ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart54e02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 186 bits (94), Expect = 5e-44 Identities = 139/154 (90%) Strand = Plus / Plus Query: 415 gctgcgacgtcttcagcggcagctgggtccgcgatgtcgacggctccgcggcggagggct 474 |||||||||||||||||||||||||||||||||| | || |||| || |||| || | Sbjct: 10078135 gctgcgacgtcttcagcggcagctgggtccgcgacgacggcggcggcggcgcggcggcgt 10078194 Query: 475 acaccgggtacaagtgcccggtcatcgacgcggagttcaactgccagctctatggccgcc 534 ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| | Sbjct: 10078195 acaccgggtacaactgcccggtcatcgacgcggagttcaactgccagctgtacggccggc 10078254 Query: 535 cggactccgactacctccggtaccgctggaagcc 568 ||||||||||||||||||||||||| |||||||| Sbjct: 10078255 cggactccgactacctccggtaccggtggaagcc 10078288 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 333 cacgccgtctcgctgtccgcctcggcgctcgccgtcgggctcgcgcggcgccaccgg 389 |||||| |||||||| | |||||||||||| || ||||||| ||||| ||||||||| Sbjct: 10078062 cacgccttctcgctgccggcctcggcgctctccttcgggctagcgcgccgccaccgg 10078118
>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05, complete sequence Length = 122116 Score = 186 bits (94), Expect = 5e-44 Identities = 139/154 (90%) Strand = Plus / Plus Query: 415 gctgcgacgtcttcagcggcagctgggtccgcgatgtcgacggctccgcggcggagggct 474 |||||||||||||||||||||||||||||||||| | || |||| || |||| || | Sbjct: 23756 gctgcgacgtcttcagcggcagctgggtccgcgacgacggcggcggcggcgcggcggcgt 23815 Query: 475 acaccgggtacaagtgcccggtcatcgacgcggagttcaactgccagctctatggccgcc 534 ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| | Sbjct: 23816 acaccgggtacaactgcccggtcatcgacgcggagttcaactgccagctgtacggccggc 23875 Query: 535 cggactccgactacctccggtaccgctggaagcc 568 ||||||||||||||||||||||||| |||||||| Sbjct: 23876 cggactccgactacctccggtaccggtggaagcc 23909 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 333 cacgccgtctcgctgtccgcctcggcgctcgccgtcgggctcgcgcggcgccaccgg 389 |||||| |||||||| | |||||||||||| || ||||||| ||||| ||||||||| Sbjct: 23683 cacgccttctcgctgccggcctcggcgctctccttcgggctagcgcgccgccaccgg 23739
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 186 bits (94), Expect = 5e-44 Identities = 139/154 (90%) Strand = Plus / Plus Query: 415 gctgcgacgtcttcagcggcagctgggtccgcgatgtcgacggctccgcggcggagggct 474 |||||||||||||||||||||||||||||||||| | || |||| || |||| || | Sbjct: 10076256 gctgcgacgtcttcagcggcagctgggtccgcgacgacggcggcggcggcgcggcggcgt 10076315 Query: 475 acaccgggtacaagtgcccggtcatcgacgcggagttcaactgccagctctatggccgcc 534 ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| | Sbjct: 10076316 acaccgggtacaactgcccggtcatcgacgcggagttcaactgccagctgtacggccggc 10076375 Query: 535 cggactccgactacctccggtaccgctggaagcc 568 ||||||||||||||||||||||||| |||||||| Sbjct: 10076376 cggactccgactacctccggtaccggtggaagcc 10076409 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 333 cacgccgtctcgctgtccgcctcggcgctcgccgtcgggctcgcgcggcgccaccgg 389 |||||| |||||||| | |||||||||||| || ||||||| ||||| ||||||||| Sbjct: 10076183 cacgccttctcgctgccggcctcggcgctctccttcgggctagcgcgccgccaccgg 10076239
>dbj|AK063646.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-H07, full insert sequence Length = 1399 Score = 186 bits (94), Expect = 5e-44 Identities = 139/154 (90%) Strand = Plus / Plus Query: 415 gctgcgacgtcttcagcggcagctgggtccgcgatgtcgacggctccgcggcggagggct 474 |||||||||||||||||||||||||||||||||| | || |||| || |||| || | Sbjct: 162 gctgcgacgtcttcagcggcagctgggtccgcgacgacggcggcggcggcgcggcggcgt 221 Query: 475 acaccgggtacaagtgcccggtcatcgacgcggagttcaactgccagctctatggccgcc 534 ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| | Sbjct: 222 acaccgggtacaactgcccggtcatcgacgcggagttcaactgccagctgtacggccggc 281 Query: 535 cggactccgactacctccggtaccgctggaagcc 568 ||||||||||||||||||||||||| |||||||| Sbjct: 282 cggactccgactacctccggtaccggtggaagcc 315 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 333 cacgccgtctcgctgtccgcctcggcgctcgccgtcgggctcgcgcggcgccaccgg 389 |||||| |||||||| | |||||||||||| || ||||||| ||||| ||||||||| Sbjct: 89 cacgccttctcgctgccggcctcggcgctctccttcgggctagcgcgccgccaccgg 145
>gb|AC163329.6| Mus musculus chromosome 5, clone RP24-294K15, complete sequence Length = 186890 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 84 cctcccctgccctgccctgcccagt 108 ||||||||||||||||||||||||| Sbjct: 60407 cctcccctgccctgccctgcccagt 60383 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 1361 ccctgccctgccctgcccag 1342
>gb|AC107709.12| Mus musculus chromosome 5, clone RP23-60E7, complete sequence Length = 256771 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 84 cctcccctgccctgccctgcccagt 108 ||||||||||||||||||||||||| Sbjct: 73128 cctcccctgccctgccctgcccagt 73152 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 132175 ccctgccctgccctgcccag 132194
>gb|AC098563.6| Rattus norvegicus 1 BAC CH230-123A15 (Children's Hospital Oakland Research Institute) complete sequence Length = 250414 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 84 cctcccctgccctgccctgccca 106 ||||||||||||||||||||||| Sbjct: 54045 cctcccctgccctgccctgccca 54023
>emb|AL137073.13| Human DNA sequence from clone RP11-404F11 on chromosome 9p23-24.1 Contains a novel gene encoding a protein similar to bacterial N-acetylneuraminic acid condensing enzyme (NEUB) and 3' end of the TBCID2 gene, a TRIM14 gene encoding tripartite motif-containing 14 (KIAA0129), the CORO2A gene encoding Coronin 2A (actin-binding protein), TBC1D2 gene encoding TBC1 domain family, member 2 (PARIS1, PARIS-1,DKFZP761D1823, DKFZp761D1823), and 4 CpG islands, complete sequence Length = 201300 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 83 acctcccctgccctgccctgccc 105 ||||||||||||||||||||||| Sbjct: 122002 acctcccctgccctgccctgccc 122024
>emb|AL035690.10|HS202I21 Human DNA sequence from clone RP1-202I21 on chromosome 6p21.1-21.2 Contains a novel gene (FLJ11101, DKFZp434H012), a pseudogene similar to part of breast cancer antigen NY-BR-1, the GLP1R gene for glucagon-like peptide 1 receptor, a 40S ribosomal protein S2 (RPS2) pseudogene, the 3' part of the DNAH8 gene for dynein axonemal heavy polypeptide 8 and CpG islands, complete sequence Length = 142665 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccagtcg 110 ||||||||||||||||||||||| Sbjct: 122939 ccctgccctgccctgcccagtcg 122917
>emb|BX883043.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 2/11 Length = 347664 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 83 acctcccctgccctgccctgccc 105 ||||||||||||||||||||||| Sbjct: 42042 acctcccctgccctgccctgccc 42020 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 42032 ccctgccctgccctgcccag 42013
