Clone Information

BLAST Search Result

Clone Name	bart53h08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RSP5_CAEEL (Q10021) Probable splicing factor, arginine/serine-ri...	39	0.002
2	JPH1_RABIT (Q9GKY8) Junctophilin-1 (Junctophilin type 1) (JP-1) ...	38	0.007
3	STOX1_HUMAN (Q6ZVD7) Storkhead-box protein 1 (Winged helix domai...	32	0.30
4	JPH1_HUMAN (Q9HDC5) Junctophilin-1 (Junctophilin type 1) (JP-1)	31	0.67
5	SFR12_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12 (S...	31	0.67
6	SFR12_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12 (S...	31	0.67
7	PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-c...	31	0.87
8	RSP2_CAEEL (Q23120) Probable splicing factor, arginine/serine-ri...	30	1.1
9	RSP1_CAEEL (Q23121) Probable splicing factor, arginine/serine-ri...	30	1.1
10	GLCA_SOYBN (P13916) Beta-conglycinin, alpha chain precursor	30	1.5
11	NO12A_PEA (P20799) Early nodulin 12A precursor (N-12A)	30	1.9
12	SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1	30	1.9
13	P60_LISWE (Q01839) Protein p60 precursor (Invasion-associated pr...	30	1.9
14	NO75_SOYBN (P08297) Early nodulin 75 precursor (N-75) (NGM-75)	29	2.5
15	FKBP3_DEBHA (Q6BSE7) FK506-binding protein 3 (EC 5.2.1.8) (Pepti...	29	2.5
16	RK2_PANGI (Q68RU2) Chloroplast 50S ribosomal protein L2	29	2.5
17	POLS_EEVVP (P36332) Structural polyprotein (p130) [Contains: Cap...	29	2.5
18	SPD2_CAEEL (P91870) Spindle-defective protein 2	29	2.5
19	TAT_HV1OY (P20893) TAT protein (Transactivating regulatory protein)	29	2.5
20	LAMC1_DROME (P15215) Laminin gamma-1 chain precursor (Laminin B2...	29	3.3
21	CACB3_RAT (P54287) Voltage-dependent L-type calcium channel beta...	29	3.3
22	CACB3_HUMAN (P54284) Voltage-dependent L-type calcium channel be...	29	3.3
23	MRTFB_XENLA (Q8AYC1) Myocardin-related transcription factor B (M...	29	3.3
24	CACB3_RABIT (P54286) Voltage-dependent L-type calcium channel be...	29	3.3
25	LC7L2_MOUSE (Q7TNC4) Putative RNA-binding protein Luc7-like 2 (C...	29	3.3
26	LC7L2_HUMAN (Q9Y383) Putative RNA-binding protein Luc7-like 2	29	3.3
27	GUSL3_HUMAN (Q15487) Beta-glucuronidase-like protein SMA4	29	3.3
28	GUSL2_HUMAN (Q15486) Beta-glucuronidase-like protein SMA3	29	3.3
29	GUSL1_HUMAN (Q9NQQ0) Beta-glucuronidase-like protein 1 (SMA3-lik...	29	3.3
30	SFR12_RAT (Q9JKL7) Splicing factor, arginine/serine-rich 12 (Ser...	29	3.3
31	HXA11_MOUSE (P31311) Homeobox protein Hox-A11 (Hox-1.9)	29	3.3
32	VP40_EBV (P03234) Capsid protein P40 (Virion structural protein ...	29	3.3
33	TAT_HV1Y2 (P35965) TAT protein (Transactivating regulatory protein)	29	3.3
34	SWP1_ENCCU (Q9XZV1) Spore wall protein 1 precursor	28	4.3
35	PACC_GIBFU (Q8J1U9) pH-response transcription factor pacC/RIM101	28	4.3
36	OTX1L_BRARE (Q90267) Homeobox protein Otx1l (ZOTX3)	28	4.3
37	HXD11_HUMAN (P31277) Homeobox protein Hox-D11 (Hox-4F)	28	4.3
38	CACB3_BOVIN (Q9MZL3) Voltage-dependent L-type calcium channel be...	28	4.3
39	NO75_LUPLU (Q06841) Early nodulin 75 protein (N-75) (NGM-75) (Fr...	28	4.3
40	YACF_SALTY (P67693) UPF0289 protein yacF	28	4.3
41	YACF_SALTI (P67694) UPF0289 protein yacF	28	4.3
42	YACF_SALPA (Q5PDD7) UPF0289 protein yacF	28	4.3
43	PMA2_SCHPO (P28876) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proto...	28	4.3
44	CCNL1_CHICK (Q5ZJP9) Cyclin-L1	28	4.3
45	RK2_PINKO (Q85WS5) Chloroplast 50S ribosomal protein L2	28	4.3
46	ZNF79_HUMAN (Q15937) Zinc finger protein 79 (ZNFpT7)	28	5.6
47	PIN4_ORYSA (Q6ZIB5) Probable auxin efflux carrier component 4 (O...	28	5.6
48	MDC1_PIG (Q767L8) Mediator of DNA damage checkpoint protein 1	28	5.6
49	RK2_SPIOL (P06509) Chloroplast 50S ribosomal protein L2 (Ribosom...	28	5.6
50	BRCA1_PANTR (Q9GKK8) Breast cancer type 1 susceptibility protein...	28	5.6
51	BRCA1_HUMAN (P38398) Breast cancer type 1 susceptibility protein...	28	5.6
52	BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein...	28	5.6
53	SYIM_MACFA (Q4R646) Isoleucyl-tRNA synthetase, mitochondrial pre...	28	5.6
54	RK2_EPIVI (P30065) Plastid 50S ribosomal protein L2	28	5.6
55	P53_PLAFE (O12946) Cellular tumor antigen p53 (Tumor suppressor ...	28	5.6
56	RAD9B_RAT (Q499V3) Cell cycle checkpoint control protein RAD9B h...	28	7.4
57	MKL2_HUMAN (Q9ULH7) MKL/myocardin-like protein 2 (Myocardin-rela...	28	7.4
58	POLN_EEEV8 (Q306W8) Nonstructural polyprotein (Polyprotein nsP12...	28	7.4
59	UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Unco...	28	7.4
60	BRCA1_PONPY (Q6J6J0) Breast cancer type 1 susceptibility protein...	28	7.4
61	SEM1A_DROME (Q24322) Semaphorin-1A precursor (Semaphorin-I) (Sem...	28	7.4
62	SMRC1_HUMAN (Q92922) SWI/SNF-related matrix-associated actin-dep...	28	7.4
63	APLP1_MOUSE (Q03157) Amyloid-like protein 1 precursor (APLP) (AP...	28	7.4
64	RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2	28	7.4
65	PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior...	28	7.4
66	SWR1_GIBZE (Q4IAK7) Helicase SWR1 (EC 3.6.1.-)	28	7.4
67	YOCH_BACSU (O34669) Protein yocH precursor	28	7.4
68	SPY1_MOUSE (Q9QXV9) Sprouty homolog 1 (Spry-1)	28	7.4
69	RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-ri...	28	7.4
70	BMP2K_MOUSE (Q91Z96) BMP-2-inducible protein kinase (EC 2.7.11.1...	28	7.4
71	MDG1_YEAST (P53885) Signal transduction protein MDG1 (Multicopy ...	28	7.4
72	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	28	7.4
73	TAT_HV1SC (P05906) TAT protein (Transactivating regulatory protein)	28	7.4
74	JAG1B_BRARE (Q90Y54) Jagged-1b precursor (Jagged1b) (Jagged3)	27	9.6
75	CACB3_MOUSE (P54285) Voltage-dependent L-type calcium channel be...	27	9.6
76	ZN228_HUMAN (Q9UJU3) Zinc finger protein 228	27	9.6
77	RSC30_YEAST (P38781) Chromatin structure remodeling complex prot...	27	9.6
78	RK2_ORYSA (P17351) Chloroplast 50S ribosomal protein L2	27	9.6
79	RK2_ORYNI (Q6EN83) Chloroplast 50S ribosomal protein L2	27	9.6
80	RK2_HORVU (P41096) Chloroplast 50S ribosomal protein L2	27	9.6
81	MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor (...	27	9.6
82	TLE1_HUMAN (Q04724) Transducin-like enhancer protein 1 (ESG1) (E...	27	9.6
83	SMP1L_BOVIN (Q5EA00) Stromal membrane-associated protein 1-like	27	9.6
84	RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2	27	9.6
85	UDB3_RAT (P08542) UDP-glucuronosyltransferase 2B3 precursor (EC ...	27	9.6
86	CAC1S_RAT (Q02485) Voltage-dependent L-type calcium channel alph...	27	9.6
87	IF2_OCEIH (Q8EQU1) Translation initiation factor IF-2	27	9.6
88	TAT_HV1JR (P20879) TAT protein (Transactivating regulatory protein)	27	9.6

