ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart54d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK099894.1| Oryza sativa (japonica cultivar-group) cDNA clon... 480 e-132
2dbj|AK066034.1| Oryza sativa (japonica cultivar-group) cDNA clon... 472 e-130
3ref|NM_192167.1| Oryza sativa (japonica cultivar-group), predic... 389 e-105
4ref|XM_475848.1| Oryza sativa (japonica cultivar-group), predic... 278 2e-71
5dbj|AK061016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 4e-54
6gb|AY110197.1| Zea mays CL41614_1 mRNA sequence 178 1e-41
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
8dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
9gb|DQ429329.1| Sorghum propinquum locus pSB0772 genomic sequence 74 6e-10
10gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
11gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
12gb|DQ429328.1| Sorghum bicolor voucher PI585454 locus pSB0772 ge... 66 1e-07
13gb|DQ429314.1| Sorghum bicolor voucher NSL51030 locus pSB0772 ge... 66 1e-07
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
15gb|DQ429327.1| Sorghum bicolor voucher PI267539 locus pSB0772 ge... 58 3e-05
16gb|DQ429326.1| Sorghum bicolor voucher PI267408 locus pSB0772 ge... 58 3e-05
17gb|DQ429325.1| Sorghum bicolor voucher PI221607 locus pSB0772 ge... 58 3e-05
18gb|DQ429324.1| Sorghum bicolor voucher PI152702 locus pSB0772 ge... 58 3e-05
19gb|DQ429323.1| Sorghum bicolor voucher NSL92371 locus pSB0772 ge... 58 3e-05
20gb|DQ429322.1| Sorghum bicolor voucher NSL87902 locus pSB0772 ge... 58 3e-05
21gb|DQ429321.1| Sorghum bicolor voucher NSL87666 locus pSB0772 ge... 58 3e-05
22gb|DQ429320.1| Sorghum bicolor voucher NSL77217 locus pSB0772 ge... 58 3e-05
23gb|DQ429319.1| Sorghum bicolor voucher NSL77034 locus pSB0772 ge... 58 3e-05
24gb|DQ429318.1| Sorghum bicolor voucher NSL56174 locus pSB0772 ge... 58 3e-05
25gb|DQ429317.1| Sorghum bicolor voucher NSL56003 locus pSB0772 ge... 58 3e-05
26gb|DQ429316.1| Sorghum bicolor voucher NSL55243 locus pSB0772 ge... 58 3e-05
27gb|DQ429315.1| Sorghum bicolor voucher NSL51365 locus pSB0772 ge... 58 3e-05
28gb|DQ429313.1| Sorghum bicolor voucher NSL50875 locus pSB0772 ge... 58 3e-05
29gb|DQ429312.1| Sorghum bicolor voucher BTx623 locus pSB0772 geno... 58 3e-05
30ref|NM_101701.2| Arabidopsis thaliana aminoacyl-tRNA hydrolase A... 50 0.008
31dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
32gb|BT005284.1| Arabidopsis thaliana At1g18440 mRNA, complete cds 50 0.008
33dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
34dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
35dbj|AK119054.1| Arabidopsis thaliana At1g18440 mRNA for unknown ... 50 0.008
36gb|AC152123.1| Genomic sequence for broccoli [Brassica oleracea ... 50 0.008
37emb|BX813553.1|CNS0AAJW Arabidopsis thaliana Full-length cDNA Co... 44 0.52
38dbj|AK109215.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.52
39ref|XM_481898.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.1
40ref|XM_481897.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.1
41ref|XM_517517.1| PREDICTED: Pan troglodytes similar to Hypotheti... 42 2.1
42gb|AC163447.5| Mus musculus chromosome 7, clone RP24-314E16, com... 42 2.1
43gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, comp... 42 2.1
44emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 42 2.1
45gb|AE004290.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom... 42 2.1
46emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4,... 42 2.1
47gb|AC083841.9| Homo sapiens chromosome 8, clone RP11-706C16, com... 42 2.1
48dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
49dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
50gb|AC073385.14| Homo sapiens chromosome 8, clone RP11-304E16, co... 42 2.1
51dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
52dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 2.1
53dbj|AP004679.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
54dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
55dbj|AP005096.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
56dbj|AK119697.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
57dbj|AK106035.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
58dbj|AK102838.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
59gb|AC134542.3| Mus musculus BAC clone RP24-441E15 from 6, comple... 42 2.1
60ref|NM_190532.1| Oryza sativa (japonica cultivar-group), predic... 40 8.1
61gb|AC165307.6| Mus musculus chromosome 3, clone RP24-372I24, com... 40 8.1
62gb|AC132252.2| Mus musculus BAC clone RP24-450A24 from chromosom... 40 8.1
63gb|AC122447.4| Mus musculus BAC clone RP24-240O5 from chromosome... 40 8.1
64gb|AC098705.2| Mus musculus BAC clone RP23-1B19 from 3, complete... 40 8.1
65gb|AC101827.10| Mus musculus chromosome 15, clone RP24-426P14, c... 40 8.1
66gb|AC149065.4| Mus musculus BAC clone RP23-121I6 from chromosome... 40 8.1
67gb|AY043329.1| Streptomyces lividans ethidium bromide resistance... 40 8.1
68emb|CR450812.5| Zebrafish DNA sequence from clone CH211-161H7, c... 40 8.1
69ref|XM_795315.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 8.1
70emb|AL133378.16| Human DNA sequence from clone RP1-91B17 on chro... 40 8.1
71ref|XM_794779.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 8.1
72gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 8.1
73gb|AC163342.2| Mus musculus BAC clone RP24-115M13 from chromosom... 40 8.1
74emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete ... 40 8.1
75gb|AC111654.6| Rattus norvegicus Chr BAC CH230-108G17 (Children'... 40 8.1
76gb|AE011678.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 8.1
77gb|AC153651.4| Mus musculus BAC clone RP24-74B24 from chromosome... 40 8.1
78gb|AC151714.3| Mus musculus BAC clone RP23-437A9 from chromosome... 40 8.1
79gb|AC092614.2| Homo sapiens BAC clone RP11-192M8 from 2, complet... 40 8.1
80dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
81gb|AC134829.3| Mus musculus BAC clone RP24-491N21 from 6, comple... 40 8.1
82gb|AC132613.4| Mus musculus BAC clone RP23-285C21 from 6, comple... 40 8.1
83gb|AY450930.1| Chlamydomonas reinhardtii plus agglutinin (SAG1) ... 40 8.1
84gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 8.1
85gb|AC140409.3| Mus musculus BAC clone RP23-138K22 from 9, comple... 40 8.1
86emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chr... 40 8.1
87gb|AC161507.2| Mus musculus chromosome 5, clone RP23-76L18, comp... 40 8.1
88emb|AL627099.13| Mouse DNA sequence from clone RP23-306F22 on ch... 40 8.1
89gb|M11392.1|CHKH33A1 Chicken histone gene encoding replacement v... 40 8.1 
>dbj|AK099894.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113G18, full
           insert sequence
          Length = 1249

 Score =  480 bits (242), Expect = e-132
 Identities = 344/378 (91%)
 Strand = Plus / Plus

