ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart53h06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_474420.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 663 Score = 89.7 bits (45), Expect = 6e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 313 ttctacctgcaggacctggcggtgctctgcctcaacgtcaccccgcccacctccgcctac 372 |||||||||||||||||| | ||||| ||||||||||| || ||||| | ||||||||| Sbjct: 157 ttctacctgcaggacctgtccgtgctgtgcctcaacgtgacgccgccggcgtccgcctac 216 Query: 373 ctcttcaccaccatgca 389 ||||||||||||||||| Sbjct: 217 ctcttcaccaccatgca 233
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 89.7 bits (45), Expect = 6e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 313 ttctacctgcaggacctggcggtgctctgcctcaacgtcaccccgcccacctccgcctac 372 |||||||||||||||||| | ||||| ||||||||||| || ||||| | ||||||||| Sbjct: 35046994 ttctacctgcaggacctgtccgtgctgtgcctcaacgtgacgccgccggcgtccgcctac 35046935 Query: 373 ctcttcaccaccatgca 389 ||||||||||||||||| Sbjct: 35046934 ctcttcaccaccatgca 35046918 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ccctcgtcctcctcgccctc 264 |||||||||||||||||||| Sbjct: 23106905 ccctcgtcctcctcgccctc 23106924
>dbj|AK103610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133J15, full insert sequence Length = 1420 Score = 89.7 bits (45), Expect = 6e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 313 ttctacctgcaggacctggcggtgctctgcctcaacgtcaccccgcccacctccgcctac 372 |||||||||||||||||| | ||||| ||||||||||| || ||||| | ||||||||| Sbjct: 570 ttctacctgcaggacctgtccgtgctgtgcctcaacgtgacgccgccggcgtccgcctac 629 Query: 373 ctcttcaccaccatgca 389 ||||||||||||||||| Sbjct: 630 ctcttcaccaccatgca 646
>dbj|AK069353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014D16, full insert sequence Length = 1024 Score = 89.7 bits (45), Expect = 6e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 313 ttctacctgcaggacctggcggtgctctgcctcaacgtcaccccgcccacctccgcctac 372 |||||||||||||||||| | ||||| ||||||||||| || ||||| | ||||||||| Sbjct: 193 ttctacctgcaggacctgtccgtgctgtgcctcaacgtgacgccgccggcgtccgcctac 252 Query: 373 ctcttcaccaccatgca 389 ||||||||||||||||| Sbjct: 253 ctcttcaccaccatgca 269
>dbj|AK061257.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B04, full insert sequence Length = 1027 Score = 89.7 bits (45), Expect = 6e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 313 ttctacctgcaggacctggcggtgctctgcctcaacgtcaccccgcccacctccgcctac 372 |||||||||||||||||| | ||||| ||||||||||| || ||||| | ||||||||| Sbjct: 196 ttctacctgcaggacctgtccgtgctgtgcctcaacgtgacgccgccggcgtccgcctac 255 Query: 373 ctcttcaccaccatgca 389 ||||||||||||||||| Sbjct: 256 ctcttcaccaccatgca 272
>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete sequence Length = 112897 Score = 89.7 bits (45), Expect = 6e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 313 ttctacctgcaggacctggcggtgctctgcctcaacgtcaccccgcccacctccgcctac 372 |||||||||||||||||| | ||||| ||||||||||| || ||||| | ||||||||| Sbjct: 1662 ttctacctgcaggacctgtccgtgctgtgcctcaacgtgacgccgccggcgtccgcctac 1603 Query: 373 ctcttcaccaccatgca 389 ||||||||||||||||| Sbjct: 1602 ctcttcaccaccatgca 1586
>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete sequence Length = 94152 Score = 89.7 bits (45), Expect = 6e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 313 ttctacctgcaggacctggcggtgctctgcctcaacgtcaccccgcccacctccgcctac 372 |||||||||||||||||| | ||||| ||||||||||| || ||||| | ||||||||| Sbjct: 78662 ttctacctgcaggacctgtccgtgctgtgcctcaacgtgacgccgccggcgtccgcctac 78603 Query: 373 ctcttcaccaccatgca 389 ||||||||||||||||| Sbjct: 78602 ctcttcaccaccatgca 78586
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 89.7 bits (45), Expect = 6e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 313 ttctacctgcaggacctggcggtgctctgcctcaacgtcaccccgcccacctccgcctac 372 |||||||||||||||||| | ||||| ||||||||||| || ||||| | ||||||||| Sbjct: 106041 ttctacctgcaggacctgtccgtgctgtgcctcaacgtgacgccgccggcgtccgcctac 105982 Query: 373 ctcttcaccaccatgca 389 ||||||||||||||||| Sbjct: 105981 ctcttcaccaccatgca 105965
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 278 tcgtctacctggtgctccgcccccacaagcccaccttctacctgcaggacct 329 |||||||||| | |||||||||| |||||| ||||||||||||||||||| Sbjct: 19974795 tcgtctacctcgcgctccgcccctccaagccgtccttctacctgcaggacct 19974744
>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05 Length = 166165 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 278 tcgtctacctggtgctccgcccccacaagcccaccttctacctgcaggacct 329 |||||||||| | |||||||||| |||||| ||||||||||||||||||| Sbjct: 152396 tcgtctacctcgcgctccgcccctccaagccgtccttctacctgcaggacct 152345
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 278 tcgtctacctggtgctccgcccccacaagcccaccttctacctgcaggacct 329 |||||||||| | |||||||||| |||||| ||||||||||||||||||| Sbjct: 78916 tcgtctacctcgcgctccgcccctccaagccgtccttctacctgcaggacct 78865
>dbj|AK109402.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G02, full insert sequence Length = 1071 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 278 tcgtctacctggtgctccgcccccacaagcccaccttctacctgcaggacct 329 |||||||||| | |||||||||| |||||| ||||||||||||||||||| Sbjct: 250 tcgtctacctcgcgctccgcccctccaagccgtccttctacctgcaggacct 301
>dbj|AK109400.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D03, full insert sequence Length = 1051 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 278 tcgtctacctggtgctccgcccccacaagcccaccttctacctgcaggacct 329 |||||||||| | |||||||||| |||||| ||||||||||||||||||| Sbjct: 229 tcgtctacctcgcgctccgcccctccaagccgtccttctacctgcaggacct 280
