>PIF1_YEAST (P07271) DNA repair and recombination protein PIF1, mitochondrial|
           precursor (EC 3.6.1.-) (ATP-dependent helicase PIF1)
          Length = 857

 Score = 31.6 bits (70), Expect = 0.80
 Identities = 18/50 (36%), Positives = 30/50 (60%)
 Frame = +2

Query: 167 TQTFHGCANKLPEAHPRRRYLLRTQGDTVQRHSLGPDEPPARSVLINIVE 316
           TQ+ +G A  L + H R+R+ L+ + ++ Q HSL  DEP  +    +I+E
Sbjct: 809 TQSNNGIAAML-QRHSRKRFQLKKESNSNQVHSLVSDEPRGQDTEDHILE 857

>DSG1B_MOUSE (Q7TSF1) Desmoglein-1 beta precursor (Dsg1-beta) (Desmoglein-5)|
          Length = 1060

 Score = 26.9 bits (58), Expect(2) = 1.4
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 225 TCSGHKVIPSNGTAWVPMNRPHGPCSSTSSRASED 329
           TC+G  VI  +GT WVP +   G  SS+ S  + D
Sbjct: 474 TCTGTIVIELSGTGWVPGS--DGGGSSSGSGGNRD 506



 Score = 22.3 bits (46), Expect(2) = 1.4
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 316 GHQRIWASISMTCLCGTSSAPATSGRSSPL 405
           G QR+  S  +T   G S    T GR +PL
Sbjct: 519 GPQRVTGSGGVTSSGGGSGVNNTPGRQNPL 548

>PURL_PYRAE (Q8ZZJ7) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 697

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 251 VQRHSLGPDEPPARSVLINIVEGIRGYGHR 340
           V  H   P  P AR + +N++ GI  YG+R
Sbjct: 115 VNLHFGPPSHPHARWIAVNVIRGISDYGNR 144

>SYFB_SYMTH (Q67QF2) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 892

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -2

Query: 399 RAASGCSWCGAGPT*ACHRYRCPYPLMPSTMLMSTDRAGGSSGPRLCRWTVSPCVRS 229
           RAA   +    G   A H   CP P +P  +L+ T+RA   +G +L    ++  +RS
Sbjct: 381 RAAQLMAELAGGTVVAGHVDVCPRPAVPPVILLRTERANALTGLKLTPERMAEHLRS 437

>CS021_HUMAN (Q8IVT2) Protein C19orf21|
          Length = 679

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 11/76 (14%)
 Frame = +2

Query: 197 LPEAHPRRRYLLRTQGDTVQRHSL----------GPDEPPARSVLINIVEGIRGYGHRYR 346
           +P+AH     +L   GDT   + L          G DEP          +G++  G  Y 
Sbjct: 12  IPQAHRGTGLVL--DGDTSYTYHLVCMGPEASGWGQDEPQTWPTDHRAQQGVQRQGVSYS 69

Query: 347 *HAYVG-PAPHQLHPD 391
            HAY G P+P  LH +
Sbjct: 70  VHAYTGQPSPRGLHSE 85

>CTTB2_HUMAN (Q8WZ74) Cortactin-binding protein 2 (CortBP2)|
          Length = 1663

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +3

Query: 189 PTSSLKHIPEDA---TCSGHKVIPSNGTAWVPMNRPHGPCSSTS 311
           PTSS   +P +A   T     + P N  A  PM+  H PC++TS
Sbjct: 394 PTSSTPPLPSNAAPPTAQTPGIAPQNSQA-PPMHSLHSPCANTS 436

>LYS1_SCHPO (Q09694) Saccharopine dehydrogenase [NAD+, L-lysine-forming] (EC|
           1.5.1.7) (Lysine--2-oxoglutarate reductase) (SDH)
          Length = 368

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 177 FMVVPTSSLKHIPEDATCSGHKVIPSNGTAWVPMNRPH 290
           F +VP  S +H P+DA   G K +P N  +  P+   H
Sbjct: 56  FPMVPEGSWRHAPKDAYIIGLKELPENDNS--PLKHTH 91

>IDI2_VIBPA (Q87JH5) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP|
           isomerase) (Isopentenyl pyrophosphate isomerase)
          Length = 339

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
 Frame = -3

Query: 239 VSGAGSVFWDVLQGACWHN------HETF-EFMVISSTCICTQEAGTRQDDQKQQRVQSG 81
           V+GAG   W  ++G C  N       E F ++ + ++TC+    A  R    K   + SG
Sbjct: 216 VAGAGGTSWSAVEGYCQDNPHMQRAAELFRDWGIPTATCL----AQIRAQHPKLPLIASG 271

Query: 80  ALH-GHELINCVHV 42
            +H G E    +H+
Sbjct: 272 GIHNGLEAAKAIHL 285

>LAC3_TRAVI (Q99049) Laccase 3 precursor (EC 1.10.3.2) (Benzenediol:oxygen|
           oxidoreductase) (Urishiol oxidase) (Diphenol oxidase)
          Length = 473

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
 Frame = +2

Query: 173 TFHGCA---NKLPEAHPRRRYLLRTQGDTVQRHSLGP-----DEPPARSVLINIVEGIRG 328
           TF+G     N  P   P    LL+    T+  + L P     + PP  ++ ++I  G+ G
Sbjct: 348 TFNGSEFFINDAPFVPPTVPVLLQILNGTLDANDLLPPGSVYNLPPDSTIELSIPGGVTG 407

Query: 329 YGHRYR*HAYVGPAPHQLHPDAALH 403
             H +  H    P P  LH     H
Sbjct: 408 GPHPFHLHGTDNPGPWFLHCHIDFH 432

>EXO70_SCHPO (Q10339) Exocyst complex component exo70|
          Length = 615

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +2

Query: 191 NKLPEAHPRRRYLLRTQGDTVQRHSLGPDEPPARSV 298
           N+L E H    YLL + G+   RH +  D  PARSV
Sbjct: 389 NELAE-HENASYLLESIGNWGWRHEINADLSPARSV 423


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,599,433
Number of Sequences: 219361
Number of extensions: 1320338
Number of successful extensions: 3602
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3602
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)