ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart54b02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_192249.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1491 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 413 gagcccttcgaccggttcctggctgaccaccgcatcgacgccgtcgtgtccgacagcttc 472 ||||| |||||||||||| |||| || |||| || ||||||||||||| |||||||||| Sbjct: 334 gagccgttcgaccggttcttggccgagcaccacaccgacgccgtcgtggtcgacagcttc 393 Query: 473 ttcgactggtctgccgacgccgccgcggagcgcggcgtcccgcgcatcgcgtttctgggc 532 ||| ||||||| | |||||||||||||| | ||| ||||||||| | ||||| || ||| Sbjct: 394 ttccactggtcctcggacgccgccgcggaccacggtgtcccgcgcctggcgttcctcggc 453 Query: 533 agcagcatgttcgcgcgctcctgcagcgacagcatgctgcgccacaacccgctggagaac 592 |||||| |||||||||| |||||||||||||||||||||||||||||||| ||||| | Sbjct: 454 agcagcctgttcgcgcgggcctgcagcgacagcatgctgcgccacaacccggtggaggcc 513 Query: 593 gcccccgacgaccccgacgccctcgt 618 |||||||||||||||||||| |||| Sbjct: 514 tcccccgacgaccccgacgccgtcgt 539 Score = 165 bits (83), Expect = 2e-37 Identities = 203/243 (83%) Strand = Plus / Plus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 ||||| |||||||||||||||||||||| | || |||||||||||||||| | |||| Sbjct: 26 agccgttgcacatcctcttcttcccgtttatcgcgcacggccacctcatcccggtggccg 85 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 ||||||||||||| ||||||| ||||||||| ||||| |||||||||||||| ||||||| Sbjct: 86 acatggccgcgcttttcgccgcccgcggcgttcggtgtaccatcctcaccacccccgtca 145 Query: 225 acgccgccatcatccgctccgcagtccaccgcgccaacgactccttcgccggcaccggct 284 |||||||| ||||||| || || || |||| |||||||| ||| | |||||||||| Sbjct: 146 acgccgccgtcatccgttcagccgtggaccgtgccaacgatgcctcccgtggcaccggct 205 Query: 285 ccccggccatcgacatcgccgtcgtgcccttccccgacgtcgggctccctccaggcgtgg 344 | |||| ||| |||| | || | ||||||||||||||||||||||| || ||||| | Sbjct: 206 caccggagatcagcatcacgctcttccccttccccgacgtcgggctcccgccgggcgtcg 265 Query: 345 aga 347 ||| Sbjct: 266 aga 268
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 413 gagcccttcgaccggttcctggctgaccaccgcatcgacgccgtcgtgtccgacagcttc 472 ||||| |||||||||||| |||| || |||| || ||||||||||||| |||||||||| Sbjct: 25609904 gagccgttcgaccggttcttggccgagcaccacaccgacgccgtcgtggtcgacagcttc 25609963 Query: 473 ttcgactggtctgccgacgccgccgcggagcgcggcgtcccgcgcatcgcgtttctgggc 532 ||| ||||||| | |||||||||||||| | ||| ||||||||| | ||||| || ||| Sbjct: 25609964 ttccactggtcctcggacgccgccgcggaccacggtgtcccgcgcctggcgttcctcggc 25610023 Query: 533 agcagcatgttcgcgcgctcctgcagcgacagcatgctgcgccacaacccgctggagaac 592 |||||| |||||||||| |||||||||||||||||||||||||||||||| ||||| | Sbjct: 25610024 agcagcctgttcgcgcgggcctgcagcgacagcatgctgcgccacaacccggtggaggcc 25610083 Query: 593 gcccccgacgaccccgacgccctcgt 618 |||||||||||||||||||| |||| Sbjct: 25610084 tcccccgacgaccccgacgccgtcgt 25610109 Score = 168 bits (85), Expect = 1e-38 Identities = 142/161 (88%) Strand = Plus / Plus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 |||| ||||||||||||||| |||||||||| | |||||||||||||||||||||||| Sbjct: 23452288 agccactgcacatcctcttcctcccgttcctcgtgcccggccacctcatcccgatcgccg 23452347 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 ||||||||||||||||||| | ||||||||| ||||||||||||||||||| ||||||| Sbjct: 23452348 acatggccgcgctcttcgcggcacgcggcgtcaggtgcaccatcctcaccacccccgtca 23452407 Query: 225 acgccgccatcatccgctccgcagtccaccgcgccaacgac 265 | |||||| || ||||| | || || |||||||||||||| Sbjct: 23452408 atgccgccgtcgtccgccctgccgtggaccgcgccaacgac 23452448 Score = 165 bits (83), Expect = 2e-37 Identities = 203/243 (83%) Strand = Plus / Plus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 ||||| |||||||||||||||||||||| | || |||||||||||||||| | |||| Sbjct: 25609596 agccgttgcacatcctcttcttcccgtttatcgcgcacggccacctcatcccggtggccg 25609655 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 ||||||||||||| ||||||| ||||||||| ||||| |||||||||||||| ||||||| Sbjct: 25609656 acatggccgcgcttttcgccgcccgcggcgttcggtgtaccatcctcaccacccccgtca 25609715 Query: 225 acgccgccatcatccgctccgcagtccaccgcgccaacgactccttcgccggcaccggct 284 |||||||| ||||||| || || || |||| |||||||| ||| | |||||||||| Sbjct: 25609716 acgccgccgtcatccgttcagccgtggaccgtgccaacgatgcctcccgtggcaccggct 25609775 Query: 285 ccccggccatcgacatcgccgtcgtgcccttccccgacgtcgggctccctccaggcgtgg 344 | |||| ||| |||| | || | ||||||||||||||||||||||| || ||||| | Sbjct: 25609776 caccggagatcagcatcacgctcttccccttccccgacgtcgggctcccgccgggcgtcg 25609835 Query: 345 aga 347 ||| Sbjct: 25609836 aga 25609838 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Plus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 |||| ||||||||||||||| |||||||||| | |||||||||||||||||||||||| Sbjct: 23459869 agccactgcacatcctcttcctcccgttcctcgtgcccggccacctcatcccgatcgccg 23459928 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 ||||||||||||||||||| | ||||||||| ||||||||||||||||||| ||||||| Sbjct: 23459929 acatggccgcgctcttcgcggcacgcggcgtcaggtgcaccatcctcaccacccccgtca 23459988 Query: 225 acgc 228 |||| Sbjct: 23459989 acgc 23459992 Score = 151 bits (76), Expect = 3e-33 Identities = 239/291 (82%), Gaps = 3/291 (1%) Strand = Plus / Plus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 |||| |||||||||||||||||||| ||||| || |||| || |||||||||||||||| Sbjct: 25592277 agccactgcacatcctcttcttcccattcctcgcgcccggtcatctcatcccgatcgccg 25592336 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 | |||||||| || ||||||| || |||||| ||||||||||||||||||| || |||| Sbjct: 25592337 atatggccgctctgttcgccgctcgtggcgtcaggtgcaccatcctcaccacccctgtca 25592396 Query: 225 acgccgccatcatccgctccgcagtccaccgcgccaacgactcctt-cgccg--gcaccg 281 |||||||| | |||||||| || || |||| ||||||||||| || || || || || Sbjct: 25592397 acgccgccgtgatccgctcggccgtggaccgtgccaacgactcgttccgtcgcaacaacg 25592456 Query: 282 gctccccggccatcgacatcgccgtcgtgcccttccccgacgtcgggctccctccaggcg 341 || || ||| ||||| || |||||||||| || || ||||| |||||||| || ||| Sbjct: 25592457 gcggcctggcgatcgaactcaccgtcgtgccatttccggacgttgggctcccgccgggct 25592516 Query: 342 tggagaacggcacggccctcgcgtcccaggacgaccgcgacaagttcttcc 392 | |||| |||||||| || || ||||||||||||| ||||||||||||| Sbjct: 25592517 tcgagagtggcacggcgcttacgacccaggacgaccgtgacaagttcttcc 25592567 Score = 149 bits (75), Expect = 1e-32 Identities = 246/303 (81%) Strand = Plus / Plus Query: 287 ccggccatcgacatcgccgtcgtgcccttccccgacgtcgggctccctccaggcgtggag 346 ||||| |||||||||||||||||||| ||||| |||||||||||||| || ||||| ||| Sbjct: 23452479 ccggcgatcgacatcgccgtcgtgccattcccggacgtcgggctcccgccgggcgtcgag 23452538 Query: 347 aacggcacggccctcgcgtcccaggacgaccgcgacaagttcttccgcgcggcccagctg 406 | ||||||||| || || ||| |||| ||||| | ||||||| ||| || ||||| | Sbjct: 23452539 agcggcacggcgcttgcttccgaggaggaccgtggcaagttcgtccatgccatccagcgg 23452598 Query: 407 ctccgggagcccttcgaccggttcctggctgaccaccgcatcgacgccgtcgtgtccgac 466 || || ||||| |||||||||||| |||| || |||| | ||||||||||||| ||||| Sbjct: 23452599 ctgcgcgagccgttcgaccggttcatggcggagcaccaccccgacgccgtcgtggccgac 23452658 Query: 467 agcttcttcgactggtctgccgacgccgccgcggagcgcggcgtcccgcgcatcgcgttt 526 |||||||| ||||| | ||||||||||| |||| |||||||||||| | | ||| Sbjct: 23452659 ggcttcttcacttggtccgtggacgccgccgccgagcacggcgtcccgcggctggtgttc 23452718 Query: 527 ctgggcagcagcatgttcgcgcgctcctgcagcgacagcatgctgcgccacaacccgctg 586 || |||| | || |||||||||| || ||| || |||||| |||||||||||||| || Sbjct: 23452719 