Clone Name | bart54c11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SYD_MAGMM (Q2W3D5) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspar... | 28 | 7.1 |
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>SYD_MAGMM (Q2W3D5) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 876 Score = 28.1 bits (61), Expect = 7.1 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 10/39 (25%) Frame = -2 Query: 117 HVESADEEGQGGDAANGEHGGQR----------EQLGRN 31 H E+A + GQGGDAA +H R EQ+GR+ Sbjct: 82 HHEAAAQAGQGGDAARHQHRVDRLGQHHVRAAFEQVGRH 120 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,751,598 Number of Sequences: 219361 Number of extensions: 85308 Number of successful extensions: 543 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 484 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 541 length of database: 80,573,946 effective HSP length: 15 effective length of database: 77,283,531 effective search space used: 1854804744 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)