>dbj|AK104564.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D10, full insert sequence Length = 906 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 278 tcgtctacctggtgctccgcccccacaagcccaccttctacctgcaggacct 329 |||||||||| | |||||||||| |||||| ||||||||||||||||||| Sbjct: 197 tcgtctacctcgcgctccgcccctccaagccgtccttctacctgcaggacct 248
>dbj|AK104600.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G02, full insert sequence Length = 988 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 278 tcgtctacctggtgctccgcccccacaagcccaccttctacctgcaggacct 329 |||||||||| | |||||||||| |||||| ||||||||||||||||||| Sbjct: 229 tcgtctacctcgcgctccgcccctccaagccgtccttctacctgcaggacct 280
>dbj|AK065946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049G21, full insert sequence Length = 1007 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 278 tcgtctacctggtgctccgcccccacaagcccaccttctacctgcaggacct 329 |||||||||| | |||||||||| |||||| ||||||||||||||||||| Sbjct: 198 tcgtctacctcgcgctccgcccctccaagccgtccttctacctgcaggacct 249
>dbj|AK061396.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-E05, full insert sequence Length = 1051 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 278 tcgtctacctggtgctccgcccccacaagcccaccttctacctgcaggacct 329 |||||||||| | |||||||||| |||||| ||||||||||||||||||| Sbjct: 229 tcgtctacctcgcgctccgcccctccaagccgtccttctacctgcaggacct 280
>dbj|AK060001.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G10, full insert sequence Length = 940 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 278 tcgtctacctggtgctccgcccccacaagcccaccttctacctgcaggacct 329 |||||||||| | |||||||||| |||||| ||||||||||||||||||| Sbjct: 226 tcgtctacctcgcgctccgcccctccaagccgtccttctacctgcaggacct 277
>ref|XM_957527.1| Neurospora crassa OR74A hypothetical protein (NCU06980.1) partial mRNA Length = 3699 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 241 ctcgccctcgtcctcctcgccctct 265 ||||||||||||||||||||||||| Sbjct: 3594 ctcgccctcgtcctcctcgccctct 3570
>ref|XM_327265.1| Neurospora crassa OR74A hypothetical protein (NCU06980.1) partial mRNA Length = 3699 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 241 ctcgccctcgtcctcctcgccctct 265 ||||||||||||||||||||||||| Sbjct: 3594 ctcgccctcgtcctcctcgccctct 3570
>ref|XM_679958.1| PREDICTED: Danio rerio similar to C2-HC type zinc finger protein X-MyT1 (LOC557002), mRNA Length = 3480 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 |||||||| ||||||||||| ||||||||||| Sbjct: 920 tcctcctccccctcttcatcttcctcatcgtc 889
>ref|XM_678787.1| PREDICTED: Danio rerio similar to C2-HC type zinc finger protein X-MyT1 (LOC556076), mRNA Length = 3315 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 |||||||| ||||||||||| ||||||||||| Sbjct: 755 tcctcctccccctcttcatcttcctcatcgtc 724
>ref|XM_688598.1| PREDICTED: Danio rerio similar to Myelin transcription factor 1 (MYT1) (MYTI) (Proteolipid protein binding protein) (PLPB1) (LOC565321), mRNA Length = 2421 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 |||||||| ||||||||||| ||||||||||| Sbjct: 755 tcctcctccccctcttcatcttcctcatcgtc 724
>emb|AL845357.6| Zebrafish DNA sequence from clone DKEY-202M22 in linkage group 20, complete sequence Length = 221012 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 |||||||| ||||||||||| ||||||||||| Sbjct: 67719 tcctcctccccctcttcatcttcctcatcgtc 67750
>gb|AY108115.1| Zea mays PCO094434 mRNA sequence Length = 1184 Score = 48.1 bits (24), Expect = 0.022 Identities = 54/64 (84%) Strand = Plus / Plus Query: 264 cttcatcatcctcatcgtctacctggtgctccgcccccacaagcccaccttctacctgca 323 ||||||| | ||| || ||||||||| ||| |||||| |||||| ||||||||||||| Sbjct: 304 cttcatcgtgctcgtcatctacctggcgctgcgcccctccaagccgtccttctacctgca 363 Query: 324 ggac 327 |||| Sbjct: 364 ggac 367
>emb|AL845367.6| Zebrafish DNA sequence from clone DKEYP-33D4 in linkage group 20, complete sequence Length = 104646 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 |||||||| ||||||||||| ||||||||||| Sbjct: 41712 tcctcctccccctcttcatcttcctcatcgtc 41681
>gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0076K20, complete sequence Length = 127338 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Plus Query: 274 ctcatcgtctacctggtgctccgcccc 300 |||||||||||||| |||||||||||| Sbjct: 4803 ctcatcgtctacctcgtgctccgcccc 4829
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence Length = 159632 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Minus Query: 274 ctcatcgtctacctggtgctccgcccc 300 |||||||||||||| |||||||||||| Sbjct: 1802 ctcatcgtctacctcgtgctccgcccc 1776
>gb|AC135253.2| Homo sapiens 3 BAC RP11-324L7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154492 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 gctgctcgccctcgtcctcctcg 259 ||||||||||||||||||||||| Sbjct: 152311 gctgctcgccctcgtcctcctcg 152289
>gb|AF095711.1|AF095711 Myomyrus pharao cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 486 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 tcgccctcttcatcatcctcatc 279 ||||||||||||||||||||||| Sbjct: 422 tcgccctcttcatcatcctcatc 444
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Minus Query: 274 ctcatcgtctacctggtgctccgcccc 300 |||||||||||||| |||||||||||| Sbjct: 2721995 ctcatcgtctacctcgtgctccgcccc 2721969