ctcggcaccggcgtgttcgcgcggtcatgccaggagagcatggtgcgccacaacccggtg 23452778 Query: 587 gag 589 ||| Sbjct: 23452779 gag 23452781 Score = 143 bits (72), Expect = 8e-31 Identities = 180/216 (83%) Strand = Plus / Plus Query: 403 gctgctccgggagcccttcgaccggttcctggctgaccaccgcatcgacgccgtcgtgtc 462 |||||||| |||||||||||||||| |||| | || |||| | ||||||||| |||| Sbjct: 25592578 gctgctccatgagcccttcgaccggtacctgtcggagcaccacgtcgacgccgccgtggt 25592637 Query: 463 cgacagcttcttcgactggtctgccgacgccgccgcggagcgcggcgtcccgcgcatcgc 522 |||||||||||| ||| | || ||||||||||| |||| |||||||||||| | | Sbjct: 25592638 ggacagcttcttcaggtgggccgcggacgccgccgccgagcacggcgtcccgcggctggg 25592697 Query: 523 gtttctgggcagcagcatgttcgcgcgctcctgcagcgacagcatgctgcgccacaaccc 582 ||| || |||| |||| |||||||| | |||||| | |||||||||||||| ||||||| Sbjct: 25592698 gttcctcggcaccagcgtgttcgcgagggcctgcaccaacagcatgctgcgcaacaaccc 25592757 Query: 583 gctggagaacgcccccgacgaccccgacgccctcgt 618 |||||||| |||||||||||||||||||||| |||| Sbjct: 25592758 gctggagaccgcccccgacgaccccgacgccgtcgt 25592793 Score = 133 bits (67), Expect = 8e-28 Identities = 235/291 (80%) Strand = Plus / Plus Query: 293 atcgacatcgccgtcgtgcccttccccgacgtcgggctccctccaggcgtggagaacggc 352 |||||||||||||||||||| || || |||||||||||||| || ||||| ||||||||| Sbjct: 23460069 atcgacatcgccgtcgtgccatttccggacgtcgggctcccgccgggcgtcgagaacggc 23460128 Query: 353 acggccctcgcgtcccaggacgaccgcgacaagttcttccgcgcggcccagctgctccgg 412 |||| || | ||| |||||||| || |||||||| ||| || || ||| || Sbjct: 23460129 gcggcgcttacttccgaggacgacgttcgcaggttcttccacgccatccggcggctgcgc 23460188 Query: 413 gagcccttcgaccggttcctggctgaccaccgcatcgacgccgtcgtgtccgacagcttc 472 ||||| |||||||||||| |||| || |||||| ||||||||||||||||||| ||||| Sbjct: 23460189 gagccgttcgaccggttcatggcggagcaccgccccgacgccgtcgtgtccgacggcttc 23460248 Query: 473 ttcgactggtctgccgacgccgccgcggagcgcggcgtcccgcgcatcgcgtttctgggc 532 ||| ||||| || ||||||||||| | || |||||||||||| | | ||| || ||| Sbjct: 23460249 ttcacttggtccgcggacgccgccgccgcgcacggcgtcccgcggctggtgttcctcggc 23460308 Query: 533 agcagcatgttcgcgcgctcctgcagcgacagcatgctgcgccacaacccg 583 | |||| |||||||||| | |||| ||| | |||| |||||||||||||| Sbjct: 23460309 accagcgtgttcgcgcggttgtgcaacgagatcatggtgcgccacaacccg 23460359 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 487 cgacgccgccgcggagcgcggcgtcccg 514 ||||||||||||||||| |||||||||| Sbjct: 30684320 cgacgccgccgcggagctcggcgtcccg 30684293 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 210 tcaccacgcccgtcaacgccgc 231 |||||||||||||||||||||| Sbjct: 3915162 tcaccacgcccgtcaacgccgc 3915141
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004A09 Length = 158826 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 413 gagcccttcgaccggttcctggctgaccaccgcatcgacgccgtcgtgtccgacagcttc 472 ||||| |||||||||||| |||| || |||| || ||||||||||||| |||||||||| Sbjct: 56710 gagccgttcgaccggttcttggccgagcaccacaccgacgccgtcgtggtcgacagcttc 56769 Query: 473 ttcgactggtctgccgacgccgccgcggagcgcggcgtcccgcgcatcgcgtttctgggc 532 ||| ||||||| | |||||||||||||| | ||| ||||||||| | ||||| || ||| Sbjct: 56770 ttccactggtcctcggacgccgccgcggaccacggtgtcccgcgcctggcgttcctcggc 56829 Query: 533 agcagcatgttcgcgcgctcctgcagcgacagcatgctgcgccacaacccgctggagaac 592 |||||| |||||||||| |||||||||||||||||||||||||||||||| ||||| | Sbjct: 56830 agcagcctgttcgcgcgggcctgcagcgacagcatgctgcgccacaacccggtggaggcc 56889 Query: 593 gcccccgacgaccccgacgccctcgt 618 |||||||||||||||||||| |||| Sbjct: 56890 tcccccgacgaccccgacgccgtcgt 56915 Score = 165 bits (83), Expect = 2e-37 Identities = 203/243 (83%) Strand = Plus / Plus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 ||||| |||||||||||||||||||||| | || |||||||||||||||| | |||| Sbjct: 56402 agccgttgcacatcctcttcttcccgtttatcgcgcacggccacctcatcccggtggccg 56461 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 ||||||||||||| ||||||| ||||||||| ||||| |||||||||||||| ||||||| Sbjct: 56462 acatggccgcgcttttcgccgcccgcggcgttcggtgtaccatcctcaccacccccgtca 56521 Query: 225 acgccgccatcatccgctccgcagtccaccgcgccaacgactccttcgccggcaccggct 284 |||||||| ||||||| || || || |||| |||||||| ||| | |||||||||| Sbjct: 56522 acgccgccgtcatccgttcagccgtggaccgtgccaacgatgcctcccgtggcaccggct 56581 Query: 285 ccccggccatcgacatcgccgtcgtgcccttccccgacgtcgggctccctccaggcgtgg 344 | |||| ||| |||| | || | ||||||||||||||||||||||| || ||||| | Sbjct: 56582 caccggagatcagcatcacgctcttccccttccccgacgtcgggctcccgccgggcgtcg 56641 Query: 345 aga 347 ||| Sbjct: 56642 aga 56644 Score = 151 bits (76), Expect = 3e-33 Identities = 239/291 (82%), Gaps = 3/291 (1%) Strand = Plus / Plus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 |||| |||||||||||||||||||| ||||| || |||| || |||||||||||||||| Sbjct: 39083 agccactgcacatcctcttcttcccattcctcgcgcccggtcatctcatcccgatcgccg 39142 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 | |||||||| || ||||||| || |||||| ||||||||||||||||||| || |||| Sbjct: 39143 atatggccgctctgttcgccgctcgtggcgtcaggtgcaccatcctcaccacccctgtca 39202 Query: 225 acgccgccatcatccgctccgcagtccaccgcgccaacgactcctt-cgccg--gcaccg 281 |||||||| | |||||||| || || |||| ||||||||||| || || || || || Sbjct: 39203 acgccgccgtgatccgctcggccgtggaccgtgccaacgactcgttccgtcgcaacaacg 39262 Query: 282 gctccccggccatcgacatcgccgtcgtgcccttccccgacgtcgggctccctccaggcg 341 || || ||| ||||| || |||||||||| || || ||||| |||||||| || ||| Sbjct: 39263 gcggcctggcgatcgaactcaccgtcgtgccatttccggacgttgggctcccgccgggct 39322 Query: 342 tggagaacggcacggccctcgcgtcccaggacgaccgcgacaagttcttcc 392 | |||| |||||||| || || ||||||||||||| ||||||||||||| Sbjct: 39323 tcgagagtggcacggcgcttacgacccaggacgaccgtgacaagttcttcc 39373 Score = 143 bits (72), Expect = 8e-31 Identities = 180/216 (83%) Strand = Plus / Plus Query: 403 gctgctccgggagcccttcgaccggttcctggctgaccaccgcatcgacgccgtcgtgtc 462 |||||||| |||||||||||||||| |||| | || |||| | ||||||||| |||| Sbjct: 39384 gctgctccatgagcccttcgaccggtacctgtcggagcaccacgtcgacgccgccgtggt 39443 Query: 463 cgacagcttcttcgactggtctgccgacgccgccgcggagcgcggcgtcccgcgcatcgc 522 |||||||||||| ||| | || ||||||||||| |||| |||||||||||| | | Sbjct: 39444 ggacagcttcttcaggtgggccgcggacgccgccgccgagcacggcgtcccgcggctggg 39503 Query: 523 gtttctgggcagcagcatgttcgcgcgctcctgcagcgacagcatgctgcgccacaaccc 582 ||| || |||| |||| |||||||| | |||||| | |||||||||||||| ||||||| Sbjct: 39504 gttcctcggcaccagcgtgttcgcgagggcctgcaccaacagcatgctgcgcaacaaccc 39563 Query: 583 gctggagaacgcccccgacgaccccgacgccctcgt 618 |||||||| |||||||||||||||||||||| |||| Sbjct: 39564 gctggagaccgcccccgacgaccccgacgccgtcgt 39599