                                                                       
Query: 214 gacggcggcgcgcggaagccgtggctgttcgttgggctagggaaccccgggaagatgtac 273
           ||||||||||||| |||||||||| ||||||| ||||| ||||||||||||||  |||||
Sbjct: 198 gacggcggcgcgctgaagccgtggttgttcgtcgggctcgggaaccccgggaaagtgtac 257

                                                                       
Query: 274 cagaggactcgccacaacgttggattcgagatgattgatgctatagcagaagcagagggt 333
           ||  |||||||||||||||||||||||||||||||||||| |||||||||||| || |||
Sbjct: 258 caagggactcgccacaacgttggattcgagatgattgatgttatagcagaagctgaaggt 317

                                                                       
Query: 334 gtatcactcagcggtatgcagttcaaggcaatggttggcaaaggtcgtattggagatgtt 393
            |||| |||||| |||||||||||||||||||||| || |||||||||||||||||||  
Sbjct: 318 atatccctcagcagtatgcagttcaaggcaatggtaggaaaaggtcgtattggagatgcc 377

                                                                       
Query: 394 cctatcatgcttgccaagccgcaaacgtttatgaatgcaagcggtgagtctgttgggcag 453
           ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 378 cctatcatgctggccaagccacaaacttttatgaatgcaagtggtgagtctgtggggcag 437

                                                                       
Query: 454 ttggtttcatatttcaagataccacttaatcaagttgttgtgatgtacgatgatctggat 513
           ||||| |||||||||||||||||||||||||||||| |||||||||| |||||||| || 
Sbjct: 438 ttggtctcatatttcaagataccacttaatcaagttcttgtgatgtatgatgatctagac 497

                                                                       
Query: 514 ttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcgggcataatgggatg 573
           || ||||| || ||||||||||||||||| ||||||||||||||||| ||||||||| ||
Sbjct: 498 ttgccctttgcaaaattgcgtctactgccgaaaggtggacatggcggtcataatggggtg 557

                             
Query: 574 agaagcattatcaaccat 591
           ||||||||||||||||||
Sbjct: 558 agaagcattatcaaccat 575



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 68  cggcgatgcagctgctctccggcgcctcggcctcccg 104
           ||||||||| |||||||||||||||||| || |||||
Sbjct: 49  cggcgatgcggctgctctccggcgcctctgcttcccg 85
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>dbj|AK066034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047M19, full
           insert sequence
          Length = 1211

 Score =  472 bits (238), Expect = e-130
 Identities = 343/378 (90%)
 Strand = Plus / Plus

                                                                       
Query: 214 gacggcggcgcgcggaagccgtggctgttcgttgggctagggaaccccgggaagatgtac 273
           ||||||||||||| |||||||||| ||||||| ||||| ||||||||||||||  |||||
Sbjct: 222 gacggcggcgcgctgaagccgtggttgttcgtcgggctcgggaaccccgggaaagtgtac 281

                                                                       
Query: 274 cagaggactcgccacaacgttggattcgagatgattgatgctatagcagaagcagagggt 333
           ||  |||||| ||||||||||||||||||||||||||||| |||||||||||| || |||
Sbjct: 282 caagggactctccacaacgttggattcgagatgattgatgttatagcagaagctgaaggt 341

                                                                       
Query: 334 gtatcactcagcggtatgcagttcaaggcaatggttggcaaaggtcgtattggagatgtt 393
            |||| |||||| |||||||||||||||||||||| || |||||||||||||||||||  
Sbjct: 342 atatccctcagcagtatgcagttcaaggcaatggtaggaaaaggtcgtattggagatgcc 401

                                                                       
Query: 394 cctatcatgcttgccaagccgcaaacgtttatgaatgcaagcggtgagtctgttgggcag 453
           ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 402 cctatcatgctggccaagccacaaacttttatgaatgcaagtggtgagtctgtggggcag 461

                                                                       
Query: 454 ttggtttcatatttcaagataccacttaatcaagttgttgtgatgtacgatgatctggat 513
           ||||| |||||||||||||||||||||||||||||| |||||||||| |||||||| || 
Sbjct: 462 ttggtctcatatttcaagataccacttaatcaagttcttgtgatgtatgatgatctagac 521

                                                                       
Query: 514 ttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcgggcataatgggatg 573
           || ||||| || ||||||||||||||||| ||||||||||||||||| ||||||||| ||
Sbjct: 522 ttgccctttgcaaaattgcgtctactgccgaaaggtggacatggcggtcataatggggtg 581

                             
Query: 574 agaagcattatcaaccat 591
           ||||||||||||||||||
Sbjct: 582 agaagcattatcaaccat 599



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 68  cggcgatgcagctgctctccggcgcctcggcctcccg 104
           ||||||||| |||||||||||||||||| || |||||
Sbjct: 73  cggcgatgcggctgctctccggcgcctctgcttcccg 109
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>ref|NM_192167.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 801

 Score =  389 bits (196), Expect = e-105
 Identities = 274/300 (91%)
 Strand = Plus / Plus

                                                                       
Query: 292 gttggattcgagatgattgatgctatagcagaagcagagggtgtatcactcagcggtatg 351
           |||||||||||||||||||||| |||||||||||| || ||| |||| |||||| |||||
Sbjct: 271 gttggattcgagatgattgatgttatagcagaagctgaaggtatatccctcagcagtatg 330

                                                                       
Query: 352 cagttcaaggcaatggttggcaaaggtcgtattggagatgttcctatcatgcttgccaag 411
           ||||||||||||||||| || |||||||||||||||||||  ||||||||||| ||||||
Sbjct: 331 cagttcaaggcaatggtaggaaaaggtcgtattggagatgcccctatcatgctggccaag 390

                                                                       
Query: 412 ccgcaaacgtttatgaatgcaagcggtgagtctgttgggcagttggtttcatatttcaag 471
           || ||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||||||
Sbjct: 391 ccacaaacttttatgaatgcaagtggtgagtctgtggggcagttggtctcatatttcaag 450

                                                                       
Query: 472 ataccacttaatcaagttgttgtgatgtacgatgatctggatttacccttcgcgaaattg 531
           |||||||||||||||||| |||||||||| |||||||| || || ||||| || ||||||
Sbjct: 451 ataccacttaatcaagttcttgtgatgtatgatgatctagacttgccctttgcaaaattg 510

                                                                       
Query: 532 cgtctactgccaaaaggtggacatggcgggcataatgggatgagaagcattatcaaccat 591
           ||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 511 cgtctactgccgaaaggtggacatggcggtcataatggggtgagaagcattatcaaccat 570



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 70/78 (89%)
 Strand = Plus / Plus

                                                                       
Query: 214 gacggcggcgcgcggaagccgtggctgttcgttgggctagggaaccccgggaagatgtac 273
           ||||||||||||| |||||||||| ||||||| ||||| ||||||||||||||  |||||
Sbjct: 145 gacggcggcgcgctgaagccgtggttgttcgtcgggctcgggaaccccgggaaagtgtac 204

                             
Query: 274 cagaggactcgccacaac 291
           ||  ||||||||||||||
Sbjct: 205 caagggactcgccacaac 222



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 73  atgcagctgctctccggcgcctcggcctcccg 104
           |||| |||||||||||||||||| || |||||
Sbjct: 1   atgcggctgctctccggcgcctctgcttcccg 32
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>ref|XM_475848.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 708