>gb|AC120734.5| Rattus norvegicus BAC CH230-220D1 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 232990 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 83 acctcccctgccctgccctgccc 105 ||||||||||||||||||||||| Sbjct: 124853 acctcccctgccctgccctgccc 124875 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 124863 ccctgccctgccctgcccag 124882
>gb|AF111169.2|AF111169 Homo sapiens chromosome 14 BAC containing gene for KIAA0759 and other possible new transcripts, complete sequence Length = 183916 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 83 acctcccctgccctgccctgccc 105 ||||||||||||||||||||||| Sbjct: 56781 acctcccctgccctgccctgccc 56803
>emb|X17012.1|RNIGF2 Rat IGFII gene for insulin-like growth factor II Length = 30000 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 84 cctcccctgccctgccctgccca 106 ||||||||||||||||||||||| Sbjct: 13518 cctcccctgccctgccctgccca 13496
>emb|AL732413.4| Mouse DNA sequence from clone RP23-366N13 on chromosome 2, complete sequence Length = 111921 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 83 acctcccctgccctgccctgccc 105 ||||||||||||||||||||||| Sbjct: 29947 acctcccctgccctgccctgccc 29925
>gb|AC164419.3| Mus musculus chromosome 5, clone RP23-309G12, complete sequence Length = 159565 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 38057 cctcccctgccctgccctgccc 38078 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tcccctgccctgccctgccc 105 |||||||||||||||||||| Sbjct: 38106 tcccctgccctgccctgccc 38125
>gb|AC154573.2| Mus musculus BAC clone RP23-398O19 from chromosome 14, complete sequence Length = 197419 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 50411 cctcccctgccctgccctgccc 50432
>gb|AC102446.8| Mus musculus chromosome 5, clone RP24-201G17, complete sequence Length = 176748 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 93120 cctcccctgccctgccctgccc 93141 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tcccctgccctgccctgccc 105 |||||||||||||||||||| Sbjct: 93169 tcccctgccctgccctgccc 93188
>gb|AC161374.6| Mus musculus BAC clone RP23-266O23 from chromosome 14, complete sequence Length = 202929 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 188792 cctcccctgccctgccctgccc 188813
>gb|AC129590.4| Mus musculus BAC clone RP24-428B12 from chromosome 14, complete sequence Length = 180177 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 70224 cctcccctgccctgccctgccc 70245
>gb|AC124761.4| Mus musculus BAC clone RP23-142G18 from 6, complete sequence Length = 182921 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 106858 cctcccctgccctgccctgccc 106837
>emb|AL158822.19| Human DNA sequence from clone RP11-100C15 on chromosome 9q34.2-34.3 Contains the 3' end of a novel gene containing DKFZp434G2311, the KCNT1 gene for member 1 of the potassium channel subfamily T, the 3' end of a novel gene, part of the gene for a novel protein similar to mouse RIKEN 9230102I19 (9230102I19RIK) and nine CpG islands, complete sequence Length = 187336 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccagtc 109 |||||||||||||||||||||| Sbjct: 49462 ccctgccctgccctgcccagtc 49441
>gb|AC116715.22| Mus musculus chromosome 5, clone RP23-129N14, complete sequence Length = 193245 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 53765 cctcccctgccctgccctgccc 53744
>gb|AC131405.5| Rattus norvegicus BAC CH230-179I7 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 217197 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 33545 cctcccctgccctgccctgccc 33524
>gb|AC154572.2| Mus musculus BAC clone RP23-392G15 from chromosome 13, complete sequence Length = 185090 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 52404 cctcccctgccctgccctgccc 52425
>gb|AC046131.35|AC046131 Homo sapiens 12 BAC RP11-847A19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111131 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 24303 cctcccctgccctgccctgccc 24282 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 24263 cctcccctgccctgccctgccc 24242
>gb|AC120057.9| Homo sapiens chromosome 17, clone CTD-2545G14, complete sequence Length = 198821 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 86 tcccctgccctgccctgcccag 107 |||||||||||||||||||||| Sbjct: 66863 tcccctgccctgccctgcccag 66884
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 18061333 cctcccctgccctgccctgccc 18061312 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 139153 ccctgccctgccctgcccag 139172
>gb|BC035730.1| Homo sapiens, clone IMAGE:5724518, mRNA Length = 4065 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccagtc 109 |||||||||||||||||||||| Sbjct: 223 ccctgccctgccctgcccagtc 202
>dbj|AP005285.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F04 Length = 139563 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 122927 cctcccctgccctgccctgccc 122906
>dbj|BS000203.1| Pan troglodytes chromosome 22 clone:PTB-155H17, map 22, complete sequences Length = 196470 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 112403 cctcccctgccctgccctgccc 112424
>gb|AC154408.2| Mus musculus BAC clone RP24-259A5 from 16, complete sequence Length = 158312 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 102379 cctcccctgccctgccctgccc 102358
>gb|AC145072.9| Mus musculus chromosome 5, clone RP24-94L5, complete sequence Length = 217930 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccagtc 109 |||||||||||||||||||||| Sbjct: 172218 ccctgccctgccctgcccagtc 172239
>gb|AC006123.1|AC006123 Homo sapiens chromosome 19, cosmid R28177, complete sequence Length = 45858 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 35822 cctcccctgccctgccctgccc 35843
>dbj|AP005792.5| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1533H12, complete sequence Length = 141371 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 107963 cctcccctgccctgccctgccc 107942
>gb|AC003107.1|AC003107 Human DNA from chromosome 19-specific cosmid R30064 containing the COMP gene, genomic sequence, complete sequence Length = 46275 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 1944 cctcccctgccctgccctgccc 1965
>emb|AL831794.6| Mouse DNA sequence from clone RP23-114B13 on chromosome 2, complete sequence Length = 223128 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 cctcccctgccctgccctgccc 105 |||||||||||||||||||||| Sbjct: 93729 cctcccctgccctgccctgccc 93708