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Plus Query: 241 ctcgccctcgtcctcctcgccctcttc 267 ||||||||| ||||||||||||||||| Sbjct: 2865017 ctcgccctcttcctcctcgccctcttc 2865043 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 cggcgcgctgctcgccctcgt 251 ||||||||||||||||||||| Sbjct: 2144915 cggcgcgctgctcgccctcgt 2144935 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 gctgctcgccctcgtcctcc 256 |||||||||||||||||||| Sbjct: 8877467 gctgctcgccctcgtcctcc 8877486
>gb|AF201602.1| Myomyrus macrops cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 1142 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 tcgccctcttcatcatcctcatc 279 ||||||||||||||||||||||| Sbjct: 1078 tcgccctcttcatcatcctcatc 1100
>dbj|AK119781.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F02, full insert sequence Length = 990 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Plus Query: 274 ctcatcgtctacctggtgctccgcccc 300 |||||||||||||| |||||||||||| Sbjct: 275 ctcatcgtctacctcgtgctccgcccc 301
>dbj|AK106091.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B08, full insert sequence Length = 1020 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Plus Query: 274 ctcatcgtctacctggtgctccgcccc 300 |||||||||||||| |||||||||||| Sbjct: 279 ctcatcgtctacctcgtgctccgcccc 305
>dbj|AK104479.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-F10, full insert sequence Length = 994 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Plus Query: 274 ctcatcgtctacctggtgctccgcccc 300 |||||||||||||| |||||||||||| Sbjct: 279 ctcatcgtctacctcgtgctccgcccc 305
>dbj|AK104466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C09, full insert sequence Length = 1020 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Plus Query: 274 ctcatcgtctacctggtgctccgcccc 300 |||||||||||||| |||||||||||| Sbjct: 279 ctcatcgtctacctcgtgctccgcccc 305
>dbj|AK104372.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E09, full insert sequence Length = 994 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Plus Query: 274 ctcatcgtctacctggtgctccgcccc 300 |||||||||||||| |||||||||||| Sbjct: 279 ctcatcgtctacctcgtgctccgcccc 305
>dbj|AK104217.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C11, full insert sequence Length = 1020 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Plus Query: 274 ctcatcgtctacctggtgctccgcccc 300 |||||||||||||| |||||||||||| Sbjct: 279 ctcatcgtctacctcgtgctccgcccc 305
>dbj|AK070326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052I16, full insert sequence Length = 1026 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Plus Query: 274 ctcatcgtctacctggtgctccgcccc 300 |||||||||||||| |||||||||||| Sbjct: 280 ctcatcgtctacctcgtgctccgcccc 306
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Minus Query: 274 ctcatcgtctacctggtgctccgcccc 300 |||||||||||||| |||||||||||| Sbjct: 2731026 ctcatcgtctacctcgtgctccgcccc 2731000
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Plus Query: 244 gccctcgtcctcctcgccctcttcatc 270 ||||| ||||||||||||||||||||| Sbjct: 955215 gccctggtcctcctcgccctcttcatc 955241 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 ctcgccctcgtcctcctcgccctct 265 ||||||||| ||||||||||||||| Sbjct: 166979 ctcgccctcttcctcctcgccctct 167003 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 cccacctccgcctacctcttcacc 381 ||||||| |||||||||||||||| Sbjct: 1694615 cccacctacgcctacctcttcacc 1694592
>ref|NM_199986.1| Danio rerio acidic (leucine-rich) nuclear phosphoprotein 32 family, member A (anp32a), mRNA Length = 1729 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtcta 284 |||||||||||||||||||||| Sbjct: 608 tcttcatcatcctcatcgtcta 587
>gb|AC116697.7| Mus musculus chromosome 3, clone RP24-444C12, complete sequence Length = 183146 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Minus Query: 246 cctcgtcctcctcgccctcttcatcatcctcatc 279 |||| ||||||| | ||||||||||||||||||| Sbjct: 112892 cctcctcctccttgtcctcttcatcatcctcatc 112859
>gb|AY392161.1| Scyliorhinus canicula calreticulin mRNA, partial cds Length = 890 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 261 cctcttcatcatcctcatcgtc 282 |||||||||||||||||||||| Sbjct: 851 cctcttcatcatcctcatcgtc 830
>ref|XM_657315.1| Aspergillus nidulans FGSC A4 40S ribosomal protein S9 (AN4803.2), mRNA Length = 582 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 246 cctcgtcctcctcgccctcttcatca 271 ||||||||||||||||||| |||||| Sbjct: 577 cctcgtcctcctcgccctcgtcatca 552
>gb|AC126408.6| Mus musculus chromosome 13, clone RP23-216P14, complete sequence Length = 238967 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 254 tcctcgccctcttcatcatcctcatc 279 |||||| ||||||||||||||||||| Sbjct: 56934 tcctcgtcctcttcatcatcctcatc 56909
>gb|BC025483.1| Mus musculus cDNA sequence BC021381, mRNA (cDNA clone MGC:38018 IMAGE:5150988), complete cds Length = 3215 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 254 tcctcgccctcttcatcatcctcatc 279 |||||| ||||||||||||||||||| Sbjct: 637 tcctcgtcctcttcatcatcctcatc 662
>gb|AC130969.4| Rattus norvegicus 2 BAC CH230-105B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 238254 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Minus Query: 246 cctcgtcctcctcgccctcttcatcatcctcatc 279 ||||||||||||| |||||||||| |||||||| Sbjct: 233023 cctcgtcctcctcatcctcttcatcctcctcatc 232990