>RSP5_CAEEL (Q10021) Probable splicing factor, arginine/serine-rich 5|
           (RNA-binding protein srp-3) (CeSC35-2)
          Length = 208

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 21/74 (28%), Positives = 36/74 (48%)
 Frame = +3

Query: 72  RNGGSPPHKKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSY 251
           R   +PP +++    R ++ +   R   +  +   ES+RRS +   SPKR  K E   S 
Sbjct: 96  RRSRTPPRRRSRSRDRKRSRRSRSRSSSRSRSPVRESRRRSESRSPSPKRDLKREASRSR 155

Query: 252 CRLHTEERAIRRAG 293
             L  ++R+  R+G
Sbjct: 156 SPLPAKDRSRTRSG 169

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>JPH1_RABIT (Q9GKY8) Junctophilin-1 (Junctophilin type 1) (JP-1)|
           (Mitsugumin-72) (Mg72)
          Length = 662

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
 Frame = +3

Query: 84  SPPHKKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYCRLH 263
           +P  K       PK     +RKG     + + S + S + Q SP +  K + P S  RL+
Sbjct: 437 NPEEKVPAKPPTPKESPHFYRKGTTPPGSPEASPKYSRSPQPSPPKPAKKQNPSSGARLN 496

Query: 264 TEERAIRR----AGYNYQIASKINTEEI 335
            ++R +      A  N  + SK  T+E+
Sbjct: 497 QDKRGVAEEQVTAIVNKPLTSKAPTKEV 524

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>STOX1_HUMAN (Q6ZVD7) Storkhead-box protein 1 (Winged helix domain-containing|
           protein)
          Length = 989

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 212 TQEIDKARATTELLQASHRGAGHKASWLQ 298
           TQ++ +A    E+ + SHRG G   SW+Q
Sbjct: 252 TQDVQEAPVAAEVTRKSHRGLGESVSWVQ 280

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>JPH1_HUMAN (Q9HDC5) Junctophilin-1 (Junctophilin type 1) (JP-1)|
          Length = 661

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
 Frame = +3

Query: 96  KKNIPEA--RPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYCRLHTE 269
           ++ +PE    PK     +RKG     + + S + S +  +SPK   K + P S  RL+ +
Sbjct: 439 EEKVPEKPPTPKESPHFYRKGTTPPRSPEASPKHSHSPASSPK-PLKKQNPSSGARLNQD 497

Query: 270 ERAIR----RAGYNYQIASKINTEE 332
           +R++      A  N  + SK  T+E
Sbjct: 498 KRSVADEQVTAIVNKPLMSKAPTKE 522

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>SFR12_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12|
           (Serine-arginine-rich splicing regulatory protein 86)
           (SRrp86)
          Length = 494

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = +3

Query: 120 PKNEQQNFRKGGQDSATHDESKRRSPT-SQTSPKRSTKHEQPPSYCRLHTEERAIRRAGY 296
           P++ + N RKGG+ S +H  SK RS + S +  KRS    +  S+ R  + ++  RR+  
Sbjct: 182 PESGKSNERKGGR-SRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKS 240

Query: 297 NYQIASK 317
            ++  SK
Sbjct: 241 PHKKRSK 247

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>SFR12_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12|
           (Serine-arginine-rich splicing regulatory protein 86)
           (SRrp86) (Splicing regulatory protein 508) (SRrp508)
          Length = 508

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = +3

Query: 120 PKNEQQNFRKGGQDSATHDESKRRSPT-SQTSPKRSTKHEQPPSYCRLHTEERAIRRAGY 296
           P++ + N RKGG+ S +H  SK RS + S +  KRS    +  S+ R  + ++  RR+  
Sbjct: 179 PESGKSNERKGGR-SRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKS 237

Query: 297 NYQIASK 317
            ++  SK
Sbjct: 238 PHKKRSK 244

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>PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-containing|
            protein 2) (Plakophilin-related armadillo repeat
            protein-interacting PDZ protein)
          Length = 2766

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +3

Query: 78   GGSPPHKKNIPEA--RPKNEQQNF-RKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPP 245
            GG+PP   ++P +   PKN  +   RK    S +  + + R PT   SP+    H  PP
Sbjct: 997  GGTPPKVASLPGSGETPKNGPRGSGRKEMSGSRSSPKLEYRVPTDTQSPRSPENHTSPP 1055

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>RSP2_CAEEL (Q23120) Probable splicing factor, arginine/serine-rich 2|
           (RNA-binding protein srp-4) (CeSRp40)
          Length = 281

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 15/84 (17%)
 Frame = +3

Query: 84  SPPHKKNIPEA---------------RPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPK 218
           S  HK+N+ +A               + + E  N RK      T D S+ RSP  ++  +
Sbjct: 142 SEAHKRNVNQAIVCFTSHDDLRDAMNKLQGEDLNGRKLKCTDETRDRSRSRSPRRRSRSR 201

Query: 219 RSTKHEQPPSYCRLHTEERAIRRA 290
             T+   PP+  R    +R+ R++
Sbjct: 202 SPTRSRSPPARRRSPGSDRSDRKS 225

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>RSP1_CAEEL (Q23121) Probable splicing factor, arginine/serine-rich 1|
           (RNA-binding protein srp-5) (CeSRp75)
          Length = 312

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/73 (26%), Positives = 33/73 (45%)
 Frame = +3