>gb|AC164302.2| Mus musculus BAC clone RP23-286N12 from chromosome 16, complete sequence Length = 192765 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 ctcccctgccctgccctgccc 105 ||||||||||||||||||||| Sbjct: 79184 ctcccctgccctgccctgccc 79204
>gb|BT016752.1| Zea mays clone Contig585 mRNA sequence Length = 1421 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 ctcccctgccctgccctgccc 105 ||||||||||||||||||||| Sbjct: 82 ctcccctgccctgccctgccc 102
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 ctcccctgccctgccctgccc 105 ||||||||||||||||||||| Sbjct: 1483960 ctcccctgccctgccctgccc 1483940
>ref|XM_420078.1| PREDICTED: Gallus gallus similar to GalNAc alpha 2,6-sialyltransferase (LOC422075), mRNA Length = 1958 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tgctcgccgtgctgctgctcc 333 ||||||||||||||||||||| Sbjct: 209 tgctcgccgtgctgctgctcc 229
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 gctcgccgtcgggctcgcgcg 379 ||||||||||||||||||||| Sbjct: 2008851 gctcgccgtcgggctcgcgcg 2008831
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 gcgctcgccgtcgggctcgcg 377 ||||||||||||||||||||| Sbjct: 2021096 gcgctcgccgtcgggctcgcg 2021076
>gb|AC145557.3| Mus musculus BAC clone RP23-313I19 from chromosome 19, complete sequence Length = 226099 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 cctcccctgccctgccctgcc 104 ||||||||||||||||||||| Sbjct: 213843 cctcccctgccctgccctgcc 213863
>ref|NM_176662.1| Bos taurus protein kinase C substrate 80K-H (PRKCSH), mRNA Length = 2099 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccagt 108 ||||||||||||||||||||| Sbjct: 1748 ccctgccctgccctgcccagt 1768
>gb|AF299077.1| Bos taurus vacuolar system associated protein-60 (VASAP-60) gene, promoter region and complete cds Length = 14392 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccagt 108 ||||||||||||||||||||| Sbjct: 13809 ccctgccctgccctgcccagt 13829
>gb|AC137749.11| Mus musculus chromosome 6, clone RP23-69C16, complete sequence Length = 293695 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 ctcccctgccctgccctgccc 105 ||||||||||||||||||||| Sbjct: 122708 ctcccctgccctgccctgccc 122688
>gb|AC129182.4| Mus musculus BAC clone RP23-340P24 from chromosome 19, complete sequence Length = 187601 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 cctcccctgccctgccctgcc 104 ||||||||||||||||||||| Sbjct: 44472 cctcccctgccctgccctgcc 44492
>gb|AC089999.20| Homo sapiens 12 BAC RP11-545P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 199522 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 cctgccctgccctgcccagtc 109 ||||||||||||||||||||| Sbjct: 11659 cctgccctgccctgcccagtc 11679
>gb|U49178.2|BTU49178 Bos taurus vacuolar system associated protein-60 mRNA, complete cds Length = 2099 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccagt 108 ||||||||||||||||||||| Sbjct: 1748 ccctgccctgccctgcccagt 1768
>gb|AC036121.11| Mus musculus chromosome 6, clone RP23-158O9, complete sequence Length = 215685 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 ctcccctgccctgccctgccc 105 ||||||||||||||||||||| Sbjct: 14211 ctcccctgccctgccctgccc 14191
>gb|AC092519.2| Felis catus clone RP86-328F23, complete sequence Length = 178238 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 ctcccctgccctgccctgccc 105 ||||||||||||||||||||| Sbjct: 114654 ctcccctgccctgccctgccc 114674
>emb|AL159972.8| Human DNA sequence from clone RP11-157H4 on chromosome 13 Contains part of the KLF12 gene for Kruppel-like factor 12, complete sequence Length = 149512 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 tctccttgtctttgtggaaga 288 ||||||||||||||||||||| Sbjct: 102957 tctccttgtctttgtggaaga 102937
>emb|AL096866.10|HSJ247G22 Human DNA sequence from clone RP1-247G22 on chromosome 6p12.2-21.2, complete sequence Length = 120487 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccagt 108 ||||||||||||||||||||| Sbjct: 108445 ccctgccctgccctgcccagt 108425
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 gcgctcgccgtcgggctcgcg 377 ||||||||||||||||||||| Sbjct: 182559 gcgctcgccgtcgggctcgcg 182539
>emb|AL606829.13| Mouse DNA sequence from clone RP23-10M12 on chromosome 11 Contains a novel gene (MOR280-1) similar to the olfactory receptor family, a novel gene (D330012D11Rik), the Zfp62 gene for zinc finger protein 62, the Mgat1 gene for mannoside acetylglucosaminyltransferase 1, a novel gene (MOR256-24) similar to the olfactory receptor family, a novel gene (MOR256-25) similar to the olfactory receptor family, a novel gene (LOC216715) similar to the olfactory receptor MOR256 family, a novel gene (MOR256-27) similar to the olfactory receptor family, a novel gene (MOR256-2) similar to the olfactory receptor family and three CpG islands, complete sequence Length = 203286 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 ctcccctgccctgccctgccc 105 ||||||||||||||||||||| Sbjct: 99660 ctcccctgccctgccctgccc 99640
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 ctcgctgtccgcctcggcgct 361 ||||||||||||||||||||| Sbjct: 1182395 ctcgctgtccgcctcggcgct 1182375
>gb|AC087330.6| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-3M10, complete sequence Length = 206093 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 cccctgccctgccctgcccag 107 ||||||||||||||||||||| Sbjct: 172119 cccctgccctgccctgcccag 172099
>gb|BC104524.1| Bos taurus protein kinase C substrate 80K-H, mRNA (cDNA clone MGC:129131 IMAGE:8122210), complete cds Length = 2114 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccagt 108 ||||||||||||||||||||| Sbjct: 1734 ccctgccctgccctgcccagt 1754
>gb|AC068580.23| Homo sapiens chromosome 11, clone RP11-295K3, complete sequence Length = 120298 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 cccctgccctgccctgcccag 107 ||||||||||||||||||||| Sbjct: 54725 cccctgccctgccctgcccag 54745
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 ctcccctgccctgccctgccc 105 ||||||||||||||||||||| Sbjct: 2305054 ctcccctgccctgccctgccc 2305034
>emb|BX255955.3| Zebrafish DNA sequence from clone CH211-249G22 in linkage group 18, complete sequence Length = 146105 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 ctcccctgccctgccctgccc 105 ||||||||||||||||||||| Sbjct: 5665 ctcccctgccctgccctgccc 5685
>emb|AL929264.4| Zebrafish DNA sequence from clone CH211-59C24 in linkage group 18, complete sequence Length = 171914 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 ctcccctgccctgccctgccc 105 ||||||||||||||||||||| Sbjct: 91229 ctcccctgccctgccctgccc 91209
