ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart54b03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191983.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1236 Score = 232 bits (117), Expect = 1e-57 Identities = 177/197 (89%) Strand = Plus / Plus Query: 362 cacgccaacggcggcgccgacctctccgtcttcgagcactacgagcggatggatagaaat 421 ||||||||||||||||||||||| ||||||||||||| | ||||||| |||| || || Sbjct: 190 cacgccaacggcggcgccgacctggccgtcttcgagcagttcgagcggctggagaggaag 249 Query: 422 gttgagttgcgcaatggggcaatggatgccgggccaccgcagaaatccctacttccttct 481 || ||| |||| ||||| ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 250 gtggagctgcggaatggagcaattgaagctgggcctccgcagaaatccctacttccttct 309 Query: 482 tttgaatctgcagaaacacgcaacttagctgagacattgttgagggatatcattcgtggg 541 |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 310 tttgaatctgcagaaatgcgcaatttagctgagacattgttgagggatatcattcgtggg 369 Query: 542 agtccagacgtcaaatg 558 |||||||| |||||||| Sbjct: 370 agtccagatgtcaaatg 386 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 214 cgacgagccctccgtcacccgctggtccttccaggacttcgagcgctactacgacgcggg 273 ||||||||| ||| ||||||||||| ||||| ||||||||||| ||||||||| | | | Sbjct: 12 cgacgagccgtccatcacccgctggaccttcgaggacttcgaggtctactacgaggtgcg 71 Query: 274 cctcggcatctgccgccagccc 295 |||||||||| ||||| ||||| Sbjct: 72 cctcggcatccgccgcgagccc 93
>dbj|AK069899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035A18, full insert sequence Length = 1676 Score = 232 bits (117), Expect = 1e-57 Identities = 177/197 (89%) Strand = Plus / Plus Query: 362 cacgccaacggcggcgccgacctctccgtcttcgagcactacgagcggatggatagaaat 421 ||||||||||||||||||||||| ||||||||||||| | ||||||| |||| || || Sbjct: 318 cacgccaacggcggcgccgacctggccgtcttcgagcagttcgagcggctggagaggaag 377 Query: 422 gttgagttgcgcaatggggcaatggatgccgggccaccgcagaaatccctacttccttct 481 || ||| |||| ||||| ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 378 gtggagctgcggaatggagcaattgaagctgggcctccgcagaaatccctacttccttct 437 Query: 482 tttgaatctgcagaaacacgcaacttagctgagacattgttgagggatatcattcgtggg 541 |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 438 tttgaatctgcagaaatgcgcaatttagctgagacattgttgagggatatcattcgtggg 497 Query: 542 agtccagacgtcaaatg 558 |||||||| |||||||| Sbjct: 498 agtccagatgtcaaatg 514 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 214 cgacgagccctccgtcacccgctggtccttccaggacttcgagcgctactacgacgcggg 273 ||||||||| ||| ||||||||||| ||||| ||||||||||| || |||||| | | | Sbjct: 140 cgacgagccgtccatcacccgctggaccttcgaggacttcgaggtctgctacgaggtgcg 199 Query: 274 cctcggcatctgccgccagccc 295 |||||||||| ||||| ||||| Sbjct: 200 cctcggcatccgccgcgagccc 221
>dbj|AK065017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F15, full insert sequence Length = 1627 Score = 204 bits (103), Expect = 2e-49 Identities = 163/183 (89%) Strand = Plus / Plus Query: 376 cgccgacctctccgtcttcgagcactacgagcggatggatagaaatgttgagttgcgcaa 435 ||||||||| ||||||||||||| | ||||||| |||| || || || ||| |||| || Sbjct: 301 cgccgacctggccgtcttcgagcagttcgagcggctggagaggaaggtggagctgcggaa 360 Query: 436 tggggcaatggatgccgggccaccgcagaaatccctacttccttcttttgaatctgcaga 495 ||| ||||| || || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 361 tggagcaattgaagctgggcctccgcagaaatccctacttccttcttttgaatctgcaga 420 Query: 496 aacacgcaacttagctgagacattgttgagggatatcattcgtgggagtccagacgtcaa 555 || ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 421 aatgcgcaatttagctgagacattgttgagggatatcattcgtgggagtccagatgtcaa 480 Query: 556 atg 558 ||| Sbjct: 481 atg 483 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 214 cgacgagccctccgtcacccgctggtccttccaggacttcgagcgctactacgacgcggg 273 ||||||||| ||| ||||||||||| ||||| ||||||||||| ||||||||| | | | Sbjct: 129 cgacgagccgtccatcacccgctggaccttcgaggacttcgaggtctactacgaggtgcg 188 Query: 274 cctcggcatctgccgccagccc 295 |||||||||| ||||| ||||| Sbjct: 189 cctcggcatccgccgcgagccc 210
>gb|AY107250.1| Zea mays PCO068082 mRNA sequence Length = 1198 Score = 167 bits (84), Expect = 5e-38 Identities = 171/200 (85%) Strand = Plus / Plus Query: 359 gcccacgccaacggcggcgccgacctctccgtcttcgagcactacgagcggatggataga 418 |||| ||||||||||||||| |||||| ||||||||||||| | |||||||||||| || Sbjct: 305 gcccgcgccaacggcggcgcggacctcgccgtcttcgagcagttcgagcggatggagagg 364 Query: 419 aatgttgagttgcgcaatggggcaatggatgccgggccaccgcagaaatccctacttcct 478 || || ||| | ||||||| || || || | || |||| ||||||||| ||||||||| Sbjct: 365 aaggtggagataagcaatggagctatagaggatggtccactgcagaaatctctacttcct 424 Query: 479 tcttttgaatctgcagaaacacgcaacttagctgagacattgttgagggatatcattcgt 538 || |||||||||||||||| ||||||||||||||||||||||| |||||||| |||||| Sbjct: 425 tcatttgaatctgcagaaatgcgcaacttagctgagacattgttaagggatataattcgt 484 Query: 539 gggagtccagacgtcaaatg 558 || |||||||| || ||||| Sbjct: 485 ggaagtccagatgttaaatg 504
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 109 bits (55), Expect = 1e-20 Identities = 64/67 (95%) Strand = Plus / Minus Query: 460 gcagaaatccctacttccttcttttgaatctgcagaaacacgcaacttagctgagacatt 519 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 27658704 gcagaaatccctacttccttcttttgaatctgcagaaatgcgcaatttagctgagacatt 27658645 Query: 520 gttgagg 526 ||||||| Sbjct: 27658644 gttgagg 27658638 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 362 cacgccaacggcggcgccgacctctccgtcttcgagcactacgagcgg 409 ||||||||||||||||||||||| ||||||||||||| | ||||||| Sbjct: 27659547 cacgccaacggcggcgccgacctggccgtcttcgagcagttcgagcgg 27659500 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 524 agggatatcattcgtgggagtccagacgtcaaatg 558 |||||||||||||||||||||||||| |||||||| Sbjct: 27658543 agggatatcattcgtgggagtccagatgtcaaatg 27658509 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 245 caggacttcgagcgctactacgacgcgggcctcggcatctgccgccagccc 295 |||||||||||| ||||||||| | | ||||||||||| ||||| ||||| Sbjct: 27659694 caggacttcgaggtctactacgaggtgcgcctcggcatccgccgcgagccc 27659644 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagcaacgacgacg 329 ||||||||||||||||||| ||| ||||| Sbjct: 40577068 cgacggcgacggcgacagcgacggcgacg 40577096 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagcaacg 323 |||||||||||||||||| |||||| Sbjct: 39205182 ggcgacggcgacggcgacggcaacg 39205206 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagcaacgacga 327 |||||||||||||||||| || ||||||| Sbjct: 9857837 ggcgacggcgacggcgacggcgacgacga 9857865 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 33124497 cgatgccgcccacgccaccggcgg 33124520 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 33103869 cgatgccgcccacgccaccggcgg 33103892 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cgacggcgacggcgacagca 320 |||||||||||||||||||| Sbjct: 19151845 cgacggcgacggcgacagca 19151826
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 109 bits (55), Expect = 1e-20 Identities = 64/67 (95%) Strand = Plus / Minus Query: 460 gcagaaatccctacttccttcttttgaatctgcagaaacacgcaacttagctgagacatt 519 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 67270 gcagaaatccctacttccttcttttgaatctgcagaaatgcgcaatttagctgagacatt 67211 Query: 520 gttgagg 526 ||||||| Sbjct: 67210 gttgagg 67204 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 362 cacgccaacggcggcgccgacctctccgtcttcgagcactacgagcgg 409 ||||||||||||||||||||||| ||||||||||||| | ||||||| Sbjct: 68113 cacgccaacggcggcgccgacctggccgtcttcgagcagttcgagcgg 68066 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 524 agggatatcattcgtgggagtccagacgtcaaatg 558 |||||||||||||||||||||||||| |||||||| Sbjct: 67109 agggatatcattcgtgggagtccagatgtcaaatg 67075 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 245 caggacttcgagcgctactacgacgcgggcctcggcatctgccgccagccc 295 |||||||||||| ||||||||| | | ||||||||||| ||||| ||||| Sbjct: 68260 caggacttcgaggtctactacgaggtgcgcctcggcatccgccgcgagccc 68210