 Score =  278 bits (140), Expect = 2e-71
 Identities = 308/364 (84%)
 Strand = Plus / Plus

                                                                       
Query: 228 gaagccgtggctgttcgttgggctagggaaccccgggaagatgtaccagaggactcgcca 287
           ||||||||||||| || | ||||| ||||||||||| | ||||||| || ||||||| ||
Sbjct: 114 gaagccgtggctgctcatcgggctcgggaaccccggcaggatgtacaaggggactcgtca 173

                                                                       
Query: 288 caacgttggattcgagatgattgatgctatagcagaagcagagggtgtatcactcagcgg 347
           |||||||||||| |||||||| |||||||| |||||||| |||||| | ||  | ||| |
Sbjct: 174 caacgttggatttgagatgatcgatgctattgcagaagctgagggtatttctgttagcag 233

                                                                       
Query: 348 tatgcagttcaaggcaatggttggcaaaggtcgtattggagatgttcctatcatgcttgc 407
            | ||| |||||| |||||||||| ||||| | |||||| ||||| ||  | ||||||||
Sbjct: 234 caagcaattcaagtcaatggttggtaaaggccttattggtgatgtcccagtaatgcttgc 293

                                                                       
Query: 408 caagccgcaaacgtttatgaatgcaagcggtgagtctgttgggcagttggtttcatattt 467
           |||||| || || |  ||||||||||| |||||||||||||  ||| |||||||||||||
Sbjct: 294 caagccacagacttacatgaatgcaagtggtgagtctgttgcacagctggtttcatattt 353

                                                                       
Query: 468 caagataccacttaatcaagttgttgtgatgtacgatgatctggatttacccttcgcgaa 527
            ||||||||||| | ||||||| ||||||| || |||||||| ||  ||||||| || ||
Sbjct: 354 taagataccactcagtcaagttcttgtgatctatgatgatctagacataccctttgcaaa 413

                                                                       
Query: 528 attgcgtctactgccaaaaggtggacatggcgggcataatgggatgagaagcattatcaa 587
           ||||||  ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 414 attgcgcttactgcctaaaggaggacatggcgggcataatgggatgagaagcattattaa 473

               
Query: 588 ccat 591
           ||||
Sbjct: 474 ccat 477
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>dbj|AK061016.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-B10, full
           insert sequence
          Length = 1074

 Score =  220 bits (111), Expect = 4e-54
 Identities = 300/364 (82%), Gaps = 8/364 (2%)
 Strand = Plus / Plus

                                                                       
Query: 228 gaagccgtggctgttcgttgggctagggaaccccgggaagatgtaccagaggactcgcca 287
           ||||||||||||| || | ||||| ||||||||||| | ||||||| || ||||||| ||
Sbjct: 210 gaagccgtggctgctcatcgggctcgggaaccccggcaggatgtacaaggggactcgtca 269

                                                                       
Query: 288 caacgttggattcgagatgattgatgctatagcagaagcagagggtgtatcactcagcgg 347
           |||||||||||| |||||||| |||||||| |||||||| |||||| | ||  | ||| |
Sbjct: 270 caacgttggatttgagatgatcgatgctattgcagaagctgagggtatttctgttagcag 329

                                                                       
Query: 348 tatgcagttcaaggcaatggttggcaaaggtcgtattggagatgttcctatcatgcttgc 407
            | ||| |||||| |||||||||| ||||| | |||||| ||||| ||  | ||||||||
Sbjct: 330 caagcaattcaagtcaatggttggtaaaggccttattggtgatgtcccagtaatgcttgc 389

                                                                       
Query: 408 caagccgcaaacgtttatgaatgcaagcggtgagtctgttgggcagttggtttcatattt 467
           |||||| || || |  ||||||||||| |||        ||  ||| |||||||||||||
Sbjct: 390 caagccacagacttacatgaatgcaagtggt--------tgcacagctggtttcatattt 441

                                                                       
Query: 468 caagataccacttaatcaagttgttgtgatgtacgatgatctggatttacccttcgcgaa 527
            ||||||||||| | ||||||| ||||||| || |||||||| ||  ||||||| || ||
Sbjct: 442 taagataccactcagtcaagttcttgtgatctatgatgatctagacataccctttgcaaa 501

                                                                       
Query: 528 attgcgtctactgccaaaaggtggacatggcgggcataatgggatgagaagcattatcaa 587
           ||||||  ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 502 attgcgcttactgcctaaaggaggacatggcgggcataatgggatgagaagcattattaa 561

               
Query: 588 ccat 591
           ||||
Sbjct: 562 ccat 565
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>gb|AY110197.1| Zea mays CL41614_1 mRNA sequence
          Length = 531

 Score =  178 bits (90), Expect = 1e-41
 Identities = 125/137 (91%)
 Strand = Plus / Minus

                                                                       
Query: 455 tggtttcatatttcaagataccacttaatcaagttgttgtgatgtacgatgatctggatt 514
           ||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||
Sbjct: 531 tggtttcatatttcaagataccacttantcaagtcgttgtgatgtatgatgatctggatt 472

                                                                       
Query: 515 tacccttcgcgaaattgcgtctactgccaaaaggtggacatggcgggcataatgggatga 574
           ||||||| || ||| ||||||| |||||||| ||||| ||||| ||||||||||||||||
Sbjct: 471 taccctttgcaaaactgcgtctgctgccaaagggtggccatggtgggcataatgggatga 412

                            
Query: 575 gaagcattatcaaccat 591
           |||||||  ||||||||
Sbjct: 411 gaagcatcgtcaaccat 395
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  109 bits (55), Expect = 1e-20
 Identities = 79/87 (90%)
 Strand = Plus / Minus

                                                                            
Query: 292      gttggattcgagatgattgatgctatagcagaagcagagggtgtatcactcagcggtatg 351
                |||||||||||||||||||||| |||||||||||| || ||| |||| |||||| |||||
Sbjct: 28652972 gttggattcgagatgattgatgttatagcagaagctgaaggtatatccctcagcagtatg 28652913

                                           
Query: 352      cagttcaaggcaatggttggcaaaggt 378
                ||||||||||||||||| || ||||||
Sbjct: 28652912 cagttcaaggcaatggtaggaaaaggt 28652886



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 72/80 (90%)
 Strand = Plus / Minus

                                                                            
Query: 214      gacggcggcgcgcggaagccgtggctgttcgttgggctagggaaccccgggaagatgtac 273
                ||||||||||||| |||||||||| ||||||| ||||| ||||||||||||||  |||||
Sbjct: 28653536 gacggcggcgcgctgaagccgtggttgttcgtcgggctcgggaaccccgggaaagtgtac 28653477

                                    
Query: 274      cagaggactcgccacaacgt 293
                ||  ||||||||||||||||
Sbjct: 28653476 caagggactcgccacaacgt 28653457



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 66/72 (91%)
 Strand = Plus / Minus

                                                                            
Query: 375      aggtcgtattggagatgttcctatcatgcttgccaagccgcaaacgtttatgaatgcaag 434
                |||||||||||||||||  ||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 28652607 aggtcgtattggagatgcccctatcatgctggccaagccacaaacttttatgaatgcaag 28652548

                            
Query: 435      cggtgagtctgt 446
                 |||||||||||
Sbjct: 28652547 tggtgagtctgt 28652536



