ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart54e04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483413.1| Oryza sativa (japonica cultivar-group), mRNA Length = 792 Score = 252 bits (127), Expect = 1e-63 Identities = 282/333 (84%), Gaps = 3/333 (0%) Strand = Plus / Plus Query: 186 gcgtgcgcggccgagaagttcccggcggggaagacgtacgccaagtgcgaggacctcccg 245 |||||||| | |||||||||||||||||||| | ||||||| |||||||||||| ||| Sbjct: 82 gcgtgcgccggcgagaagttcccggcggggagggcgtacgcggcgtgcgaggacctgccg 141 Query: 246 cagctgggggccgcgctgcactggacctacgacgagtccaagtcgtccctctcgctggcg 305 || || || |||||||||| || ||||||| ||||||||||||||| ||| ||||| Sbjct: 142 agcctcggcgcggcgctgcactacacgtacgacgcgtccaagtcgtccctgtcggtggcg 201 Query: 306 ttcgtggccgcgccggcgggggccaacgggtgggtggcctgggcgctcaaccccacgggc 365 |||||||| ||||||||||| ||| |||||||||||| |||| ||| |||||||| ||| Sbjct: 202 ttcgtggcggcgccggcgggcgccggcgggtgggtggcgtgggggctgaaccccaccggc 261 Query: 366 gagggcatggccggcgcgcaggcgctcgtggcgctcaagg---gctccggcgccgccgcg 422 ||||| |||||||| |||||||||||||||||||||||| |||| | | | ||| Sbjct: 262 gaggggatggccgggacgcaggcgctcgtggcgctcaagggcggctcgtcctcgtcggcg 321 Query: 423 cccaccgtcaggacgtacaacatcaccggctacgtgccgctcggcaaggcctccacgccc 482 ||| |||| | ||| |||||||||||||||||||| |||||||| ||||| |||||| Sbjct: 322 cccgccgtgaagacatacaacatcaccggctacgtcgcgctcggcggcgcctcgacgccc 381 Query: 483 atcgcgttcccggccaccgacctcgccgccgac 515 ||||||||||||||||||||||||||||||||| Sbjct: 382 atcgcgttcccggccaccgacctcgccgccgac 414
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 252 bits (127), Expect = 1e-63 Identities = 282/333 (84%), Gaps = 3/333 (0%) Strand = Plus / Plus Query: 186 gcgtgcgcggccgagaagttcccggcggggaagacgtacgccaagtgcgaggacctcccg 245 |||||||| | |||||||||||||||||||| | ||||||| |||||||||||| ||| Sbjct: 26079471 gcgtgcgccggcgagaagttcccggcggggagggcgtacgcggcgtgcgaggacctgccg 26079530 Query: 246 cagctgggggccgcgctgcactggacctacgacgagtccaagtcgtccctctcgctggcg 305 || || || |||||||||| || ||||||| ||||||||||||||| ||| ||||| Sbjct: 26079531 agcctcggcgcggcgctgcactacacgtacgacgcgtccaagtcgtccctgtcggtggcg 26079590 Query: 306 ttcgtggccgcgccggcgggggccaacgggtgggtggcctgggcgctcaaccccacgggc 365 |||||||| ||||||||||| ||| |||||||||||| |||| ||| |||||||| ||| Sbjct: 26079591 ttcgtggcggcgccggcgggcgccggcgggtgggtggcgtgggggctgaaccccaccggc 26079650 Query: 366 gagggcatggccggcgcgcaggcgctcgtggcgctcaagg---gctccggcgccgccgcg 422 ||||| |||||||| |||||||||||||||||||||||| |||| | | | ||| Sbjct: 26079651 gaggggatggccgggacgcaggcgctcgtggcgctcaagggcggctcgtcctcgtcggcg 26079710 Query: 423 cccaccgtcaggacgtacaacatcaccggctacgtgccgctcggcaaggcctccacgccc 482 ||| |||| | ||| |||||||||||||||||||| |||||||| ||||| |||||| Sbjct: 26079711 cccgccgtgaagacatacaacatcaccggctacgtcgcgctcggcggcgcctcgacgccc 26079770 Query: 483 atcgcgttcccggccaccgacctcgccgccgac 515 ||||||||||||||||||||||||||||||||| Sbjct: 26079771 atcgcgttcccggccaccgacctcgccgccgac 26079803 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 301 tggcgttcgtggccgcgccggcgggggccaacgggtgggtggcctgggcgctcaacccca 360 |||||||||| ||||||||| || | || |||||||||||| |||| ||||||||| | Sbjct: 26067143 tggcgttcgtcgccgcgccgccgtcgcccggcgggtgggtggcgtgggggctcaacccga 26067084 Query: 361 cgggcgagggcatggccggcgcgcaggcgctcgtggcgct 400 | |||| || ||||||||| ||||||||||||| ||||| Sbjct: 26067083 ccggcggcgggatggccggcacgcaggcgctcgtcgcgct 26067044 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 caagggctccggcgccgccgcgcc 424 ||||||||||||||||| |||||| Sbjct: 17830699 caagggctccggcgccggcgcgcc 17830722
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1191_A10 Length = 140643 Score = 252 bits (127), Expect = 1e-63 Identities = 282/333 (84%), Gaps = 3/333 (0%) Strand = Plus / Plus Query: 186 gcgtgcgcggccgagaagttcccggcggggaagacgtacgccaagtgcgaggacctcccg 245 |||||||| | |||||||||||||||||||| | ||||||| |||||||||||| ||| Sbjct: 23402 gcgtgcgccggcgagaagttcccggcggggagggcgtacgcggcgtgcgaggacctgccg 23461 Query: 246 cagctgggggccgcgctgcactggacctacgacgagtccaagtcgtccctctcgctggcg 305 || || || |||||||||| || ||||||| ||||||||||||||| ||| ||||| Sbjct: 23462 agcctcggcgcggcgctgcactacacgtacgacgcgtccaagtcgtccctgtcggtggcg 23521 Query: 306 ttcgtggccgcgccggcgggggccaacgggtgggtggcctgggcgctcaaccccacgggc 365 |||||||| ||||||||||| ||| |||||||||||| |||| ||| |||||||| ||| Sbjct: 23522 ttcgtggcggcgccggcgggcgccggcgggtgggtggcgtgggggctgaaccccaccggc 23581 Query: 366 gagggcatggccggcgcgcaggcgctcgtggcgctcaagg---gctccggcgccgccgcg 422 ||||| |||||||| |||||||||||||||||||||||| |||| | | | ||| Sbjct: 23582 gaggggatggccgggacgcaggcgctcgtggcgctcaagggcggctcgtcctcgtcggcg 23641 Query: 423 cccaccgtcaggacgtacaacatcaccggctacgtgccgctcggcaaggcctccacgccc 482 ||| |||| | ||| |||||||||||||||||||| |||||||| ||||| |||||| Sbjct: 23642 cccgccgtgaagacatacaacatcaccggctacgtcgcgctcggcggcgcctcgacgccc 23701 Query: 483 atcgcgttcccggccaccgacctcgccgccgac 515 ||||||||||||||||||||||||||||||||| Sbjct: 23702 atcgcgttcccggccaccgacctcgccgccgac 23734 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 301 tggcgttcgtggccgcgccggcgggggccaacgggtgggtggcctgggcgctcaacccca 360 |||||||||| ||||||||| || | || |||||||||||| |||| ||||||||| | Sbjct: 11074 tggcgttcgtcgccgcgccgccgtcgcccggcgggtgggtggcgtgggggctcaacccga 11015 Query: 361 cgggcgagggcatggccggcgcgcaggcgctcgtggcgct 400 | |||| || ||||||||| ||||||||||||| ||||| Sbjct: 11014 ccggcggcgggatggccggcacgcaggcgctcgtcgcgct 10975