Query: 72  RNGGSPPHKKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSY 251
           R+      +   P  R + E ++  +    S + D  K RSP+   SPK+  +   PP  
Sbjct: 229 RSSSRSKSRSRSPPKRSRRESKSKSRSRSRSRSADNRKSRSPSR--SPKKVDRSPSPPRG 286

Query: 252 CRLHTEERAIRRA 290
            R  +E+ + RR+
Sbjct: 287 SRSPSEKGSPRRS 299

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>GLCA_SOYBN (P13916) Beta-conglycinin, alpha chain precursor|
          Length = 605

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +3

Query: 108 PEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQ 239
           P  RP++ ++  ++ G+     DE  R  P  +  P++  +HEQ
Sbjct: 76  PRPRPQHPEREPQQPGEKEEDEDEQPRPIPFPRPQPRQEEEHEQ 119

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>NO12A_PEA (P20799) Early nodulin 12A precursor (N-12A)|
          Length = 110

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 17/65 (26%), Positives = 27/65 (41%)
 Frame = +3

Query: 87  PPHKKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYCRLHT 266
           PP K+      P+ E    +   ++   H   ++  P  +   K+S  H   PSY +  T
Sbjct: 44  PPQKETPVHKPPQKETPVHKPPQKEPPRHKPPQKEPPRHKPPHKKSHLHVTKPSYGKHPT 103

Query: 267 EERAI 281
           EE  I
Sbjct: 104 EEHNI 108

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>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +3

Query: 72  RNGGSP-PHKKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPP 245
           R   SP P+K++ P  RP+  Q +     +  A+    +R+SP+  T P R       P
Sbjct: 685 REARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEP 743

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>P60_LISWE (Q01839) Protein p60 precursor (Invasion-associated protein)|
          Length = 524

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 20/72 (27%), Positives = 34/72 (47%)
 Frame = +1

Query: 61  KAQQGTEGPHLIRRTSPRHDQKMSSKTSVKEVKTRQLMMKANAVLQLHKPHPRDRQSTSN 240
           KA+  TE P + + TS    ++ ++ T  KEV T+       A  Q  KP P    + + 
Sbjct: 250 KAEVKTEAPAVEKETSTPVVKENTNTTVKKEVTTQTQTNTTKAPAQAAKPAPAPAPAPTV 309

Query: 241 HRATAGFTPRSG 276
           +   + +T +SG
Sbjct: 310 NTNASTYTVKSG 321

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>NO75_SOYBN (P08297) Early nodulin 75 precursor (N-75) (NGM-75)|
          Length = 309

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +3

Query: 87  PPHKKNIPEARPKNEQQNFR-KGGQDSATHDE--SKRRSPTSQTSPKRSTKHEQPP 245
           PPH+K  PE +P +E+     +  Q+   H++   + + P  +  P+    HE+PP
Sbjct: 193 PPHEKPPPEYQPPHEKPPPEYQPPQEKPPHEKPPPEYQPPHEKPPPEHQPPHEKPP 248



 Score = 28.9 bits (63), Expect = 3.3
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +3

Query: 87  PPHKKNIPEARPKNEQQNFRKGGQDSATHDES--KRRSPTSQTSPKRSTKHEQPP 245
           PPH+K  PE +P +E+        +     E   + + P  +  P+    HE+PP
Sbjct: 91  PPHEKPPPEYQPPHEKPPHENPPPEHQPPHEKPPEHQPPHEKPPPEYEPPHEKPP 145



 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +3

Query: 87  PPHKKNIPEARPKNEQ--QNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPP 245
           PPH+K  PE  P +E+    ++   +     +      P  +  P+    HE+PP
Sbjct: 80  PPHEKPPPEYLPPHEKPPPEYQPPHEKPPHENPPPEHQPPHEKPPEHQPPHEKPP 134



 Score = 28.5 bits (62), Expect = 4.3
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +3

Query: 87  PPHKKNIPEARPKNEQQNFRKGGQDS--ATHDESKRRSPTSQTSPKRSTKHEQPP 245
           PPH+K  PE +P +E+    +   +     +     + P     P+    HE+PP
Sbjct: 172 PPHEKPPPEHQPPHEKPPEHQPPHEKPPPEYQPPHEKPPPEYQPPQEKPPHEKPP 226



 Score = 28.5 bits (62), Expect = 4.3
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +3

Query: 87  PPHKKNIPEARPKNEQQNFRKGGQDSATHDE-SKRRSPTSQTSPKRSTKHEQPP 245
           PPH+K  PE +P +E    +   +    H++  + + P  +  P+    HE+PP
Sbjct: 161 PPHEKPPPEYQPPHE----KPPPEHQPPHEKPPEHQPPHEKPPPEYQPPHEKPP 210



 Score = 28.1 bits (61), Expect = 5.6
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 87  PPHKKNIPEARPKNEQQNFRKGGQDSATHDE-SKRRSPTSQTSPKRSTKHEQPP 245
           PPH+K  PE +P +E    +   +    H++      P  +  P+    HE+PP
Sbjct: 150 PPHEKPPPEYQPPHE----KPPPEYQPPHEKPPPEHQPPHEKPPEHQPPHEKPP 199



 Score = 28.1 bits (61), Expect = 5.6
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +3

Query: 87  PPHKKNIPEARPKNEQQNFRKGGQDSATHDE--SKRRSPTSQTSPKRSTKHEQPPSY 251
           PPH+K  PE +P +E    +   +    H++   + + P  +  P+    HE+PP +
Sbjct: 139 PPHEKPPPEYQPPHE----KPPPEYQPPHEKPPPEYQPPHEKPPPEHQPPHEKPPEH 191

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>FKBP3_DEBHA (Q6BSE7) FK506-binding protein 3 (EC 5.2.1.8) (Peptidyl-prolyl|
           cis-trans isomerase) (PPIase) (Rotamase)
          Length = 437

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 129 EQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQP 242
           E++  +KG ++ A  +E K+  P  +   K   K EQP
Sbjct: 280 EEKTEKKGKKEKAKKEEPKKEEPKKEQPKKEQPKKEQP 317

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>RK2_PANGI (Q68RU2) Chloroplast 50S ribosomal protein L2|
          Length = 274

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = +2

Query: 143 P*RRSRLGNS**KQTPFSNFTNLTQEIDKARATTELLQASHRGAGHKASWLQLPDCKQDK 322
           P  R+R  +S  K  P +N         K R    ++ A HRG GHK  + ++   + +K
Sbjct: 11  PSTRNRAVDSQVKSNPRNNLIYGQHHCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEK 70

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>POLS_EEVVP (P36332) Structural polyprotein (p130) [Contains: Capsid protein|
           (EC 3.4.21.-) (Coat protein) (C); p62 (E3/E2); E3
           protein (Spike glycoprotein E3); E2 envelope
           glycoprotein (Spike glycoprotein E2); 6K protein; E1
           envelope glycoprotein (Spike g
          Length = 1255

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 16/79 (20%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = +3

