct: 286 gagagagatttcttccagctgaaacctta 314
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 191     ggtgacgcagctgttcgaacgcttc 215
               |||||||||| ||||||||||||||
Sbjct: 2624545 ggtgacgcagttgttcgaacgcttc 2624521
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>emb|AL732474.8| Mouse DNA sequence from clone RP23-180I2 on chromosome 4, complete
             sequence
          Length = 151555

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 385   gtgtgaaaatggaagatcaag 405
             |||||||||||||||||||||
Sbjct: 65908 gtgtgaaaatggaagatcaag 65888
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>emb|AL606917.12| Mouse DNA sequence from clone RP23-25K8 on chromosome 4, complete
             sequence
          Length = 52163

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 281   cctcaccaagttccccagcct 301
             |||||||||||||||||||||
Sbjct: 48847 cctcaccaagttccccagcct 48867
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>emb|CT010576.9| Mouse DNA sequence from clone RP23-193B21 on chromosome 16, complete
             sequence
          Length = 208110

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 402   caagatgcatttgaaaggga 421
             ||||||||||||||||||||
Sbjct: 45956 caagatgcatttgaaaggga 45975
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>ref|XM_742921.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g03290) partial
            mRNA
          Length = 1701

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 334  tggaggagctcaagctcgcg 353
            ||||||||||||||||||||
Sbjct: 1111 tggaggagctcaagctcgcg 1130
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>ref|XM_804113.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053507883.70) partial mRNA
          Length = 2187

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   gcggcgctcgatctcatcat 71
            ||||||||||||||||||||
Sbjct: 1159 gcggcgctcgatctcatcat 1178
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>ref|XM_814008.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506195.70) partial mRNA
          Length = 2190

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   gcggcgctcgatctcatcat 71
            ||||||||||||||||||||
Sbjct: 1162 gcggcgctcgatctcatcat 1181
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>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 215    caaggcggcctgcaagcgca 234
              ||||||||||||||||||||
Sbjct: 326685 caaggcggcctgcaagcgca 326666
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>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 215    caaggcggcctgcaagcgca 234
              ||||||||||||||||||||
Sbjct: 239408 caaggcggcctgcaagcgca 239389
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>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12
          Length = 349672

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 215    caaggcggcctgcaagcgca 234
              ||||||||||||||||||||
Sbjct: 310663 caaggcggcctgcaagcgca 310682
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>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16
          Length = 346879

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 262    tctcgcagctcaaggtgctcctcaccaa 289
              |||||| |||||||||||| ||||||||
Sbjct: 275383 tctcgctgctcaaggtgctgctcaccaa 275356
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>gb|AC010186.6| Homo sapiens 12p12-21.3-21.8 BAC RP11-705C15 (Roswell Park Cancer
             Institute Human BAC Library) complete sequence
          Length = 74801

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   tcaagatgcatttgaaaggg 420
             ||||||||||||||||||||
Sbjct: 27171 tcaagatgcatttgaaaggg 27190
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>gb|AC009519.4|AC009519 Genomic sequence for Arabidopsis thaliana BAC F1N19 from chromosome I,
             complete sequence
          Length = 113172

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 71/88 (80%)
 Strand = Plus / Plus

                                                                         
Query: 355   gggaaatttatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcatttg 414
             |||| |||||||||||||| ||| || | || || ||||  || ||||||||||| ||||
Sbjct: 25525 gggacatttatgagcatgctgttgttctaagcgtcaaaaccgaggatcaagatgcttttg 25584

                                         
Query: 415   aaagggacttctgccagctcaagcctta 442
             | || || |||| |||||| || |||||
Sbjct: 25585 agagagatttcttccagctgaaacctta 25612


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,644,440
Number of Sequences: 3902068
Number of extensions: 3644440
Number of successful extensions: 71368
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71015
Number of HSP's gapped (non-prelim): 344
length of query: 521
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 498
effective length of database: 17,143,297,704
effective search space: 8537362256592
effective search space used: 8537362256592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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