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                            
Query: 495      gatgtacgatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggaca 554
                |||||| |||||||| || || ||||| || ||||||||||||||||| |||||||||||
Sbjct: 28652312 gatgtatgatgatctagacttgccctttgcaaaattgcgtctactgccgaaaggtggaca 28652253

                                
Query: 555      tggcgggcataatggg 570
                |||||| |||||||||
Sbjct: 28652252 tggcggtcataatggg 28652237



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                                
Query: 448      gggcagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
                ||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 28652447 gggcagttggtctcatatttcaagataccacttaatcaagttcttgtg 28652400



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 68       cggcgatgcagctgctctccggcgcctcggcctcccg 104
                ||||||||| |||||||||||||||||| || |||||
Sbjct: 28653685 cggcgatgcggctgctctccggcgcctctgcttcccg 28653649



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 90       cgcctcggcctcccgctccccctcgcccc 118
                |||||| ||||||| ||||||||||||||
Sbjct: 35931561 cgcctccgcctccccctccccctcgcccc 35931589



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 90       cgcctcggcctcccgctccccctcgcccc 118
                |||||| ||||||| ||||||||||||||
Sbjct: 35931469 cgcctccgcctccccctccccctcgcccc 35931497



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 54       gccggcgacagcggcggcga 73
                ||||||||||||||||||||
Sbjct: 36052729 gccggcgacagcggcggcga 36052748



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 572      tgagaagcattatcaaccat 591
                ||||||||||||||||||||
Sbjct: 28651731 tgagaagcattatcaaccat 28651712
to top
>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431H09
          Length = 166886

 Score =  109 bits (55), Expect = 1e-20
 Identities = 79/87 (90%)
 Strand = Plus / Minus

                                                                         
Query: 292   gttggattcgagatgattgatgctatagcagaagcagagggtgtatcactcagcggtatg 351
             |||||||||||||||||||||| |||||||||||| || ||| |||| |||||| |||||
Sbjct: 36046 gttggattcgagatgattgatgttatagcagaagctgaaggtatatccctcagcagtatg 35987

                                        
Query: 352   cagttcaaggcaatggttggcaaaggt 378
             ||||||||||||||||| || ||||||
Sbjct: 35986 cagttcaaggcaatggtaggaaaaggt 35960



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 72/80 (90%)
 Strand = Plus / Minus

                                                                         
Query: 214   gacggcggcgcgcggaagccgtggctgttcgttgggctagggaaccccgggaagatgtac 273
             ||||||||||||| |||||||||| ||||||| ||||| ||||||||||||||  |||||
Sbjct: 36610 gacggcggcgcgctgaagccgtggttgttcgtcgggctcgggaaccccgggaaagtgtac 36551

                                 
Query: 274   cagaggactcgccacaacgt 293
             ||  ||||||||||||||||
Sbjct: 36550 caagggactcgccacaacgt 36531



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 66/72 (91%)
 Strand = Plus / Minus

                                                                         
Query: 375   aggtcgtattggagatgttcctatcatgcttgccaagccgcaaacgtttatgaatgcaag 434
             |||||||||||||||||  ||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 35681 aggtcgtattggagatgcccctatcatgctggccaagccacaaacttttatgaatgcaag 35622

                         
Query: 435   cggtgagtctgt 446
              |||||||||||
Sbjct: 35621 tggtgagtctgt 35610



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                         
Query: 495   gatgtacgatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggaca 554
             |||||| |||||||| || || ||||| || ||||||||||||||||| |||||||||||
Sbjct: 35386 gatgtatgatgatctagacttgccctttgcaaaattgcgtctactgccgaaaggtggaca 35327

                             
Query: 555   tggcgggcataatggg 570
             |||||| |||||||||
Sbjct: 35326 tggcggtcataatggg 35311



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                             
Query: 448   gggcagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
             ||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 35521 gggcagttggtctcatatttcaagataccacttaatcaagttcttgtg 35474



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 68    cggcgatgcagctgctctccggcgcctcggcctcccg 104
             ||||||||| |||||||||||||||||| || |||||
Sbjct: 36759 cggcgatgcggctgctctccggcgcctctgcttcccg 36723



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 572   tgagaagcattatcaaccat 591
             ||||||||||||||||||||
Sbjct: 34805 tgagaagcattatcaaccat 34786
to top
>gb|DQ429329.1| Sorghum propinquum locus pSB0772 genomic sequence
          Length = 681

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 502 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
           |||||||| ||| ||||||| |||||||||||||| |||||||| || |||||||| |||
Sbjct: 188 gatgatcttgatctaccctttgcgaaattgcgtctgctgccaaaggggggacatggtggg 247

                    
Query: 562 cataatggg 570
           || ||||||
Sbjct: 248 cacaatggg 256



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 455 tggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 64  tggtttcatacttcaagataccactcaatcaattagttgtg 104
to top
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05,
             complete sequence
          Length = 141715

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                         
Query: 502   gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
             |||||||| ||  ||||||| || ||||||||  ||||||| ||||| ||||||||||||
Sbjct: 74844 gatgatctagacataccctttgcaaaattgcgcttactgcctaaaggaggacatggcggg 74903

                      
Query: 562   cataatggg 570
             |||||||||
Sbjct: 74904 cataatggg 74912



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                         
Query: 228   gaagccgtggctgttcgttgggctagggaaccccgggaagatgtaccagaggactcgcca 287
             ||||||||||||| || | ||||| ||||||||||| | ||||||| || ||||||| ||
Sbjct: 73551 gaagccgtggctgctcatcgggctcgggaaccccggcaggatgtacaaggggactcgtca 73610

                   
Query: 288   caacgt 293
             ||||||
Sbjct: 73611 caacgt 73616



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 455   tggtttcatatttcaagataccacttaatcaagttgttgtg 495
             ||||||||||||| ||||||||||| | ||||||| |||||
Sbjct: 74720 tggtttcatattttaagataccactcagtcaagttcttgtg 74760



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 400   atgcttgccaagccgcaaacgtttatgaatgcaagcggtgagtctgt 446
             |||||||||||||| || || |  ||||||||||| |||||||||||
Sbjct: 74582 atgcttgccaagccacagacttacatgaatgcaagtggtgagtctgt 74628
to top
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08,
             complete sequence
          Length = 166218

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                         
Query: 502   gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
             |||||||| ||  ||||||| || ||||||||  ||||||| ||||| ||||||||||||
Sbjct: 99346 gatgatctagacataccctttgcaaaattgcgcttactgcctaaaggaggacatggcggg 99405

                      
Query: 562   cataatggg 570
             |||||||||
Sbjct: 99406 cataatggg 99414



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                         
Query: 228   gaagccgtggctgttcgttgggctagggaaccccgggaagatgtaccagaggactcgcca 287
             ||||||||||||| || | ||||| ||||||||||| | ||||||| || ||||||| ||
Sbjct: 98053 gaagccgtggctgctcatcgggctcgggaaccccggcaggatgtacaaggggactcgtca 98112

                   
Query: 288   caacgt 293
             ||||||
Sbjct: 98113 caacgt 98118



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 455   tggtttcatatttcaagataccacttaatcaagttgttgtg 495
             ||||||||||||| ||||||||||| | ||||||| |||||
Sbjct: 99222 tggtttcatattttaagataccactcagtcaagttcttgtg 99262