>gb|U73169.1|U73169 Homo sapiens cosmid clone LUCA16 from 3p21.3, complete sequence Length = 26816 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 cccctgccctgccctgcccag 107 ||||||||||||||||||||| Sbjct: 3547 cccctgccctgccctgcccag 3567
>gb|AF052167.1|AF052167 Homo sapiens clone 24749 and 24750 mRNA sequences Length = 1523 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 atacctcccctgccctgccctgccc 105 ||||| ||||||||||||||||||| Sbjct: 337 ataccacccctgccctgccctgccc 361
>gb|AC151735.3| Mus musculus BAC clone RP23-24D16 from 9, complete sequence Length = 201762 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccagt 108 ||||||||||||||||||||| Sbjct: 69467 ccctgccctgccctgcccagt 69447
>gb|AC127328.6| Mus musculus BAC clone RP23-259B8 from 6, complete sequence Length = 186950 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 ctcccctgccctgccctgccc 105 ||||||||||||||||||||| Sbjct: 179012 ctcccctgccctgccctgccc 178992
>gb|AC140264.2| Mus musculus BAC clone RP23-316F10 from 10, complete sequence Length = 176292 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 tcccctgccctgccctgccca 106 ||||||||||||||||||||| Sbjct: 79796 tcccctgccctgccctgccca 79776
>gb|AC140392.3| Mus musculus BAC clone RP24-89F9 from chromosome 9, complete sequence Length = 225973 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccagt 108 ||||||||||||||||||||| Sbjct: 191681 ccctgccctgccctgcccagt 191661
>gb|M63138.1|HUMCATD5 Human cathepsin D (catD) gene, exons 7, 8, and 9 Length = 2062 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 cccctgccctgccctgcccag 107 ||||||||||||||||||||| Sbjct: 1770 cccctgccctgccctgcccag 1790
>gb|AC103673.8| Mus musculus chromosome 1, clone RP24-336F10, complete sequence Length = 187158 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 27582 ccctgccctgccctgcccag 27601
>gb|AC119220.11| Mus musculus chromosome 1, clone RP24-201K16, complete sequence Length = 162827 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tcccctgccctgccctgccc 105 |||||||||||||||||||| Sbjct: 25635 tcccctgccctgccctgccc 25616
>gb|AC123697.19| Mus musculus chromosome 5, clone RP23-329M7, complete sequence Length = 183171 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 tacctcccctgccctgccct 101 |||||||||||||||||||| Sbjct: 113560 tacctcccctgccctgccct 113579
>gb|AC164397.6| Mus musculus chromosome 1, clone RP23-276M15, complete sequence Length = 196086 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 136720 ccctgccctgccctgcccag 136701
>gb|AC152824.4| Mus musculus BAC clone RP24-276N7 from chromosome 5, complete sequence Length = 194291 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 acctcccctgccctgccctgccca 106 |||| ||||||||||||||||||| Sbjct: 85106 acctgccctgccctgccctgccca 85129
>gb|AF125183.1| Homo sapiens H19 gene, complete sequence Length = 25738 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 20669 ccctgccctgccctgcccag 20688 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 20634 ccctgccctgccctgcccag 20653
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cctcggcgctcgccgtcgggctcg 375 |||||||||||||| ||||||||| Sbjct: 2767747 cctcggcgctcgccttcgggctcg 2767770
>gb|AC125252.7| Mus musculus chromosome 5, clone RP23-388M10, complete sequence Length = 212724 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ctttccctctccttgtcttt 280 |||||||||||||||||||| Sbjct: 171864 ctttccctctccttgtcttt 171845
>gb|AC116151.10| Mus musculus chromosome 5, clone RP24-84G9, complete sequence Length = 204954 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tcccctgccctgccctgccc 105 |||||||||||||||||||| Sbjct: 57548 tcccctgccctgccctgccc 57529
>gb|AC161262.2| Mus musculus BAC clone RP23-325G1 from chromosome 9, complete sequence Length = 204750 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 acctcccctgccctgccctgccca 106 |||| ||||||||||||||||||| Sbjct: 41909 acctgccctgccctgccctgccca 41886
>gb|AC138382.10| Mus musculus chromosome 1, clone RP24-400E14, complete sequence Length = 136819 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tcccctgccctgccctgccc 105 |||||||||||||||||||| Sbjct: 10447 tcccctgccctgccctgccc 10466
>ref|XM_616470.2| PREDICTED: Bos taurus similar to kinase non-catalytic C-lobe domain (KIND) containing 1 (LOC536342), mRNA Length = 4464 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 3681 ccctgccctgccctgcccag 3700
>gb|AC129162.5| Rattus norvegicus 9 BAC CH230-108L13 (Children's Hospital Oakland Research Institute) complete sequence Length = 245677 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tcccctgccctgccctgccc 105 |||||||||||||||||||| Sbjct: 96506 tcccctgccctgccctgccc 96525
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 tgatcgattcgtcggccggt 227 |||||||||||||||||||| Sbjct: 4297756 tgatcgattcgtcggccggt 4297775
>gb|AC116705.11| Mus musculus chromosome 5, clone RP23-26P10, complete sequence Length = 213155 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 acctcccctgccctgccctgccca 106 |||| ||||||||||||||||||| Sbjct: 4961 acctgccctgccctgccctgccca 4938
>ref|XM_865304.1| PREDICTED: Bos taurus similar to RAS-like, family 12 protein, transcript variant 1 (LOC614252), mRNA Length = 1488 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 cccctgccctgccctgccca 106 |||||||||||||||||||| Sbjct: 1285 cccctgccctgccctgccca 1266
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tgctcgccgtgctgctgctc 332 |||||||||||||||||||| Sbjct: 15483 tgctcgccgtgctgctgctc 15502
>ref|NM_052876.2| Homo sapiens BTB (POZ) domain containing 14B (BTBD14B), mRNA Length = 4556 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 3045 ccctgccctgccctgcccag 3026
>gb|AC149030.1| Dasypus novemcinctus clone VMRC5-81F18, complete sequence Length = 154373 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 28388 ccctgccctgccctgcccag 28369
>gb|AC102689.10| Mus musculus chromosome 12, clone RP24-142L2, complete sequence Length = 203221 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tcccctgccctgccctgccc 105 |||||||||||||||||||| Sbjct: 131233 tcccctgccctgccctgccc 131214
>gb|BC055396.1| Homo sapiens BTB (POZ) domain containing 14B, mRNA (cDNA clone MGC:61553 IMAGE:6142288), complete cds Length = 4499 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 2984 ccctgccctgccctgcccag 2965
>ref|XM_756491.1| Ustilago maydis 521 hypothetical protein (UM05437.1) partial mRNA Length = 1878 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cccaccgcagcaagagagtt 186 |||||||||||||||||||| Sbjct: 1692 cccaccgcagcaagagagtt 1711