>ref|XM_745913.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g11220) partial mRNA Length = 3225 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 333 ggtgctctgcctcaacgtcacc 354 |||||||||||||||||||||| Sbjct: 2820 ggtgctctgcctcaacgtcacc 2841
>emb|Z28088.1|SCYKL088W S.cerevisiae chromosome XI reading frame ORF YKL088w Length = 2145 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Minus Query: 246 cctcgtcctcctcgccctcttcatcatcctcatc 279 ||||||||||||| ||||||| ||||||||||| Sbjct: 1863 cctcgtcctcctcatcctcttcgtcatcctcatc 1830
>emb|AL807577.1|AFA12H2 Aspergillus fumigatus BAC AFA12F2 Length = 79718 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 333 ggtgctctgcctcaacgtcacc 354 |||||||||||||||||||||| Sbjct: 66045 ggtgctctgcctcaacgtcacc 66066
>emb|BX914196.10| Zebrafish DNA sequence from clone DKEYP-71E8 in linkage group 7, complete sequence Length = 166715 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtcta 284 |||||||||||||||||||||| Sbjct: 162512 tcttcatcatcctcatcgtcta 162491
>dbj|AK155237.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630210H04 product:hypothetical Proline-rich region profile/Serine-rich region profile containing protein, full insert sequence Length = 4332 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 254 tcctcgccctcttcatcatcctcatc 279 |||||| ||||||||||||||||||| Sbjct: 1772 tcctcgtcctcttcatcatcctcatc 1797
>dbj|AK087612.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN full-length enriched library, clone:E230024J12 product:unclassifiable, full insert sequence Length = 3006 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Plus Query: 246 cctcgtcctcctcgccctcttcatcatcctcatc 279 |||| ||||||| | ||||||||||||||||||| Sbjct: 1447 cctcctcctccttgtcctcttcatcatcctcatc 1480
>gb|BC071357.1| Danio rerio acidic (leucine-rich) nuclear phosphoprotein 32 family, member A, mRNA (cDNA clone MGC:86673 IMAGE:6894834), complete cds Length = 1795 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtcta 284 |||||||||||||||||||||| Sbjct: 663 tcttcatcatcctcatcgtcta 642
>gb|BC048047.1| Danio rerio acidic (leucine-rich) nuclear phosphoprotein 32 family, member A, mRNA (cDNA clone MGC:55516 IMAGE:2641900), complete cds Length = 1729 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtcta 284 |||||||||||||||||||||| Sbjct: 608 tcttcatcatcctcatcgtcta 587
>ref|XM_573985.1| PREDICTED: Rattus norvegicus similar to mKIAA1931 protein (LOC498703), mRNA Length = 3155 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 254 tcctcgccctcttcatcatcctcatc 279 |||||| ||||||||||||||||||| Sbjct: 625 tcctcgtcctcttcatcatcctcatc 650
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 aacgtcaccccgcccacctccg 367 |||||||||||||||||||||| Sbjct: 688386 aacgtcaccccgcccacctccg 688365
>dbj|AK173303.1| Mus musculus mRNA for mKIAA1931 protein Length = 3189 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 254 tcctcgccctcttcatcatcctcatc 279 |||||| ||||||||||||||||||| Sbjct: 627 tcctcgtcctcttcatcatcctcatc 652
>ref|NM_208439.1| Eremothecium gossypii ABR139Wp (ABR139W), mRNA Length = 3813 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Minus Query: 248 tcgtcctcctcgccctcttcatcatcctcatcgtctac 285 |||||||||||| |||| ||||||||||| || ||||| Sbjct: 479 tcgtcctcctcgtcctcgtcatcatcctcgtcctctac 442
>emb|X67017.1|SCCYT2CL S.cerevisiae cyt2 gene for cytochrome c heme lyase Length = 1416 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Plus Query: 246 cctcgtcctcctcgccctcttcatcatcctcatc 279 ||||||||||||| ||||||| ||||||||||| Sbjct: 1203 cctcgtcctcctcatcctcttcgtcatcctcatc 1236
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Minus Query: 248 tcgtcctcctcgccctcttcatcatcctcatcgtctac 285 |||||||||||| |||| ||||||||||| || ||||| Sbjct: 658622 tcgtcctcctcgtcctcgtcatcatcctcgtcctctac 658585
>ref|XM_509611.1| PREDICTED: Pan troglodytes similar to high mobility group box 1; high mobility group protein 1 (LOC452518), mRNA Length = 830 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 246 cctcgtcctcctcgccctcttcatcatcctcatcgtc 282 |||| |||||||| |||||||||| ||||||||||| Sbjct: 702 cctcctcctcctcatcctcttcatcttcctcatcgtc 666
>ref|NM_001031192.1| Gallus gallus diacylglycerol kinase, zeta 104kDa (DGKZ), mRNA Length = 4728 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 240 gctcgccctcgtcctcctcgccctc 264 |||||||||||||||||||| |||| Sbjct: 117 gctcgccctcgtcctcctcgtcctc 141
>gb|AC123998.7| Mus musculus chromosome 5, clone RP24-421H18, complete sequence Length = 151344 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 252 cctcctcgccctcttcatcatcctc 276 ||||||| ||||||||||||||||| Sbjct: 72139 cctcctctccctcttcatcatcctc 72115
>ref|XM_612559.2| PREDICTED: Bos taurus acidic (leucine-rich) nuclear phosphoprotein 32 family, member D (ANP32D), mRNA Length = 1872 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 261 cctcttcatcatcctcatcgtctac 285 |||||||||| |||||||||||||| Sbjct: 640 cctcttcatcttcctcatcgtctac 616
>ref|XM_654602.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2090.2), mRNA Length = 2034 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatc 279 |||||||| |||||||||||||| ||||| Sbjct: 1598 tcctcctctccctcttcatcatcttcatc 1570
>ref|XM_386341.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG06165.1) partial mRNA Length = 1977 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 255 cctcgccctcttcatcatcctcatc 279 ||||| ||||||||||||||||||| Sbjct: 1465 cctcggcctcttcatcatcctcatc 1441