Query: 108 PEARPKNEQQNFRKGG-QDSATHDESKRRSPTSQTSPKRSTKHEQPPSYCRLHTEERAIR 284
           P  +PK E    +KGG Q     ++ K+++ T   +PK  + +++ P+           +
Sbjct: 62  PAKKPKREAPQKQKGGGQGKKKKNQGKKKAKTGPPNPKAQSGNKKKPN-----------K 110

Query: 285 RAGYNYQIASKINTEEIIP 341
           + G   ++  K+ +++  P
Sbjct: 111 KPGKRQRMVMKLESDKTFP 129

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>SPD2_CAEEL (P91870) Spindle-defective protein 2|
          Length = 824

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
 Frame = +3

Query: 81  GSPPHKKN--IPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYC 254
           G+  H+KN  IP+AR K    +     +D+  +  +        TSP  ST H++  S  
Sbjct: 175 GNLNHRKNKLIPQARAKPGANDNEIVERDNDENVPTTSDKSAFITSPMNSTNHDEKTSTP 234

Query: 255 RLHTEERAIRRAGYNYQIAS 314
           +  T  +  +  G N+ ++S
Sbjct: 235 KRPTNRKIGQYQGPNFDLSS 254

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>TAT_HV1OY (P20893) TAT protein (Transactivating regulatory protein)|
          Length = 101

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = +3

Query: 96  KKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQ-----TSPKRSTK 230
           KK +  +  + +++  R+  QDS TH  S  + P SQ     T PK S K
Sbjct: 40  KKGLGISYGRKKRRQRRRAPQDSKTHQVSLSKQPASQPRGDPTGPKESKK 89

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>LAMC1_DROME (P15215) Laminin gamma-1 chain precursor (Laminin B2 chain)|
          Length = 1639

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 251 LQASHRGA-GHKASWLQLPDCKQDKYRGNYSE 343
           LQ +HRGA GH A+W++   C +  Y G + E
Sbjct: 692 LQTAHRGAAGHPATWIEQCTCPEG-YLGQFCE 722

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>CACB3_RAT (P54287) Voltage-dependent L-type calcium channel beta-3 subunit|
           (CAB3) (Calcium channel, voltage-dependent, beta 3
           subunit)
          Length = 484

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +3

Query: 90  PHKKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSY 251
           P  + +   R K EQ+  R+ G  S+  D   RRSP    + ++  + E  P Y
Sbjct: 119 PSPQRLESIRLKQEQKA-RRSGNPSSLSDIGNRRSPPPSLAKQKQKQAEHVPPY 171

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>CACB3_HUMAN (P54284) Voltage-dependent L-type calcium channel beta-3 subunit|
           (CAB3) (Calcium channel, voltage-dependent, beta 3
           subunit)
          Length = 484

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +3

Query: 90  PHKKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSY 251
           P  + +   R K EQ+  R+ G  S+  D   RRSP    + ++  + E  P Y
Sbjct: 119 PSPQRLESIRLKQEQKA-RRSGNPSSLSDIGNRRSPPPSLAKQKQKQAEHVPPY 171

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>MRTFB_XENLA (Q8AYC1) Myocardin-related transcription factor B (MRTF-B)|
           (xMRTF-B)
          Length = 1067

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +1

Query: 82  GPHLIRRTSPRHDQKMSSKTSVKEVKTRQLMMK 180
           GP LI++T P+H +K  SK S K+ K R   +K
Sbjct: 258 GPALIKQTQPKHTEKPRSKKS-KDPKPRVKKLK 289

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>CACB3_RABIT (P54286) Voltage-dependent L-type calcium channel beta-3 subunit|
           (CAB3) (Calcium channel, voltage-dependent, beta 3
           subunit)
          Length = 477

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +3

Query: 90  PHKKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSY 251
           P  + +   R K EQ+  R+ G  S+  D   RRSP    + ++  + E  P Y
Sbjct: 119 PSPQRLESIRLKQEQKA-RRSGNPSSLSDIGNRRSPPPSLAKQKQKQAEHVPPY 171

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>LC7L2_MOUSE (Q7TNC4) Putative RNA-binding protein Luc7-like 2 (CGI-74 homolog)|
          Length = 392

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = +3

Query: 96  KKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYCRLHTEER 275
           K+ + E + K  Q+  ++  +      E  RRS +   +PKRS   E      R  + ER
Sbjct: 229 KRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRER 288

Query: 276 AIR 284
             R
Sbjct: 289 KRR 291

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>LC7L2_HUMAN (Q9Y383) Putative RNA-binding protein Luc7-like 2|
          Length = 392

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = +3

Query: 96  KKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYCRLHTEER 275
           K+ + E + K  Q+  ++  +      E  RRS +   +PKRS   E      R  + ER
Sbjct: 229 KRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRER 288

Query: 276 AIR 284
             R
Sbjct: 289 KRR 291

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>GUSL3_HUMAN (Q15487) Beta-glucuronidase-like protein SMA4|
          Length = 140

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 330 PRYLSCLQSGNCNQLALWPAPRCEAC 253
           P YL   + G+C+  +L P P C+ C
Sbjct: 72  PAYLYSWEDGDCSHQSLGPLPACDLC 97

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>GUSL2_HUMAN (Q15486) Beta-glucuronidase-like protein SMA3|
          Length = 140

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 330 PRYLSCLQSGNCNQLALWPAPRCEAC 253
           P YL   + G+C+  +L P P C+ C
Sbjct: 72  PAYLYSWEDGDCSHQSLGPLPACDLC 97

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>GUSL1_HUMAN (Q9NQQ0) Beta-glucuronidase-like protein 1 (SMA3-like protein)|
          Length = 140

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 330 PRYLSCLQSGNCNQLALWPAPRCEAC 253
           P YL   + G+C+  +L P P C+ C
Sbjct: 72  PAYLYSWEDGDCSHQSLGPLPACDLC 97

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>SFR12_RAT (Q9JKL7) Splicing factor, arginine/serine-rich 12|
           (Serine-arginine-rich splicing regulatory protein 86)
           (SRrp86) (SR-related protein of 86 kDa)
          Length = 494

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = +3

Query: 120 PKNEQQNFRKGGQDSATHDESKRRSPT-SQTSPKRSTKHEQPPSYCRLHTEERAIRRAGY 296
           P++ + N RKGG+ S +H  SK RS + S +  KRS    +  S+ R  + ++   R+  
Sbjct: 182 PESGKSNERKGGR-SRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRARSKS 240

Query: 297 NYQIASK 317
            ++  SK
Sbjct: 241 PHKKRSK 247

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>HXA11_MOUSE (P31311) Homeobox protein Hox-A11 (Hox-1.9)|
          Length = 313

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 150 GGQDSATHDESKRRSPTSQTSPKRSTKHEQ 239
           G Q++A  ++ +RR P S +SP+ S+ H +
Sbjct: 201 GCQEAAAEEKERRRRPESSSSPESSSGHTE 230

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>VP40_EBV (P03234) Capsid protein P40 (Virion structural protein BVRF2)|
           (EC-RF3 and EC-RF3A) [Contains: Capsid protein VP24
           (Assemblin) (Protease) (EC 3.4.21.97); Capsid protein
           VP22A; C-terminal peptide]
          Length = 605