>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0007F06 Length = 150817 Score = 109 bits (55), Expect = 1e-20 Identities = 64/67 (95%) Strand = Plus / Minus Query: 460 gcagaaatccctacttccttcttttgaatctgcagaaacacgcaacttagctgagacatt 519 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 125998 gcagaaatccctacttccttcttttgaatctgcagaaatgcgcaatttagctgagacatt 125939 Query: 520 gttgagg 526 ||||||| Sbjct: 125938 gttgagg 125932 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 362 cacgccaacggcggcgccgacctctccgtcttcgagcactacgagcgg 409 ||||||||||||||||||||||| ||||||||||||| | ||||||| Sbjct: 126841 cacgccaacggcggcgccgacctggccgtcttcgagcagttcgagcgg 126794 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 524 agggatatcattcgtgggagtccagacgtcaaatg 558 |||||||||||||||||||||||||| |||||||| Sbjct: 125837 agggatatcattcgtgggagtccagatgtcaaatg 125803 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 245 caggacttcgagcgctactacgacgcgggcctcggcatctgccgccagccc 295 |||||||||||| ||||||||| | | ||||||||||| ||||| ||||| Sbjct: 126988 caggacttcgaggtctactacgaggtgcgcctcggcatccgccgcgagccc 126938
>gb|BT018813.1| Zea mays clone EL01N0530F04.d mRNA sequence Length = 1691 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 512 gagacattgttgagggatatcattcgtgggagtccagacgtcaaatg 558 |||||||||||||||||||| ||||| ||||| ||||| || ||||| Sbjct: 346 gagacattgttgagggatattattcgcgggagcccagatgtgaaatg 392
>gb|AY104519.1| Zea mays PCO113699 mRNA sequence Length = 1696 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 512 gagacattgttgagggatatcattcgtgggagtccagacgtcaaatg 558 |||||||||||||||||||| ||||| ||||| ||||| || ||||| Sbjct: 605 gagacattgttgagggatattattcgcgggagcccagatgtgaaatg 651
>gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genomic sequence, complete sequence Length = 112892 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 364 cgccaacggcggcgccgacctctccgtcttcgagcactacgagcgg 409 ||||||||| ||||||||||| ||||||||||||| | ||||||| Sbjct: 24372 cgccaacggtggcgccgacctggccgtcttcgagcagttcgagcgg 24417
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 364 cgccaacggcggcgccgacctctccgtcttcgagcactacgagcgg 409 ||||||||| ||||||||||| ||||||||||||| | ||||||| Sbjct: 29825089 cgccaacggtggcgccgacctggccgtcttcgagcagttcgagcgg 29825044 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagcaacgacgac 328 |||||||||||||||||| || |||||||| Sbjct: 33018652 ggcgacggcgacggcgacggcgacgacgac 33018681 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagca 320 |||||||||||||||||||||| Sbjct: 7356191 ggcgacggcgacggcgacagca 7356212 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 gcgacggcgacggcgacagca 320 ||||||||||||||||||||| Sbjct: 18709616 gcgacggcgacggcgacagca 18709596 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 368 aacggcggcgccgacctctccgtc 391 ||||| |||||||||||||||||| Sbjct: 15051123 aacggtggcgccgacctctccgtc 15051100 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagcaacgacg 326 |||||||||||||||||| || |||||| Sbjct: 12407037 ggcgacggcgacggcgacggcgacgacg 12407064 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 8235298 cgatgccgcccacgccaccggcgg 8235275 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 1240525 cgatgccgcccacgccaccggcgg 1240548
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacgacgac 328 |||||||||||||||||| ||||||||||| Sbjct: 1334644 ggcgacggcgacggcgacggcaacgacgac 1334615 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 303 acggcgacggcgacagcaacgacgac 328 |||||||||||||| ||||||||||| Sbjct: 3072052 acggcgacggcgacggcaacgacgac 3072077 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 gcccggatcgggcgccgccg 353 |||||||||||||||||||| Sbjct: 436566 gcccggatcgggcgccgccg 436585
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 364 cgccaacggcggcgccgacctctccgtcttcgagcactacgagcgg 409 ||||||||| ||||||||||| ||||||||||||| | ||||||| Sbjct: 2068481 cgccaacggtggcgccgacctggccgtcttcgagcagttcgagcgg 2068526 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 364 cgccaacggcggcgccgacctctccgtcttcgagcactacgagcgg 409 ||||||||| ||||||||||| ||||||||||||| | ||||||| Sbjct: 2054625 cgccaacggtggcgccgacctggccgtcttcgagcagttcgagcgg 2054670 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cgacggcgacggcgacagca 320 |||||||||||||||||||| Sbjct: 14619447 cgacggcgacggcgacagca 14619428 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 12798604 cgatgccgcccacgccaccggcgg 12798581
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 364 cgccaacggcggcgccgacctctccgtcttcgagcactacgagcgg 409 ||||||||| ||||||||||| ||||||||||||| | ||||||| Sbjct: 29916511 cgccaacggtggcgccgacctggccgtcttcgagcagttcgagcgg 29916466 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagcaacgacgac 328 |||||||||||||||||| || |||||||| Sbjct: 33109162 ggcgacggcgacggcgacggcgacgacgac 33109191 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagca 320 |||||||||||||||||||||| Sbjct: 7354086 ggcgacggcgacggcgacagca 7354107 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 gcgacggcgacggcgacagca 320 ||||||||||||||||||||| Sbjct: 18703657 gcgacggcgacggcgacagca 18703637 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 368 aacggcggcgccgacctctccgtc 391 ||||| |||||||||||||||||| Sbjct: 15045657 aacggtggcgccgacctctccgtc 15045634 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagcaacgacg 326 |||||||||||||||||| || |||||| Sbjct: 12403800 ggcgacggcgacggcgacggcgacgacg 12403827 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 8233133 cgatgccgcccacgccaccggcgg 8233110 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 1240523 cgatgccgcccacgccaccggcgg 1240546
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 364 cgccaacggcggcgccgacctctccgtcttcgagcactacgagcgg 409 ||||||||| ||||||||||| ||||||||||||| | ||||||| Sbjct: 89343 cgccaacggtggcgccgacctggccgtcttcgagcagttcgagcgg 89388 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 364 cgccaacggcggcgccgacctctccgtcttcgagcactacgagcgg 409 ||||||||| ||||||||||| ||||||||||||| | ||||||| Sbjct: 75487 cgccaacggtggcgccgacctggccgtcttcgagcagttcgagcgg 75532
>dbj|AP006391.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09E08, TM0265, complete sequence Length = 100864 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 524 agggatatcattcgtgggagtccaga 549 |||||||||||||||||||||||||| Sbjct: 41120 agggatatcattcgtgggagtccaga 41095
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagcaacgacgacg 329 |||||| |||||||||||||| ||||||||| Sbjct: 21850616 ggcgacagcgacggcgacagccacgacgacg 21850646 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacgacgacgcg 331 |||| ||||||||||||| || ||||||||||| Sbjct: 10293152 ggcggcggcgacggcgacggcgacgacgacgcg 10293120 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gcgacggcgacggcgacagc 319 |||||||||||||||||||| Sbjct: 14732960 gcgacggcgacggcgacagc 14732941 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagca 320 |||||||||||||||||||| Sbjct: 8655957 cgacggcgacggcgacagca 8655976 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagc 319 |||||||||||||||||||| Sbjct: 6577563 gcgacggcgacggcgacagc 6577582 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacag 318 |||||||||||||||||||| Sbjct: 6577453 ggcgacggcgacggcgacag 6577472
>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041B22 Length = 142446 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagcaacgacgacg 329 |||||| |||||||||||||| ||||||||| Sbjct: 64292 ggcgacagcgacggcgacagccacgacgacg 64322
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagcaacgacgacg 329 ||||||||| |||||||| |||||||||||| Sbjct: 852766 ggcgacggcaacggcgacggcaacgacgacg 852796 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagcaacg 323 |||||||||||| ||||||||||| Sbjct: 1133200 gcgacggcgacgacgacagcaacg 1133223
>ref|NM_185044.1| Oryza sativa (japonica cultivar-group), mRNA Length = 891 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacgacgac 328 |||||||||||||||||| || |||||||| Sbjct: 879 ggcgacggcgacggcgacggcgacgacgac 850