>emb|CR730186.2|CNS0GQCW Tetraodon nigroviridis full-length cDNA Length = 1582 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 241 ctcgccctcgtcctcctcgccctcttcatcatcctcatcgt 281 |||| |||| |||||||| ||||||||||| || ||||||| Sbjct: 693 ctcgtcctcctcctcctctccctcttcatcctcgtcatcgt 653
>emb|CR729304.2|CNS0GPOE Tetraodon nigroviridis full-length cDNA Length = 1530 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 241 ctcgccctcgtcctcctcgccctcttcatcatcctcatcgt 281 |||| |||| |||||||| ||||||||||| || ||||||| Sbjct: 642 ctcgtcctcctcctcctctccctcttcatcctcgtcatcgt 602
>emb|CR728215.2|CNS0GOU5 Tetraodon nigroviridis full-length cDNA Length = 1582 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 241 ctcgccctcgtcctcctcgccctcttcatcatcctcatcgt 281 |||| |||| |||||||| ||||||||||| || ||||||| Sbjct: 695 ctcgtcctcctcctcctctccctcttcatcctcgtcatcgt 655
>gb|AC163330.4| Mus musculus chromosome 5, clone RP23-167H23, complete sequence Length = 207781 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 252 cctcctcgccctcttcatcatcctc 276 ||||||| ||||||||||||||||| Sbjct: 32652 cctcctctccctcttcatcatcctc 32676
>gb|AC171181.3| Pan troglodytes BAC clone CH251-214F24 from chromosome unknown, complete sequence Length = 165414 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 246 cctcgtcctcctcgccctcttcatcatcctcatcgtc 282 |||| |||||||| |||||||||| ||||||||||| Sbjct: 41655 cctcctcctcctcatcctcttcatcttcctcatcgtc 41691
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 306 gcccaccttctacctgcaggacctg 330 |||||||| |||||||||||||||| Sbjct: 212906 gcccacctgctacctgcaggacctg 212930
>emb|AL138696.16| Human DNA sequence from clone RP11-369L4 on chromosome 13, complete sequence Length = 130931 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 accaccatccatatccataat 154 ||||||||||||||||||||| Sbjct: 78712 accaccatccatatccataat 78732
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 243 cgccctcgtcctcctcgccctcttc 267 ||||||| ||||||||||||||||| Sbjct: 77756 cgccctcttcctcctcgccctcttc 77732
>emb|AJ851406.1| Gallus gallus mRNA for hypothetical protein, clone 1p14 Length = 4728 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 240 gctcgccctcgtcctcctcgccctc 264 |||||||||||||||||||| |||| Sbjct: 117 gctcgccctcgtcctcctcgtcctc 141
>gb|AF440620.1|AF440620 Homo sapiens 13q14 chronic lymphocytic leukemia suppressor locus section 2 of 2 Length = 440917 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 accaccatccatatccataat 154 ||||||||||||||||||||| Sbjct: 26642 accaccatccatatccataat 26662
>ref|XM_702777.1| PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.2, transcript variant 4 (pknox1.2), mRNA Length = 1403 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 254 tcctcgccctcttcatcatcctcatcgtc 282 |||||| ||||||||||||| |||||||| Sbjct: 1342 tcctcgtcctcttcatcatcttcatcgtc 1314
>ref|XM_702776.1| PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.2, transcript variant 3 (pknox1.2), mRNA Length = 1413 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 254 tcctcgccctcttcatcatcctcatcgtc 282 |||||| ||||||||||||| |||||||| Sbjct: 1324 tcctcgtcctcttcatcatcttcatcgtc 1296
>ref|XM_680266.1| PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.2, transcript variant 1 (pknox1.2), mRNA Length = 1226 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 254 tcctcgccctcttcatcatcctcatcgtc 282 |||||| ||||||||||||| |||||||| Sbjct: 1165 tcctcgtcctcttcatcatcttcatcgtc 1137
>ref|XM_702775.1| PREDICTED: Danio rerio pbx/knotted 1 homeobox 1.2, transcript variant 2 (pknox1.2), mRNA Length = 1428 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 254 tcctcgccctcttcatcatcctcatcgtc 282 |||||| ||||||||||||| |||||||| Sbjct: 1339 tcctcgtcctcttcatcatcttcatcgtc 1311
>emb|BX470235.7| Zebrafish DNA sequence from clone DKEY-22N8 in linkage group 1, complete sequence Length = 111247 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 254 tcctcgccctcttcatcatcctcatcgtc 282 |||||| ||||||||||||| |||||||| Sbjct: 67153 tcctcgtcctcttcatcatcttcatcgtc 67181
>gb|AF279660.2|AF279660 Homo sapiens CAR (RFP2) gene, complete cds; DLEU2 and DLEU1 genes, complete sequence; and RPL18 and p48/Hip pseudogenes, complete sequence Length = 347503 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 accaccatccatatccataat 154 ||||||||||||||||||||| Sbjct: 328710 accaccatccatatccataat 328730
>gb|AC005948.14| Homo sapiens chromosome 13 clone 460f10 map 13q14, complete sequence Length = 154065 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 accaccatccatatccataat 154 ||||||||||||||||||||| Sbjct: 142641 accaccatccatatccataat 142621
>gb|AC013358.32| Homo sapiens chromosome 13 clone 2252c9 map 13q14, complete sequence Length = 140312 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 accaccatccatatccataat 154 ||||||||||||||||||||| Sbjct: 120245 accaccatccatatccataat 120265
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 237 gctgctcgccctcgtcctcctcgcc 261 ||||||||||||| ||||||||||| Sbjct: 14595493 gctgctcgccctcctcctcctcgcc 14595469
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 ctcgccctcgtcctcctcgccctct 265 ||||||||| ||||||||||||||| Sbjct: 516491 ctcgccctcttcctcctcgccctct 516515 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 cccacctccgcctacctcttcacc 381 ||||||| |||||||||||||||| Sbjct: 195183 cccacctacgcctacctcttcacc 195206