>gb|AY108865.1| Zea mays PCO075691 mRNA sequence Length = 425 Score = 188 bits (95), Expect = 1e-44 Identities = 229/274 (83%) Strand = Plus / Plus Query: 189 tgcgcggccgagaagttcccggcggggaagacgtacgccaagtgcgaggacctcccgcag 248 ||||||| ||||||||||||||||||| ||||||| |||||||||||| ||| || Sbjct: 152 tgcgcgggcgagaagttcccggcggggcgtgcgtacgcgtcgtgcgaggacctgccgaag 211 Query: 249 ctgggggccgcgctgcactggacctacgacgagtccaagtcgtccctctcgctggcgttc 308 ||||| || ||||||||||||| ||||||| ||||||| ||||| ||| |||||||| Sbjct: 212 ctgggcgcgtcgctgcactggacgtacgacgcgtccaagagctccctgtcggtggcgttc 271 Query: 309 gtggccgcgccggcgggggccaacgggtgggtggcctgggcgctcaaccccacgggcgag 368 ||||| ||||| |||| ||| |||||||||||| |||| || ||||| ||||||||| Sbjct: 272 gtggcggcgcccgcggcggcgggcgggtgggtggcgtggggcctgaaccctacgggcgag 331 Query: 369 ggcatggccggcgcgcaggcgctcgtggcgctcaagggctccggcgccgccgcgcccacc 428 ||||||||||||||||||||||| |||||||| ||| |||| ||||| |||||| || Sbjct: 332 ggcatggccggcgcgcaggcgctggtggcgctggcgggggccggggccgcggcgcccgcc 391 Query: 429 gtcaggacgtacaacatcaccggctacgtgccgc 462 || |||||||||||||||| || ||||| |||| Sbjct: 392 gtgcggacgtacaacatcacggggtacgtnccgc 425 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 99 gcctccacgatgccgcgccacatcgcgctgctgttgctcctgctcct 145 |||||||| ||||||||||| |||||||||| ||| ||||||||| Sbjct: 65 gcctccacaatgccgcgccatctcgcgctgctcctgcccctgctcct 111
>ref|XM_483411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1418 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 301 tggcgttcgtggccgcgccggcgggggccaacgggtgggtggcctgggcgctcaacccca 360 |||||||||| ||||||||| || | || |||||||||||| |||| ||||||||| | Sbjct: 256 tggcgttcgtcgccgcgccgccgtcgcccggcgggtgggtggcgtgggggctcaacccga 315 Query: 361 cgggcgagggcatggccggcgcgcaggcgctcgtggcgct 400 | |||| || ||||||||| ||||||||||||| ||||| Sbjct: 316 ccggcggcgggatggccggcacgcaggcgctcgtcgcgct 355
>dbj|AP003887.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1186_G01 Length = 112077 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 301 tggcgttcgtggccgcgccggcgggggccaacgggtgggtggcctgggcgctcaacccca 360 |||||||||| ||||||||| || | || |||||||||||| |||| ||||||||| | Sbjct: 102704 tggcgttcgtcgccgcgccgccgtcgcccggcgggtgggtggcgtgggggctcaacccga 102645 Query: 361 cgggcgagggcatggccggcgcgcaggcgctcgtggcgct 400 | |||| || ||||||||| ||||||||||||| ||||| Sbjct: 102644 ccggcggcgggatggccggcacgcaggcgctcgtcgcgct 102605
>dbj|AK058714.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D11, full insert sequence Length = 1418 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 301 tggcgttcgtggccgcgccggcgggggccaacgggtgggtggcctgggcgctcaacccca 360 |||||||||| ||||||||| || | || |||||||||||| |||| ||||||||| | Sbjct: 256 tggcgttcgtcgccgcgccgccgtcgcccggcgggtgggtggcgtgggggctcaacccga 315 Query: 361 cgggcgagggcatggccggcgcgcaggcgctcgtggcgct 400 | |||| || ||||||||| ||||||||||||| ||||| Sbjct: 316 ccggcggcgggatggccggcacgcaggcgctcgtcgcgct 355
>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0019D02, complete sequence Length = 154692 Score = 65.9 bits (33), Expect = 1e-07 Identities = 149/187 (79%), Gaps = 3/187 (1%) Strand = Plus / Plus Query: 332 cgggtgggtggcctgggcgctcaaccccacgggcgagggcatggccggcgcgcaggcgct 391 |||||||||| | |||||| |||||||||| ||||| |||||| |||||||||||||| Sbjct: 150199 cgggtgggtgtcgtgggcgatcaaccccaccggcgacggcatgaagggcgcgcaggcgct 150258 Query: 392 cgtggcgctcaaggg---ctccggcgccgccgcgcccaccgtcaggacgtacaacatcac 448 ||| || ||||||| | ||||||||||||| | ||| | ||||||||| |||| Sbjct: 150259 cgtcgccttcaagggcggcgccggcgccgccgcctacgtcgtgaacacgtacaacgtcac 150318 Query: 449 cggctacgtgccgctcggcaaggcctccacgcccatcgcgttcccggccaccgacctcgc 508 ||| ||| |||| || | || || ||||||||||||||| |||||||||||||| Sbjct: 150319 cgggtacaagccgttccccgccgcgtcaacgcccatcgcgttcaacgccaccgacctcgc 150378 Query: 509 cgccgac 515 ||||||| Sbjct: 150379 cgccgac 150385 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 197 cgagaagttcccggcggggaagacgtacgccaagtgcgaggacctcccgcagctgggggc 256 |||||||||||||||||||| || ||||| | ||||| ||||| ||| ||| || || Sbjct: 150058 cgagaagttcccggcggggaggagctacgcgacgtgcgccgacctgccggcgctcggcgc 150117 Query: 257 cgcgctgcactggacctacgacg 279 ||||||||||||||||||||| Sbjct: 150118 gacgctgcactggacctacgacg 150140 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 333 gggtgggtggcctgggcgctcaaccccacgggcgagggcatggccggcgcgcaggcgctc 392 ||||||||||| |||| ||||||||| | || || || |||||||| |||||||||||| Sbjct: 140717 gggtgggtggcgtgggggctcaacccggccggtgacgggatggccggggcgcaggcgctc 140658 Query: 393 gt 394 || Sbjct: 140657 gt 140656 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 483 atcgcgttcccggccaccgacctcgccgccga 514 |||||||||||||| | |||||||||||||| Sbjct: 140576 atcgcgttcccggcgtcggacctcgccgccga 140545