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 306 gcgacggcgacagcaacgacga 327 |||||||||||||||||||||| Sbjct: 320333 gcgacggcgacagcaacgacga 320354 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 cggcgacagcaacgacgacgc 330 ||||||||||||||||||||| Sbjct: 157533 cggcgacagcaacgacgacgc 157553
>gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052O08 map MAP_LOC, complete sequence Length = 154839 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagca 320 |||||||||||||||||||||| Sbjct: 62187 ggcgacggcgacggcgacagca 62208
>gb|BC073173.1| Homo sapiens regucalcin (senescence marker protein-30), transcript variant 1, mRNA (cDNA clone MGC:87766 IMAGE:6186669), complete cds Length = 1560 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 gggcgacggcgacggcgacagc 319 |||||||||||||||||||||| Sbjct: 118 gggcgacggcgacggcgacagc 97
>ref|NM_001018111.1| Homo sapiens podocalyxin-like (PODXL), transcript variant 1, mRNA Length = 5999 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 297 agggcgacggcgacggcgacagcaacgacg 326 |||||||||||||||||||| || |||||| Sbjct: 341 agggcgacggcgacggcgacggcgacgacg 312
>ref|NM_005397.2| Homo sapiens podocalyxin-like (PODXL), transcript variant 2, mRNA Length = 5903 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 297 agggcgacggcgacggcgacagcaacgacg 326 |||||||||||||||||||| || |||||| Sbjct: 341 agggcgacggcgacggcgacggcgacgacg 312
>gb|BC058880.1| Homo sapiens regucalcin (senescence marker protein-30), mRNA (cDNA clone IMAGE:5731957), partial cds Length = 2207 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 gggcgacggcgacggcgacagc 319 |||||||||||||||||||||| Sbjct: 241 gggcgacggcgacggcgacagc 220
>emb|AL513366.11| Human DNA sequence from clone CTD-2522E6 on chromosome X Contains the RGN gene for regucalcin (senescence marker protein-30) (RC, SMP30), the gene for neuronal protein 17.3 (P17.3), the RBM10 gene for RNA binding motif protein 10 (MGC997, MGC1132, DXS8237E, KIAA0122), an inositol 1,3,4-triphosphate 5/6 kinase (ITPK1) pseudogene, the UBE1 gene for ubiquitin-activating enzyme E1 (A1S9T and BN75 temperature sensitivity complementing) (A1S9, A1ST, GXP1, A1S9T, UBE1X, MGC4781), the 5' UTR of the PCTK1 gene for PCTAIRE protein kinase 1 and five CpG islands, complete sequence Length = 145456 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 gggcgacggcgacggcgacagc 319 |||||||||||||||||||||| Sbjct: 3703 gggcgacggcgacggcgacagc 3682
>ref|XM_964677.1| PREDICTED: Tribolium castaneum similar to CG9403-PA, isoform A (LOC658276), mRNA Length = 2542 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacgacgac 328 ||||||||||||||||||| | |||||||| Sbjct: 1602 ggcgacggcgacggcgacaacgacgacgac 1573
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 343 gggcgccgccgatgccgcccacgcca 368 |||||||| ||||||||||||||||| Sbjct: 93327 gggcgccgacgatgccgcccacgcca 93352
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 343 gggcgccgccgatgccgcccacgcca 368 |||||||| ||||||||||||||||| Sbjct: 10542 gggcgccgacgatgccgcccacgcca 10567
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 343 gggcgccgccgatgccgcccacgcca 368 |||||||| ||||||||||||||||| Sbjct: 123880 gggcgccgacgatgccgcccacgcca 123855
>emb|CR859918.1| Pongo pygmaeus mRNA; cDNA DKFZp469I032 (from clone DKFZp469I032) Length = 1630 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 gggcgacggcgacggcgacagc 319 |||||||||||||||||||||| Sbjct: 246 gggcgacggcgacggcgacagc 225
>gb|BC050371.1| Homo sapiens regucalcin (senescence marker protein-30), mRNA (cDNA clone IMAGE:5760604), containing frame-shift errors Length = 2045 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 gggcgacggcgacggcgacagc 319 |||||||||||||||||||||| Sbjct: 242 gggcgacggcgacggcgacagc 221
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagca 320 |||||||||||||||||||||| Sbjct: 107447 ggcgacggcgacggcgacagca 107468
>ref|NM_152869.2| Homo sapiens regucalcin (senescence marker protein-30) (RGN), transcript variant 2, mRNA Length = 2255 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 gggcgacggcgacggcgacagc 319 |||||||||||||||||||||| Sbjct: 283 gggcgacggcgacggcgacagc 262
>ref|NM_004683.4| Homo sapiens regucalcin (senescence marker protein-30) (RGN), transcript variant 1, mRNA Length = 1635 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 gggcgacggcgacggcgacagc 319 |||||||||||||||||||||| Sbjct: 283 gggcgacggcgacggcgacagc 262
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 346 cgccgccgatgccgcccacgcc 367 |||||||||||||||||||||| Sbjct: 3374791 cgccgccgatgccgcccacgcc 3374812
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagca 320 |||||||||||||||||||||| Sbjct: 88369 ggcgacggcgacggcgacagca 88390
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagca 320 |||||||||||||||||||||| Sbjct: 4280677 ggcgacggcgacggcgacagca 4280698 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 cggcgacggcgacagcaacgacga 327 ||||||| |||||||||||||||| Sbjct: 17627211 cggcgactgcgacagcaacgacga 17627234 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 gcgccgccgatgccgcccac 364 |||||||||||||||||||| Sbjct: 12465871 gcgccgccgatgccgcccac 12465890 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 caagggcgacggcgacggcg 314 |||||||||||||||||||| Sbjct: 12182972 caagggcgacggcgacggcg 12182991 Score = 40.1 bits (20), Expect = 7.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 300 gcgacggcgacggcgacagcaacgacgacgcg 331 ||||||||||||||||| || ||||||||||| Sbjct: 3424024 gcgacggcgacggcgac-gcgacgacgacgcg 3423994
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 303 acggcgacggcgacagcaacgacgac 328 ||||||||||||||||||||| |||| Sbjct: 5654716 acggcgacggcgacagcaacggcgac 5654741 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 356 gccgcccacgccaacggcggcgccg 380 |||||||||||| |||||||||||| Sbjct: 21019496 gccgcccacgcccacggcggcgccg 21019520 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagcaacgacgac 328 |||||||||||||||||||| ||| |||| Sbjct: 5704692 gcgacggcgacggcgacagcgacggcgac 5704720 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagc 319 |||||||||||||||||||| Sbjct: 8039769 gcgacggcgacggcgacagc 8039788
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagca 320 |||||||||||||||||||||| Sbjct: 33014733 ggcgacggcgacggcgacagca 33014712 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagca 320 ||||||||||||||||||||| Sbjct: 10836005 gcgacggcgacggcgacagca 10836025 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacg 323 |||||||||||||||||| |||||| Sbjct: 7430493 ggcgacggcgacggcgacggcaacg 7430469 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagcaacgacgac 328 |||||||||||||||| || |||||||| Sbjct: 23045080 cgacggcgacggcgacggcgacgacgac 23045107
>dbj|AK223573.1| Homo sapiens mRNA for podocalyxin-like precursor variant, clone: FCC129D02 Length = 2056 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 297 agggcgacggcgacggcgacagcaacgacg 326 |||||||||||||||||||| || |||||| Sbjct: 341 agggcgacggcgacggcgacggcgacgacg 312
>dbj|AK223360.1| Homo sapiens mRNA for regucalcin variant, clone: FCC101A02 Length = 1631 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 gggcgacggcgacggcgacagc 319 |||||||||||||||||||||| Sbjct: 304 gggcgacggcgacggcgacagc 283
>gb|BC093730.1| Homo sapiens podocalyxin-like, mRNA (cDNA clone MGC:120765 IMAGE:7939575), complete cds Length = 1672 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 297 agggcgacggcgacggcgacagcaacgacg 326 |||||||||||||||||||| || |||||| Sbjct: 111 agggcgacggcgacggcgacggcgacgacg 82
>gb|AC008264.10|AC008264 Homo sapiens chromosome 7 clone RP11-180C16, complete sequence Length = 162694 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 297 agggcgacggcgacggcgacagcaacgacg 326 |||||||||||||||||||| || |||||| Sbjct: 65730 agggcgacggcgacggcgacggcgacgacg 65759
>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete sequence Length = 139823 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacgacgac 328 |||||||||||||||||| || |||||||| Sbjct: 104656 ggcgacggcgacggcgacggcgacgacgac 104627
>gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence Length = 268433 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagcaacgacg 326 ||||| |||||||||||||||||||| Sbjct: 152364 cgacgacgacggcgacagcaacgacg 152389
>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_A01 Length = 139121 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagca 320 |||||||||||||||||||||| Sbjct: 60673 ggcgacggcgacggcgacagca 60652
>dbj|AP005893.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0030K05 Length = 157835 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 303 acggcgacggcgacagcaacgacgac 328 ||||||||||||||||||||| |||| Sbjct: 89394 acggcgacggcgacagcaacggcgac 89419 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagcaacgacgac 328 |||||||||||||||||||| ||| |||| Sbjct: 139370 gcgacggcgacggcgacagcgacggcgac 139398
>dbj|AK102475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094I01, full insert sequence Length = 1182 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagca 320 |||||||||||||||||||||| Sbjct: 869 ggcgacggcgacggcgacagca 848
>gb|BC112035.1| Homo sapiens podocalyxin-like, transcript variant 2, mRNA (cDNA clone MGC:138240 IMAGE:8327503), complete cds Length = 1684 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 297 agggcgacggcgacggcgacagcaacgacg 326 |||||||||||||||||||| || |||||| Sbjct: 123 agggcgacggcgacggcgacggcgacgacg 94
>ref|NM_208607.1| Eremothecium gossypii ACL150Wp (ACL150W), mRNA Length = 660 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagca 320 |||||||||||||||||||||| Sbjct: 625 ggcgacggcgacggcgacagca 646
>dbj|AK063877.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-F04, full insert sequence Length = 410 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagca 320 |||||||||||||||||||||| Sbjct: 60 ggcgacggcgacggcgacagca 81
>dbj|AK063399.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-H12, full insert sequence Length = 1868 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagca 320 |||||||||||||||||||||| Sbjct: 865 ggcgacggcgacggcgacagca 844
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagca 320 |||||||||||||||||||||| Sbjct: 4289371 ggcgacggcgacggcgacagca 4289392 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 cggcgacggcgacagcaacgacga 327 ||||||| |||||||||||||||| Sbjct: 17721939 cggcgactgcgacagcaacgacga 17721962 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 gcgccgccgatgccgcccac 364 |||||||||||||||||||| Sbjct: 12545178 gcgccgccgatgccgcccac 12545197 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 caagggcgacggcgacggcg 314 |||||||||||||||||||| Sbjct: 12262279 caagggcgacggcgacggcg 12262298 Score = 40.1 bits (20), Expect = 7.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 300 gcgacggcgacggcgacagcaacgacgacgcg 331 ||||||||||||||||| || ||||||||||| Sbjct: 3432728 gcgacggcgacggcgac-gcgacgacgacgcg 3432698
>dbj|D10451.1|SH1PK Pseudorabies virus (PRV) protein kinase gene, complete cds Length = 1403 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagca 320 |||||||||||||||||||||| Sbjct: 394 ggcgacggcgacggcgacagca 415
>dbj|AB028184.1| Oryza sativa mRNA for OsNAC5 protein, complete cds Length = 1751 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagca 320 |||||||||||||||||||||| Sbjct: 875 ggcgacggcgacggcgacagca 854
>dbj|AB032064.1| Homo sapiens mRNA for regucalcin, complete cds Length = 1438 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 298 gggcgacggcgacggcgacagc 319 |||||||||||||||||||||| Sbjct: 86 gggcgacggcgacggcgacagc 65
>gb|AC114617.16| Mus musculus chromosome 5, clone RP24-84E3, complete sequence Length = 200977 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 aaatccctacttccttctttt 484 ||||||||||||||||||||| Sbjct: 82341 aaatccctacttccttctttt 82321
>ref|XM_464996.1| Oryza sativa (japonica cultivar-group), mRNA Length = 510 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagca 320 ||||||||||||||||||||| Sbjct: 140 gcgacggcgacggcgacagca 160
>ref|NM_190308.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 930 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacg 323 |||||||||||||||||| |||||| Sbjct: 198 ggcgacggcgacggcgacggcaacg 174
>ref|XM_463673.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 735 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagcaacgacgacg 329 ||||||||||||||||||| ||| ||||| Sbjct: 414 cgacggcgacggcgacagcgacggcgacg 442
>ref|XM_477426.1| Oryza sativa (japonica cultivar-group), mRNA Length = 519 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagcaacgacgacgcg 331 |||| ||||||||||||| || ||||||||||| Sbjct: 148 ggcggcggcgacggcgacggcgacgacgacgcg 180
>gb|AY016023.1| Sphoeroides nephelus alpha globin gene cluster, complete sequence Length = 167215 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 120 aacgccatcgcctccgtctcgcctcagct 148 |||||| ||||||||||||| |||||||| Sbjct: 105895 aacgccttcgcctccgtctcccctcagct 105867
>gb|AC105743.8| Oryza sativa chromosome 3 BAC OSJNBa0035N15 genomic sequence, complete sequence Length = 171120 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagca 320 ||||||||||||||||||||| Sbjct: 68269 gcgacggcgacggcgacagca 68289
>ref|XM_423853.1| PREDICTED: Gallus gallus similar to Homeobox protein DLX-1 (LOC426189), mRNA Length = 864 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagc 319 ||||||||||||||||||||| Sbjct: 826 ggcgacggcgacggcgacagc 806
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagcaacgacgacg 329 |||| |||||||||||||||||| ||||| Sbjct: 2667237 cgacagcgacggcgacagcaacggcgacg 2667265
>gb|BC029784.1| Mus musculus mitochondrial ribosomal protein S30, mRNA (cDNA clone MGC:36913 IMAGE:4945650), complete cds Length = 1409 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagc 319 ||||||||||||||||||||| Sbjct: 399 ggcgacggcgacggcgacagc 379
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 acgcgggcctcggcatctgcc 287 ||||||||||||||||||||| Sbjct: 1065120 acgcgggcctcggcatctgcc 1065140 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 cgggcgccgccgatgccgcc 361 |||||||||||||||||||| Sbjct: 4616436 cgggcgccgccgatgccgcc 4616455
>gb|AC093435.3| Drosophila melanogaster 3L BAC RP98-7A5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 171689 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 302 gacggcgacggcgacagcaac 322 ||||||||||||||||||||| Sbjct: 86628 gacggcgacggcgacagcaac 86608
>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065G12 Length = 165006 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagcaacg 323 |||||||||||||||||| |||||| Sbjct: 6888 ggcgacggcgacggcgacggcaacg 6912
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 337 cggatcgggcgccgccgatgccgcc 361 ||||||||| ||||||||||||||| Sbjct: 2016062 cggatcgggtgccgccgatgccgcc 2016086 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 337 cggatcgggcgccgccgatgccgcc 361 ||||||||| ||||||||||||||| Sbjct: 501364 cggatcgggtgccgccgatgccgcc 501340
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 gccgcccggatcgggcgccgc 351 ||||||||||||||||||||| Sbjct: 2636538 gccgcccggatcgggcgccgc 2636558 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 cccacgccaacggcggcgccgacc 383 |||||||| ||||||||||||||| Sbjct: 719904 cccacgccgacggcggcgccgacc 719881
>gb|M89648.1|APLCAMD12 Aplysia californica clone d12 NCAM-related adhesion molecule mRNA, complete cds Length = 2525 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagcaacg 323 ||||||||| ||||||||||||||| Sbjct: 2493 ggcgacggcaacggcgacagcaacg 2517
>gb|AY900631.1| Drosophila buzzatii clone BAC 5H14, complete sequence Length = 124024 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacg 323 |||||||||||||||||| |||||| Sbjct: 22687 ggcgacggcgacggcgacggcaacg 22663
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagcaacgacgacg 329 ||||||||||||||||||| ||| ||||| Sbjct: 19046 cgacggcgacggcgacagcgacggcgacg 19074