>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696E01 Length = 194056 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 413 gagcccttcgaccggttcctggctgaccaccgcatcgacgccgtcgtgtccgacagcttc 472 ||||| |||||||||||| |||| || |||| || ||||||||||||| |||||||||| Sbjct: 137507 gagccgttcgaccggttcttggccgagcaccacaccgacgccgtcgtggtcgacagcttc 137566 Query: 473 ttcgactggtctgccgacgccgccgcggagcgcggcgtcccgcgcatcgcgtttctgggc 532 ||| ||||||| | |||||||||||||| | ||| ||||||||| | ||||| || ||| Sbjct: 137567 ttccactggtcctcggacgccgccgcggaccacggtgtcccgcgcctggcgttcctcggc 137626 Query: 533 agcagcatgttcgcgcgctcctgcagcgacagcatgctgcgccacaacccgctggagaac 592 |||||| |||||||||| |||||||||||||||||||||||||||||||| ||||| | Sbjct: 137627 agcagcctgttcgcgcgggcctgcagcgacagcatgctgcgccacaacccggtggaggcc 137686 Query: 593 gcccccgacgaccccgacgccctcgt 618 |||||||||||||||||||| |||| Sbjct: 137687 tcccccgacgaccccgacgccgtcgt 137712 Score = 165 bits (83), Expect = 2e-37 Identities = 203/243 (83%) Strand = Plus / Plus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 ||||| |||||||||||||||||||||| | || |||||||||||||||| | |||| Sbjct: 137199 agccgttgcacatcctcttcttcccgtttatcgcgcacggccacctcatcccggtggccg 137258 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 ||||||||||||| ||||||| ||||||||| ||||| |||||||||||||| ||||||| Sbjct: 137259 acatggccgcgcttttcgccgcccgcggcgttcggtgtaccatcctcaccacccccgtca 137318 Query: 225 acgccgccatcatccgctccgcagtccaccgcgccaacgactccttcgccggcaccggct 284 |||||||| ||||||| || || || |||| |||||||| ||| | |||||||||| Sbjct: 137319 acgccgccgtcatccgttcagccgtggaccgtgccaacgatgcctcccgtggcaccggct 137378 Query: 285 ccccggccatcgacatcgccgtcgtgcccttccccgacgtcgggctccctccaggcgtgg 344 | |||| ||| |||| | || | ||||||||||||||||||||||| || ||||| | Sbjct: 137379 caccggagatcagcatcacgctcttccccttccccgacgtcgggctcccgccgggcgtcg 137438 Query: 345 aga 347 ||| Sbjct: 137439 aga 137441 Score = 151 bits (76), Expect = 3e-33 Identities = 239/291 (82%), Gaps = 3/291 (1%) Strand = Plus / Plus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 |||| |||||||||||||||||||| ||||| || |||| || |||||||||||||||| Sbjct: 119880 agccactgcacatcctcttcttcccattcctcgcgcccggtcatctcatcccgatcgccg 119939 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 | |||||||| || ||||||| || |||||| ||||||||||||||||||| || |||| Sbjct: 119940 atatggccgctctgttcgccgctcgtggcgtcaggtgcaccatcctcaccacccctgtca 119999 Query: 225 acgccgccatcatccgctccgcagtccaccgcgccaacgactcctt-cgccg--gcaccg 281 |||||||| | |||||||| || || |||| ||||||||||| || || || || || Sbjct: 120000 acgccgccgtgatccgctcggccgtggaccgtgccaacgactcgttccgtcgcaacaacg 120059 Query: 282 gctccccggccatcgacatcgccgtcgtgcccttccccgacgtcgggctccctccaggcg 341 || || ||| ||||| || |||||||||| || || ||||| |||||||| || ||| Sbjct: 120060 gcggcctggcgatcgaactcaccgtcgtgccatttccggacgttgggctcccgccgggct 120119 Query: 342 tggagaacggcacggccctcgcgtcccaggacgaccgcgacaagttcttcc 392 | |||| |||||||| || || ||||||||||||| ||||||||||||| Sbjct: 120120 tcgagagtggcacggcgcttacgacccaggacgaccgtgacaagttcttcc 120170 Score = 143 bits (72), Expect = 8e-31 Identities = 180/216 (83%) Strand = Plus / Plus Query: 403 gctgctccgggagcccttcgaccggttcctggctgaccaccgcatcgacgccgtcgtgtc 462 |||||||| |||||||||||||||| |||| | || |||| | ||||||||| |||| Sbjct: 120181 gctgctccatgagcccttcgaccggtacctgtcggagcaccacgtcgacgccgccgtggt 120240 Query: 463 cgacagcttcttcgactggtctgccgacgccgccgcggagcgcggcgtcccgcgcatcgc 522 |||||||||||| ||| | || ||||||||||| |||| |||||||||||| | | Sbjct: 120241 ggacagcttcttcaggtgggccgcggacgccgccgccgagcacggcgtcccgcggctggg 120300 Query: 523 gtttctgggcagcagcatgttcgcgcgctcctgcagcgacagcatgctgcgccacaaccc 582 ||| || |||| |||| |||||||| | |||||| | |||||||||||||| ||||||| Sbjct: 120301 gttcctcggcaccagcgtgttcgcgagggcctgcaccaacagcatgctgcgcaacaaccc 120360 Query: 583 gctggagaacgcccccgacgaccccgacgccctcgt 618 |||||||| |||||||||||||||||||||| |||| Sbjct: 120361 gctggagaccgcccccgacgaccccgacgccgtcgt 120396
>gb|DQ123897.1| Zea mays RFLP probe umc63 (CBM 3.09) genomic sequence Length = 881 Score = 190 bits (96), Expect = 4e-45 Identities = 194/226 (85%), Gaps = 3/226 (1%) Strand = Plus / Plus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 ||||||||||||||||||||||||||||||| || | || ||||||||||||||||||| Sbjct: 425 agccgctgcacatcctcttcttcccgttcctcgcgccggggcacctcatcccgatcgccg 484 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 ||||||||||||||||||| | ||| |||||| ||||||||||||||||||| || || | Sbjct: 485 acatggccgcgctcttcgctgcccgaggcgtcaggtgcaccatcctcaccacaccggtga 544 Query: 225 acgccgccatcatccgctccgcagtccaccgcgccaacgactccttcgccggcacc---g 281 ||||| |||||||||| || || |||||||||||||| ||| | ||||||| | Sbjct: 545 acgcccaactcatccgctcggcggtagaccgcgccaacgacgcctcccgcggcaccgagg 604 Query: 282 gctccccggccatcgacatcgccgtcgtgcccttccccgacgtcgg 327 || ||| ||||||||||||||| |||||||| || ||||||||||| Sbjct: 605 gcgccctggccatcgacatcgcggtcgtgccttttcccgacgtcgg 650 Score = 168 bits (85), Expect = 1e-38 Identities = 163/189 (86%) Strand = Plus / Plus Query: 370 ggacgaccgcgacaagttcttccgcgcggcccagctgctccgggagcccttcgaccggtt 429 |||||||||||| |||||||||| || ||||||| | ||||| ||||| ||||||||||| Sbjct: 693 ggacgaccgcgaaaagttcttccacggggcccagttactccgcgagccgttcgaccggtt 752 Query: 430 cctggctgaccaccgcatcgacgccgtcgtgtccgacagcttcttcgactggtctgccga 489 | |||| || ||||| ||||||| |||| |||||||||||||||||||||| ||||| Sbjct: 753 cttggcggagaaccgcccggacgccgccgtgaccgacagcttcttcgactggtccgccga 812 Query: 490 cgccgccgcggagcgcggcgtcccgcgcatcgcgtttctgggcagcagcatgttcgcgcg 549 |||||||||||||| |||||||||||| || ||||| || ||||||||| ||||| |||| Sbjct: 813 cgccgccgcggagcacggcgtcccgcggatagcgttcctcggcagcagcttgttctcgcg 872 Query: 550 ctcctgcag 558 ||||||| Sbjct: 873 ggcctgcag 881
>ref|XM_463383.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1485 Score = 168 bits (85), Expect = 1e-38 Identities = 142/161 (88%) Strand = Plus / Plus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 |||| ||||||||||||||| |||||||||| | |||||||||||||||||||||||| Sbjct: 14 agccactgcacatcctcttcctcccgttcctcgtgcccggccacctcatcccgatcgccg 73 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 ||||||||||||||||||| | ||||||||| ||||||||||||||||||| ||||||| Sbjct: 74 acatggccgcgctcttcgcggcacgcggcgtcaggtgcaccatcctcaccacccccgtca 133 Query: 225 acgccgccatcatccgctccgcagtccaccgcgccaacgac 265 | |||||| || ||||| | || || |||||||||||||| Sbjct: 134 atgccgccgtcgtccgccctgccgtggaccgcgccaacgac 174 Score = 149 bits (75), Expect = 1e-32 Identities = 246/303 (81%) Strand = Plus / Plus Query: 287 ccggccatcgacatcgccgtcgtgcccttccccgacgtcgggctccctccaggcgtggag 346 ||||| |||||||||||||||||||| ||||| |||||||||||||| || ||||| ||| Sbjct: 205 ccggcgatcgacatcgccgtcgtgccattcccggacgtcgggctcccgccgggcgtcgag 264 Query: 347 aacggcacggccctcgcgtcccaggacgaccgcgacaagttcttccgcgcggcccagctg 406 | ||||||||| || || ||| |||| ||||| | ||||||| ||| || ||||| | Sbjct: 265 agcggcacggcgcttgcttccgaggaggaccgtggcaagttcgtccatgccatccagcgg 324 Query: 407 ctccgggagcccttcgaccggttcctggctgaccaccgcatcgacgccgtcgtgtccgac 466 || || ||||| |||||||||||| |||| || |||| | ||||||||||||| ||||| Sbjct: 325 ctgcgcgagccgttcgaccggttcatggcggagcaccaccccgacgccgtcgtggccgac 384 Query: 467 agcttcttcgactggtctgccgacgccgccgcggagcgcggcgtcccgcgcatcgcgttt 526 |||||||| ||||| | ||||||||||| |||| |||||||||||| | | ||| Sbjct: 385 ggcttcttcacttggtccgtggacgccgccgccgagcacggcgtcccgcggctggtgttc 444 Query: 527 ctgggcagcagcatgttcgcgcgctcctgcagcgacagcatgctgcgccacaacccgctg 586 || |||| | || |||||||||| || ||| || |||||| |||||||||||||| || Sbjct: 445 ctcggcaccggcgtgttcgcgcggtcatgccaggagagcatggtgcgccacaacccggtg 504 Query: 587 gag 589 ||| Sbjct: 505 gag 507