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 65.9 bits (33), Expect = 1e-07 Identities = 149/187 (79%), Gaps = 3/187 (1%) Strand = Plus / Plus Query: 332 cgggtgggtggcctgggcgctcaaccccacgggcgagggcatggccggcgcgcaggcgct 391 |||||||||| | |||||| |||||||||| ||||| |||||| |||||||||||||| Sbjct: 34873 cgggtgggtgtcgtgggcgatcaaccccaccggcgacggcatgaagggcgcgcaggcgct 34932 Query: 392 cgtggcgctcaaggg---ctccggcgccgccgcgcccaccgtcaggacgtacaacatcac 448 ||| || ||||||| | ||||||||||||| | ||| | ||||||||| |||| Sbjct: 34933 cgtcgccttcaagggcggcgccggcgccgccgcctacgtcgtgaacacgtacaacgtcac 34992 Query: 449 cggctacgtgccgctcggcaaggcctccacgcccatcgcgttcccggccaccgacctcgc 508 ||| ||| |||| || | || || ||||||||||||||| |||||||||||||| Sbjct: 34993 cgggtacaagccgttccccgccgcgtcaacgcccatcgcgttcaacgccaccgacctcgc 35052 Query: 509 cgccgac 515 ||||||| Sbjct: 35053 cgccgac 35059 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 197 cgagaagttcccggcggggaagacgtacgccaagtgcgaggacctcccgcagctgggggc 256 |||||||||||||||||||| || ||||| | ||||| ||||| ||| ||| || || Sbjct: 34732 cgagaagttcccggcggggaggagctacgcgacgtgcgccgacctgccggcgctcggcgc 34791 Query: 257 cgcgctgcactggacctacgacg 279 ||||||||||||||||||||| Sbjct: 34792 gacgctgcactggacctacgacg 34814 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 333 gggtgggtggcctgggcgctcaaccccacgggcgagggcatggccggcgcgcaggcgctc 392 ||||||||||| |||| ||||||||| | || || || |||||||| |||||||||||| Sbjct: 25391 gggtgggtggcgtgggggctcaacccggccggtgacgggatggccggggcgcaggcgctc 25332 Query: 393 gt 394 || Sbjct: 25331 gt 25330 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 483 atcgcgttcccggccaccgacctcgccgccga 514 |||||||||||||| | |||||||||||||| Sbjct: 25250 atcgcgttcccggcgtcggacctcgccgccga 25219
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 65.9 bits (33), Expect = 1e-07 Identities = 149/187 (79%), Gaps = 3/187 (1%) Strand = Plus / Plus Query: 332 cgggtgggtggcctgggcgctcaaccccacgggcgagggcatggccggcgcgcaggcgct 391 |||||||||| | |||||| |||||||||| ||||| |||||| |||||||||||||| Sbjct: 19104914 cgggtgggtgtcgtgggcgatcaaccccaccggcgacggcatgaagggcgcgcaggcgct 19104973 Query: 392 cgtggcgctcaaggg---ctccggcgccgccgcgcccaccgtcaggacgtacaacatcac 448 ||| || ||||||| | ||||||||||||| | ||| | ||||||||| |||| Sbjct: 19104974 cgtcgccttcaagggcggcgccggcgccgccgcctacgtcgtgaacacgtacaacgtcac 19105033 Query: 449 cggctacgtgccgctcggcaaggcctccacgcccatcgcgttcccggccaccgacctcgc 508 ||| ||| |||| || | || || ||||||||||||||| |||||||||||||| Sbjct: 19105034 cgggtacaagccgttccccgccgcgtcaacgcccatcgcgttcaacgccaccgacctcgc 19105093 Query: 509 cgccgac 515 ||||||| Sbjct: 19105094 cgccgac 19105100 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 197 cgagaagttcccggcggggaagacgtacgccaagtgcgaggacctcccgcagctgggggc 256 |||||||||||||||||||| || ||||| | ||||| ||||| ||| ||| || || Sbjct: 19104773 cgagaagttcccggcggggaggagctacgcgacgtgcgccgacctgccggcgctcggcgc 19104832 Query: 257 cgcgctgcactggacctacgacg 279 ||||||||||||||||||||| Sbjct: 19104833 gacgctgcactggacctacgacg 19104855 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 333 gggtgggtggcctgggcgctcaaccccacgggcgagggcatggccggcgcgcaggcgctc 392 ||||||||||| |||| ||||||||| | || || || |||||||| |||||||||||| Sbjct: 19095431 gggtgggtggcgtgggggctcaacccggccggtgacgggatggccggggcgcaggcgctc 19095372 Query: 393 gt 394 || Sbjct: 19095371 gt 19095370 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 483 atcgcgttcccggccaccgacctcgccgccga 514 |||||||||||||| | |||||||||||||| Sbjct: 19095290 atcgcgttcccggcgtcggacctcgccgccga 19095259
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 477 acgcccatcgcgttcccggccaccgacctcgccgccgac 515 ||||||||||||||| ||||||||||||||||||||| Sbjct: 15360629 acgcccatcgcgttcaacgccaccgacctcgccgccgac 15360591 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 168 tccgcggccggcgccggcgcgt 189 |||||||||||||||||||||| Sbjct: 2550429 tccgcggccggcgccggcgcgt 2550450 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 cgacctcgccgccgactccg 519 |||||||||||||||||||| Sbjct: 25006001 cgacctcgccgccgactccg 25005982
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 477 acgcccatcgcgttcccggccaccgacctcgccgccgac 515 ||||||||||||||| ||||||||||||||||||||| Sbjct: 15314912 acgcccatcgcgttcaacgccaccgacctcgccgccgac 15314874 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 168 tccgcggccggcgccggcgcgt 189 |||||||||||||||||||||| Sbjct: 2550373 tccgcggccggcgccggcgcgt 2550394 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 cgacctcgccgccgactccg 519 |||||||||||||||||||| Sbjct: 24934207 cgacctcgccgccgactccg 24934188