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 400   atgcttgccaagccgcaaacgtttatgaatgcaagcggtgagtctgt 446
             |||||||||||||| || || |  ||||||||||| |||||||||||
Sbjct: 99084 atgcttgccaagccacagacttacatgaatgcaagtggtgagtctgt 99130
to top
>gb|DQ429328.1| Sorghum bicolor voucher PI585454 locus pSB0772 genomic sequence
          Length = 682

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 502 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
           |||||||| ||| ||||||| |||||||||||||| |||||||| || |||||||| || 
Sbjct: 188 gatgatcttgatctaccctttgcgaaattgcgtctgctgccaaaggggggacatggtgga 247

                    
Query: 562 cataatggg 570
           || ||||||
Sbjct: 248 cacaatggg 256



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 451 cagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 60  cagttggtttcatacttcaagataccactcaatcaattagttgtg 104
to top
>gb|DQ429314.1| Sorghum bicolor voucher NSL51030 locus pSB0772 genomic sequence
          Length = 682

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 502 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
           |||||||| ||| ||||||| |||||||||||||| |||||||| || |||||||| || 
Sbjct: 188 gatgatcttgatctaccctttgcgaaattgcgtctgctgccaaaggggggacatggtgga 247

                    
Query: 562 cataatggg 570
           || ||||||
Sbjct: 248 cacaatggg 256



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 451 cagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 60  cagttggtttcatacttcaagataccactcaatcaattagttgtg 104
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                            
Query: 502      gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
                |||||||| ||  ||||||| || ||||||||  ||||||| ||||| ||||||||||||
Sbjct: 27068262 gatgatctagacataccctttgcaaaattgcgcttactgcctaaaggaggacatggcggg 27068321

                         
Query: 562      cataatggg 570
                |||||||||
Sbjct: 27068322 cataatggg 27068330



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                            
Query: 228      gaagccgtggctgttcgttgggctagggaaccccgggaagatgtaccagaggactcgcca 287
                ||||||||||||| || | ||||| ||||||||||| | ||||||| || ||||||| ||
Sbjct: 27066969 gaagccgtggctgctcatcgggctcgggaaccccggcaggatgtacaaggggactcgtca 27067028

                      
Query: 288      caacgt 293
                ||||||
Sbjct: 27067029 caacgt 27067034



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 455      tggtttcatatttcaagataccacttaatcaagttgttgtg 495
                ||||||||||||| ||||||||||| | ||||||| |||||
Sbjct: 27068138 tggtttcatattttaagataccactcagtcaagttcttgtg 27068178



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 400      atgcttgccaagccgcaaacgtttatgaatgcaagcggtgagtctgt 446
                |||||||||||||| || || |  ||||||||||| |||||||||||
Sbjct: 27068000 atgcttgccaagccacagacttacatgaatgcaagtggtgagtctgt 27068046
to top
>gb|DQ429327.1| Sorghum bicolor voucher PI267539 locus pSB0772 genomic sequence
          Length = 690

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 502 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
           |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || 
Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255

                    
Query: 562 cataatggg 570
           || ||||||
Sbjct: 256 cacaatggg 264



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 451 cagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 68  cagttggtttcatacttcaagataccactcaatcaattagttgtg 112
to top
>gb|DQ429326.1| Sorghum bicolor voucher PI267408 locus pSB0772 genomic sequence
          Length = 690

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 502 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
           |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || 
Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255

                    
Query: 562 cataatggg 570
           || ||||||
Sbjct: 256 cacaatggg 264



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 451 cagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 68  cagttggtttcatacttcaagataccactcaatcaattagttgtg 112
to top
>gb|DQ429325.1| Sorghum bicolor voucher PI221607 locus pSB0772 genomic sequence
          Length = 690

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 502 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
           |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || 
Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255

                    
Query: 562 cataatggg 570
           || ||||||
Sbjct: 256 cacaatggg 264



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 451 cagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 68  cagttggtttcatacttcaagataccactcaatcaattagttgtg 112
to top
>gb|DQ429324.1| Sorghum bicolor voucher PI152702 locus pSB0772 genomic sequence
          Length = 690

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 502 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
           |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || 
Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255

                    
Query: 562 cataatggg 570
           || ||||||
Sbjct: 256 cacaatggg 264



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 451 cagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 68  cagttggtttcatacttcaagataccactcaatcaattagttgtg 112
to top
>gb|DQ429323.1| Sorghum bicolor voucher NSL92371 locus pSB0772 genomic sequence
          Length = 690

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 502 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
           |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || 
Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255

                    
Query: 562 cataatggg 570
           || ||||||
Sbjct: 256 cacaatggg 264



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 451 cagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 68  cagttggtttcatacttcaagataccactcaatcaattagttgtg 112
to top
>gb|DQ429322.1| Sorghum bicolor voucher NSL87902 locus pSB0772 genomic sequence
          Length = 690

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 502 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
           |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || 
Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255

                    
Query: 562 cataatggg 570
           || ||||||
Sbjct: 256 cacaatggg 264



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 451 cagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 68  cagttggtttcatacttcaagataccactcaatcaattagttgtg 112
to top
>gb|DQ429321.1| Sorghum bicolor voucher NSL87666 locus pSB0772 genomic sequence
          Length = 690

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 502 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
           |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || 
Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255

                    
Query: 562 cataatggg 570
           || ||||||
Sbjct: 256 cacaatggg 264



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 451 cagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 68  cagttggtttcatacttcaagataccactcaatcaattagttgtg 112
to top
>gb|DQ429320.1| Sorghum bicolor voucher NSL77217 locus pSB0772 genomic sequence
          Length = 690

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 502 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
           |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || 
Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255

                    
Query: 562 cataatggg 570
           || ||||||
Sbjct: 256 cacaatggg 264



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 451 cagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 68  cagttggtttcatacttcaagataccactcaatcaattagttgtg 112
to top
>gb|DQ429319.1| Sorghum bicolor voucher NSL77034 locus pSB0772 genomic sequence
          Length = 690

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 502 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
           |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || 
Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255

                    
Query: 562 cataatggg 570
           || ||||||
Sbjct: 256 cacaatggg 264



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 451 cagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 68  cagttggtttcatacttcaagataccactcaatcaattagttgtg 112
to top
>gb|DQ429318.1| Sorghum bicolor voucher NSL56174 locus pSB0772 genomic sequence
          Length = 690

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 502 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
           |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || 
Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255

                    
Query: 562 cataatggg 570
           || ||||||
Sbjct: 256 cacaatggg 264



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 451 cagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 68  cagttggtttcatacttcaagataccactcaatcaattagttgtg 112
to top
>gb|DQ429317.1| Sorghum bicolor voucher NSL56003 locus pSB0772 genomic sequence
          Length = 690

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 502 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
           |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || 
Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255

                    
Query: 562 cataatggg 570
           || ||||||
Sbjct: 256 cacaatggg 264



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 451 cagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 68  cagttggtttcatacttcaagataccactcaatcaattagttgtg 112
to top
>gb|DQ429316.1| Sorghum bicolor voucher NSL55243 locus pSB0772 genomic sequence
          Length = 690

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 502 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
           |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || 
Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255