>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6 through 10 and partial cds Length = 688489 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 201317 ccctgccctgccctgcccag 201298
>ref|XM_538511.2| PREDICTED: Canis familiaris similar to Neutral amino acid transporter A (SATT) (Alanine/serine/cysteine/ threonine transporter) (ASCT1) (LOC481391), mRNA Length = 1590 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 cgcctcggcgctcgccgtcg 369 |||||||||||||||||||| Sbjct: 372 cgcctcggcgctcgccgtcg 391
>gb|AC132474.3| Mus musculus BAC clone RP23-114G13 from chromosome 9, complete sequence Length = 220976 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 218200 ccctgccctgccctgcccag 218219
>gb|AC138225.11| Mus musculus chromosome 1, clone RP23-164F17, complete sequence Length = 239758 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 122339 ccctgccctgccctgcccag 122358
>emb|CR956377.9| Pig DNA sequence from clone PigE-220E19 on chromosome 7, complete sequence Length = 222390 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 70100 ccctgccctgccctgcccag 70081
>gb|AC125059.4| Mus musculus BAC clone RP23-404P13 from chromosome 19, complete sequence Length = 189613 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 159330 ccctgccctgccctgcccag 159349 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 159185 ccctgccctgccctgcccag 159204
>gb|AC122273.4| Mus musculus BAC clone RP23-228B2 from 9, complete sequence Length = 196627 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 136900 ccctgccctgccctgcccag 136919 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 136819 ccctgccctgccctgcccag 136838
>gb|AC116179.6| Mus musculus BAC clone RP23-272C6 from 10, complete sequence Length = 195123 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 174684 ccctgccctgccctgcccag 174703
>gb|AC117756.8| Mus musculus chromosome 1, clone RP24-419N8, complete sequence Length = 174783 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 166417 ccctgccctgccctgcccag 166436
>gb|AC102431.7| Mus musculus chromosome 14, clone RP24-106J1, complete sequence Length = 157923 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 109678 ccctgccctgccctgcccag 109697
>emb|AL391845.49| Human DNA sequence from clone RP11-547D24 on chromosome 1 Contains the 3' end of a novel gene (LOC339459), the GABRD gene for gamma-aminobutyric acid (GABA) A receptor delta, two novel genes the 5' end of the PRKCZ gene for protein kinase C, zeta and seven CpG islands, complete sequence Length = 132884 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 9251 ccctgccctgccctgcccag 9270
>emb|AL365199.11| Human DNA sequence from clone RP11-124O11 on chromosome 10 Contains two novel genes (FLJ36774) and five CpG islands, complete sequence Length = 158335 Score = 40.1 bits (20), Expect = 7.7 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 77 gcacatacctcccctgccctgccctgcccagt 108 ||||||||| |||||||||| ||||||||||| Sbjct: 136500 gcacatacc-cccctgcccttccctgcccagt 136470
>emb|AL356472.17| Human DNA sequence from clone RP11-344B24 on chromosome 9 Contains the 5' end of the BAG1 gene for BCL2-associated athanogene, a novel gene (HSPC177), the 5' end of the NFX1 gene for nuclear transcription factor, X-box binding 1 and 2 CpG islands, complete sequence Length = 98593 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 30807 ccctgccctgccctgcccag 30788
>emb|AL139289.6| Human DNA sequence from clone RP1-92O14 on chromosome 1p33-34.2 Contains the 3' end of the TIE gene for tyrosine kinase with immunoglobulin and epidermal growth factor homology domains, the MPL gene for myeloproliferative leukemia virus oncogene, two novel genes, the CDC20 gene for CDC20 cell division cycle 20 homolog (S. cerevisiae), the ELOVL1 gene for elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1, the MED8 gene for mediator of RNA polymerase II transcription subunit 8 homolog (yeast) and the 5' end of the gene for a novel protein (LOC149469), complete sequence Length = 90433 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 48769 ccctgccctgccctgcccag 48750
>emb|AL096814.26|HSDJ139D8 Human DNA sequence from clone RP1-139D8 on chromosome 6p12.1-21.1 Contains genes for GUCA1A (guanylate cyclase activator 1A) and GUCA1B (guanylate cyclase activator 1B) both from retina, the 3' end of the TReP-132 gene for zinc finger transcription regulating protein, the MRPS10 gene for mitochondrial ribosomal protein S10, the 5' end the gene for a novel protein, the gene for a novel protein and two CpG Islands, complete sequence Length = 167078 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 20816 ccctgccctgccctgcccag 20835
>emb|AL033527.26|HS118J21 Human DNA sequence from clone RP1-118J21 on chromosome 1p34.1-35.3 Contains the 5' end of the BMP8B gene for bone morphogenetic protein 8b (osteogenic protein 2), the 3' end of the PPIE gene for peptidylprolyl isomerase E (cyclophilin E), the OXCT2 gene for 3-oxoacid CoA transferase 2, the gene for tRNA isopentenyltransferase 1 (IPT), the MYCL1 gene for v-myc myelocytomatosis viral oncogene homolog 1 lung carcinoma derived (avian), a novel gene and seven CpG islands, complete sequence Length = 166496 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 29392 ccctgccctgccctgcccag 29411
>gb|AC051649.21| Homo sapiens chromosome 11, clone RP11-534I22, complete sequence Length = 188519 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 10737 ccctgccctgccctgcccag 10756 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 10702 ccctgccctgccctgcccag 10721
>gb|AC092943.5| Homo sapiens 3 BAC RP11-564C24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 89885 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tcccctgccctgccctgccc 105 |||||||||||||||||||| Sbjct: 77547 tcccctgccctgccctgccc 77528
>gb|AC123789.6| Homo sapiens chromosome 11, clone RP5-998N23, complete sequence Length = 137691 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 95230 ccctgccctgccctgcccag 95249 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 95195 ccctgccctgccctgcccag 95214
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 tgatcgattcgtcggccggt 227 |||||||||||||||||||| Sbjct: 138701 tgatcgattcgtcggccggt 138720
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 cgcctcggcgctcgccgtcg 369 |||||||||||||||||||| Sbjct: 206465 cgcctcggcgctcgccgtcg 206484
>gb|AC163439.3| Mus musculus chromosome 8, clone RP23-390F12, complete sequence Length = 205063 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 53964 ccctgccctgccctgcccag 53945