>emb|AL713928.3|CNS07YP5 Oryza sativa chromosome 12, . BAC OSJNBa0036B12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151541 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 477 acgcccatcgcgttcccggccaccgacctcgccgccgac 515 ||||||||||||||| ||||||||||||||||||||| Sbjct: 136022 acgcccatcgcgttcaacgccaccgacctcgccgccgac 135984
>gb|AC008144.5|AC008144 Drosophila melanogaster, chromosome 3R, region 93F-93F, BAC clone BACR04F21, complete sequence Length = 171226 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 125 gctgctgttgctcctgctcctc 146 |||||||||||||||||||||| Sbjct: 45504 gctgctgttgctcctgctcctc 45483
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cgtccgcggccggcgccggcgc 187 |||||||||||||||||||||| Sbjct: 1567181 cgtccgcggccggcgccggcgc 1567160 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ccgcggccggcgccggcgcg 188 |||||||||||||||||||| Sbjct: 3786664 ccgcggccggcgccggcgcg 3786683 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 392 cgtggcgctcaagggctccggcgccgccgcgc 423 |||||||||| ||||||||||||||||||| Sbjct: 801040 cgtggcgctcgccggctccggcgccgccgcgc 801009
>gb|DQ322651.1| Streptomyces sp. FR1 plasmid pFRL1, complete sequence Length = 54288 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 491 cccggccaccgacctcgccgcc 512 |||||||||||||||||||||| Sbjct: 34109 cccggccaccgacctcgccgcc 34130
>gb|AE003737.3| Drosophila melanogaster chromosome 3R, section 75 of 118 of the complete sequence Length = 178251 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 gctgctgttgctcctgctcctc 146 |||||||||||||||||||||| Sbjct: 140880 gctgctgttgctcctgctcctc 140901
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 tccgcggccggcgccggcgcgt 189 |||||||||||||||||||||| Sbjct: 117580 tccgcggccggcgccggcgcgt 117559
>gb|U00034.1| Caenorhabditis elegans cosmid C06E8, complete sequence Length = 26435 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 cgccgccgcgcccaccgtcag 433 ||||||||||||||||||||| Sbjct: 4968 cgccgccgcgcccaccgtcag 4988
>gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence Length = 114178 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 367 agggcatggccggcgcgcaggcgct 391 |||||||| |||||||||||||||| Sbjct: 38410 agggcatgaccggcgcgcaggcgct 38434
>ref|XM_361363.1| Magnaporthe grisea 70-15 hypothetical protein (MG03837.4) partial mRNA Length = 2733 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gctgctgttgctcctgctcct 145 ||||||||||||||||||||| Sbjct: 2407 gctgctgttgctcctgctcct 2387
>gb|AY216697.1| Toxoptera citricida 18S ribosomal RNA gene, complete sequence Length = 2480 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 158 gcgcgcggcgtccgcggccggcgccggcg 186 |||||| ||||||||||||| |||||||| Sbjct: 1958 gcgcgccgcgtccgcggccgtcgccggcg 1986
>gb|AC122417.4| Mus musculus BAC clone RP24-159C12 from chromosome 7, complete sequence Length = 188555 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ggcgccggcgcgtgcgcggcc 197 ||||||||||||||||||||| Sbjct: 63485 ggcgccggcgcgtgcgcggcc 63465
>tpg|BK003676.1| TPA: TPA_inf: Drosophila melanogaster HDC05200 (HDC05200) gene, complete cds Length = 4612 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gctgctgttgctcctgctcct 145 ||||||||||||||||||||| Sbjct: 2864 gctgctgttgctcctgctcct 2884
>gb|AC091388.1|AC091388 Drosophila melanogaster, chromosome 2R, region 44C-44D, BAC clone BACR14B02, complete sequence Length = 194036 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gctgctgttgctcctgctcct 145 ||||||||||||||||||||| Sbjct: 148552 gctgctgttgctcctgctcct 148572
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 170 cgcggccggcgccggcgcgtgcgcggccg 198 ||||||| ||||||||||| ||||||||| Sbjct: 31788392 cgcggcccgcgccggcgcgcgcgcggccg 31788420
>gb|AC136146.4| Mus musculus BAC clone RP23-4H17 from chromosome 7, complete sequence Length = 209018 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ggcgccggcgcgtgcgcggcc 197 ||||||||||||||||||||| Sbjct: 199446 ggcgccggcgcgtgcgcggcc 199426
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.8 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 359 cacgggcgagggcatggccggcgcgcaggcgct 391 |||| ||||||||| |||||||||||||||||| Sbjct: 1513576 cacgtgcgagggca-ggccggcgcgcaggcgct 1513607
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 cggcgccgccgcgcccaccgt 430 ||||||||||||||||||||| Sbjct: 2557819 cggcgccgccgcgcccaccgt 2557839 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 gccggcgccggcgcgtgcgcggcc 197 |||||||||||||||| ||||||| Sbjct: 5297290 gccggcgccggcgcgtacgcggcc 5297267
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 170 cgcggccggcgccggcgcgtgcgcggccg 198 ||||||| ||||||||||| ||||||||| Sbjct: 84190 cgcggcccgcgccggcgcgcgcgcggccg 84218