>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025A05 Length = 154298 Score = 168 bits (85), Expect = 1e-38 Identities = 142/161 (88%) Strand = Plus / Plus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 |||| ||||||||||||||| |||||||||| | |||||||||||||||||||||||| Sbjct: 15593 agccactgcacatcctcttcctcccgttcctcgtgcccggccacctcatcccgatcgccg 15652 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 ||||||||||||||||||| | ||||||||| ||||||||||||||||||| ||||||| Sbjct: 15653 acatggccgcgctcttcgcggcacgcggcgtcaggtgcaccatcctcaccacccccgtca 15712 Query: 225 acgccgccatcatccgctccgcagtccaccgcgccaacgac 265 | |||||| || ||||| | || || |||||||||||||| Sbjct: 15713 atgccgccgtcgtccgccctgccgtggaccgcgccaacgac 15753 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Plus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 |||| ||||||||||||||| |||||||||| | |||||||||||||||||||||||| Sbjct: 23174 agccactgcacatcctcttcctcccgttcctcgtgcccggccacctcatcccgatcgccg 23233 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 ||||||||||||||||||| | ||||||||| ||||||||||||||||||| ||||||| Sbjct: 23234 acatggccgcgctcttcgcggcacgcggcgtcaggtgcaccatcctcaccacccccgtca 23293 Query: 225 acgc 228 |||| Sbjct: 23294 acgc 23297 Score = 149 bits (75), Expect = 1e-32 Identities = 246/303 (81%) Strand = Plus / Plus Query: 287 ccggccatcgacatcgccgtcgtgcccttccccgacgtcgggctccctccaggcgtggag 346 ||||| |||||||||||||||||||| ||||| |||||||||||||| || ||||| ||| Sbjct: 15784 ccggcgatcgacatcgccgtcgtgccattcccggacgtcgggctcccgccgggcgtcgag 15843 Query: 347 aacggcacggccctcgcgtcccaggacgaccgcgacaagttcttccgcgcggcccagctg 406 | ||||||||| || || ||| |||| ||||| | ||||||| ||| || ||||| | Sbjct: 15844 agcggcacggcgcttgcttccgaggaggaccgtggcaagttcgtccatgccatccagcgg 15903 Query: 407 ctccgggagcccttcgaccggttcctggctgaccaccgcatcgacgccgtcgtgtccgac 466 || || ||||| |||||||||||| |||| || |||| | ||||||||||||| ||||| Sbjct: 15904 ctgcgcgagccgttcgaccggttcatggcggagcaccaccccgacgccgtcgtggccgac 15963 Query: 467 agcttcttcgactggtctgccgacgccgccgcggagcgcggcgtcccgcgcatcgcgttt 526 |||||||| ||||| | ||||||||||| |||| |||||||||||| | | ||| Sbjct: 15964 ggcttcttcacttggtccgtggacgccgccgccgagcacggcgtcccgcggctggtgttc 16023 Query: 527 ctgggcagcagcatgttcgcgcgctcctgcagcgacagcatgctgcgccacaacccgctg 586 || |||| | || |||||||||| || ||| || |||||| |||||||||||||| || Sbjct: 16024 ctcggcaccggcgtgttcgcgcggtcatgccaggagagcatggtgcgccacaacccggtg 16083 Query: 587 gag 589 ||| Sbjct: 16084 gag 16086 Score = 133 bits (67), Expect = 8e-28 Identities = 235/291 (80%) Strand = Plus / Plus Query: 293 atcgacatcgccgtcgtgcccttccccgacgtcgggctccctccaggcgtggagaacggc 352 |||||||||||||||||||| || || |||||||||||||| || ||||| ||||||||| Sbjct: 23374 atcgacatcgccgtcgtgccatttccggacgtcgggctcccgccgggcgtcgagaacggc 23433 Query: 353 acggccctcgcgtcccaggacgaccgcgacaagttcttccgcgcggcccagctgctccgg 412 |||| || | ||| |||||||| || |||||||| ||| || || ||| || Sbjct: 23434 gcggcgcttacttccgaggacgacgttcgcaggttcttccacgccatccggcggctgcgc 23493 Query: 413 gagcccttcgaccggttcctggctgaccaccgcatcgacgccgtcgtgtccgacagcttc 472 ||||| |||||||||||| |||| || |||||| ||||||||||||||||||| ||||| Sbjct: 23494 gagccgttcgaccggttcatggcggagcaccgccccgacgccgtcgtgtccgacggcttc 23553 Query: 473 ttcgactggtctgccgacgccgccgcggagcgcggcgtcccgcgcatcgcgtttctgggc 532 ||| ||||| || ||||||||||| | || |||||||||||| | | ||| || ||| Sbjct: 23554 ttcacttggtccgcggacgccgccgccgcgcacggcgtcccgcggctggtgttcctcggc 23613 Query: 533 agcagcatgttcgcgcgctcctgcagcgacagcatgctgcgccacaacccg 583 | |||| |||||||||| | |||| ||| | |||| |||||||||||||| Sbjct: 23614 accagcgtgttcgcgcggttgtgcaacgagatcatggtgcgccacaacccg 23664
>dbj|AK102671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102B03, full insert sequence Length = 1675 Score = 168 bits (85), Expect = 1e-38 Identities = 142/161 (88%) Strand = Plus / Plus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 |||| ||||||||||||||| |||||||||| | |||||||||||||||||||||||| Sbjct: 103 agccactgcacatcctcttcctcccgttcctcgtgcccggccacctcatcccgatcgccg 162 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 ||||||||||||||||||| | ||||||||| ||||||||||||||||||| ||||||| Sbjct: 163 acatggccgcgctcttcgcggcacgcggcgtcaggtgcaccatcctcaccacccccgtca 222 Query: 225 acgccgccatcatccgctccgcagtccaccgcgccaacgac 265 | |||||| || ||||| | || || |||||||||||||| Sbjct: 223 atgccgccgtcgtccgccctgccgtggaccgcgccaacgac 263 Score = 149 bits (75), Expect = 1e-32 Identities = 246/303 (81%) Strand = Plus / Plus Query: 287 ccggccatcgacatcgccgtcgtgcccttccccgacgtcgggctccctccaggcgtggag 346 ||||| |||||||||||||||||||| ||||| |||||||||||||| || ||||| ||| Sbjct: 294 ccggcgatcgacatcgccgtcgtgccattcccggacgtcgggctcccgccgggcgtcgag 353 Query: 347 aacggcacggccctcgcgtcccaggacgaccgcgacaagttcttccgcgcggcccagctg 406 | ||||||||| || || ||| |||| ||||| | ||||||| ||| || ||||| | Sbjct: 354 agcggcacggcgcttgcttccgaggaggaccgtggcaagttcgtccatgccatccagcgg 413 Query: 407 ctccgggagcccttcgaccggttcctggctgaccaccgcatcgacgccgtcgtgtccgac 466 || || ||||| |||||||||||| |||| || |||| | ||||||||||||| ||||| Sbjct: 414 ctgcgcgagccgttcgaccggttcatggcggagcaccaccccgacgccgtcgtggccgac 473 Query: 467 agcttcttcgactggtctgccgacgccgccgcggagcgcggcgtcccgcgcatcgcgttt 526 |||||||| ||||| | ||||||||||| |||| |||||||||||| | | ||| Sbjct: 474 ggcttcttcacttggtccgtggacgccgccgccgagcacggcgtcccgcggctggtgttc 533 Query: 527 ctgggcagcagcatgttcgcgcgctcctgcagcgacagcatgctgcgccacaacccgctg 586 || |||| | || |||||||||| || ||| || |||||| |||||||||||||| || Sbjct: 534 ctcggcaccggcgtgttcgcgcggtcatgccaggagagcatggtgcgccacaacccggtg 593 Query: 587 gag 589 ||| Sbjct: 594 gag 596
>dbj|AK063325.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-H06, full insert sequence Length = 1962 Score = 168 bits (85), Expect = 1e-38 Identities = 142/161 (88%) Strand = Plus / Plus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 |||| ||||||||||||||| |||||||||| | |||||||||||||||||||||||| Sbjct: 104 agccactgcacatcctcttcctcccgttcctcgtgcccggccacctcatcccgatcgccg 163 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 ||||||||||||||||||| | ||||||||| ||||||||||||||||||| ||||||| Sbjct: 164 acatggccgcgctcttcgcggcacgcggcgtcaggtgcaccatcctcaccacccccgtca 223 Query: 225 acgccgccatcatccgctccgcagtccaccgcgccaacgac 265 | |||||| || ||||| | || || |||||||||||||| Sbjct: 224 atgccgccgtcgtccgccctgccgtggaccgcgccaacgac 264 Score = 149 bits (75), Expect = 1e-32 Identities = 246/303 (81%) Strand = Plus / Plus Query: 287 ccggccatcgacatcgccgtcgtgcccttccccgacgtcgggctccctccaggcgtggag 346 ||||| |||||||||||||||||||| ||||| |||||||||||||| || ||||| ||| Sbjct: 295 ccggcgatcgacatcgccgtcgtgccattcccggacgtcgggctcccgccgggcgtcgag 354 Query: 347 aacggcacggccctcgcgtcccaggacgaccgcgacaagttcttccgcgcggcccagctg 406 | ||||||||| || || ||| |||| ||||| | ||||||| ||| || ||||| | Sbjct: 355 agcggcacggcgcttgcttccgaggaggaccgtggcaagttcgtccatgccatccagcgg 414 Query: 407 ctccgggagcccttcgaccggttcctggctgaccaccgcatcgacgccgtcgtgtccgac 466 || || ||||| |||||||||||| |||| || |||| | ||||||||||||| ||||| Sbjct: 415 ctgcgcgagccgttcgaccggttcatggcggagcaccaccccgacgccgtcgtggccgac 474 Query: 467 agcttcttcgactggtctgccgacgccgccgcggagcgcggcgtcccgcgcatcgcgttt 526 |||||||| ||||| | ||||||||||| |||| |||||||||||| | | ||| Sbjct: 475 ggcttcttcacttggtccgtggacgccgccgccgagcacggcgtcccgcggctggtgttc 534 Query: 527 ctgggcagcagcatgttcgcgcgctcctgcagcgacagcatgctgcgccacaacccgctg 586 || |||| | || |||||||||| || ||| || |||||| |||||||||||||| || Sbjct: 535 ctcggcaccggcgtgttcgcgcggtcatgccaggagagcatggtgcgccacaacccggtg 594 Query: 587 gag 589 ||| Sbjct: 595 gag 597