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
 Frame = +1

Query: 22  PPPLRAHQLVQVRKAQQGTEGP--HLIRRTS-----------PRHDQKMSSKTSVKEVKT 162
           PPP  +HQ  Q +    GT+ P  H +  ++           PR D      T+    + 
Sbjct: 503 PPPPTSHQAAQAQPPPPGTQAPEAHCVAESTIPEAGAAGNSGPREDTNPQQPTTEGHHRG 562

Query: 163 RQLMM-KANAVLQLHKPHPRDRQSTSNH 243
           ++L+   A+ V Q  +P     +S S H
Sbjct: 563 KKLVQASASGVAQSKEPTTPKAKSVSAH 590

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>TAT_HV1Y2 (P35965) TAT protein (Transactivating regulatory protein)|
          Length = 101

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = +3

Query: 96  KKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQ-----TSPKRSTK 230
           KK +  +  + +++  R+  QDS TH  S  + PTSQ     T P  S K
Sbjct: 40  KKGLGISYGRKKRRQRRRPPQDSQTHQSSLSKQPTSQLRGDPTGPTESKK 89

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>SWP1_ENCCU (Q9XZV1) Spore wall protein 1 precursor|
          Length = 450

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = +3

Query: 96  KKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQ 239
           K N+   R KN+ +     G  S  HDES   S +S     R  +H +
Sbjct: 38  KNNLLGRRFKNDVRKLCGDGMSSDVHDESSSHSSSSSDCKPRRRRHHR 85

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>PACC_GIBFU (Q8J1U9) pH-response transcription factor pacC/RIM101|
          Length = 618

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
 Frame = +3

Query: 84  SPPHKKNIPEARPKNEQQNFRKGGQDSATHDESKRRSP-------TSQTSPKRSTKHE 236
           SPP  +  P+ + + +QQ    G   S + ++SK  +P       TSQ+S   ST  +
Sbjct: 2   SPPAPEQKPQLQQQQQQQGSSSGDSSSGSANDSKSVTPAPSATSNTSQSSTAPSTSSD 59

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>OTX1L_BRARE (Q90267) Homeobox protein Otx1l (ZOTX3)|
          Length = 338

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
 Frame = +3

Query: 96  KKNIPEARP----KNEQQNFRKGGQDSATHDE----SKRRSPTSQTSPKRSTKHEQPPS 248
           K N+PE+R     KN +   R+  Q S+T+ +     K+ SP+ ++    S+ H  PP+
Sbjct: 74  KINLPESRVQVWFKNRRAKCRQQQQQSSTNSKIRPAKKKPSPSRESPGSESSGHFTPPA 132

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>HXD11_HUMAN (P31277) Homeobox protein Hox-D11 (Hox-4F)|
          Length = 338

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 18/66 (27%), Positives = 27/66 (40%)
 Frame = +3

Query: 78  GGSPPHKKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYCR 257
           GG  P  K  P + PK   +    GG       E+     +S  +P+RS K   P +  +
Sbjct: 220 GGGSPCTKATPGSEPKGAAEG--SGGDGEGPPGEAGAEKSSSAVAPQRSRKKRCPYTKYQ 277

Query: 258 LHTEER 275
           +   ER
Sbjct: 278 IRELER 283

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>CACB3_BOVIN (Q9MZL3) Voltage-dependent L-type calcium channel beta-3 subunit|
           (CAB3) (Calcium channel, voltage-dependent, beta 3
           subunit)
          Length = 484

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +3

Query: 90  PHKKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSY 251
           P  + +   R K EQ+  R+ G  S+  D   RRSP    + ++  + E  P Y
Sbjct: 119 PSPQRLESIRLKQEQKA-RRSGNPSSLSDIGSRRSPPPSLAKQKQKQAEHIPPY 171

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>NO75_LUPLU (Q06841) Early nodulin 75 protein (N-75) (NGM-75) (Fragment)|
          Length = 434

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = +3

Query: 84  SPPHKKNIPEARPKNEQQ--NFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYC 254
           +PPH+K   E  P + +    +    +   TH++     P  +  P     +E+PPS C
Sbjct: 312 APPHEKPPVEYPPPHVKPPVEYPSPAEKPPTHEKPPIEFPPHEKPPVYEPPYEKPPSVC 370

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>YACF_SALTY (P67693) UPF0289 protein yacF|
          Length = 247

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +2

Query: 191 FSNFTNLTQEIDKARATTELLQASHRGAGHKASWLQLPDCKQDK 322
           F N ++L    ++    TELL+   R      +W+++P   QD+
Sbjct: 44  FRNISDLLDVFERGEVRTELLKELERQQRKLQAWVEVPGVDQDR 87

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>YACF_SALTI (P67694) UPF0289 protein yacF|
          Length = 247

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +2

Query: 191 FSNFTNLTQEIDKARATTELLQASHRGAGHKASWLQLPDCKQDK 322
           F N ++L    ++    TELL+   R      +W+++P   QD+
Sbjct: 44  FRNISDLLDVFERGEVRTELLKELERQQRKLQAWVEVPGVDQDR 87

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>YACF_SALPA (Q5PDD7) UPF0289 protein yacF|
          Length = 247

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +2

Query: 191 FSNFTNLTQEIDKARATTELLQASHRGAGHKASWLQLPDCKQDK 322
           F N ++L    ++    TELL+   R      +W+++P   QD+
Sbjct: 44  FRNISDLLDVFERGEVRTELLKELERQQRKLQAWVEVPGVDQDR 87

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>PMA2_SCHPO (P28876) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)|
          Length = 1010

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +3

Query: 75  NGGSPPHKKNIPEARPKNEQQNFRKGGQDSATHD-ESKRRSPTSQTSPKRSTKHEQP 242
           +G + P     P     + QQ   + G  S TH+ +S  R   + TSP  S  HE+P
Sbjct: 58  SGNAAPRLTAAPNT---HAQQANLQSGNTSITHETQSTSRGQEATTSPSLSASHEKP 111

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>CCNL1_CHICK (Q5ZJP9) Cyclin-L1|
          Length = 534

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +3

Query: 120 PKNEQQNFRKGGQDSATHDESKRRSPTSQTSPK-RSTKHEQPPSYCRLHTEERA 278
           P N  Q  R+    S + D+S  RSP+   SPK R ++     S  + H+  R+
Sbjct: 383 PVNGVQKGRESRSRSGSRDQSYSRSPSRSASPKHRKSESYSTSSGSKSHSRSRS 436

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>RK2_PINKO (Q85WS5) Chloroplast 50S ribosomal protein L2|
          Length = 276

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 188 PFSNFTNLTQEIDKARATTELLQASHRGAGHKASWLQLPDCKQDK 322
           P    T+      K R    ++ A HRG GHK  + Q+ D ++DK
Sbjct: 29  PQKKLTSGQHHCGKGRNARGIITARHRGGGHKRLYRQI-DFRRDK 72

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>ZNF79_HUMAN (Q15937) Zinc finger protein 79 (ZNFpT7)|
          Length = 498