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 tgatcgattcgtcggccggt 227 |||||||||||||||||||| Sbjct: 174706 tgatcgattcgtcggccggt 174725
>gb|AY955840.1| Paracoccidioides brasiliensis strain Pb18 mitochondrion, complete genome Length = 71335 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 tctcctaataattctctctt 131 |||||||||||||||||||| Sbjct: 31855 tctcctaataattctctctt 31836
>gb|AY131229.2| Streptomyces sp. 139 exopolysaccharide gene cluster, complete sequence Length = 31310 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 gctcgccgtgctgctgctcc 333 |||||||||||||||||||| Sbjct: 21926 gctcgccgtgctgctgctcc 21945
>emb|AL807825.5| Mouse DNA sequence from clone RP23-453B22 on chromosome 11 Contains a transformer 2 alpha homolog (Drosophila) (Tra2a) pseudogene, three novel genes, the Sf3a1 gene for splicing factor 3a subunit 1, the ortholog of human EBP50-PDZ interactor EPI64, a ribosomal protein L18a (Rpl18a) pseudogene, the Osm gene for oncostatin M and two CpG islands, complete sequence Length = 116081 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 22203 ccctgccctgccctgcccag 22184
>gb|AC010068.8| Drosophila melanogaster 3L BAC RP98-15K24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178607 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tcccctgccctgccctgccc 105 |||||||||||||||||||| Sbjct: 64639 tcccctgccctgccctgccc 64658
>gb|AC093420.2| Homo sapiens chromosome 1 clone RP11-282K6, complete sequence Length = 193766 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 182748 ccctgccctgccctgcccag 182729
>gb|AF087017.1| Homo sapiens H19 gene, complete sequence Length = 40558 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 18906 ccctgccctgccctgcccag 18925 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 18871 ccctgccctgccctgcccag 18890
>emb|CR623895.1| full-length cDNA clone CS0DM010YK16 of Fetal liver of Homo sapiens (human) Length = 1567 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 155 ccctgccctgccctgcccag 136
>dbj|AK123056.1| Homo sapiens cDNA FLJ41061 fis, clone THYMU1000074 Length = 1811 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 350 ccctgccctgccctgcccag 331
>dbj|AK097197.1| Homo sapiens cDNA FLJ39878 fis, clone SPLEN2016045, moderately similar to Homo sapiens mRNA for Hrs Length = 3103 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 226 ccctgccctgccctgcccag 245
>dbj|AK094702.1| Homo sapiens cDNA FLJ37383 fis, clone BRAMY2026168 Length = 3095 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 1652 ccctgccctgccctgcccag 1633
>gb|AC023789.8| Mus musculus chromosome 4 clone RP23-43A16, complete sequence Length = 146120 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ctgccctgccctgcccagtc 109 |||||||||||||||||||| Sbjct: 37214 ctgccctgccctgcccagtc 37195
>gb|AC046168.12| Homo sapiens chromosome 15, clone RP11-307C19, complete sequence Length = 180484 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tcccctgccctgccctgccc 105 |||||||||||||||||||| Sbjct: 57722 tcccctgccctgccctgccc 57741
>dbj|AK147307.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1011K08 product:hypothetical GCN5-related N-acetyltransferase containing protein, full insert sequence Length = 6527 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 6131 ccctgccctgccctgcccag 6150
>gb|AC001228.1|HSAC001228 244Kb Contig from Human Chromosome 11p15.5 spanning D11S1 through D11S25, complete sequence Length = 244254 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 183921 ccctgccctgccctgcccag 183940
>dbj|AK147703.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1110F02 product:hypothetical GCN5-related N-acetyltransferase containing protein, full insert sequence Length = 5860 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 5468 ccctgccctgccctgcccag 5487
>dbj|AK147594.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1085L14 product:hypothetical GCN5-related N-acetyltransferase containing protein, full insert sequence Length = 5805 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 5409 ccctgccctgccctgcccag 5428
>gb|AC090493.4| Genomic sequence for Mus musculus, clone RP23-201D19,, complete sequence Length = 208651 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 153858 ccctgccctgccctgcccag 153877
>gb|AC020904.7| Homo sapiens chromosome 19 clone CTB-52I2, complete sequence Length = 148824 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 ctcccctgccctgccctgcccagt 108 |||||||||||||||| ||||||| Sbjct: 18142 ctcccctgccctgcccagcccagt 18119
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 tcgacggctccgcggcggag 470 |||||||||||||||||||| Sbjct: 773202 tcgacggctccgcggcggag 773221
>tpg|BK000362.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M82 transposase gene, complete cds Length = 16854 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 10381 ccctgccctgccctgcccag 10400
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 cgctcgccgtcgggctcgcg 377 |||||||||||||||||||| Sbjct: 2869644 cgctcgccgtcgggctcgcg 2869625
>dbj|AK004167.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110038O08 product:unclassifiable, full insert sequence Length = 878 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 486 ccctgccctgccctgcccag 505
>gb|AC011446.6|AC011446 Homo sapiens chromosome 19 clone CTC-250I14, complete sequence Length = 115932 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 10656 ccctgccctgccctgcccag 10637
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggcctcgcctttccctctcc 272 |||||||||||||||||||| Sbjct: 1800296 ggcctcgcctttccctctcc 1800277
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 13596578 ccctgccctgccctgcccag 13596559
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 20608098 ccctgccctgccctgcccag 20608117 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 20361511 ccctgccctgccctgcccag 20361492 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 14853955 ccctgccctgccctgcccag 14853974 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 cctcccctgccctgccctgc 103 |||||||||||||||||||| Sbjct: 611348 cctcccctgccctgccctgc 611329
>gb|AC096727.3| Homo sapiens BAC clone RP11-35D5 from 4, complete sequence Length = 157078 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 acctcccctgccctgccctgccca 106 |||| ||||||||||||||||||| Sbjct: 136082 acctgccctgccctgccctgccca 136105