>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1294_G06 Length = 115468 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 237 gctgctcgccctcgtcctcctcgcc 261 ||||||||||||| ||||||||||| Sbjct: 93782 gctgctcgccctcctcctcctcgcc 93758
>emb|BX279522.4| Zebrafish DNA sequence from clone BUSM1-47G21 in linkage group 1, complete sequence Length = 110527 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 254 tcctcgccctcttcatcatcctcatcgtc 282 |||||| ||||||||||||| |||||||| Sbjct: 67313 tcctcgtcctcttcatcatcttcatcgtc 67341
>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0643D11 Length = 137525 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 237 gctgctcgccctcgtcctcctcgcc 261 ||||||||||||| ||||||||||| Sbjct: 17160 gctgctcgccctcctcctcctcgcc 17136
>gb|AF226637.1|AF226637 Cercopithecine herpesvirus 1 ICP18.5 protein (UL28) gene, partial cds; and gB glycoprotein (UL27) gene, complete cds Length = 3043 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ctcgccctcgtcctcctcgcc 261 ||||||||||||||||||||| Sbjct: 238 ctcgccctcgtcctcctcgcc 258
>dbj|AK073672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033054E07, full insert sequence Length = 690 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 gctgctcgccctcgtcctcctcgcc 261 ||||||||||||| ||||||||||| Sbjct: 34 gctgctcgccctcctcctcctcgcc 58
>emb|AL450169.1|CNS07EEW Genomic sequence at the putative B_CLL involved tumor suppressor gene locus on human chromosome 13q14.3 clone PAC 4E7,BAC 93D9,PAC 63H3 of library LLNL from chromosome 13 of Homo sapiens (human) Length = 279647 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 accaccatccatatccataat 154 ||||||||||||||||||||| Sbjct: 213888 accaccatccatatccataat 213908
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 230 gcggcgcgctgctcgccctcgtcct 254 |||||||||||| |||||||||||| Sbjct: 4596765 gcggcgcgctgcgcgccctcgtcct 4596789 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 gcggcgggcacaagggcggctgcg 196 ||||| |||||||||||||||||| Sbjct: 3950625 gcggccggcacaagggcggctgcg 3950602
>gb|AE017222.1| Thermus thermophilus HB27 plasmid pTT27, complete sequence Length = 232605 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 ctcgccctcgtcctcctcgccctct 265 ||||||||| ||||||||||||||| Sbjct: 83783 ctcgccctcctcctcctcgccctct 83759
>ref|NM_014233.1| Homo sapiens upstream binding transcription factor, RNA polymerase I (UBTF), mRNA Length = 3097 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 ctcgccctcgtcctcctcgccctcttcatcatcctc 276 |||| ||||||| ||||| |||||||||||||||| Sbjct: 2217 ctcgtcctcgtcatcctcatcctcttcatcatcctc 2182
>ref|NM_127714.1| Arabidopsis thaliana unknown protein AT2G21420 mRNA, complete cds Length = 1407 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtc 282 |||||||||||||||||||| Sbjct: 1265 tcttcatcatcctcatcgtc 1246
>gb|BC101510.1| Homo sapiens transmembrane emp24 protein transport domain containing 8, mRNA (cDNA clone MGC:126559 IMAGE:8069016), complete cds Length = 1056 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 |||||||| ||||||| |||||||||||||| Sbjct: 805 tcctcctcttcctcttcttcatcctcatcgtc 774
>ref|XM_511547.1| PREDICTED: Pan troglodytes upstream binding transcription factor, RNA polymerase I (LOC454726), mRNA Length = 2547 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 ctcgccctcgtcctcctcgccctcttcatcatcctc 276 |||| ||||||| ||||| |||||||||||||||| Sbjct: 2264 ctcgtcctcgtcatcctcatcctcttcatcatcctc 2229
>ref|NM_188433.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1524 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 222 caagtgctgcggcgcgctgctcgc 245 |||| ||||||||||||||||||| Sbjct: 429 caagagctgcggcgcgctgctcgc 452
>ref|XM_470057.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1460 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtc 282 |||||||||||||||||||| Sbjct: 281 tcttcatcatcctcatcgtc 262
>ref|NM_213601.1| Homo sapiens transmembrane emp24 protein transport domain containing 8 (TMED8), mRNA Length = 978 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 |||||||| ||||||| |||||||||||||| Sbjct: 749 tcctcctcttcctcttcttcatcctcatcgtc 718
>ref|XM_472769.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1830 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ccctcgtcctcctcgccctc 264 |||||||||||||||||||| Sbjct: 581 ccctcgtcctcctcgccctc 600
>gb|AY598329.1| Homo sapiens L10 mRNA, complete cds Length = 978 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 |||||||| ||||||| |||||||||||||| Sbjct: 749 tcctcctcttcctcttcttcatcctcatcgtc 718
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 234 cgcgctgctcgccctcgtcctcctcgcc 261 ||||||||||||||||| ||||| |||| Sbjct: 707838 cgcgctgctcgccctcgccctccccgcc 707811
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtc 282 |||||||||||||||||||| Sbjct: 407990 tcttcatcatcctcatcgtc 407971
>ref|XM_362783.1| Magnaporthe grisea 70-15 hypothetical protein (MG08265.4) partial mRNA Length = 1779 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tgcgagtgccaccgccgccg 212 |||||||||||||||||||| Sbjct: 803 tgcgagtgccaccgccgccg 784
>gb|BC055451.1| Mus musculus DEK oncogene (DNA binding), mRNA (cDNA clone MGC:65340 IMAGE:4164972), complete cds Length = 2547 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 ||||||||| ||||||||||||| || ||||| Sbjct: 253 tcctcctcgtcctcttcatcatcgtcttcgtc 222
>ref|XM_610301.2| PREDICTED: Bos taurus similar to RAS and EF hand domain containing (LOC531799), mRNA Length = 1227 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 tcgccctcgtcctcctcgcc 261 |||||||||||||||||||| Sbjct: 932 tcgccctcgtcctcctcgcc 913