                    
Query: 562 cataatggg 570
           || ||||||
Sbjct: 256 cacaatggg 264



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 451 cagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 68  cagttggtttcatacttcaagataccactcaatcaattagttgtg 112
to top
>gb|DQ429315.1| Sorghum bicolor voucher NSL51365 locus pSB0772 genomic sequence
          Length = 690

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 502 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
           |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || 
Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255

                    
Query: 562 cataatggg 570
           || ||||||
Sbjct: 256 cacaatggg 264



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 451 cagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 68  cagttggtttcatacttcaagataccactcaatcaattagttgtg 112
to top
>gb|DQ429313.1| Sorghum bicolor voucher NSL50875 locus pSB0772 genomic sequence
          Length = 690

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 502 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
           |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || 
Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255

                    
Query: 562 cataatggg 570
           || ||||||
Sbjct: 256 cacaatggg 264



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 451 cagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 68  cagttggtttcatacttcaagataccactcaatcaattagttgtg 112
to top
>gb|DQ429312.1| Sorghum bicolor voucher BTx623 locus pSB0772 genomic sequence
          Length = 690

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 502 gatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacatggcggg 561
           |||||||| ||| ||||||| |||||||||||||| || ||||| || |||||||| || 
Sbjct: 196 gatgatcttgatctaccctttgcgaaattgcgtctgctaccaaaggggggacatggtgga 255

                    
Query: 562 cataatggg 570
           || ||||||
Sbjct: 256 cacaatggg 264



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 451 cagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 68  cagttggtttcatacttcaagataccactcaatcaattagttgtg 112
to top
>ref|NM_101701.2| Arabidopsis thaliana aminoacyl-tRNA hydrolase AT1G18440 mRNA,
           complete cds
          Length = 1109

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 118/149 (79%)
 Strand = Plus / Plus

                                                                       
Query: 436 ggtgagtctgttgggcagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| ||  | ||||||| || |||||| ||  | || |||||  |||||
Sbjct: 502 ggtgagtctgttggacaaatcgtttcattttacaagatcccgttaaagcaagtacttgtg 561

                                                                       
Query: 496 atgtacgatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacat 555
            | ||||||||| | ||||| ||||| |  ||| | ||| || ||||||||||||| || 
Sbjct: 562 gtttacgatgatttagatttgccctttggtaaactacgtttattgccaaaaggtggtcac 621

                                        
Query: 556 ggcgggcataatgggatgagaagcattat 584
           || || || |||||||||||||| |||||
Sbjct: 622 ggaggccacaatgggatgagaagtattat 650



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 259 cccgggaagatgtaccagaggactcgccacaacgttggattcgagatg 306
           ||||| |||| ||||||| | || |||||||||||||| || ||||||
Sbjct: 325 cccggcaagaagtaccagggcacgcgccacaacgttggttttgagatg 372
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 455      tggtttcatatttcaagataccacttaatcaagttgttgtg 495
                ||||||||||||| ||||||||||| | ||||||| |||||
Sbjct: 15891819 tggtttcatattttaagataccactcagtcaagttcttgtg 15891779



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 455      tggtttcatatttcaagataccact 479
                ||||||||||||| |||||||||||
Sbjct: 21530018 tggtttcatattttaagataccact 21530042



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 455      tggtttcatatttcaagataccact 479
                ||||||||||||| |||||||||||
Sbjct: 13743786 tggtttcatattttaagataccact 13743762
to top
>gb|BT005284.1| Arabidopsis thaliana At1g18440 mRNA, complete cds
          Length = 867

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 118/149 (79%)
 Strand = Plus / Plus

                                                                       
Query: 436 ggtgagtctgttgggcagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| ||  | ||||||| || |||||| ||  | || |||||  |||||
Sbjct: 484 ggtgagtctgttggacaaatcgtttcattttacaagatcccgttaaagcaagtacttgtg 543

                                                                       
Query: 496 atgtacgatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacat 555
            | ||||||||| | ||||| ||||| |  ||| | ||| || ||||||||||||| || 
Sbjct: 544 gtttacgatgatttagatttgccctttggtaaactacgtttattgccaaaaggtggtcac 603

                                        
Query: 556 ggcgggcataatgggatgagaagcattat 584
           || || || |||||||||||||| |||||
Sbjct: 604 ggaggccacaatgggatgagaagtattat 632



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 259 cccgggaagatgtaccagaggactcgccacaacgttggattcgagatg 306
           ||||| |||| ||||||| | || |||||||||||||| || ||||||
Sbjct: 307 cccggcaagaagtaccagggcacgcgccacaacgttggttttgagatg 354
to top
>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0031P18
          Length = 156535

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 455   tggtttcatatttcaagataccacttaatcaagttgttgtg 495
             ||||||||||||| ||||||||||| | ||||||| |||||
Sbjct: 25268 tggtttcatattttaagataccactcagtcaagttcttgtg 25228
to top
>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0026P23
          Length = 180188

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                       
Query: 455    tggtttcatatttcaagataccacttaatcaagttgttgtg 495
              ||||||||||||| ||||||||||| | ||||||| |||||
Sbjct: 104822 tggtttcatattttaagataccactcagtcaagttcttgtg 104782
to top
>dbj|AK119054.1| Arabidopsis thaliana At1g18440 mRNA for unknown protein, complete
           cds, clone: RAFL21-39-I07
          Length = 1109

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 118/149 (79%)
 Strand = Plus / Plus

                                                                       
Query: 436 ggtgagtctgttgggcagttggtttcatatttcaagataccacttaatcaagttgttgtg 495
           |||||||||||||| ||  | ||||||| || |||||| ||  | || |||||  |||||
Sbjct: 502 ggtgagtctgttggacaaatcgtttcattttacaagatcccgttaaagcaagtacttgtg 561

                                                                       
Query: 496 atgtacgatgatctggatttacccttcgcgaaattgcgtctactgccaaaaggtggacat 555
            | ||||||||| | ||||| ||||| |  ||| | ||| || ||||||||||||| || 
Sbjct: 562 gtttacgatgatttagatttgccctttggtaaactacgtttattgccaaaaggtggtcac 621

                                        
Query: 556 ggcgggcataatgggatgagaagcattat 584
           || || || |||||||||||||| |||||
Sbjct: 622 ggaggccacaatgggatgagaagtattat 650



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 259 cccgggaagatgtaccagaggactcgccacaacgttggattcgagatg 306
           ||||| |||| ||||||| | || |||||||||||||| || ||||||
Sbjct: 325 cccggcaagaagtaccagggcacgcgccacaacgttggttttgagatg 372
to top
>gb|AC152123.1| Genomic sequence for broccoli [Brassica oleracea L. (Italica group)]
             BAC clone B21F5, complete sequence
          Length = 82329

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 530   tgcgtctactgccaaaaggtggacatggcgggcataatggg 570
             ||||| |||||||||||||||| ||||| ||||| ||||||
Sbjct: 39196 tgcgtttactgccaaaaggtggccatggggggcacaatggg 39236
to top
>emb|BX813553.1|CNS0AAJW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB24ZA09 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1387

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                          
Query: 539  tgccaaaaggtggacatggcgggcataatgggatgagaagcattat 584
            ||||||||||||| || || || || |||||||||||||| |||||
Sbjct: 971  tgccaaaaggtggtcacggaggccacaatgggatgagaagtattat 1016