>gb|AC020978.10| Homo sapiens chromosome 16 clone RP11-96D1, complete sequence Length = 164293 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ctgccctgccctgcccagtc 109 |||||||||||||||||||| Sbjct: 93465 ctgccctgccctgcccagtc 93446
>gb|AC139530.3| Homo sapiens chromosome 17, clone RP13-1032I1, complete sequence Length = 159125 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 33502 ccctgccctgccctgcccag 33483
>dbj|AP004614.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0042P21 Length = 141230 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 17626 ccctgccctgccctgcccag 17607
>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0024F24 Length = 172642 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 70074 ccctgccctgccctgcccag 70093
>dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0026J14 Length = 163496 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 127544 ccctgccctgccctgcccag 127525
>dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1156H12 Length = 159509 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 131920 ccctgccctgccctgcccag 131939
>gb|AC012318.7|AC012318 Homo sapiens chromosome 19 clone LLNLF-143B12, complete sequence Length = 37084 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 cctcccctgccctgccctgcccag 107 ||||| |||||||||||||||||| Sbjct: 8670 cctcctctgccctgccctgcccag 8693
>emb|BX005008.12| Zebrafish DNA sequence from clone DKEY-29K15 in linkage group 14, complete sequence Length = 208014 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 tacctcccctgccctgccctgccc 105 ||||| |||||||||||||||||| Sbjct: 122957 tacctgccctgccctgccctgccc 122934
>gb|AF289667.1|AF289667 Mus musculus GTF2IRD1 and CYLN2 genes, complete cds Length = 201605 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 cccctgccctgccctgccca 106 |||||||||||||||||||| Sbjct: 85057 cccctgccctgccctgccca 85076
>gb|AC131971.9| Homo sapiens chromosome 11, clone CTC-343N3, complete sequence Length = 176226 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 91751 ccctgccctgccctgcccag 91732
>gb|AC093133.3| Papio anubis clone RP41-57F8, complete sequence Length = 177993 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cgggctcgcgcggcgccacc 387 |||||||||||||||||||| Sbjct: 91964 cgggctcgcgcggcgccacc 91983
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 tgctcgccgtgctgctgctc 332 |||||||||||||||||||| Sbjct: 8707645 tgctcgccgtgctgctgctc 8707626
>dbj|AP003856.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0697D09 Length = 158479 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 38781 ccctgccctgccctgcccag 38800
>dbj|AP003021.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503E05 Length = 168258 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 89999 ccctgccctgccctgcccag 90018
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 cctcccctgccctgccctgc 103 |||||||||||||||||||| Sbjct: 85953 cctcccctgccctgccctgc 85934
>dbj|AP006453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1339H09 Length = 131136 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 33994 ccctgccctgccctgcccag 33975
>dbj|BS000243.1| Pan troglodytes chromosome 22 clone:CH251-388O03, map 22, complete sequences Length = 182350 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tcccctgccctgccctgccc 105 |||||||||||||||||||| Sbjct: 92804 tcccctgccctgccctgccc 92823
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 133762 ccctgccctgccctgcccag 133781
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 88180 ccctgccctgccctgcccag 88199
>ref|NM_211761.1| Eremothecium gossypii AGR034Wp (AGR034W), mRNA Length = 480 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 tcgacggctccgcggcggag 470 |||||||||||||||||||| Sbjct: 431 tcgacggctccgcggcggag 450
>gb|AC134339.6| Mus musculus BAC clone RP23-5F21 from 8, complete sequence Length = 229073 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tcccctgccctgccctgccc 105 |||||||||||||||||||| Sbjct: 54892 tcccctgccctgccctgccc 54911
>emb|BX248418.16| Zebrafish DNA sequence from clone DKEY-181I3 in linkage group 20, complete sequence Length = 152757 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 cgctctcctaataattctctcttc 132 |||||| ||||||||||||||||| Sbjct: 37883 cgctctactaataattctctcttc 37860
>gb|AC154438.2| Mus musculus BAC clone RP23-178P20 from 16, complete sequence Length = 213575 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 56305 ccctgccctgccctgcccag 56324
>gb|AC117231.4| Mus musculus BAC clone RP23-394M5 from 8, complete sequence Length = 195936 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tcccctgccctgccctgccc 105 |||||||||||||||||||| Sbjct: 124300 tcccctgccctgccctgccc 124281
>gb|AC125468.5| Mus musculus BAC clone RP24-113D21 from 7, complete sequence Length = 197913 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 26287 ccctgccctgccctgcccag 26268
>emb|AL935186.22| Zebrafish DNA sequence from clone CH211-250M6 in linkage group 4, complete sequence Length = 166476 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 161604 ccctgccctgccctgcccag 161623 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 161158 ccctgccctgccctgcccag 161177 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 150045 ccctgccctgccctgcccag 150064 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 149599 ccctgccctgccctgcccag 149618
>gb|AC007136.1|AC007136 Homo sapiens chromosome 19, cosmid F20063, complete sequence Length = 42265 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 15608 ccctgccctgccctgcccag 15589
>gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76 of 83 of the complete sequence Length = 294272 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tcccctgccctgccctgccc 105 |||||||||||||||||||| Sbjct: 269899 tcccctgccctgccctgccc 269918
>dbj|AP001760.1| Homo sapiens genomic DNA, chromosome 21q, section 104/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tcccctgccctgccctgccc 105 |||||||||||||||||||| Sbjct: 53883 tcccctgccctgccctgccc 53902
>ref|NM_001001985.2| Mus musculus RIKEN cDNA 1110038O08 gene (1110038O08Rik), mRNA Length = 6527 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 6131 ccctgccctgccctgcccag 6150
>emb|AL773539.18| Mouse DNA sequence from clone RP23-9F18 on chromosome 4, complete sequence Length = 182206 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ctgccctgccctgcccagtc 109 |||||||||||||||||||| Sbjct: 108588 ctgccctgccctgcccagtc 108607