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 19/63 (30%), Positives = 26/63 (41%)
 Frame = +3

Query: 81  GSPPHKKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYCRL 260
           GSPP +  + EA  ++       G  D  T D  K  +     SP++    E  P  C  
Sbjct: 116 GSPPEQA-LSEASFQDPCVEMPPGDSDHGTSDLEKSFNLRPVLSPQQRVPVEARPRKCET 174

Query: 261 HTE 269
           HTE
Sbjct: 175 HTE 177

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>PIN4_ORYSA (Q6ZIB5) Probable auxin efflux carrier component 4 (OsPIN4)|
          Length = 370

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -2

Query: 288 LALWPAPRCEACSSSVVARALSISWVRFVKLENGVCFHHELPSLDLLYGSFAAHFLV 118
           +A W   RC   ++   A++ SI+      L N +     +P LD +YG +A   +V
Sbjct: 86  MAAWARTRCGCAAAKAGAQSWSITGFSLAALNNTLVV--GVPLLDAMYGRWAQDLVV 140

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>MDC1_PIG (Q767L8) Mediator of DNA damage checkpoint protein 1|
          Length = 2042

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
 Frame = +3

Query: 84   SPPHKKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPT-SQTSPKRSTKHEQPPSYCRL 260
            +P H   IP+      +  F    Q  AT    +  +P  S   PKR  + E PP    L
Sbjct: 1735 APAHAPQIPKVEAAG-RPGFTLEPQPKATQKRKRPLAPADSPPLPKRLQRGEVPPKTVIL 1793

Query: 261  HTEERAIRRAG 293
              EE    R G
Sbjct: 1794 EEEENPTARPG 1804

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>RK2_SPIOL (P06509) Chloroplast 50S ribosomal protein L2 (Ribosomal protein|
           CS-L4)
          Length = 271

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 179 KQTPFSNFTNLTQEIDKARATTELLQASHRGAGHKASWLQLPDCKQDK 322
           K  P +N  +  +   K R    ++ A HRG GHK  + ++   + +K
Sbjct: 20  KSNPRNNLISGQRRCGKGRNARGIITARHRGGGHKRLYRKIDFRRNEK 67

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>BRCA1_PANTR (Q9GKK8) Breast cancer type 1 susceptibility protein homolog|
          Length = 1863

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = +3

Query: 147 KGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYCRLHTEERAIRRAGYNYQIASKIN 323
           +G +D  + D +K+ +     +   +T+H QP +     TE+RA  R    YQ +S  N
Sbjct: 210 QGTRDEISLDSAKKAACEFSETDVTNTEHHQPSNNDLNTTEKRATERHPEKYQGSSVSN 268

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>BRCA1_HUMAN (P38398) Breast cancer type 1 susceptibility protein (RING finger|
           protein 53)
          Length = 1863

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = +3

Query: 147 KGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYCRLHTEERAIRRAGYNYQIASKIN 323
           +G +D  + D +K+ +     +   +T+H QP +     TE+RA  R    YQ +S  N
Sbjct: 210 QGTRDEISLDSAKKAACEFSETDVTNTEHHQPSNNDLNTTEKRAAERHPEKYQGSSVSN 268

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>BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein homolog|
          Length = 1863

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = +3

Query: 147 KGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYCRLHTEERAIRRAGYNYQIASKIN 323
           +G +D  + D +K+ +     +   +T+H QP +     TE+RA  R    YQ +S  N
Sbjct: 210 QGTRDEISLDSAKKAACEFSETDVTNTEHHQPSNNDLNTTEKRATERHPEKYQGSSVSN 268

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>SYIM_MACFA (Q4R646) Isoleucyl-tRNA synthetase, mitochondrial precursor (EC|
           6.1.1.5) (Isoleucine--tRNA ligase) (IleRS) (Fragment)
          Length = 993

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = -2

Query: 321 LSCLQSGNCNQLALWPAPRCEACSSSVVARALSISWVRFVKLENGVCFHHELP 163
           + C +SG+   LA   A + E  +S++     +IS    V LENG C H  +P
Sbjct: 302 VKCSKSGDLYVLA---ADKVETVASTLETAFETISTFSGVDLENGTCSHPLIP 351

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>RK2_EPIVI (P30065) Plastid 50S ribosomal protein L2|
          Length = 274

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/49 (26%), Positives = 20/49 (40%)
 Frame = +2

Query: 179 KQTPFSNFTNLTQEIDKARATTELLQASHRGAGHKASWLQLPDCKQDKY 325
           K  P  N         K R    ++   HRG GHK  + ++   + +KY
Sbjct: 23  KSNPRKNLIYGQHHCGKGRNVRGIITTRHRGGGHKRLYRKISFIRNEKY 71

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>P53_PLAFE (O12946) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 366

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 153 GQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYCRLHT 266
           G+D  T +ES  ++P     PK++ K +Q PS    HT
Sbjct: 254 GRDRKTDEESSTKTPNG---PKQTKKRKQAPSNSAPHT 288

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>RAD9B_RAT (Q499V3) Cell cycle checkpoint control protein RAD9B homolog (RAD9|
           homolog B)
          Length = 398

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -1

Query: 211 EVCEVGERRLLSS*VAES*PPLRKFCCSFFGRAS 110
           ++ EV E  +      +S  PLRKF C FFG  S
Sbjct: 339 DISEVPESVVSDMEEGQSPSPLRKFSCMFFGAVS 372

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>MKL2_HUMAN (Q9ULH7) MKL/myocardin-like protein 2 (Myocardin-related|
           transcription factor B) (MRTF-B) (Megakaryoblastic
           leukemia 2)
          Length = 1088

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 16/74 (21%), Positives = 30/74 (40%)
 Frame = +1

Query: 19  RPPPLRAHQLVQVRKAQQGTEGPHLIRRTSPRHDQKMSSKTSVKEVKTRQLMMKANAVLQ 198
           +PPP  A  ++          GP L++++ P++          K+ K R   +K      
Sbjct: 240 QPPPRPAAPVLPTNTVSSAKPGPALVKQSHPKNPNDKHRSKKCKDPKPRVKKLK------ 293

Query: 199 LHKPHPRDRQSTSN 240
            H+  P D++   N
Sbjct: 294 YHQYIPPDQKGEKN 307

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>POLN_EEEV8 (Q306W8) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2473

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
 Frame = +3

Query: 144  RKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYCRLHTE---ERAIRRAGYNYQIAS 314
            R GG ++ T    K           R+TK++QPP   R  +E   +  IRR    Y+  +
Sbjct: 1806 RVGGFETDTKRYDKTEEKPIPKPRTRTTKYKQPPGVARSISEAELDEFIRRHSNRYEAGA 1865

Query: 315  KINTEE 332
             I + E
Sbjct: 1866 YIFSSE 1871

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>UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoordinated protein|
            89)
          Length = 8081

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
 Frame = +3

Query: 84   SPPHKKNIPEARPKNEQQNFRKGGQDSA-----THDESKRRSPTS-QTSPKRSTKHEQPP 245
            SP  K+  PE     E ++  K  +  +     T DESK +SP   +  PK  T  + PP
Sbjct: 1807 SPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPP 1866

