Clone Name | bart54c04 |
---|---|
Clone Library Name | barley_pub |
>CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein)| Length = 262 Score = 128 bits (322), Expect = 9e-30 Identities = 84/174 (48%), Positives = 86/174 (49%), Gaps = 8/174 (4%) Frame = +1 Query: 31 MEDERSTQSYQGAEA-DQVEVTDRXXXXXXXXXXXXXXXXXXXXXXVTGMXXXXXXX--- 198 MEDERSTQSYQG EA +QVEVTDR VTGM Sbjct: 1 MEDERSTQSYQGGEAAEQVEVTDRGLLGNLLGKKKAEEDKEKEEELVTGMEKVSVEEPEV 60 Query: 199 -XXXXXDGEKKETLFSKLHRXXXXXXXXXXXXXXXXVIDENXXXXXXXXXXXXXXXXXXX 375 DGEKKETLFSKLHR VID+N Sbjct: 61 KKEEHEDGEKKETLFSKLHRSSSSSSSSSDEEEEE-VIDDNGEVIKRKKKKGLKEKLQGK 119 Query: 376 XXXXXDNEAEHVTGLPAPMAPASVQTH---HDTDVVVEKIDGDAKTEATPAVPE 528 D E EHVTGLPAP APASVQTH HDTDVVVEKIDGD KTEA PAVPE Sbjct: 120 LPGHKDTEGEHVTGLPAPAAPASVQTHGGHHDTDVVVEKIDGDVKTEAAPAVPE 173
>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) Length = 5085 Score = 32.3 bits (72), Expect = 0.83 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +1 Query: 418 LPAPMAPASVQTHHDTDVVVEKIDGDAKTEATPAVPE 528 +PAP P+S +T T V +K + + KTEA VPE Sbjct: 1088 MPAPAEPSSQKTPTGTQVKGKKKEAEGKTEAEKPVPE 1124
>DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-related formin-2)| (DRF2) (mDia3) Length = 1098 Score = 31.2 bits (69), Expect = 1.9 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = -2 Query: 103 GPCPSPPPDRPQLPGMTGCSSHPP 32 GPCP PPP P P + G PP Sbjct: 556 GPCPPPPPPPPPPPPLPGVVPPPP 579
>DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) Length = 1248 Score = 30.4 bits (67), Expect = 3.2 Identities = 13/23 (56%), Positives = 13/23 (56%) Frame = -2 Query: 100 PCPSPPPDRPQLPGMTGCSSHPP 32 P P PPP P LPG T S PP Sbjct: 601 PPPPPPPPPPPLPGGTAISPPPP 623
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 28.9 bits (63), Expect = 9.2 Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 4/27 (14%) Frame = -2 Query: 100 PCPSPPPD----RPQLPGMTGCSSHPP 32 PCPSPPP P P + C S PP Sbjct: 87 PCPSPPPKPQPKPPPAPSPSPCPSPPP 113 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.130 0.363 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,167,391 Number of Sequences: 219361 Number of extensions: 456105 Number of successful extensions: 2271 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1780 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2222 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)