>ref|XM_657719.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5207.2), mRNA Length = 891 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgtcctcctcgccctcttca 268 |||||||||||||||||||| Sbjct: 508 cgtcctcctcgccctcttca 489
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtc 282 |||||||||||||||||||| Sbjct: 33728695 tcttcatcatcctcatcgtc 33728676
>gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genomic sequence, complete sequence Length = 159795 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 tcttcatcatcctcatcgtc 282 |||||||||||||||||||| Sbjct: 144545 tcttcatcatcctcatcgtc 144564
>ref|XM_742669.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g03140) partial mRNA Length = 2364 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 cttcatcatcctcatcgtct 283 |||||||||||||||||||| Sbjct: 1452 cttcatcatcctcatcgtct 1471
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gcgcgctgctcgccctcgtc 252 |||||||||||||||||||| Sbjct: 347335 gcgcgctgctcgccctcgtc 347316
>ref|XM_569301.1| Cryptococcus neoformans var. neoformans JEC21 small nucleolar ribonucleoprotein protein (CNB05580) partial mRNA Length = 2331 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 248 tcgtcctcctcgccctcttcatcatcctcatc 279 |||||||| || |||||||||||||| ||||| Sbjct: 785 tcgtcctcgtctccctcttcatcatcatcatc 754
>ref|XM_572684.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNI02640) partial mRNA Length = 822 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 234 cgcgctgctcgccctcgtcctcctcgcc 261 ||||||||||||||||| ||||| |||| Sbjct: 21 cgcgctgctcgccctcgccctccccgcc 48
>ref|XM_570756.1| Cryptococcus neoformans var. neoformans JEC21 cell division control protein 45 (CNE01490) partial mRNA Length = 2119 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtc 282 |||||||||||||||||||| Sbjct: 444 tcttcatcatcctcatcgtc 425
>ref|XM_445878.1| Candida glabrata CBS138, CAGL0E04378g partial mRNA Length = 1749 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 249 cgtcctcctcgccctcttcatcatcctc 276 |||| |||||| |||||||||||||||| Sbjct: 637 cgtcatcctcgtcctcttcatcatcctc 610
>emb|Z49908.1|CEC07E3 Caenorhabditis elegans Cosmid C07E3, complete sequence Length = 43815 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 tcttcatcatcctcatcgtc 282 |||||||||||||||||||| Sbjct: 1823 tcttcatcatcctcatcgtc 1842
>gb|AC117227.3| Mus musculus BAC clone RP23-380C5 from 13, complete sequence Length = 190816 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 ||||||||| ||||||||||||| || ||||| Sbjct: 60623 tcctcctcgtcctcttcatcatcgtcttcgtc 60592
>gb|BC042297.1| Homo sapiens upstream binding transcription factor, RNA polymerase I, mRNA (cDNA clone MGC:48801 IMAGE:4509695), complete cds Length = 4626 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 ctcgccctcgtcctcctcgccctcttcatcatcctc 276 |||| ||||||| ||||| |||||||||||||||| Sbjct: 2160 ctcgtcctcgtcatcctcatcctcttcatcatcctc 2125
>gb|AC154171.5| Mus musculus BAC clone RP24-259F16 from chromosome 13, complete sequence Length = 173300 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 ||||||||| ||||||||||||| || ||||| Sbjct: 127379 tcctcctcgtcctcttcatcatcgtcttcgtc 127348
>gb|DQ072252.1| Caenorhabditis remanei strain EM464 syndecan mRNA, partial cds Length = 554 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtc 282 |||||||||||||||||||| Sbjct: 541 tcttcatcatcctcatcgtc 522
>gb|DQ446542.1| Arabidopsis thaliana clone pENTR221-At2g21420 zinc finger protein-like protein (At2g21420) mRNA, complete cds Length = 1407 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtc 282 |||||||||||||||||||| Sbjct: 1265 tcttcatcatcctcatcgtc 1246
>gb|DQ446540.1| Arabidopsis thaliana clone pENTR221-At2g21420 zinc finger protein-like protein (At2g21420) mRNA, complete cds Length = 1194 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtc 282 |||||||||||||||||||| Sbjct: 1052 tcttcatcatcctcatcgtc 1033
>ref|XM_791077.1| PREDICTED: Strongylocentrotus purpuratus similar to heart of glass (LOC591518), mRNA Length = 2508 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cctcgtcctcctcgccctct 265 |||||||||||||||||||| Sbjct: 966 cctcgtcctcctcgccctct 985
>emb|AL359893.16| Human DNA sequence from clone RP11-35N6 on chromosome 9 Contains the 3' end of a novel gene (FLJ20300), a bile acid Coenzyme A amino acid N-acyltransferase (BAAT) pseudogene, a RINZF zinc finger protein pseudogene, the BAAT gene for bile acid Coenzyme A amino acid N-acyltransferase (glycine N-choloyltransferase) and two novel pseudogenes, complete sequence Length = 146627 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 ccaccatccatatccataat 154 |||||||||||||||||||| Sbjct: 118366 ccaccatccatatccataat 118385
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 cggtgctctgcctcaacgtc 351 |||||||||||||||||||| Sbjct: 703708 cggtgctctgcctcaacgtc 703689
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 tgcaggacctggcggtgctc 339 |||||||||||||||||||| Sbjct: 1738695 tgcaggacctggcggtgctc 1738714
>emb|AL031843.2|HS246D7 Human DNA sequence from clone RP1-246D7 on chromosome 22q13.1-13.33, complete sequence Length = 28011 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 ||||||||| |||| ||||||||||| ||||| Sbjct: 21776 tcctcctcgtcctcctcatcatcctcctcgtc 21807