>gb|AF487716.1| Aphis gossypii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 2025 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 158 gcgcgcggcgtccgcggccggcgccggcg 186 |||||| ||||||||||||| |||||||| Sbjct: 445 gcgcgccgcgtccgcggccgtcgccggcg 473
>gb|AY104839.1| Zea mays PCO137857 mRNA sequence Length = 1127 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 151 cgtccacgcgcgcggcgtccgcggccggc 179 |||||||||||||| | |||||||||||| Sbjct: 56 cgtccacgcgcgcgccctccgcggccggc 28
>gb|AE003837.3| Drosophila melanogaster chromosome 2R, section 13 of 73 of the complete sequence Length = 265215 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gctgctgttgctcctgctcct 145 ||||||||||||||||||||| Sbjct: 114109 gctgctgttgctcctgctcct 114129
>gb|AC006421.1|AC006421 Drosophila melanogaster, chromosome 2R, region 44C1-44C5, P1 clones DS08614 and DS00667, complete sequence Length = 100575 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gctgctgttgctcctgctcct 145 ||||||||||||||||||||| Sbjct: 63497 gctgctgttgctcctgctcct 63517
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cgatgccgcgccacatcgcgc 126 ||||||||||||||||||||| Sbjct: 3201171 cgatgccgcgccacatcgcgc 3201151
>emb|AL833803.8| Mouse DNA sequence from clone RP23-244H7 on chromosome 2, complete sequence Length = 226251 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gctgctgttgctcctgctcct 145 ||||||||||||||||||||| Sbjct: 149362 gctgctgttgctcctgctcct 149342 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gctgctgttgctcctgctcct 145 ||||||||||||||||||||| Sbjct: 149227 gctgctgttgctcctgctcct 149207
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 185 cgcgtgcgcggccgagaagttcccggcgg 213 |||||||||||| |||||||||| ||||| Sbjct: 3095006 cgcgtgcgcggctgagaagttcctggcgg 3094978
>gb|U73210.1|TAU73210 Triticum aestivum cold acclimation protein WCOR410b (Wcor410b) mRNA, complete cds Length = 1181 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 gcggccggcgccggcgcgtgc 191 ||||||||||||||||||||| Sbjct: 745 gcggccggcgccggcgcgtgc 725
>gb|AC101660.25| Mus musculus chromosome 15, clone RP23-4I22, complete sequence Length = 188464 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 acaagtcctcactcaccactg 71 ||||||||||||||||||||| Sbjct: 51172 acaagtcctcactcaccactg 51192
>ref|XM_482102.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4917 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 caagggctccggcgccgccgcgcc 424 ||||||||||||||||| |||||| Sbjct: 196 caagggctccggcgccggcgcgcc 173
>ref|NM_191908.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1698 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 gggctccggcgccgccgcgc 423 |||||||||||||||||||| Sbjct: 1374 gggctccggcgccgccgcgc 1393
>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004O15 map near R3342S, complete sequence Length = 140142 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cgctgctgttgctcctgctc 143 |||||||||||||||||||| Sbjct: 104988 cgctgctgttgctcctgctc 105007
>gb|AC116367.10| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0059H21 map R3342S, complete sequence Length = 133790 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cgctgctgttgctcctgctc 143 |||||||||||||||||||| Sbjct: 87843 cgctgctgttgctcctgctc 87862
>gb|AC154623.2| Mus musculus BAC clone RP23-327K7 from chromosome 13, complete sequence Length = 190884 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ctgctgttgctcctgctcct 145 |||||||||||||||||||| Sbjct: 105720 ctgctgttgctcctgctcct 105701
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ccgcggccggcgccggcgcg 188 |||||||||||||||||||| Sbjct: 1255965 ccgcggccggcgccggcgcg 1255984
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 tccggcgccgccgcgcccac 427 |||||||||||||||||||| Sbjct: 2268797 tccggcgccgccgcgcccac 2268816
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 ccggctacgtgccgctcggc 467 |||||||||||||||||||| Sbjct: 2983683 ccggctacgtgccgctcggc 2983702 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 ggcgtccacgcgcgcggcgtccgc 172 |||||| ||||||||||||||||| Sbjct: 2624957 ggcgtcgacgcgcgcggcgtccgc 2624934
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ccgcggccggcgccggcgcg 188 |||||||||||||||||||| Sbjct: 2249404 ccgcggccggcgccggcgcg 2249385
>gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, complete sequence Length = 187758 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ctgctgttgctcctgctcct 145 |||||||||||||||||||| Sbjct: 135283 ctgctgttgctcctgctcct 135264
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ggcatggccggcgcgcaggc 388 |||||||||||||||||||| Sbjct: 3952532 ggcatggccggcgcgcaggc 3952551
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ctgctgttgctcctgctcct 145 |||||||||||||||||||| Sbjct: 34133895 ctgctgttgctcctgctcct 34133914