>ref|NM_192244.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1476 Score = 151 bits (76), Expect = 3e-33 Identities = 239/291 (82%), Gaps = 3/291 (1%) Strand = Plus / Plus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 |||| |||||||||||||||||||| ||||| || |||| || |||||||||||||||| Sbjct: 23 agccactgcacatcctcttcttcccattcctcgcgcccggtcatctcatcccgatcgccg 82 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 | |||||||| || ||||||| || |||||| ||||||||||||||||||| || |||| Sbjct: 83 atatggccgctctgttcgccgctcgtggcgtcaggtgcaccatcctcaccacccctgtca 142 Query: 225 acgccgccatcatccgctccgcagtccaccgcgccaacgactcctt-cgccg--gcaccg 281 |||||||| | |||||||| || || |||| ||||||||||| || || || || || Sbjct: 143 acgccgccgtgatccgctcggccgtggaccgtgccaacgactcgttccgtcgcaacaacg 202 Query: 282 gctccccggccatcgacatcgccgtcgtgcccttccccgacgtcgggctccctccaggcg 341 || || ||| ||||| || |||||||||| || || ||||| |||||||| || ||| Sbjct: 203 gcggcctggcgatcgaactcaccgtcgtgccatttccggacgttgggctcccgccgggct 262 Query: 342 tggagaacggcacggccctcgcgtcccaggacgaccgcgacaagttcttcc 392 | |||| |||||||| || || ||||||||||||| ||||||||||||| Sbjct: 263 tcgagagtggcacggcgcttacgacccaggacgaccgtgacaagttcttcc 313 Score = 143 bits (72), Expect = 8e-31 Identities = 180/216 (83%) Strand = Plus / Plus Query: 403 gctgctccgggagcccttcgaccggttcctggctgaccaccgcatcgacgccgtcgtgtc 462 |||||||| |||||||||||||||| |||| | || |||| | ||||||||| |||| Sbjct: 324 gctgctccatgagcccttcgaccggtacctgtcggagcaccacgtcgacgccgccgtggt 383 Query: 463 cgacagcttcttcgactggtctgccgacgccgccgcggagcgcggcgtcccgcgcatcgc 522 |||||||||||| ||| | || ||||||||||| |||| |||||||||||| | | Sbjct: 384 ggacagcttcttcaggtgggccgcggacgccgccgccgagcacggcgtcccgcggctggg 443 Query: 523 gtttctgggcagcagcatgttcgcgcgctcctgcagcgacagcatgctgcgccacaaccc 582 ||| || |||| |||| |||||||| | |||||| | |||||||||||||| ||||||| Sbjct: 444 gttcctcggcaccagcgtgttcgcgagggcctgcaccaacagcatgctgcgcaacaaccc 503 Query: 583 gctggagaacgcccccgacgaccccgacgccctcgt 618 |||||||| |||||||||||||||||||||| |||| Sbjct: 504 gctggagaccgcccccgacgaccccgacgccgtcgt 539
>dbj|AK103824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147K24, full insert sequence Length = 1896 Score = 151 bits (76), Expect = 3e-33 Identities = 239/291 (82%), Gaps = 3/291 (1%) Strand = Plus / Plus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 |||| |||||||||||||||||||| ||||| || |||| || |||||||||||||||| Sbjct: 120 agccactgcacatcctcttcttcccattcctcgcgcccggtcatctcatcccgatcgccg 179 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 | |||||||| || ||||||| || |||||| ||||||||||||||||||| || |||| Sbjct: 180 atatggccgctctgttcgccgctcgtggcgtcaggtgcaccatcctcaccacccctgtca 239 Query: 225 acgccgccatcatccgctccgcagtccaccgcgccaacgactcctt-cgccg--gcaccg 281 |||||||| | |||||||| || || |||| ||||||||||| || || || || || Sbjct: 240 acgccgccgtgatccgctcggccgtggaccgtgccaacgactcgttccgtcgcaacaacg 299 Query: 282 gctccccggccatcgacatcgccgtcgtgcccttccccgacgtcgggctccctccaggcg 341 || || ||| ||||| || |||||||||| || || ||||| |||||||| || ||| Sbjct: 300 gcggcctggcgatcgaactcaccgtcgtgccatttccggacgttgggctcccgccgggct 359 Query: 342 tggagaacggcacggccctcgcgtcccaggacgaccgcgacaagttcttcc 392 | |||| |||||||| || || ||||||||||||| ||||||||||||| Sbjct: 360 tcgagagtggcacggcgcttacgacccaggacgaccgtgacaagttcttcc 410 Score = 143 bits (72), Expect = 8e-31 Identities = 180/216 (83%) Strand = Plus / Plus Query: 403 gctgctccgggagcccttcgaccggttcctggctgaccaccgcatcgacgccgtcgtgtc 462 |||||||| |||||||||||||||| |||| | || |||| | ||||||||| |||| Sbjct: 421 gctgctccatgagcccttcgaccggtacctgtcggagcaccacgtcgacgccgccgtggt 480 Query: 463 cgacagcttcttcgactggtctgccgacgccgccgcggagcgcggcgtcccgcgcatcgc 522 |||||||||||| ||| | || ||||||||||| |||| |||||||||||| | | Sbjct: 481 ggacagcttcttcaggtgggccgcggacgccgccgccgagcacggcgtcccgcggctggg 540 Query: 523 gtttctgggcagcagcatgttcgcgcgctcctgcagcgacagcatgctgcgccacaaccc 582 ||| || |||| |||| |||||||| | |||||| | |||||||||||||| ||||||| Sbjct: 541 gttcctcggcaccagcgtgttcgcgagggcctgcaccaacagcatgctgcgcaacaaccc 600 Query: 583 gctggagaacgcccccgacgaccccgacgccctcgt 618 |||||||| |||||||||||||||||||||| |||| Sbjct: 601 gctggagaccgcccccgacgaccccgacgccgtcgt 636
>dbj|AK101659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057I21, full insert sequence Length = 1896 Score = 151 bits (76), Expect = 3e-33 Identities = 239/291 (82%), Gaps = 3/291 (1%) Strand = Plus / Plus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 |||| |||||||||||||||||||| ||||| || |||| || |||||||||||||||| Sbjct: 120 agccactgcacatcctcttcttcccattcctcgcgcccggtcatctcatcccgatcgccg 179 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 | |||||||| || ||||||| || |||||| ||||||||||||||||||| || |||| Sbjct: 180 atatggccgctctgttcgccgctcgtggcgtcaggtgcaccatcctcaccacccctgtca 239 Query: 225 acgccgccatcatccgctccgcagtccaccgcgccaacgactcctt-cgccg--gcaccg 281 |||||||| | |||||||| || || |||| ||||||||||| || || || || || Sbjct: 240 acgccgccgtgatccgctcggccgtggaccgtgccaacgactcgttccgtcgcaacaacg 299 Query: 282 gctccccggccatcgacatcgccgtcgtgcccttccccgacgtcgggctccctccaggcg 341 || || ||| ||||| || |||||||||| || || ||||| |||||||| || ||| Sbjct: 300 gcggcctggcgatcgaactcaccgtcgtgccatttccggacgttgggctcccgccgggct 359 Query: 342 tggagaacggcacggccctcgcgtcccaggacgaccgcgacaagttcttcc 392 | |||| |||||||| || || ||||||||||||| ||||||||||||| Sbjct: 360 tcgagagtggcacggcgcttacgacccaggacgaccgtgacaagttcttcc 410 Score = 143 bits (72), Expect = 8e-31 Identities = 180/216 (83%) Strand = Plus / Plus Query: 403 gctgctccgggagcccttcgaccggttcctggctgaccaccgcatcgacgccgtcgtgtc 462 |||||||| |||||||||||||||| |||| | || |||| | ||||||||| |||| Sbjct: 421 gctgctccatgagcccttcgaccggtacctgtcggagcaccacgtcgacgccgccgtggt 480 Query: 463 cgacagcttcttcgactggtctgccgacgccgccgcggagcgcggcgtcccgcgcatcgc 522 |||||||||||| ||| | || ||||||||||| |||| |||||||||||| | | Sbjct: 481 ggacagcttcttcaggtgggccgcggacgccgccgccgagcacggcgtcccgcggctggg 540 Query: 523 gtttctgggcagcagcatgttcgcgcgctcctgcagcgacagcatgctgcgccacaaccc 582 ||| || |||| |||| |||||||| | |||||| | |||||||||||||| ||||||| Sbjct: 541 gttcctcggcaccagcgtgttcgcgagggcctgcaccaacagcatgctgcgcaacaaccc 600 Query: 583 gctggagaacgcccccgacgaccccgacgccctcgt 618 |||||||| |||||||||||||||||||||| |||| Sbjct: 601 gctggagaccgcccccgacgaccccgacgccgtcgt 636
>gb|AY459338.1| Oryza sativa (japonica cultivar-group) clone CL029396.2 R2R3-MYB gene region Length = 16710 Score = 143 bits (72), Expect = 8e-31 Identities = 180/216 (83%) Strand = Plus / Minus Query: 403 gctgctccgggagcccttcgaccggttcctggctgaccaccgcatcgacgccgtcgtgtc 462 |||||||| |||||||||||||||| |||| | || |||| | ||||||||| |||| Sbjct: 6193 gctgctccatgagcccttcgaccggtacctgtcggagcaccacgtcgacgccgccgtggt 6134 Query: 463 cgacagcttcttcgactggtctgccgacgccgccgcggagcgcggcgtcccgcgcatcgc 522 |||||||||||| ||| | || ||||||||||| |||| |||||||||||| | | Sbjct: 6133 ggacagcttcttcaggtgggccgcggacgccgccgccgagcacggcgtcccgcggctggg 6074 Query: 523 gtttctgggcagcagcatgttcgcgcgctcctgcagcgacagcatgctgcgccacaaccc 582 ||| || |||| |||| |||||||| | |||||| | |||||||||||||| ||||||| Sbjct: 6073 gttcctcggcaccagcgtgttcgcgagggcctgcaccaacagcatgctgcgcaacaaccc 6014 Query: 583 gctggagaacgcccccgacgaccccgacgccctcgt 618 |||||||| |||||||||||||||||||||| |||| Sbjct: 6013 gctggagaccgcccccgacgaccccgacgccgtcgt 5978 Score = 133 bits (67), Expect = 8e-28 Identities = 121/139 (87%) Strand = Plus / Minus Query: 105 agccgctgcacatcctcttcttcccgttcctggcctccggccacctcatcccgatcgccg 164 |||| |||||||||||||||||||| ||||| || |||| || |||||||||||||||| Sbjct: 6495 agccactgcacatcctcttcttcccattcctcgcgcccggtcatctcatcccgatcgccg 6436 Query: 165 acatggccgcgctcttcgccggccgcggcgtccggtgcaccatcctcaccacgcccgtca 224 | |||||||| || ||||||| || |||||| ||||||||||||||||||| || |||| Sbjct: 6435 atatggccgctctgttcgccgctcgtggcgtcaggtgcaccatcctcaccacccctgtca 6376 Query: 225 acgccgccatcatccgctc 243 |||||||| | |||||||| Sbjct: 6375 acgccgccgtgatccgctc 6357 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Minus Query: 303 ccgtcgtgcccttccccgacgtcgggctccctccaggcgtggagaacggcacggccctcg 362 |||||||||| || || ||||| |||||||| || ||| | |||| |||||||| || Sbjct: 6293 ccgtcgtgccatttccggacgttgggctcccgccgggcttcgagagtggcacggcgctta 6234 Query: 363 cgtcccaggacgaccgcgacaagttcttcc 392 || ||||||||||||| ||||||||||||| Sbjct: 6233 cgacccaggacgaccgtgacaagttcttcc 6204