>emb|BX933515.1| Gallus gallus finished cDNA, clone ChEST43b7 Length = 957 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagc 319 ||||||||||||||||||||| Sbjct: 413 ggcgacggcgacggcgacagc 393
>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1033B05 Length = 138882 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagcaacgacgacg 329 ||||||||||||||||||| ||| ||||| Sbjct: 138692 cgacggcgacggcgacagcgacggcgacg 138720
>gb|BC042466.1| Homo sapiens, Similar to podocalyxin-like, clone IMAGE:5172924, mRNA Length = 6199 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 297 agggcgacggcgacggcgacagcaacgacgacg 329 |||||||||||||||||||| || ||| ||||| Sbjct: 301 agggcgacggcgacggcgacggcgacggcgacg 269 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacgacg 326 |||||||||||||||||| || |||||| Sbjct: 293 ggcgacggcgacggcgacggcgacgacg 266
>dbj|AP003313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0035F12 Length = 153439 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagcaacg 323 |||||||||||||||||| |||||| Sbjct: 80942 ggcgacggcgacggcgacggcaacg 80966
>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025D05 Length = 145684 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagcaacgacga 327 |||||||||||||||||| || ||||||| Sbjct: 122087 ggcgacggcgacggcgacggcgacgacga 122115
>dbj|AP005475.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0091L05 Length = 173983 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacgacgacgcg 331 |||| ||||||||||||| || ||||||||||| Sbjct: 4332 ggcggcggcgacggcgacggcgacgacgacgcg 4300
>dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701E06 Length = 123415 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagcaacgacgac 328 |||||||||||||||||||| ||| |||| Sbjct: 897 gcgacggcgacggcgacagcgacggcgac 925
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 356 gccgcccacgccaacggcggcgccg 380 |||||||||||| |||||||||||| Sbjct: 111585 gccgcccacgcccacggcggcgccg 111609
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacg 323 |||||||||||||||||| |||||| Sbjct: 24199 ggcgacggcgacggcgacggcaacg 24175
>dbj|AP005673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1029H08 Length = 137050 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacgacgacgcg 331 |||| ||||||||||||| || ||||||||||| Sbjct: 115071 ggcggcggcgacggcgacggcgacgacgacgcg 115039
>dbj|AP004857.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1711_D06 Length = 87613 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacg 323 |||||||||||||||||| |||||| Sbjct: 73534 ggcgacggcgacggcgacggcaacg 73510
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagca 320 ||||||||||||||||||||| Sbjct: 42204 gcgacggcgacggcgacagca 42224
>dbj|AK101656.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057F03, full insert sequence Length = 1675 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacg 323 |||||||||||||||||| |||||| Sbjct: 40 ggcgacggcgacggcgacggcaacg 16
>dbj|AK070355.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054M22, full insert sequence Length = 992 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagcaacgacgacg 329 ||||||||||||||||||| ||| ||||| Sbjct: 329 cgacggcgacggcgacagcgacggcgacg 357
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 356 gccgcccacgccaacggcggcgccg 380 |||||||||||| |||||||||||| Sbjct: 40796 gccgcccacgcccacggcggcgccg 40820
>gb|AE003550.4| Drosophila melanogaster chromosome 3L, section 35 of 83 of the complete sequence Length = 304975 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 gacggcgacggcgacagcaac 322 ||||||||||||||||||||| Sbjct: 118519 gacggcgacggcgacagcaac 118539
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 cgccaacggcggcgccgacct 384 ||||||||||||||||||||| Sbjct: 718039 cgccaacggcggcgccgacct 718059
>gb|U97519.1|HSU97519 Homo sapiens podocalyxin-like protein mRNA, complete cds Length = 5869 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 297 agggcgacggcgacggcgacagcaacgacgacg 329 |||||||||||||||||||| || ||| ||||| Sbjct: 347 agggcgacggcgacggcgacggcgacggcgacg 315 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacgacg 326 |||||||||||||||||| || |||||| Sbjct: 339 ggcgacggcgacggcgacggcgacgacg 312
>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482D04 Length = 144583 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagcaacgacgacg 329 ||||||||||||||||||| ||| ||||| Sbjct: 57083 cgacggcgacggcgacagcgacggcgacg 57111
>gb|AY644399.1| Suid herpesvirus 1 strain Yu B nonfunctional protein kinase (PK) gene, complete sequence Length = 1171 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagca 320 |||||||||||||||||||| Sbjct: 219 cgacggcgacggcgacagca 238
>gb|AY644398.1| Suid herpesvirus 1 strain Yu A nonfunctional protein kinase (PK) gene, complete sequence Length = 1157 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagca 320 |||||||||||||||||||| Sbjct: 219 cgacggcgacggcgacagca 238
>ref|XM_483723.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1252 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 180 cgatgccgcccacgccaccggcgg 203
>ref|NM_188993.1| Oryza sativa (japonica cultivar-group), mRNA Length = 987 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 462 cgatgccgcccacgccaccggcgg 439
>ref|XM_480701.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1203 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 944 cgatgccgcccacgccaccggcgg 921
>ref|XM_468580.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1071 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 654 cgatgccgcccacgccaccggcgg 631
>ref|XM_466509.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1038 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagcaacgacgac 328 |||||||||||||||| || |||||||| Sbjct: 891 cgacggcgacggcgacggcgacgacgac 918
>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05, complete sequence Length = 143400 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 acgacgacgcgccgcccggatcgg 344 |||||||||||||| ||||||||| Sbjct: 23853 acgacgacgcgccggccggatcgg 23830
>gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015F11, complete sequence Length = 177574 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 acgacgacgcgccgcccggatcgg 344 |||||||||||||| ||||||||| Sbjct: 158432 acgacgacgcgccggccggatcgg 158409
>gb|AC136150.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0023F12, complete sequence Length = 147801 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 cggcgacggcgacagcaacgacga 327 ||||||| |||||||||||||||| Sbjct: 36824 cggcgactgcgacagcaacgacga 36847
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gggcgacggcgacggcgaca 317 |||||||||||||||||||| Sbjct: 71552 gggcgacggcgacggcgaca 71533
>gb|AC148393.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0044A08 map near S6115, complete sequence Length = 158583 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gcgccgccgatgccgcccac 364 |||||||||||||||||||| Sbjct: 80261 gcgccgccgatgccgcccac 80242
>gb|AC146546.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062M03 map near S6115, complete sequence Length = 138223 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 caagggcgacggcgacggcg 314 |||||||||||||||||||| Sbjct: 39648 caagggcgacggcgacggcg 39667
>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0007B15 map S10318, complete sequence Length = 125243 Score = 40.1 bits (20), Expect = 7.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 300 gcgacggcgacggcgacagcaacgacgacgcg 331 ||||||||||||||||| || ||||||||||| Sbjct: 17979 gcgacggcgacggcgac-gcgacgacgacgcg 17949
>gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0071K19, complete sequence Length = 174752 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagc 319 |||||||||||||||||||| Sbjct: 13008 gcgacggcgacggcgacagc 13027
>gb|AC131966.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0028C16, complete sequence Length = 151030 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ccatggctgccggcgacgag 220 |||||||||||||||||||| Sbjct: 87329 ccatggctgccggcgacgag 87310