>gb|AC131316.8| Mus musculus chromosome 1, clone RP23-302H1, complete sequence Length = 237076 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 tgctgttgctcctgctcctc 146 |||||||||||||||||||| Sbjct: 203258 tgctgttgctcctgctcctc 203277
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 158 gcgcgcggcgtccgcggccggcgccggc 185 |||||||||| |||||||||||||||| Sbjct: 1987251 gcgcgcggcggtcgcggccggcgccggc 1987278 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 gccggcgcgcaggcgctcgt 394 |||||||||||||||||||| Sbjct: 41472 gccggcgcgcaggcgctcgt 41491
>ref|XM_846699.1| PREDICTED: Canis familiaris similar to prostate tumor over expressed gene 1 (predicted) (LOC483946), mRNA Length = 540 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 cgcgctgctgttgctcctgctcct 145 |||||||||| ||||||||||||| Sbjct: 526 cgcgctgctgctgctcctgctcct 503
>emb|AL929444.6| Human DNA sequence from clone RP11-359B3 on chromosome 10 Contains a ribosomal protein S27 (metallopanstimulin 1) (MPS1, MPS-1) (RPS27) pseudogene, complete sequence Length = 50865 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 gggggccaacgggtgggtggcctg 346 |||||||||| ||||||||||||| Sbjct: 12070 gggggccaacaggtgggtggcctg 12047
>gb|AY597282.1| Pseudomonas viridiflava strain RMX23.1a pathogenicity island PAI-Region-2, partial sequence Length = 39285 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 ccggcgccgccgcgcccacc 428 |||||||||||||||||||| Sbjct: 13545 ccggcgccgccgcgcccacc 13564
>emb|AL512428.13| Human DNA sequence from clone RP11-373L11 on chromosome 6 Contains the 3' end of the C6orf32 gene for chromosome 6 open reading frame 32 (PL48, DIFF40, DIFF48) and a CpG island, complete sequence Length = 70800 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 tgctgttgctcctgctcctc 146 |||||||||||||||||||| Sbjct: 61138 tgctgttgctcctgctcctc 61119
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 154 ccacgcgcgcggcgtccgcggccggcgc 181 ||||||| |||||||||||| ||||||| Sbjct: 1161653 ccacgcgtgcggcgtccgcgcccggcgc 1161626
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcgcggcgtccgcggccggc 179 |||||||||||||||||||| Sbjct: 4781720 gcgcggcgtccgcggccggc 4781701
>gb|AY341855.1| Oryza sativa (japonica cultivar-group) WRKY14 mRNA, complete cds Length = 1947 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 gggctccggcgccgccgcgc 423 |||||||||||||||||||| Sbjct: 1461 gggctccggcgccgccgcgc 1480
>gb|AY341844.1| Oryza sativa (japonica cultivar-group) WRKY3 mRNA, complete cds Length = 1858 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 gggctccggcgccgccgcgc 423 |||||||||||||||||||| Sbjct: 1417 gggctccggcgccgccgcgc 1436
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 cggcgcgcaggcgctcgtgg 396 |||||||||||||||||||| Sbjct: 169566 cggcgcgcaggcgctcgtgg 169585
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ccgcggccggcgccggcgcg 188 |||||||||||||||||||| Sbjct: 320285 ccgcggccggcgccggcgcg 320266
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ccgcggccggcgccggcgcg 188 |||||||||||||||||||| Sbjct: 217465 ccgcggccggcgccggcgcg 217446
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ccgcggccggcgccggcgcg 188 |||||||||||||||||||| Sbjct: 202474 ccgcggccggcgccggcgcg 202455
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 ccggctacgtgccgctcggc 467 |||||||||||||||||||| Sbjct: 1162443 ccggctacgtgccgctcggc 1162462 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 ggcgtccacgcgcgcggcgtccgc 172 |||||| ||||||||||||||||| Sbjct: 804987 ggcgtcgacgcgcgcggcgtccgc 804964
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ccgcggccggcgccggcgcg 188 |||||||||||||||||||| Sbjct: 2125299 ccgcggccggcgccggcgcg 2125318
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 gctggcgttcgtggccgcgc 318 |||||||||||||||||||| Sbjct: 95987 gctggcgttcgtggccgcgc 96006
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome Length = 156789 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 ctccggcgccgccgcgcccaccgt 430 ||||||||||||||||||| |||| Sbjct: 122425 ctccggcgccgccgcgccccccgt 122402 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 407 ctccggcgccgccgcgcccaccgt 430 ||||||||||||||||||| |||| Sbjct: 3433 ctccggcgccgccgcgccccccgt 3456
>gb|AF448526.1| Mytilus galloprovincialis precollagen-D mRNA, complete cds Length = 2848 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ctgctgttgctcctgctcct 145 |||||||||||||||||||| Sbjct: 2130 ctgctgttgctcctgctcct 2111
>gb|AE005727.1| Caulobacter crescentus CB15 section 53 of 359 of the complete genome Length = 10545 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtccgcggccggcgccggcg 186 |||||||||||||||||||| Sbjct: 441 gtccgcggccggcgccggcg 422