>emb|AJ496572.1|HVU496572 Hordeum vulgare partial mRNA for putative glycosyltransferase (sf2 gene) Length = 863 Score = 119 bits (60), Expect = 1e-23 Identities = 60/60 (100%) Strand = Plus / Plus Query: 572 cgccacaacccgctggagaacgcccccgacgaccccgacgccctcgttttgctgccgggg 631 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgccacaacccgctggagaacgcccccgacgaccccgacgccctcgttttgctgccgggg 60
>ref|NM_191567.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 487 cgacgccgccgcggagcgcggcgtcccg 514 ||||||||||||||||| |||||||||| Sbjct: 366 cgacgccgccgcggagctcggcgtcccg 393
>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1060H01 Length = 157987 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 487 cgacgccgccgcggagcgcggcgtcccg 514 ||||||||||||||||| |||||||||| Sbjct: 126597 cgacgccgccgcggagctcggcgtcccg 126570
>dbj|AK108695.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-G02, full insert sequence Length = 1463 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 487 cgacgccgccgcggagcgcggcgtcccg 514 ||||||||||||||||| |||||||||| Sbjct: 924 cgacgccgccgcggagctcggcgtcccg 897
>dbj|AK107156.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-E08, full insert sequence Length = 1603 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Plus Query: 487 cgacgccgccgcggagcgcggcgtcccg 514 ||||||||||||||||| |||||||||| Sbjct: 391 cgacgccgccgcggagctcggcgtcccg 418
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 502 gcgcggcgtcccgcgcatcgcgt 524 ||||||||||||||||||||||| Sbjct: 2358926 gcgcggcgtcccgcgcatcgcgt 2358948 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 tcgccgacatggccgcgctc 178 |||||||||||||||||||| Sbjct: 1337636 tcgccgacatggccgcgctc 1337617
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 502 gcgcggcgtcccgcgcatcgcgt 524 ||||||||||||||||||||||| Sbjct: 1137523 gcgcggcgtcccgcgcatcgcgt 1137501 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tcgccgacatggccgcgctc 178 |||||||||||||||||||| Sbjct: 2122393 tcgccgacatggccgcgctc 2122412
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 502 gcgcggcgtcccgcgcatcgcgt 524 ||||||||||||||||||||||| Sbjct: 1018483 gcgcggcgtcccgcgcatcgcgt 1018461 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 tcgccgacatggccgcgctc 178 |||||||||||||||||||| Sbjct: 2250829 tcgccgacatggccgcgctc 2250810
>gb|BT018687.1| Zea mays clone EL01N0512A10.d mRNA sequence Length = 1829 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 484 tgccgacgccgccgcggagcgcggcg 509 ||||||||||| |||||||||||||| Sbjct: 64 tgccgacgccgacgcggagcgcggcg 39
>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013F10 Length = 163095 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 210 tcaccacgcccgtcaacgccgc 231 |||||||||||||||||||||| Sbjct: 37066 tcaccacgcccgtcaacgccgc 37045
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 490 cgccgccgcggagcgcggcgtc 511 |||||||||||||||||||||| Sbjct: 1843618 cgccgccgcggagcgcggcgtc 1843639
>ref|XM_483004.1| Oryza sativa (japonica cultivar-group), mRNA Length = 769 Score = 42.1 bits (21), Expect = 2.2 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 166 catggccgcgctcttcgccggccgcggcg 194 ||||||||||||||||||| ||||||||| Sbjct: 124 catggccgcgctcttcgcc-gccgcggcg 151
>ref|XM_473829.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2778 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 gccatggctgtccacgacgagccgc 110 |||||||||||| |||||||||||| Sbjct: 2722 gccatggctgtcgacgacgagccgc 2746
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 cggccatcgacatcgccgtcg 308 ||||||||||||||||||||| Sbjct: 1924784 cggccatcgacatcgccgtcg 1924764
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 tcccgatcgccgacatggccg 173 ||||||||||||||||||||| Sbjct: 730331 tcccgatcgccgacatggccg 730311
>emb|AL359546.19| Human DNA sequence from clone RP11-125C10 on chromosome 10 Contains the 5' end of the gene for a novel protein (LOC220929) (FLJ32761) and two CpG islands, complete sequence Length = 174470 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 552 cctgcagcgacagcatgctgc 572 ||||||||||||||||||||| Sbjct: 103104 cctgcagcgacagcatgctgc 103124
>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03, complete sequence Length = 179798 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 86 gccatggctgtccacgacgagccgc 110 |||||||||||| |||||||||||| Sbjct: 100564 gccatggctgtcgacgacgagccgc 100540
>emb|AL583917.1|MLEPRTN1 Mycobacterium leprae strain TN complete genome; segment 1/10 Length = 344050 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 448 cgacgccgtcgtgtccgacag 468 ||||||||||||||||||||| Sbjct: 264104 cgacgccgtcgtgtccgacag 264124
>emb|AL023093.1|MLCB2548 Mycobacterium leprae cosmid B2548 Length = 38916 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 cgacgccgtcgtgtccgacag 468 ||||||||||||||||||||| Sbjct: 37934 cgacgccgtcgtgtccgacag 37914
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 544 cgcgcgctcctgcagcgacagcatg 568 |||||||||||||||| |||||||| Sbjct: 1322200 cgcgcgctcctgcagccacagcatg 1322224
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 86 gccatggctgtccacgacgagccgc 110 |||||||||||| |||||||||||| Sbjct: 30833043 gccatggctgtcgacgacgagccgc 30833019 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ccgacatggccgcgctcttc 181 |||||||||||||||||||| Sbjct: 33145992 ccgacatggccgcgctcttc 33146011
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.2 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 166 catggccgcgctcttcgccggccgcggcg 194 ||||||||||||||||||| ||||||||| Sbjct: 23840735 catggccgcgctcttcgcc-gccgcggcg 23840762
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 141 ccggccacctcatcccgatcgccga 165 ||||||||||||||||||| ||||| Sbjct: 8018644 ccggccacctcatcccgatggccga 8018620
>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0092C08 Length = 131049 Score = 42.1 bits (21), Expect = 2.2 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 166 catggccgcgctcttcgccggccgcggcg 194 ||||||||||||||||||| ||||||||| Sbjct: 129935 catggccgcgctcttcgcc-gccgcggcg 129962
>dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_H02 Length = 108603 Score = 42.1 bits (21), Expect = 2.2 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 166 catggccgcgctcttcgccggccgcggcg 194 ||||||||||||||||||| ||||||||| Sbjct: 32439 catggccgcgctcttcgcc-gccgcggcg 32466
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 141 ccggccacctcatcccgatcgccga 165 ||||||||||||||||||| ||||| Sbjct: 6837 ccggccacctcatcccgatggccga 6813