>gb|AC004556.1|AC004556 Homo sapiens Chromosome 11p15.5 PAC pDJ998n23 containing H19 gene, complete sequence Length = 100316 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 42491 ccctgccctgccctgcccag 42472 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 42456 ccctgccctgccctgcccag 42437
>gb|AC005544.1|AC005544 Homo sapiens chromosome 17, clone hRPK.349_A_8, complete sequence Length = 169045 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 94976 ccctgccctgccctgcccag 94995
>emb|AL806525.23| Mouse DNA sequence from clone RP23-254N4 on chromosome 4, complete sequence Length = 209356 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 23424 ccctgccctgccctgcccag 23443
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggcctcgcctttccctctcc 272 |||||||||||||||||||| Sbjct: 1800274 ggcctcgcctttccctctcc 1800255
>emb|AL139287.24| Human DNA sequence from clone RP5-890O3 on chromosome 1 Contains the AKIP gene for aurora-A kinase interacting protein, a novel gene (FLJ90811) a NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4 15kDa (NDUFB4) pseudogene, a novel gene (MGC3047), the DVL1 gene for dishevelled dsh homolog 1 (Drosophila), the TAS1R3 gene for taste receptor type 1 member 3, a novel gene (MGC10334), a novel gene (FLJ20542), a novel gene and five CpG islands, complete sequence Length = 84445 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 12517 ccctgccctgccctgcccag 12536
>emb|AL935150.10| Mouse DNA sequence from clone RP24-482A24 on chromosome 2, complete sequence Length = 163240 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 98062 ccctgccctgccctgcccag 98043
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ggcctcgcctttccctctcc 272 |||||||||||||||||||| Sbjct: 40186 ggcctcgcctttccctctcc 40205
>gb|AC135353.3| Mus musculus BAC clone RP24-401C17 from 9, complete sequence Length = 132290 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 17749 ccctgccctgccctgcccag 17768
>gb|AC140402.2| Mus musculus BAC clone RP24-90D2 from 10, complete sequence Length = 237935 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 70394 ccctgccctgccctgcccag 70413
>gb|AC123548.4| Mus musculus BAC clone RP23-441J16 from 6, complete sequence Length = 178488 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 148599 ccctgccctgccctgcccag 148580
>emb|CT025592.14| Mouse DNA sequence from clone RP23-431J17 on chromosome 16, complete sequence Length = 215987 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 11896 ccctgccctgccctgcccag 11877
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 gtgctcgccgtgctgctgct 331 |||||||||||||||||||| Sbjct: 1778770 gtgctcgccgtgctgctgct 1778789
>gb|AD000017.1|MSGY409 Mycobacterium tuberculosis sequence from clone y409 Length = 41321 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 tgatcgattcgtcggccggt 227 |||||||||||||||||||| Sbjct: 12767 tgatcgattcgtcggccggt 12748
>gb|AC167419.4| Mus musculus BAC clone RP24-359H20 from chromosome 5, complete sequence Length = 179790 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 cccctgccctgccctgccca 106 |||||||||||||||||||| Sbjct: 125862 cccctgccctgccctgccca 125881
>gb|U51280.1|HSU51280 Human chromosome 11 cosmid cSRL-183c2 containing Cys-tRNA synthetase (CARS) gene Length = 33233 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 26942 ccctgccctgccctgcccag 26923
>gb|AC160120.2| Mus musculus BAC clone RP23-407B7 from chromosome 14, complete sequence Length = 202981 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 61754 ccctgccctgccctgcccag 61735
>gb|AC161441.21| Mus musculus chromosome 7, clone RP24-158L15, complete sequence Length = 159403 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 35406 ccctgccctgccctgcccag 35425
>emb|AL645806.9| Mouse DNA sequence from clone CT7-316H20 on chromosome 3, complete sequence Length = 129775 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 77115 ccctgccctgccctgcccag 77096
>emb|AL627102.21| Mouse DNA sequence from clone RP23-291A3 on chromosome 3, complete sequence Length = 211349 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 210438 ccctgccctgccctgcccag 210419
>emb|AJ251154.1|MMU251154 Mus musculus olfactory receptor cluster, OR37A, OR37B, OR37C, OR37E genes and OR37D pseudogene Length = 76099 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ctgccctgccctgcccagtc 109 |||||||||||||||||||| Sbjct: 4892 ctgccctgccctgcccagtc 4873
>emb|AL589650.20| Mouse DNA sequence from clone RP23-81H23 on chromosome 15, complete sequence Length = 197660 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 62742 ccctgccctgccctgcccag 62761
>gb|AC102553.8| Mus musculus chromosome 19, clone RP23-159D6, complete sequence Length = 181534 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tcccctgccctgccctgccc 105 |||||||||||||||||||| Sbjct: 89823 tcccctgccctgccctgccc 89842
>gb|AC117665.6| Mus musculus chromosome 8, clone RP23-360I9, complete sequence Length = 217058 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 11602 ccctgccctgccctgcccag 11621
>gb|AC006534.10| Homo sapiens chromosome 17, clone RP11-557B23, complete sequence Length = 216789 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 160832 ccctgccctgccctgcccag 160813
>dbj|AP001477.1| Homo sapiens genomic DNA, chromosome 21q22.3, clone:f50C10, telomere region, complete sequence Length = 38399 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tcccctgccctgccctgccc 105 |||||||||||||||||||| Sbjct: 32722 tcccctgccctgccctgccc 32741
>emb|AL645759.11| Mouse DNA sequence from clone RP23-441I10 on chromosome 3, complete sequence Length = 118244 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccctgccctgccctgcccag 107 |||||||||||||||||||| Sbjct: 1089 ccctgccctgccctgcccag 1070
>emb|AL591366.15| Mouse DNA sequence from clone RP23-80N1 on chromosome 11, complete sequence Length = 117612 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 ctcccctgccctgccctgcc 104 |||||||||||||||||||| Sbjct: 99301 ctcccctgccctgccctgcc 99320 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,580,270 Number of Sequences: 3902068 Number of extensions: 3580270 Number of successful extensions: 88713 Number of sequences better than 10.0: 199 Number of HSP's better than 10.0 without gapping: 201 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 86433 Number of HSP's gapped (non-prelim): 2269 length of query: 568 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 545 effective length of database: 17,143,297,704 effective search space: 9343097248680 effective search space used: 9343097248680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