>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02, complete sequence Length = 131860 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 agggcgacggcgacggcgac 316 |||||||||||||||||||| Sbjct: 9040 agggcgacggcgacggcgac 9021
>gb|AC113334.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_F01, complete sequence Length = 118799 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacgacg 326 |||| ||||||||||||| ||||||||| Sbjct: 99831 ggcggcggcgacggcgacggcaacgacg 99804
>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0008H02, complete sequence Length = 143438 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 cggcgacggcgacagcaacgacga 327 ||||||| |||||||||||||||| Sbjct: 137359 cggcgactgcgacagcaacgacga 137382
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cgccatcgcctccgtctcgc 141 |||||||||||||||||||| Sbjct: 2290999 cgccatcgcctccgtctcgc 2290980
>gb|AC135920.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0015G13, complete sequence Length = 143966 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagcaacg 323 ||||||||||||||||| |||||| Sbjct: 128006 gcgacggcgacggcgacggcaacg 128029
>ref|XM_365297.1| Magnaporthe grisea 70-15 predicted protein (MG01999.4) partial mRNA Length = 1056 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 agggcgacggcgacggcgac 316 |||||||||||||||||||| Sbjct: 442 agggcgacggcgacggcgac 461
>ref|XM_367828.1| Magnaporthe grisea 70-15 chromosome III predicted protein (MG07732.4) partial mRNA Length = 1725 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cggcgacggcgacagcaacg 323 |||||||||||||||||||| Sbjct: 671 cggcgacggcgacagcaacg 690
>gb|AC137616.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0069I13, complete sequence Length = 94252 Score = 40.1 bits (20), Expect = 7.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagc-aacgacgacg 329 |||||||||||||||||| || |||||||||| Sbjct: 26518 ggcgacggcgacggcgacggcgaacgacgacg 26487
>gb|DQ490965.1| Mutant Zea mays clone pGR25C22 disrupted DOF1 (Dof1) gene, promoter region and complete cds Length = 12502 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacag 318 |||||||||||||||||||| Sbjct: 3808 ggcgacggcgacggcgacag 3789
>gb|AY657626.1| Synthetic construct Peudomonas aeruginosa clone FLH041247.01F PA0389 gene, partial cds Length = 621 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ccttccaggacttcgagcgc 259 |||||||||||||||||||| Sbjct: 443 ccttccaggacttcgagcgc 462
>gb|AC108502.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1378_A04, complete sequence Length = 103458 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 45852 cgatgccgcccacgccaccggcgg 45829
>ref|XM_958305.1| Neurospora crassa OR74A hypothetical protein (NCU08428.1) partial mRNA Length = 1338 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacag 318 |||||||||||||||||||| Sbjct: 525 ggcgacggcgacggcgacag 506
>gb|AC105769.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1301_G07, complete sequence Length = 106166 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 9339 cgatgccgcccacgccaccggcgg 9316
>ref|XM_329473.1| Neurospora crassa OR74A hypothetical protein (NCU08428.1) partial mRNA Length = 1338 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacag 318 |||||||||||||||||||| Sbjct: 525 ggcgacggcgacggcgacag 506
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 gcccggatcgggcgccgccg 353 |||||||||||||||||||| Sbjct: 2275155 gcccggatcgggcgccgccg 2275174 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 298 gggcgacggcgacggcgacagcaacgacgacg 329 ||||||||||||||||||| || ||| ||||| Sbjct: 1335941 gggcgacggcgacggcgacggcgacggcgacg 1335972
>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0013J02, complete sequence Length = 118026 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacgacg 326 |||| ||||||||||||| ||||||||| Sbjct: 4733 ggcggcggcgacggcgacggcaacgacg 4706
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gggcgacggcgacggcgaca 317 |||||||||||||||||||| Sbjct: 14133 gggcgacggcgacggcgaca 14114
>gb|AC146651.10| Medicago truncatula clone mth2-113d3, complete sequence Length = 157296 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 524 agggatatcattcgtgggagtcca 547 |||||||||||||| ||||||||| Sbjct: 48961 agggatatcattcgcgggagtcca 48938
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagc 319 |||||||||||||||||||| Sbjct: 247950 gcgacggcgacggcgacagc 247969
>emb|Z86113.1|SLAMLC S.lividans amlC gene Length = 3480 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacag 318 |||||||||||||||||||| Sbjct: 451 ggcgacggcgacggcgacag 432
>emb|X94193.1|PGHSP179 P.glaucum mRNA for heat shock protein, HSP 17.9 Length = 807 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 gcgtccctgcgtgctgcgtg 183 |||||||||||||||||||| Sbjct: 708 gcgtccctgcgtgctgcgtg 727
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 gcgccgcccggatcgggcgc 348 |||||||||||||||||||| Sbjct: 3455442 gcgccgcccggatcgggcgc 3455461
>emb|BX284762.1|NCB13B3 Neurospora crassa DNA linkage group II BAC contig B13B3 Length = 82584 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacag 318 |||||||||||||||||||| Sbjct: 66030 ggcgacggcgacggcgacag 66011
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 caagggcgacggcgacggcg 314 |||||||||||||||||||| Sbjct: 140575 caagggcgacggcgacggcg 140594 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 caagggcgacggcgacggcg 314 |||||||||||||||||||| Sbjct: 137519 caagggcgacggcgacggcg 137538
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 298 gggcgacggcgacggcgacagcaa 321 ||||||||||||||||||| |||| Sbjct: 61328 gggcgacggcgacggcgacggcaa 61351
>emb|AL663016.5|OSJN00216 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0076A22, complete sequence Length = 131489 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 95249 cgatgccgcccacgccaccggcgg 95226
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14, complete sequence Length = 132560 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagcaacgacg 326 |||||||||||||||||| || |||||| Sbjct: 66055 ggcgacggcgacggcgacggcgacgacg 66082
>gb|AF286640.1| Pinus taeda clone PtTX4016 microsatellite sequence Length = 543 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacag 318 |||||||||||||||||||| Sbjct: 174 ggcgacggcgacggcgacag 155
>gb|AC099400.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096E22, complete sequence Length = 133846 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagc 319 |||||||||||||||||||| Sbjct: 97613 gcgacggcgacggcgacagc 97632
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 35464 cgatgccgcccacgccaccggcgg 35487
>gb|AC091733.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048F08, from chromosome 3, complete sequence Length = 155790 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 368 aacggcggcgccgacctctccgtc 391 ||||| |||||||||||||||||| Sbjct: 103650 aacggtggcgccgacctctccgtc 103673
>gb|AC008512.8| Homo sapiens chromosome 5 clone CTC-454K8, complete sequence Length = 110931 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 atctgcagaaacacgcaact 506 |||||||||||||||||||| Sbjct: 103605 atctgcagaaacacgcaact 103624
>gb|AC026409.4| Homo sapiens chromosome 5 clone CTC-437M9, complete sequence Length = 163384 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 atctgcagaaacacgcaact 506 |||||||||||||||||||| Sbjct: 75675 atctgcagaaacacgcaact 75656
>gb|AC021080.4|AC021080 Homo sapiens chromosome 5 clone CTC-203K17, complete sequence Length = 103522 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 atctgcagaaacacgcaact 506 |||||||||||||||||||| Sbjct: 87934 atctgcagaaacacgcaact 87953
>gb|AC092186.1|AC092186 Drosophila melanogaster, chromosome 2L, region 22D-22E, BAC clone BACR22P10, complete sequence Length = 184650 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 gggcgacggcgacggcgaca 317 |||||||||||||||||||| Sbjct: 149809 gggcgacggcgacggcgaca 149828