>dbj|AP005613.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0082C09 Length = 160665 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 141 ccggccacctcatcccgatcgccga 165 ||||||||||||||||||| ||||| Sbjct: 142059 ccggccacctcatcccgatggccga 142035
>dbj|AK107940.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-A12, full insert sequence Length = 769 Score = 42.1 bits (21), Expect = 2.2 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 166 catggccgcgctcttcgccggccgcggcg 194 ||||||||||||||||||| ||||||||| Sbjct: 124 catggccgcgctcttcgcc-gccgcggcg 151
>dbj|AK099648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065A21, full insert sequence Length = 2500 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 gccatggctgtccacgacgagccgc 110 |||||||||||| |||||||||||| Sbjct: 2255 gccatggctgtcgacgacgagccgc 2279
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 544 cgcgcgctcctgcagcgacagcatg 568 |||||||||||||||| |||||||| Sbjct: 1345791 cgcgcgctcctgcagccacagcatg 1345815
>ref|XM_474128.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2133 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ccgacatggccgcgctcttc 181 |||||||||||||||||||| Sbjct: 1138 ccgacatggccgcgctcttc 1119
>ref|XM_477282.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3746 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 ccgtcgtgcccttccccgacgtcg 326 |||||| ||||||||||||||||| Sbjct: 229 ccgtcgggcccttccccgacgtcg 206
>gb|AY596298.1| Haloarcula marismortui ATCC 43049 chromosome II, complete sequence Length = 288050 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 cgcatcgacgccgtcgtgtc 462 |||||||||||||||||||| Sbjct: 226118 cgcatcgacgccgtcgtgtc 226099
>gb|AF527807.1| Sorghum bicolor clone BAC SB_BBc0126P21 php200725 orthologous region Length = 75840 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 202 caccatcctcaccacgcccgtcaacgcc 229 ||||||| |||||||||||| ||||||| Sbjct: 67505 caccatcatcaccacgcccgccaacgcc 67478
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 595 ccccgacgaccccgacgccctcgt 618 ||||||||||| |||||||||||| Sbjct: 86791 ccccgacgaccgcgacgccctcgt 86814
>gb|AC009197.9| Drosophila melanogaster clone BACR14M08, complete sequence Length = 170053 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 591 acgcccccgacgaccccgacgccc 614 |||||||||||| ||||||||||| Sbjct: 4006 acgcccccgacgcccccgacgccc 4029
>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster Length = 109528 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 598 cgacgaccccgacgccctcg 617 |||||||||||||||||||| Sbjct: 63604 cgacgaccccgacgccctcg 63585
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 535 cagcatgttcgcgcgctcctgcag 558 |||||||| ||||||||||||||| Sbjct: 3013554 cagcatgtgcgcgcgctcctgcag 3013531
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 ccgcgctcttcgccggccgcggcg 194 ||||| |||||||||||||||||| Sbjct: 31921 ccgcgttcttcgccggccgcggcg 31898
>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12 Length = 273785 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 tcgccggcaccggctccccggcca 293 |||||| ||||||||||||||||| Sbjct: 67464 tcgccgccaccggctccccggcca 67441
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 cgacgccgccgcggagcgcg 506 |||||||||||||||||||| Sbjct: 1328333 cgacgccgccgcggagcgcg 1328352
>emb|Z79690.1|ANPFKA Aspergillus niger pfkA gene Length = 4658 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 acctcatcccgatcgccgac 166 |||||||||||||||||||| Sbjct: 4427 acctcatcccgatcgccgac 4408
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 172 cgcgctcttcgccggccgcggcgtccgg 199 ||||| ||||| |||||||||||||||| Sbjct: 29326 cgcgcacttcggcggccgcggcgtccgg 29353
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 172 cgcgctcttcgccggccgcggcgtccgg 199 ||||| ||||| |||||||||||||||| Sbjct: 323907 cgcgcacttcggcggccgcggcgtccgg 323934
>emb|AJ300302.1|SGR300302 Streptomyces griseus partial ORF1, canA gene, canC gene, canF gene, canT gene, canRA gene and canRB gene Length = 39314 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 ccgcgctcttcgccggccgcggcg 194 ||||| |||||||||||||||||| Sbjct: 26415 ccgcgttcttcgccggccgcggcg 26392
>emb|AJ223012.1|AMM223012 Amycolatopsis mediterranei genes encoding rifamycin polyketide synthases, ORFs 1 to 5 Length = 53784 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 598 cgacgaccccgacgccctcg 617 |||||||||||||||||||| Sbjct: 47199 cgacgaccccgacgccctcg 47180
>emb|BX323461.27| Zebrafish DNA sequence from clone DKEYP-44B8 in linkage group 23, complete sequence Length = 169310 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 601 cgaccccgacgccctcgttttgctgccg 628 ||||||| |||||||||||| ||||||| Sbjct: 167413 cgacccctacgccctcgtttagctgccg 167386
>gb|AE011956.1| Xanthomonas axonopodis pv. citri str. 306, section 334 of 469 of the complete genome Length = 10222 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 tgaccaccgcatcgacgccg 455 |||||||||||||||||||| Sbjct: 2302 tgaccaccgcatcgacgccg 2283
>gb|AE011887.1| Xanthomonas axonopodis pv. citri str. 306, section 265 of 469 of the complete genome Length = 13339 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 535 cagcatgttcgcgcgctcctgcag 558 |||||||| ||||||||||||||| Sbjct: 1767 cagcatgtgcgcgcgctcctgcag 1744
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 592 cgcccccgacgaccccgacgccct 615 ||||||||||| |||||||||||| Sbjct: 3548478 cgcccccgacgcccccgacgccct 3548455
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 atcgccgacatggccgcgct 177 |||||||||||||||||||| Sbjct: 964988 atcgccgacatggccgcgct 964969 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gcgccaacgactccttcgcc 274 |||||||||||||||||||| Sbjct: 687987 gcgccaacgactccttcgcc 687968
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gcctccggccacctcatccc 156 |||||||||||||||||||| Sbjct: 4466674 gcctccggccacctcatccc 4466655 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gcctccggccacctcatccc 156 |||||||||||||||||||| Sbjct: 2457069 gcctccggccacctcatccc 2457088
>gb|AY635845.1| Leishmania tropica hexokinase mRNA, partial cds Length = 1161 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 ggagaacgcccccgacgacc 605 |||||||||||||||||||| Sbjct: 378 ggagaacgcccccgacgacc 397
>gb|AY676310.1| Leishmania donovani hexokinase gene, partial cds Length = 1304 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 ggagaacgcccccgacgacc 605 |||||||||||||||||||| Sbjct: 378 ggagaacgcccccgacgacc 397
>gb|AY632240.1| Leishmania infantum hexokinase (HK) gene, partial cds Length = 1353 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 ggagaacgcccccgacgacc 605 |||||||||||||||||||| Sbjct: 378 ggagaacgcccccgacgacc 397
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 486 ccgacgccgccgcggagcgcggcgtcccgcgc 517 |||||| ||||||||||| ||||||| ||||| Sbjct: 7112820 ccgacggcgccgcggagcacggcgtcgcgcgc 7112789
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 ccgtcgtgcccttccccgacgtcg 326 |||||| ||||||||||||||||| Sbjct: 8528671 ccgtcgggcccttccccgacgtcg 8528648
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 gctgctccgggagcccttcg 422 |||||||||||||||||||| Sbjct: 4430793 gctgctccgggagcccttcg 4430774
>gb|AC008182.2|AC008182 Drosophila melanogaster, chromosome 2L, region 29F6-30A4, BAC clone BACR48E15, complete sequence Length = 192350 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 591 acgcccccgacgaccccgacgccc 614 |||||||||||| ||||||||||| Sbjct: 106106 acgcccccgacgcccccgacgccc 106083