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 259 cccgggaagatgtaccagaggactcgccacaacgttggattcgagatg 306
           ||||| |||| ||||||| | || |||||||||||||| || ||||||
Sbjct: 357 cccggcaagaagtaccagggcacgcgccacaacgttggttttgagatg 404
to top
>dbj|AK109215.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-D09, full
           insert sequence
          Length = 656

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 47  tggtggtgccggcgacagcggcggcg 72
           |||||||| |||||||||||||||||
Sbjct: 296 tggtggtggcggcgacagcggcggcg 271
to top
>ref|XM_481898.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 747

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 455 tggtttcatatttcaagataccact 479
           ||||||||||||| |||||||||||
Sbjct: 543 tggtttcatatttaaagataccact 567
to top
>ref|XM_481897.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1002

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 455 tggtttcatatttcaagataccact 479
           ||||||||||||| |||||||||||
Sbjct: 466 tggtttcatatttaaagataccact 490
to top
>ref|XM_517517.1| PREDICTED: Pan troglodytes similar to Hypothetical protein FLJ11184
           (LOC461584), mRNA
          Length = 967

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 235 tggctgttcgttgggctaggg 255
           |||||||||||||||||||||
Sbjct: 4   tggctgttcgttgggctaggg 24
to top
>gb|AC163447.5| Mus musculus chromosome 7, clone RP24-314E16, complete sequence
          Length = 135851

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 35     ctggtgcccaattggtggtgc 55
              |||||||||||||||||||||
Sbjct: 128196 ctggtgcccaattggtggtgc 128216
to top
>gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, complete sequence
          Length = 171861

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    ctggtgcccaattggtggtgc 55
             |||||||||||||||||||||
Sbjct: 45734 ctggtgcccaattggtggtgc 45754
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 51     ggtgccggcgacagcggcggcgatg 75
              |||| ||||||||||||||||||||
Sbjct: 621721 ggtggcggcgacagcggcggcgatg 621745
to top
>gb|AE004290.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section
           198 of 251 of the complete chromosome
          Length = 10581

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 550 ggacatggcgggcataatggg 570
           |||||||||||||||||||||
Sbjct: 448 ggacatggcgggcataatggg 468
to top
>emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088K19,
             complete sequence
          Length = 156002

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 90    cgcctcggcctcccgctccccctcgcccc 118
             |||||| ||||||| ||||||||||||||
Sbjct: 26045 cgcctccgcctccccctccccctcgcccc 26073



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 90    cgcctcggcctcccgctccccctcgccc 117
             |||||| ||||||| |||||||||||||
Sbjct: 26203 cgcctccgcctccccctccccctcgccc 26230
to top
>gb|AC083841.9| Homo sapiens chromosome 8, clone RP11-706C16, complete sequence
          Length = 203375

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 183   ggcagcctcctcgtcagctgc 203
             |||||||||||||||||||||
Sbjct: 52897 ggcagcctcctcgtcagctgc 52877
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 90       cgcctcggcctcccgctccccctcgcccc 118
                |||||| ||||||| ||||||||||||||
Sbjct: 21503956 cgcctccgcctccccctccccctcgcccc 21503984



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 90       cgcctcggcctcccgctccccctcgccc 117
                |||||| ||||||| |||||||||||||
Sbjct: 21504114 cgcctccgcctccccctccccctcgccc 21504141
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 455      tggtttcatatttcaagataccact 479
                ||||||||||||| |||||||||||
Sbjct: 16232039 tggtttcatatttaaagataccact 16232015
to top
>gb|AC073385.14| Homo sapiens chromosome 8, clone RP11-304E16, complete sequence
          Length = 125535

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 183   ggcagcctcctcgtcagctgc 203
             |||||||||||||||||||||
Sbjct: 32640 ggcagcctcctcgtcagctgc 32660
to top
>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0031D11
          Length = 138108

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 90    cgcctcggcctcccgctccccctcgcccc 118
             |||||| ||||||| ||||||||||||||
Sbjct: 30239 cgcctccgcctccccctccccctcgcccc 30267



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 90    cgcctcggcctcccgctccccctcgcccc 118
             |||||| ||||||| ||||||||||||||
Sbjct: 30147 cgcctccgcctccccctccccctcgcccc 30175
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 74      tgcagctgctctccggcgcctcggcctcc 102
               ||||||||||||||| |||||||| ||||
Sbjct: 6713478 tgcagctgctctccgacgcctcggtctcc 6713450
to top
>dbj|AP004679.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0021N09
          Length = 156565

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 455    tggtttcatatttcaagataccact 479
              ||||||||||||| |||||||||||
Sbjct: 151119 tggtttcatattttaagataccact 151095
to top
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0567G03
          Length = 196834

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 455   tggtttcatatttcaagataccact 479
             ||||||||||||| |||||||||||
Sbjct: 87202 tggtttcatattttaagataccact 87226
to top
>dbj|AP005096.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1104G07
          Length = 119643

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 455   tggtttcatatttcaagataccact 479
             ||||||||||||| |||||||||||
Sbjct: 22217 tggtttcatatttaaagataccact 22193
to top
>dbj|AK119697.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-D01, full
           insert sequence
          Length = 747

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 455 tggtttcatatttcaagataccact 479
           ||||||||||||| |||||||||||
Sbjct: 543 tggtttcatatttaaagataccact 567
to top
>dbj|AK106035.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-D07, full
           insert sequence
          Length = 1002

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 455 tggtttcatatttcaagataccact 479
           ||||||||||||| |||||||||||
Sbjct: 466 tggtttcatatttaaagataccact 490
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>dbj|AK102838.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109M01, full
           insert sequence
          Length = 2519

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 455 tggtttcatatttcaagataccact 479
           ||||||||||||| |||||||||||
Sbjct: 963 tggtttcatatttaaagataccact 987
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>gb|AC134542.3| Mus musculus BAC clone RP24-441E15 from 6, complete sequence
          Length = 175750

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 306   gattgatgctatagcagaagc 326
             |||||||||||||||||||||
Sbjct: 89744 gattgatgctatagcagaagc 89764
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>ref|NM_190532.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 942

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 54 gccggcgacagcggcggcga 73
          ||||||||||||||||||||
Sbjct: 98 gccggcgacagcggcggcga 79
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>gb|AC165307.6| Mus musculus chromosome 3, clone RP24-372I24, complete sequence
          Length = 136853

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    attgatgctatagcagaagc 326
              ||||||||||||||||||||
Sbjct: 127206 attgatgctatagcagaagc 127187
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>gb|AC132252.2| Mus musculus BAC clone RP24-450A24 from chromosome 15, complete sequence
          Length = 180985

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 566    atgggatgagaagcattatcaacc 589
              |||||||||| |||||||||||||
Sbjct: 156055 atgggatgagcagcattatcaacc 156032
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>gb|AC122447.4| Mus musculus BAC clone RP24-240O5 from chromosome 9, complete sequence
          Length = 158058

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    ctccccctcgcccctcccct 124
              ||||||||||||||||||||
Sbjct: 134686 ctccccctcgcccctcccct 134667
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>gb|AC098705.2| Mus musculus BAC clone RP23-1B19 from 3, complete sequence
          Length = 202444