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagca 320 |||||||||||||||||||| Sbjct: 118397 cgacggcgacggcgacagca 118416
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 gcccggatcgggcgccgccg 353 |||||||||||||||||||| Sbjct: 1551866 gcccggatcgggcgccgccg 1551847
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 18132365 cgatgccgcccacgccaccggcgg 18132342 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagc 319 |||||||||||||||||||| Sbjct: 2902320 gcgacggcgacggcgacagc 2902339
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagcaacgacg 326 |||||||||||||||||| || |||||| Sbjct: 20178275 ggcgacggcgacggcgacggcgacgacg 20178302 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 agggcgacggcgacggcgac 316 |||||||||||||||||||| Sbjct: 14028357 agggcgacggcgacggcgac 14028338 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 7261476 cgatgccgcccacgccaccggcgg 7261453
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ccatggctgccggcgacgag 220 |||||||||||||||||||| Sbjct: 3224454 ccatggctgccggcgacgag 3224435 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 2854432 cgatgccgcccacgccaccggcgg 2854455 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagc 319 |||||||||||||||||||| Sbjct: 247950 gcgacggcgacggcgacagc 247969
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 27770925 cgatgccgcccacgccaccggcgg 27770948 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 304 cggcgacggcgacagcaacgacgacgcg 331 |||||||||||||| | ||||||||||| Sbjct: 26559141 cggcgacggcgacaccgacgacgacgcg 26559114 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 25569271 cgatgccgcccacgccaccggcgg 25569294 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gcgacggcgacggcgacagc 319 |||||||||||||||||||| Sbjct: 18306914 gcgacggcgacggcgacagc 18306895 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 7431735 cgatgccgcccacgccaccggcgg 7431758 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 7424129 cgatgccgcccacgccaccggcgg 7424152 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 7016354 cgatgccgcccacgccaccggcgg 7016331
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacgacg 326 |||| ||||||||||||| ||||||||| Sbjct: 24817848 ggcggcggcgacggcgacggcaacgacg 24817821 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 agggcgacggcgacggcgac 316 |||||||||||||||||||| Sbjct: 22307405 agggcgacggcgacggcgac 22307386 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 21030474 cgatgccgcccacgccaccggcgg 21030451 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gggcgacggcgacggcgaca 317 |||||||||||||||||||| Sbjct: 20758328 gggcgacggcgacggcgaca 20758309 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 acgacgacgcgccgcccggatcgg 344 |||||||||||||| ||||||||| Sbjct: 16072683 acgacgacgcgccggccggatcgg 16072660 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagcaacg 323 ||||||||||||||||| |||||| Sbjct: 6426267 gcgacggcgacggcgacggcaacg 6426290 Score = 40.1 bits (20), Expect = 7.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagc-aacgacgacg 329 |||||||||||||||||| || |||||||||| Sbjct: 2157289 ggcgacggcgacggcgacggcgaacgacgacg 2157258
>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12, complete sequence Length = 195583 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 166728 cgatgccgcccacgccaccggcgg 166705
>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702H08 Length = 166899 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cgacggcgacggcgacagca 320 |||||||||||||||||||| Sbjct: 117262 cgacggcgacggcgacagca 117243
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1100D10 Length = 152997 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 61407 cgatgccgcccacgccaccggcgg 61430 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 40779 cgatgccgcccacgccaccggcgg 40802
>gb|AE004476.1| Pseudomonas aeruginosa PAO1, section 37 of 529 of the complete genome Length = 11930 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ccttccaggacttcgagcgc 259 |||||||||||||||||||| Sbjct: 5618 ccttccaggacttcgagcgc 5599
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 agggcgacggcgacggcgac 316 |||||||||||||||||||| Sbjct: 1991691 agggcgacggcgacggcgac 1991672
>gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1126B12, complete sequence Length = 146241 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 45427 cgatgccgcccacgccaccggcgg 45450
>dbj|AP005768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0039C01 Length = 151054 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagca 320 |||||||||||||||||||| Sbjct: 14598 cgacggcgacggcgacagca 14617
>dbj|AP005451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0443H10 Length = 144695 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gcgacggcgacggcgacagc 319 |||||||||||||||||||| Sbjct: 57727 gcgacggcgacggcgacagc 57708
>dbj|AP004044.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1125_C01 Length = 123849 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 103847 cgatgccgcccacgccaccggcgg 103870
>dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_D09 Length = 138615 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagcaacgacgac 328 |||||||||||||||| || |||||||| Sbjct: 12118 cgacggcgacggcgacggcgacgacgac 12145
>dbj|AP005480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0439B07 Length = 89475 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 25382 cgatgccgcccacgccaccggcgg 25405
>dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1067_B01 Length = 100525 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagcaacgacgac 328 |||||||||||||||| || |||||||| Sbjct: 69477 cgacggcgacggcgacggcgacgacgac 69504
>dbj|AP006235.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017N10 Length = 168535 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagc 319 |||||||||||||||||||| Sbjct: 152412 gcgacggcgacggcgacagc 152431
>dbj|AP005914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0027A16 Length = 129953 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cgacggcgacggcgacagca 320 |||||||||||||||||||| Sbjct: 73708 cgacggcgacggcgacagca 73689
>dbj|AP005876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0092O08 Length = 145596 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagc 319 |||||||||||||||||||| Sbjct: 54874 gcgacggcgacggcgacagc 54893
>dbj|AP004804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0680B05 Length = 138741 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cgacggcgacggcgacagca 320 |||||||||||||||||||| Sbjct: 5314 cgacggcgacggcgacagca 5295
>dbj|AP004811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0019A05 Length = 144255 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 99381 cgatgccgcccacgccaccggcgg 99358
>dbj|AP005255.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0087F05 Length = 143908 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagca 320 |||||||||||||||||||| Sbjct: 69697 cgacggcgacggcgacagca 69716
>dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0026I22 Length = 143302 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gcgacggcgacggcgacagc 319 |||||||||||||||||||| Sbjct: 125958 gcgacggcgacggcgacagc 125939
>dbj|AP006615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1165C09 Length = 202985 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 134402 cgatgccgcccacgccaccggcgg 134379
>dbj|AP003877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_E09 Length = 100932 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 41775 cgatgccgcccacgccaccggcgg 41798 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 34169 cgatgccgcccacgccaccggcgg 34192
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702E04 Length = 190948 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 304 cggcgacggcgacagcaacgacgacgcg 331 |||||||||||||| | ||||||||||| Sbjct: 108008 cggcgacggcgacaccgacgacgacgcg 107981