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>BRCA1_PONPY (Q6J6J0) Breast cancer type 1 susceptibility protein homolog|
          Length = 1863

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +3

Query: 147 KGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYCRLHTEERAIRRAGYNYQIASKIN 323
           +G  D  + D +K+ +     +   +T+H QP +     TE+RA  R    YQ +S  N
Sbjct: 210 QGTSDEISLDSAKKAACEFSETDVTNTEHHQPSNNDLNTTEKRATERHPEKYQGSSVSN 268

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>SEM1A_DROME (Q24322) Semaphorin-1A precursor (Semaphorin-I) (Sema I)|
          Length = 850

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +3

Query: 72  RNGGSPPHKKNIPEARPKNEQQNFRKGGQDSA-THDESKRRSPTSQTSPKRSTKH 233
           R+G    H+ N P+ + +  QQ     G     ++  S    P+S  SP+ S K+
Sbjct: 789 RHGIVTQHRSNSPQQQQQQSQQPHSSSGSSPVMSNSSSSPAPPSSSPSPQESPKN 843

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>SMRC1_HUMAN (Q92922) SWI/SNF-related matrix-associated actin-dependent regulator|
            of chromatin subfamily C member 1 (SWI/SNF complex 155
            kDa subunit) (BRG1-associated factor 155)
          Length = 1105

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/50 (28%), Positives = 20/50 (40%)
 Frame = +3

Query: 114  ARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYCRLH 263
            AR + EQQ   +  Q +  H      +P           H+QPP Y  +H
Sbjct: 954  ARQQMEQQQHGQNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMH 1003

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>APLP1_MOUSE (Q03157) Amyloid-like protein 1 precursor (APLP) (APLP-1)|
           [Contains: C30]
          Length = 653

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 177 HHELPSLDLLYGSFAAHFLVVPRGC 103
           HHE+     L G F +  L+VP GC
Sbjct: 131 HHEVVPFHCLPGEFVSEALLVPEGC 155

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>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2|
          Length = 326

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 8/59 (13%)
 Frame = +3

Query: 87  PPHKKNIPEARPKNEQQNFRKGGQDSATH--------DESKRRSPTSQTSPKRSTKHEQ 239
           P H+      R   E+   R+ G+ S TH        D    RS +   SP +S +H++
Sbjct: 250 PKHEHKSASRREAEEKSRERERGRSSGTHSGRHRGHSDGRSHRSRSRSRSPDKSHRHKK 308

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>PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior sex combs)|
          Length = 1601

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +3

Query: 87   PPHKK--NIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPP 245
            PP KK  N   A  ++ QQ    GGQ      ++   +  +Q   K+ +K+  PP
Sbjct: 1338 PPSKKSPNAGAAAHQSGQQKLVNGGQSQPAQQKTSPPAQKNQQQVKKVSKNPTPP 1392

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>SWR1_GIBZE (Q4IAK7) Helicase SWR1 (EC 3.6.1.-)|
          Length = 1691

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 15/62 (24%), Positives = 29/62 (46%)
 Frame = +3

Query: 99  KNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYCRLHTEERA 278
           K  P + PK+     +K  +   +   ++RRSPT    PK ST+  +   +     ++ A
Sbjct: 172 KQAPASTPKSAS---KKPTETRTSSRSTRRRSPTPPPPPKNSTRSRRSARFSDAVIKDEA 228

Query: 279 IR 284
           ++
Sbjct: 229 VQ 230

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>YOCH_BACSU (O34669) Protein yocH precursor|
          Length = 287

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 23/72 (31%), Positives = 34/72 (47%)
 Frame = +3

Query: 102 NIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYCRLHTEERAI 281
           N P+A PK E     +  Q++             Q  PK+ TK E   S   ++TEE+A+
Sbjct: 138 NAPQAAPKQEAVQKEQPKQEAV------------QQQPKQETKAEAETS---VNTEEKAV 182

Query: 282 RRAGYNYQIASK 317
            ++  N Q ASK
Sbjct: 183 -QSNTNNQEASK 193

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>SPY1_MOUSE (Q9QXV9) Sprouty homolog 1 (Spry-1)|
          Length = 313

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = +1

Query: 31  LRAHQLVQVRKAQQGTEGPHLIRRTSPRHDQKMSSKTSVKEVKTRQLMMKANAVLQLHKP 210
           L   Q+  +R + + TEGP + RR +PR     ++    K+ +T +++         H+P
Sbjct: 39  LSLDQIKAIRGSNEYTEGPSVARRPAPR-----TAPRPEKQERTHEIIPANVNSSYEHRP 93

Query: 211 --HPRDRQSTSNHRATA 255
             HP + + +   R+T+
Sbjct: 94  ASHPGNARGSVLSRSTS 110

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>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)|
           (CeSF2/ASF)
          Length = 258

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +3

Query: 132 QQNFRKGGQDSATHDESKRRSPTSQ--TSPKRSTKHEQPPSYCRLHTEERAIRRA 290
           + N   GG      D S+ RSP ++   SPK S +  +  S  R  +  R+  R+
Sbjct: 196 EDNSSGGGSGGGGRDRSRSRSPRAERRASPKYSPRRSRSRSRSRSRSRSRSASRS 250

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>BMP2K_MOUSE (Q91Z96) BMP-2-inducible protein kinase (EC 2.7.11.1) (BIKe)|
          Length = 1138

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = +3

Query: 72  RNGGSPPHKKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQ 239
           +NGGS P  K+    +  +E    R  GQ    HD+S+    +   SPK S + ++
Sbjct: 697 KNGGSSPLCKDQRAGKKTSENPVIR--GQVQKGHDDSESDFESDPPSPKSSEEEQE 750

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>MDG1_YEAST (P53885) Signal transduction protein MDG1 (Multicopy suppressor of|
           defective G-protein 1)
          Length = 366

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 16/77 (20%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
 Frame = +3

Query: 117 RPKNEQQNFRKGGQDSATH-----DESKRRSPTSQTSPKRSTKHEQPPSYCRLHTEERAI 281
           + + E+   + GG+D++T       E + + P S+++     + + P S    H +E ++
Sbjct: 239 KEEEEEDEDKGGGKDTSTSADAEASEDQNKEPLSKSAKFEKPEEKVPVSSITSHAKETSV 298

Query: 282 RRAGYNYQIASKINTEE 332
           +  G   ++A++  T E
Sbjct: 299 KPTG---KVATETQTYE 312

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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +3

Query: 72  RNGGSP-PHKKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPP 245
           R   SP P+K++ P  RP+  Q +     +  A+     R+SP+  T P R       P
Sbjct: 690 REARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASASPQGRQSPSPSTRPIRRVSRTPEP 748

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>TAT_HV1SC (P05906) TAT protein (Transactivating regulatory protein)|
          Length = 101

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = +3

Query: 105 IPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQ-----TSPKRSTK 230
           I   R K  Q+  R+  QDS TH  S  + P SQ     T PK S K
Sbjct: 45  ISYGRKKRRQR--RRAPQDSQTHQVSLPKQPASQARGDPTGPKESKK 89