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 307   attgatgctatagcagaagc 326
             ||||||||||||||||||||
Sbjct: 63925 attgatgctatagcagaagc 63906
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>gb|AC101827.10| Mus musculus chromosome 15, clone RP24-426P14, complete sequence
          Length = 125196

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 566   atgggatgagaagcattatcaacc 589
             |||||||||| |||||||||||||
Sbjct: 41923 atgggatgagcagcattatcaacc 41946
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>gb|AC149065.4| Mus musculus BAC clone RP23-121I6 from chromosome 7, complete sequence
          Length = 208092

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 98    cctcccgctccccctcgcccctcccctt 125
             |||||| ||||||||| |||||||||||
Sbjct: 90647 cctccccctccccctcccccctcccctt 90620
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>gb|AY043329.1| Streptomyces lividans ethidium bromide resistance operon, commplete
           sequence
          Length = 1792

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 48  ggtggtgccggcgacagcggcggcgatg 75
           |||||||||||||||  |||||||||||
Sbjct: 437 ggtggtgccggcgacctcggcggcgatg 410
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>emb|CR450812.5| Zebrafish DNA sequence from clone CH211-161H7, complete sequence
          Length = 154456

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   gattcgagatgattgatgct 315
             ||||||||||||||||||||
Sbjct: 30578 gattcgagatgattgatgct 30559
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>ref|XM_795315.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
            LOC586764 (LOC586764), mRNA
          Length = 2151

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 20   ccatccaaattactactggt 39
            ||||||||||||||||||||
Sbjct: 1453 ccatccaaattactactggt 1472
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>emb|AL133378.16| Human DNA sequence from clone RP1-91B17 on chromosome 6q13-14.3
             Contains part of the BAI3 gene for brain-specific
             angiogenesis inhibitor 3, complete sequence
          Length = 113826

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 468   caagataccacttaatcaag 487
             ||||||||||||||||||||
Sbjct: 91121 caagataccacttaatcaag 91102
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>ref|XM_794779.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
            LOC576027 (LOC576027), mRNA
          Length = 2690

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 20   ccatccaaattactactggt 39
            ||||||||||||||||||||
Sbjct: 1543 ccatccaaattactactggt 1562
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 398     tcatgcttgccaagccgcaa 417
               ||||||||||||||||||||
Sbjct: 3093076 tcatgcttgccaagccgcaa 3093095
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>gb|AC163342.2| Mus musculus BAC clone RP24-115M13 from chromosome 9, complete sequence
          Length = 204620

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 98     cctcccgctccccctcgcccctcccctt 125
              |||||| ||||||||| |||||||||||
Sbjct: 161761 cctccccctccccctcccccctcccctt 161734
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>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29
          Length = 283100

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 48     ggtggtgccggcgacagcggcggcgatg 75
              |||||||||||||||  |||||||||||
Sbjct: 233433 ggtggtgccggcgacctcggcggcgatg 233460
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>gb|AC111654.6| Rattus norvegicus Chr BAC CH230-108G17 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 231706

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 105   ctccccctcgcccctccccttgtt 128
             ||||||||| ||||||||||||||
Sbjct: 51991 ctccccctcccccctccccttgtt 51968
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>gb|AE011678.1| Xanthomonas axonopodis pv. citri str. 306,  section 56 of 469 of the
            complete genome
          Length = 12249

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   cggcgacagcggcggcgatg 75
            ||||||||||||||||||||
Sbjct: 9803 cggcgacagcggcggcgatg 9822
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>gb|AC153651.4| Mus musculus BAC clone RP24-74B24 from chromosome 7, complete sequence
          Length = 256298

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 98     cctcccgctccccctcgcccctcccctt 125
              |||||| ||||||||| |||||||||||
Sbjct: 228280 cctccccctccccctcccccctcccctt 228307
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>gb|AC151714.3| Mus musculus BAC clone RP23-437A9 from chromosome 9, complete sequence
          Length = 217761

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   ctccccctcgcccctcccct 124
             ||||||||||||||||||||
Sbjct: 59753 ctccccctcgcccctcccct 59734
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>gb|AC092614.2| Homo sapiens BAC clone RP11-192M8 from 2, complete sequence
          Length = 106992

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 475   ccacttaatcaagttgttgtgatg 498
             |||||| |||||||||||||||||
Sbjct: 41925 ccactttatcaagttgttgtgatg 41902
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>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0408C03
          Length = 141273

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    gccggcgacagcggcggcga 73
             ||||||||||||||||||||
Sbjct: 65454 gccggcgacagcggcggcga 65473
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>gb|AC134829.3| Mus musculus BAC clone RP24-491N21 from 6, complete sequence
          Length = 173494

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    attgatgctatagcagaagc 326
              ||||||||||||||||||||
Sbjct: 163394 attgatgctatagcagaagc 163413
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>gb|AC132613.4| Mus musculus BAC clone RP23-285C21 from 6, complete sequence
          Length = 221317

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    attgatgctatagcagaagc 326
              ||||||||||||||||||||
Sbjct: 201734 attgatgctatagcagaagc 201715
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>gb|AY450930.1| Chlamydomonas reinhardtii plus agglutinin (SAG1) gene, complete cds;
             and unknown gene
          Length = 18555

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    cggcgacagcggcggcgatg 75
             ||||||||||||||||||||
Sbjct: 13462 cggcgacagcggcggcgatg 13443
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 215     acggcggcgcgcggaagccg 234
               ||||||||||||||||||||
Sbjct: 4205817 acggcggcgcgcggaagccg 4205798
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>gb|AC140409.3| Mus musculus BAC clone RP23-138K22 from 9, complete sequence
          Length = 200157

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   gctccccctcgcccctcccc 123
             ||||||||||||||||||||
Sbjct: 92292 gctccccctcgcccctcccc 92311
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>emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chromosome 9, complete
              sequence
          Length = 218753

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 98     cctcccgctccccctcgcccctcccctt 125
              |||||| ||||||||| |||||||||||
Sbjct: 123802 cctccccctccccctcccccctcccctt 123829
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>gb|AC161507.2| Mus musculus chromosome 5, clone RP23-76L18, complete sequence
          Length = 262831

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    ctccccctcgcccctcccct 124
              ||||||||||||||||||||
Sbjct: 149192 ctccccctcgcccctcccct 149173
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>emb|AL627099.13| Mouse DNA sequence from clone RP23-306F22 on chromosome 4, complete
             sequence
          Length = 169469

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 98    cctcccgctccccctcgcccctcccctt 125
             |||||| ||||||||| |||||||||||
Sbjct: 51147 cctccccctccccctctcccctcccctt 51120
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>gb|M11392.1|CHKH33A1 Chicken histone gene encoding replacement variant H3.3A, segment 1 of
            2
          Length = 3897

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 441  gtctgttgggcagttggttt 460
            ||||||||||||||||||||
Sbjct: 3503 gtctgttgggcagttggttt 3522


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,510,445
Number of Sequences: 3902068
Number of extensions: 4510445
Number of successful extensions: 195226
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 194318
Number of HSP's gapped (non-prelim): 906
length of query: 598
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 575
effective length of database: 17,143,297,704
effective search space: 9857396179800
effective search space used: 9857396179800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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