>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686C03 Length = 164529 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 55962 cgatgccgcccacgccaccggcgg 55985
>dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0434E03 Length = 142414 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gcgacggcgacggcgacagc 319 |||||||||||||||||||| Sbjct: 129226 gcgacggcgacggcgacagc 129207
>dbj|AP005933.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0674B07 Length = 192191 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 61840 cgatgccgcccacgccaccggcgg 61817
>dbj|AK110261.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-B04, full insert sequence Length = 1066 Score = 40.1 bits (20), Expect = 7.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagc-aacgacgacg 329 |||||||||||||||||| || |||||||||| Sbjct: 129 ggcgacggcgacggcgacggcgaacgacgacg 98
>dbj|AK108383.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-E09, full insert sequence Length = 1252 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 180 cgatgccgcccacgccaccggcgg 203
>dbj|AK101475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040N15, full insert sequence Length = 1026 Score = 40.1 bits (20), Expect = 7.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagc-aacgacgacg 329 |||||||||||||||||| || |||||||||| Sbjct: 131 ggcgacggcgacggcgacggcgaacgacgacg 100
>dbj|AK072388.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079B04, full insert sequence Length = 2152 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacgacg 326 |||||||||||||||||| || |||||| Sbjct: 223 ggcgacggcgacggcgacggcgacgacg 196
>dbj|AK071002.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078P05, full insert sequence Length = 850 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacgacg 326 |||||||||||||||||| || |||||| Sbjct: 240 ggcgacggcgacggcgacggcgacgacg 213
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cgacggcgacggcgacagca 320 |||||||||||||||||||| Sbjct: 2280642 cgacggcgacggcgacagca 2280623
>dbj|AP005160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0031C24 Length = 194111 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagc 319 |||||||||||||||||||| Sbjct: 89657 gcgacggcgacggcgacagc 89676 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacag 318 |||||||||||||||||||| Sbjct: 89547 ggcgacggcgacggcgacag 89566
>gb|AY108655.1| Zea mays PCO136147 mRNA sequence Length = 1310 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacag 318 |||||||||||||||||||| Sbjct: 115 ggcgacggcgacggcgacag 96
>gb|AE003583.3| Drosophila melanogaster chromosome 2L, section 8 of 83 of the complete sequence Length = 303641 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 gggcgacggcgacggcgaca 317 |||||||||||||||||||| Sbjct: 160018 gggcgacggcgacggcgaca 160037
>gb|AC103664.12| Mus musculus chromosome 7, clone RP23-348F4, complete sequence Length = 222413 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcttgtttgtttattcacaa 110 |||||||||||||||||||| Sbjct: 157445 tcttgtttgtttattcacaa 157464
>gb|AF059582.1|AF059582 Verticillium lecanii cuticle-degrading serine protease precursor (pr1) gene, partial cds Length = 1057 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ggcgacagcaacgacgacgc 330 |||||||||||||||||||| Sbjct: 958 ggcgacagcaacgacgacgc 977
>gb|AC156998.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0086B08, complete sequence Length = 148274 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 299 ggcgacggcgacggcgacagcaacgacg 326 |||| ||||||||||||| ||||||||| Sbjct: 144347 ggcggcggcgacggcgacggcaacgacg 144320
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 cgccatggctgccggcgacg 218 |||||||||||||||||||| Sbjct: 1328836 cgccatggctgccggcgacg 1328855
>gb|AF005275.1|AF005275 Azospirillum brasilense ammonium transporter AmtB (amtB) gene, complete cds Length = 1943 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ggcgccgccgatgccgcccacgcc 367 ||||||| |||||||||||||||| Sbjct: 1428 ggcgccgacgatgccgcccacgcc 1405
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ccatggctgccggcgacgag 220 |||||||||||||||||||| Sbjct: 3224375 ccatggctgccggcgacgag 3224356 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 2854383 cgatgccgcccacgccaccggcgg 2854406 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagc 319 |||||||||||||||||||| Sbjct: 247947 gcgacggcgacggcgacagc 247966
>gb|AC004246.1|AC004246 Drosophila melanogaster DNA sequence (P1 DS00564 (D140)), complete sequence Length = 50279 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gggcgacggcgacggcgaca 317 |||||||||||||||||||| Sbjct: 32252 gggcgacggcgacggcgaca 32233
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagcaacgacg 326 |||||||||||||||||| || |||||| Sbjct: 20104489 ggcgacggcgacggcgacggcgacgacg 20104516 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 agggcgacggcgacggcgac 316 |||||||||||||||||||| Sbjct: 13982637 agggcgacggcgacggcgac 13982618 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 7261355 cgatgccgcccacgccaccggcgg 7261332
>emb|AL663004.3|OSJN00207 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0049I21, complete sequence Length = 141935 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gcgacggcgacggcgacagc 319 |||||||||||||||||||| Sbjct: 34206 gcgacggcgacggcgacagc 34225
>emb|AL732536.5|CNS08C9B Oryza sativa chromosome 12, . BAC OJ1111_F12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 115351 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 agggcgacggcgacggcgac 316 |||||||||||||||||||| Sbjct: 57033 agggcgacggcgacggcgac 57014
>emb|AL831806.5|CNS08CAJ Oryza sativa chromosome 12, . BAC OSJNBb0106P21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141427 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgatgccgcccacgccaacggcgg 375 ||||||||||||||||| |||||| Sbjct: 117789 cgatgccgcccacgccaccggcgg 117766
>emb|AL713944.3|CNS07YPN Oryza sativa chromosome 12, . BAC OJ1116_G12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152862 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacagcaacgacg 326 |||||||||||||||||| || |||||| Sbjct: 42509 ggcgacggcgacggcgacggcgacgacg 42536
>gb|L13454.1|MZEPLBH Zea mays Pl-Bh (Blotched1) gene, complete cds Length = 3587 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacag 318 |||||||||||||||||||| Sbjct: 3525 ggcgacggcgacggcgacag 3544
>dbj|D00676.1|SH1RSP40 Suid herpesvirus 1 (strain KA) gene for ORF for RSp40, protein kinase, glycoprotein X, partial and complete cds Length = 4008 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgacggcgacggcgacagca 320 |||||||||||||||||||| Sbjct: 2988 cgacggcgacggcgacagca 3007
>gb|L19494.1|MZEPLTANSA Zea mays PL transcriptional activator gene, complete cds Length = 4439 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ggcgacggcgacggcgacag 318 |||||||||||||||||||| Sbjct: 2928 ggcgacggcgacggcgacag 2947
>dbj|AP001033.6| Homo sapiens genomic DNA, chromosome 18p clone:RP11-888D10, complete sequences Length = 200891 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcttgtttgtttattcacaa 110 |||||||||||||||||||| Sbjct: 136859 tcttgtttgtttattcacaa 136878 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,360,626 Number of Sequences: 3902068 Number of extensions: 4360626 Number of successful extensions: 110853 Number of sequences better than 10.0: 203 Number of HSP's better than 10.0 without gapping: 234 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 102334 Number of HSP's gapped (non-prelim): 8469 length of query: 558 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 535 effective length of database: 17,143,297,704 effective search space: 9171664271640 effective search space used: 9171664271640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