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 591 acgcccccgacgaccccgacgccc 614 |||||||||||| ||||||||||| Sbjct: 2857449 acgcccccgacgcccccgacgccc 2857426 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 591 acgcccccgacgaccccgacgccc 614 |||||||||||| ||||||||||| Sbjct: 2857440 acgcccccgacgcccccgacgccc 2857417 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 591 acgcccccgacgaccccgacgccc 614 |||||||||||| ||||||||||| Sbjct: 2857431 acgcccccgacgcccccgacgccc 2857408 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 591 acgcccccgacgaccccgacgccc 614 |||||||||||| ||||||||||| Sbjct: 2857422 acgcccccgacgcccccgacgccc 2857399 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 591 acgcccccgacgaccccgacgccc 614 |||||||||||| ||||||||||| Sbjct: 2857413 acgcccccgacgcccccgacgccc 2857390 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 591 acgcccccgacgaccccgacgccc 614 |||||||||||| ||||||||||| Sbjct: 2857404 acgcccccgacgcccccgacgccc 2857381
>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster, complete sequence Length = 123580 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 595 ccccgacgaccccgacgccc 614 |||||||||||||||||||| Sbjct: 76170 ccccgacgaccccgacgccc 76189
>dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0005A05 Length = 162520 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 gctgctccgggagcccttcg 422 |||||||||||||||||||| Sbjct: 25523 gctgctccgggagcccttcg 25504
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 gctgctccgggagcccttcg 422 |||||||||||||||||||| Sbjct: 78474 gctgctccgggagcccttcg 78455
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 tgccgacgccgccgcggagc 503 |||||||||||||||||||| Sbjct: 470638 tgccgacgccgccgcggagc 470657
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 485 gccgacgccgccgcggagcgcggc 508 |||||||||||||| ||||||||| Sbjct: 4304439 gccgacgccgccgccgagcgcggc 4304416 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 485 gccgacgccgccgcggagcgcggc 508 |||||||||||||| ||||||||| Sbjct: 3310343 gccgacgccgccgccgagcgcggc 3310320 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 485 gccgacgccgccgcggagcgcggc 508 |||||||||||||| ||||||||| Sbjct: 1428976 gccgacgccgccgccgagcgcggc 1428999 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 485 gccgacgccgccgcggagcgcggc 508 |||||||||||||| ||||||||| Sbjct: 1086794 gccgacgccgccgccgagcgcggc 1086771
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 598 cgacgaccccgacgccctcg 617 |||||||||||||||||||| Sbjct: 1479072 cgacgaccccgacgccctcg 1479091
>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0592C05 Length = 150478 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 486 ccgacgccgccgcggagcgcggcgtcccgcgc 517 |||||| ||||||||||| ||||||| ||||| Sbjct: 64899 ccgacggcgccgcggagcacggcgtcgcgcgc 64868
>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0669H03 Length = 167878 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 ccgtcgtgcccttccccgacgtcg 326 |||||| ||||||||||||||||| Sbjct: 61139 ccgtcgggcccttccccgacgtcg 61116
>dbj|AK119889.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-A02, full insert sequence Length = 2554 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ccgacatggccgcgctcttc 181 |||||||||||||||||||| Sbjct: 1167 ccgacatggccgcgctcttc 1148
>dbj|AK120146.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028L17, full insert sequence Length = 2491 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ccgacatggccgcgctcttc 181 |||||||||||||||||||| Sbjct: 1137 ccgacatggccgcgctcttc 1118
>dbj|AK119579.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-B11, full insert sequence Length = 2001 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ccgacatggccgcgctcttc 181 |||||||||||||||||||| Sbjct: 680 ccgacatggccgcgctcttc 661
>dbj|AK099735.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090G16, full insert sequence Length = 2064 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 ccgtcgtgcccttccccgacgtcg 326 |||||| ||||||||||||||||| Sbjct: 229 ccgtcgggcccttccccgacgtcg 206
>dbj|AK100914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133D04, full insert sequence Length = 3746 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 ccgtcgtgcccttccccgacgtcg 326 |||||| ||||||||||||||||| Sbjct: 229 ccgtcgggcccttccccgacgtcg 206
>dbj|AK100096.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004B22, full insert sequence Length = 2556 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ccgacatggccgcgctcttc 181 |||||||||||||||||||| Sbjct: 1234 ccgacatggccgcgctcttc 1215
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 atcgccgacatggccgcgct 177 |||||||||||||||||||| Sbjct: 671141 atcgccgacatggccgcgct 671122
>gb|AY659996.1| Leishmania donovani hemoglobin receptor mRNA, complete cds Length = 1416 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 ggagaacgcccccgacgacc 605 |||||||||||||||||||| Sbjct: 429 ggagaacgcccccgacgacc 448
>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete sequence Length = 118971 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ccgacatggccgcgctcttc 181 |||||||||||||||||||| Sbjct: 36375 ccgacatggccgcgctcttc 36394
>gb|AE003623.2| Drosophila melanogaster chromosome 2L, section 32 of 83 of the complete sequence Length = 234635 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 591 acgcccccgacgaccccgacgccc 614 |||||||||||| ||||||||||| Sbjct: 132240 acgcccccgacgcccccgacgccc 132263
>gb|AF080235.1|AF080235 Streptomyces cyanogenus landomycin biosynthetic gene cluster, complete sequence Length = 34644 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tcgccgacatggccgcgctc 178 |||||||||||||||||||| Sbjct: 21387 tcgccgacatggccgcgctc 21406
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gccggccgcggcgtccggtg 201 |||||||||||||||||||| Sbjct: 957311 gccggccgcggcgtccggtg 957330
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ccgacatggccgcgctcttc 181 |||||||||||||||||||| Sbjct: 28642 ccgacatggccgcgctcttc 28661
>emb|AL929212.8| Mouse DNA sequence from clone RP23-65G6 on chromosome 2, complete sequence Length = 255261 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 tcctcttcttcccgttcctg 136 |||||||||||||||||||| Sbjct: 172432 tcctcttcttcccgttcctg 172451
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 435 ctgaccaccgcatcgacgccgtcg 458 |||||||| ||||||||||||||| Sbjct: 1517171 ctgaccacggcatcgacgccgtcg 1517194
>emb|AJ422120.1|CGI422120 Crassostrea gigas partial mRNA for multixenobiotic resistance protein 1 (mdr1 gene) Length = 347 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 accggttcctggctgaccac 442 |||||||||||||||||||| Sbjct: 161 accggttcctggctgaccac 142 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,969,366 Number of Sequences: 3902068 Number of extensions: 3969366 Number of successful extensions: 86165 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81219 Number of HSP's gapped (non-prelim): 4918 length of query: 631 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 608 effective length of database: 17,143,297,704 effective search space: 10423125004032 effective search space used: 10423125004032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