>gb|AE011626.1| Xanthomonas axonopodis pv. citri str. 306, section 4 of 469 of the complete genome Length = 11366 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 gccggcgcgcaggcgctcgt 394 |||||||||||||||||||| Sbjct: 7816 gccggcgcgcaggcgctcgt 7835
>tpg|BK005019.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 16 (WRKY16) gene, complete cds Length = 4090 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 gggctccggcgccgccgcgc 423 |||||||||||||||||||| Sbjct: 3766 gggctccggcgccgccgcgc 3785
>dbj|AB218878.1| Streptomyces griseus genes for AraC-type transcriptional regulator, ABC-transport system, substrate-binding extracellular domain, ABC-transport system, membrane integral subunit, ABC-transport system, membrane integral subunit, ABC-transport system, ATP-binding protein, Cytochrome P-450, type III polyketide synthase, subtilisine-like serine protease, chitinase, partial and complete cds Length = 12095 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ccatcgcgttcccggccacc 500 |||||||||||||||||||| Sbjct: 8946 ccatcgcgttcccggccacc 8965
>gb|AC068556.10| Homo sapiens chromosome 10 clone RP11-415G6, complete sequence Length = 182913 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 323 gggggccaacgggtgggtggcctg 346 |||||||||| ||||||||||||| Sbjct: 135290 gggggccaacaggtgggtggcctg 135313
>gb|AC068060.5| Homo sapiens chromosome 10 clone RP11-359B3, complete sequence Length = 182912 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 gggggccaacgggtgggtggcctg 346 |||||||||| ||||||||||||| Sbjct: 47618 gggggccaacaggtgggtggcctg 47595
>ref|NM_078688.2| Drosophila melanogaster domeless CG14226-RA (dome), mRNA Length = 4877 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 tcgcgctgctgttgctcctgctcc 144 |||||||||||||||| ||||||| Sbjct: 3716 tcgcgctgctgttgctgctgctcc 3693
>gb|DQ355953.1| Oryza sativa (indica cultivar-group) cultivar Teqing receptor kinase (TRKd) pseudogene, complete sequence; and receptor kinase TRKa (TRKa), receptor kinase TRKe (TRKe), and receptor kinase TRKb (TRKb) genes, complete cds Length = 33301 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cgctgctgttgctcctgctc 143 |||||||||||||||||||| Sbjct: 25112 cgctgctgttgctcctgctc 25093
>gb|AY075427.1| Drosophila melanogaster LD46805 full length cDNA Length = 4814 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 tcgcgctgctgttgctcctgctcc 144 |||||||||||||||| ||||||| Sbjct: 3637 tcgcgctgctgttgctgctgctcc 3614
>gb|AC099011.1| Drosophila melanogaster, chromosome 2L, region 24C-24D, BAC clone BACR22M14, complete sequence Length = 173380 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ctgctgttgctcctgctcct 145 |||||||||||||||||||| Sbjct: 114809 ctgctgttgctcctgctcct 114828
>gb|AY129334.1| Mycobacteriophage Rosebush, complete genome Length = 67480 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 catcgcgttcccggccaccg 501 |||||||||||||||||||| Sbjct: 63079 catcgcgttcccggccaccg 63060
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 ccggctacgtgccgctcggc 467 |||||||||||||||||||| Sbjct: 1465503 ccggctacgtgccgctcggc 1465484
>gb|AC010671.8|AC010671 Drosophila melanogaster, chromosome X, region 18E-18F, BAC clone BACR33M08, complete sequence Length = 180263 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 tcgcgctgctgttgctcctgctcc 144 |||||||||||||||| ||||||| Sbjct: 74221 tcgcgctgctgttgctgctgctcc 74244
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cgctgctgttgctcctgctc 143 |||||||||||||||||||| Sbjct: 27757829 cgctgctgttgctcctgctc 27757810 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cgctgctgttgctcctgctc 143 |||||||||||||||||||| Sbjct: 27616985 cgctgctgttgctcctgctc 27616966
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cgtccacgcgcgcggcgtcc 170 |||||||||||||||||||| Sbjct: 23962627 cgtccacgcgcgcggcgtcc 23962608
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ctgctgttgctcctgctcct 145 |||||||||||||||||||| Sbjct: 34224367 ctgctgttgctcctgctcct 34224386
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gggctccggcgccgccgcgc 423 |||||||||||||||||||| Sbjct: 27190396 gggctccggcgccgccgcgc 27190377
>gb|AC008003.8|AC008003 Drosophila melanogaster, chromosome 2L, region 24D-24D, BAC clone BACR48D02, complete sequence Length = 181728 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ctgctgttgctcctgctcct 145 |||||||||||||||||||| Sbjct: 29463 ctgctgttgctcctgctcct 29482
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ctgctgttgctcctgctcct 145 |||||||||||||||||||| Sbjct: 97707 ctgctgttgctcctgctcct 97726
>gb|AE004963.1| Pseudomonas aeruginosa PAO1, section 524 of 529 of the complete genome Length = 11105 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 ggccaccgacctcgccgccg 513 |||||||||||||||||||| Sbjct: 7322 ggccaccgacctcgccgccg 7341
>dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0005G07 Length = 142850 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cgtccacgcgcgcggcgtcc 170 |||||||||||||||||||| Sbjct: 117554 cgtccacgcgcgcggcgtcc 117535
>dbj|AP004675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0709D11 Length = 146856 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 caagggctccggcgccgccgcgcc 424 ||||||||||||||||| |||||| Sbjct: 52205 caagggctccggcgccggcgcgcc 52228
>dbj|AP003750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1174_G05 Length = 111202 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cgtccacgcgcgcggcgtcc 170 |||||||||||||||||||| Sbjct: 4235 cgtccacgcgcgcggcgtcc 4216
>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003E08 Length = 135014 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gggctccggcgccgccgcgc 423 |||||||||||||||||||| Sbjct: 98074 gggctccggcgccgccgcgc 98055
>dbj|AP005443.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0011E04 Length = 136767 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 caagggctccggcgccgccgcgcc 424 ||||||||||||||||| |||||| Sbjct: 105093 caagggctccggcgccggcgcgcc 105116
>dbj|AK105647.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F08, full insert sequence Length = 4917 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 caagggctccggcgccgccgcgcc 424 ||||||||||||||||| |||||| Sbjct: 196 caagggctccggcgccggcgcgcc 173
>dbj|AK100155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019E12, full insert sequence Length = 1603 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ctgctgttgctcctgctcct 145 |||||||||||||||||||| Sbjct: 493 ctgctgttgctcctgctcct 474
>gb|AE003578.3| Drosophila melanogaster chromosome 2L, section 13 of 83 of the complete sequence Length = 295211 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ctgctgttgctcctgctcct 145 |||||||||||||||||||| Sbjct: 245374 ctgctgttgctcctgctcct 245393
>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete sequence Length = 346474 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 tcgcgctgctgttgctcctgctcc 144 |||||||||||||||| ||||||| Sbjct: 324134 tcgcgctgctgttgctgctgctcc 324157
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 ccggctacgtgccgctcggc 467 |||||||||||||||||||| Sbjct: 1804184 ccggctacgtgccgctcggc 1804165
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 370 gcatggccggcgcgcaggcgctcg 393 ||||||||||||| |||||||||| Sbjct: 3557991 gcatggccggcgcccaggcgctcg 3557968
>gb|AC004279.1|AC004279 Drosophila melanogaster DNA sequence (P1 DS06502 (D146)), complete sequence Length = 85338 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ctgctgttgctcctgctcct 145 |||||||||||||||||||| Sbjct: 61765 ctgctgttgctcctgctcct 61784
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cgctgctgttgctcctgctc 143 |||||||||||||||||||| Sbjct: 27781817 cgctgctgttgctcctgctc 27781798 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cgctgctgttgctcctgctc 143 |||||||||||||||||||| Sbjct: 27640973 cgctgctgttgctcctgctc 27640954
>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146686 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 cgacctcgccgccgactccg 519 |||||||||||||||||||| Sbjct: 101166 cgacctcgccgccgactccg 101185
>gb|AY870604.1| Oryza sativa (japonica cultivar-group) WRKY16 mRNA, complete cds Length = 1840 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 gggctccggcgccgccgcgc 423 |||||||||||||||||||| Sbjct: 1441 gggctccggcgccgccgcgc 1460
>gb|AY147847.1| Drosophila melanogaster cytokine receptor domeless (dome) mRNA, complete cds Length = 4805 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 tcgcgctgctgttgctcctgctcc 144 |||||||||||||||| ||||||| Sbjct: 3648 tcgcgctgctgttgctgctgctcc 3625
>emb|AJ420377.1|DME420377 Drosophila melanogaster mRNA for putative interleukine JAK/STAT receptor (dome gene) Length = 4830 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 tcgcgctgctgttgctcctgctcc 144 |||||||||||||||| ||||||| Sbjct: 3648 tcgcgctgctgttgctgctgctcc 3625
>dbj|AB032799.1| Chromobacterium violaceum violacein biosynthetic gene cluster (vio A, vio B, vio C, vio D), complete cds Length = 9077 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 370 gcatggccggcgcgcaggcgctcg 393 ||||||||||||| |||||||||| Sbjct: 8849 gcatggccggcgcccaggcgctcg 8872 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,031,914 Number of Sequences: 3902068 Number of extensions: 3031914 Number of successful extensions: 99169 Number of sequences better than 10.0: 108 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 90696 Number of HSP's gapped (non-prelim): 8467 length of query: 525 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 502 effective length of database: 17,143,297,704 effective search space: 8605935447408 effective search space used: 8605935447408 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