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>JAG1B_BRARE (Q90Y54) Jagged-1b precursor (Jagged1b) (Jagged3)|
          Length = 1213

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 318 SCLQSGNCNQLALWPAPRCEAC 253
           SC Q G C  L  W  P C+ C
Sbjct: 241 SCKQPGGCKCLYGWQGPYCDKC 262

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>CACB3_MOUSE (P54285) Voltage-dependent L-type calcium channel beta-3 subunit|
           (CAB3) (Calcium channel, voltage-dependent, beta 3
           subunit) (CCHB3)
          Length = 484

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +3

Query: 90  PHKKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPPSY 251
           P  + +   R K EQ+  R+ G  S+  D   RRSP    + ++  + E  P Y
Sbjct: 119 PSPQRLESIRLKQEQKA-RRSGNPSSLGDIGFRRSPPPSLAKQKQKQAEHVPPY 171

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>ZN228_HUMAN (Q9UJU3) Zinc finger protein 228|
          Length = 913

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +3

Query: 246 SYCRLHTEERAIR--RAGYNYQIASKINTEEII 338
           SY R+HTEE+  +    G N+   S +NT E+I
Sbjct: 320 SYQRVHTEEKPCKCGEYGENFNHCSPLNTYELI 352

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>RSC30_YEAST (P38781) Chromatin structure remodeling complex protein RSC30|
           (Remodel the structure of chromatin complex subunit 30)
          Length = 883

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +3

Query: 204 QTSPKRSTKHEQPPSYCRLHTEERAIRRAGYNYQIASKINTEEIIP 341
           + SP  +  H+Q    C+++   +AI     N +  + +N EE +P
Sbjct: 335 KVSPPNNKNHQQYMEVCKVNFPPKAIIIETLNSESLNNLNIEEFLP 380

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>RK2_ORYSA (P17351) Chloroplast 50S ribosomal protein L2|
          Length = 273

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 179 KQTPFSNFTNLTQEIDKARATTELLQASHRGAGHK 283
           K  P +N  +      K R +  ++ A HRG GHK
Sbjct: 23  KSNPRNNLIHGRHRCGKGRNSRGIITARHRGGGHK 57

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>RK2_ORYNI (Q6EN83) Chloroplast 50S ribosomal protein L2|
          Length = 273

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 179 KQTPFSNFTNLTQEIDKARATTELLQASHRGAGHK 283
           K  P +N  +      K R +  ++ A HRG GHK
Sbjct: 23  KSNPRNNLIHGRHRCGKGRNSRGIITARHRGGGHK 57

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>RK2_HORVU (P41096) Chloroplast 50S ribosomal protein L2|
          Length = 273

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 179 KQTPFSNFTNLTQEIDKARATTELLQASHRGAGHK 283
           K  P +N  +      K R +  ++ A HRG GHK
Sbjct: 23  KSNPRNNLIHGRHRCGKGRNSRGIITARHRGGGHK 57

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>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin)
          Length = 845

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
 Frame = +3

Query: 78  GGSPPHKKNIPEARPKNEQQ-NFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQPP 245
           GG+ PH  +    RP          G ++S +H  +     T+QT PK  T    PP
Sbjct: 498 GGTGPHPPSGTTLRPPTSSTPGGSPGAENSTSHQPATPGGDTAQT-PKPGTSQPMPP 553

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>TLE1_HUMAN (Q04724) Transducin-like enhancer protein 1 (ESG1) (E(Sp1) homolog)|
          Length = 770

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
 Frame = +1

Query: 67  QQGTEGPHLIRRTSPRHDQKMSSKTSVKEVKTRQLMMKANA---VLQLHKPHPRDRQSTS 237
           + G +   L+++ +       +S  S   +K++++ +   A   VL+   P PR    T 
Sbjct: 270 ENGIDKNRLLKKDASSSPASTASSASSTSLKSKEMSLHEKASTPVLKSSTPTPRSDMPTP 329

Query: 238 NHRATAGFTPRSG 276
              AT G  P  G
Sbjct: 330 GTSATPGLRPGLG 342

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>SMP1L_BOVIN (Q5EA00) Stromal membrane-associated protein 1-like|
          Length = 429

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +1

Query: 1   RWRRQGRPPPLRAHQLVQVRKAQ--QGTEGPHLIRRTSPR 114
           +W+R   P P +  + V   K +  Q  E P L R+TSP+
Sbjct: 140 KWKRGSEPAPEKKMEPVVFEKVKMPQKKEDPQLPRKTSPK 179

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>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2|
          Length = 322

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +1

Query: 10  RQGRPPPLRAHQLVQVRKAQQG--TEGPHLIRRTSPRHDQKMSSKTSVKEVKTR 165
           R  +  P    +L + R A  G   +    +++  P+H+ K SS+   +E KTR
Sbjct: 212 RAQKSEPREGQKLPKSRTAYSGGAEDLERELKKEKPKHEHKSSSRREAREEKTR 265

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>UDB3_RAT (P08542) UDP-glucuronosyltransferase 2B3 precursor (EC 2.4.1.17)|
           (UDPGT) (Testosterone, dihydrotestosterone, and
           beta-estradiol specific) (17-beta-hydroxysteroid
           specific) (UDPGTr-3) (RLUG38)
          Length = 530

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 315 CLQSGNCNQLALWP 274
           C QSGNC ++ +WP
Sbjct: 17  CFQSGNCGKVLVWP 30

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>CAC1S_RAT (Q02485) Voltage-dependent L-type calcium channel alpha-1S subunit|
            (Voltage-gated calcium channel alpha subunit Cav1.1)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 3,
            skeletal muscle) (ROB1) (Fragment)
          Length = 1146

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +3

Query: 153  GQDSATHDESKRRSPTSQTSPKRSTKHEQPPSYCRLHTEERAIRRAG 293
            G +S +H +   R    Q S +R  K + PPS C+L  E+  +   G
Sbjct: 999  GVNSRSHVDKLER----QMSQRRMPKGQVPPSPCQLSQEKHPVHEEG 1041

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>IF2_OCEIH (Q8EQU1) Translation initiation factor IF-2|
          Length = 692

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +3

Query: 96  KKNIPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQTSPKRSTKHEQP 242
           KK   + +  N+QQN +K  Q +    +SK      Q  PK++ + E+P
Sbjct: 58  KKGQNQKQSNNQQQNRQKQNQKN----QSKPNKNKKQKGPKKNQQQERP 102

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>TAT_HV1JR (P20879) TAT protein (Transactivating regulatory protein)|
          Length = 101

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = +3

Query: 105 IPEARPKNEQQNFRKGGQDSATHDESKRRSPTSQ-----TSPKRSTK 230
           I   R K  Q+  R+  QDS TH  S  + P+SQ     T PK S K
Sbjct: 45  ISYGRKKRRQR--RRPPQDSQTHQVSLPKQPSSQQRGDPTGPKESKK 89


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,722,524
Number of Sequences: 219361
Number of extensions: 1096014
Number of successful extensions: 4168
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 3967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4157
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result