>gb|AC137507.3| Oryza sativa chromosome 3 BAC OSJNBb0033J23 genomic sequence, complete sequence Length = 126862 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtc 282 |||||||||||||||||||| Sbjct: 100064 tcttcatcatcctcatcgtc 100045
>ref|XM_788587.1| PREDICTED: Strongylocentrotus purpuratus similar to mucin 17 (LOC588928), partial mRNA Length = 8166 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cctcgtcctcctcgccctct 265 |||||||||||||||||||| Sbjct: 7632 cctcgtcctcctcgccctct 7651
>emb|BX018224.1|CNS08M84 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA27CD12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 592 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 248 tcgtcctcctcgccctcttcatcatcctcatc 279 |||||||||||| |||| ||||||||| |||| Sbjct: 71 tcgtcctcctcgtcctcctcatcatccccatc 40
>emb|CR857335.1| Pongo pygmaeus mRNA; cDNA DKFZp469M0132 (from clone DKFZp469M0132) Length = 2581 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtc 282 |||||||||||||||||||| Sbjct: 723 tcttcatcatcctcatcgtc 704
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 249 cgtcctcctcgccctcttcatcatcctc 276 |||| |||||| |||||||||||||||| Sbjct: 421059 cgtcatcctcgtcctcttcatcatcctc 421086
>emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1358B12, complete sequence Length = 131246 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ccctcgtcctcctcgccctc 264 |||||||||||||||||||| Sbjct: 103245 ccctcgtcctcctcgccctc 103264
>emb|BX248262.1|CNSLT1I5W human full-length cDNA clone CS0DN001YD20 of Adult brain of Homo sapiens (human) Length = 1316 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 |||||||| ||||||| |||||||||||||| Sbjct: 174 tcctcctcttcctcttcttcatcctcatcgtc 143
>emb|BX571662.1| Wolinella succinogenes, complete genome; segment 6/7 Length = 349859 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 ctcctcgccctcttcatcatcctc 276 ||||||||||||||||||| |||| Sbjct: 42307 ctcctcgccctcttcatcagcctc 42330
>emb|AL645969.20| Mouse DNA sequence from clone RP23-101H2 on chromosome 11 Contains a novel gene, complete sequence Length = 154687 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 56 ctgcttcctgcttccatcttgctgcagcaccc 87 ||||||||| ||||||||||||| || ||||| Sbjct: 117998 ctgcttcctacttccatcttgctacaccaccc 117967
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 248 tcgtcctcctcgccctcttcatcatcctcatc 279 |||||||| || |||||||||||||| ||||| Sbjct: 1570332 tcgtcctcgtctccctcttcatcatcatcatc 1570363
>gb|AC155270.3| Mus musculus BAC clone RP23-195H19 from chromosome 12, complete sequence Length = 215502 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 245 ccctcgtcctcctcgccctcttcatcatcctc 276 |||||||||||||| |||||||| || ||||| Sbjct: 93212 ccctcgtcctcctccccctcttcctcttcctc 93181
>gb|AY119502.1| Drosophila melanogaster GH12002 full insert cDNA Length = 7838 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cgctgctcgccctcgtcctc 255 |||||||||||||||||||| Sbjct: 5728 cgctgctcgccctcgtcctc 5709
>dbj|AK095650.1| Homo sapiens cDNA FLJ38331 fis, clone FCBBF3025285, moderately similar to Mus musculus peripherial benzodiazepine receptor associated protein (Pap7) mRNA Length = 3547 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 |||||||| ||||||| |||||||||||||| Sbjct: 793 tcctcctcttcctcttcttcatcctcatcgtc 762
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 249 cgtcctcctcgccctcttcatcatcctcatcg 280 |||||||||| |||| ||||||||||||||| Sbjct: 767905 cgtcctcctcatcctcctcatcatcctcatcg 767874
>ref|NM_165581.1| Drosophila melanogaster CG11198-RB, transcript variant B (CG11198), mRNA Length = 7824 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cgctgctcgccctcgtcctc 255 |||||||||||||||||||| Sbjct: 5728 cgctgctcgccctcgtcctc 5709
>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete sequence Length = 125045 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtc 282 |||||||||||||||||||| Sbjct: 68643 tcttcatcatcctcatcgtc 68624
>ref|NM_136498.1| Drosophila melanogaster CG11198-RA, transcript variant A (CG11198), mRNA Length = 8001 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cgctgctcgccctcgtcctc 255 |||||||||||||||||||| Sbjct: 5905 cgctgctcgccctcgtcctc 5886
>gb|AF462563.1| Hemibagrus nemurus clone PCTB3-1 microsatellite sequence Length = 333 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 |||||||| ||||||||||||| |||||||| Sbjct: 111 tcctcctcctcctcttcatcatcatcatcgtc 80
>dbj|AK154013.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430022K17 product:DEK oncogene (DNA binding), full insert sequence Length = 746 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 ||||||||| ||||||||||||| || ||||| Sbjct: 289 tcctcctcgtcctcttcatcatcgtcttcgtc 258
>gb|DP000046.1| Aotus nancymaae target 106 genomic scaffold Length = 387541 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 tctacctggtgctccgcccccaca 304 ||||||||||||||| |||||||| Sbjct: 180947 tctacctggtgctcctcccccaca 180924
>gb|DP000047.1| Saimiri boliviensis boliviensis target 106 genomic scaffold Length = 211360 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 tctacctggtgctccgcccccaca 304 ||||||||||||||| |||||||| Sbjct: 66978 tctacctggtgctcctcccccaca 66955
>dbj|AK012877.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810037P09 product:similar to 5' of DEK PROTEIN [Homo sapiens], full insert sequence Length = 875 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 ||||||||| ||||||||||||| || ||||| Sbjct: 242 tcctcctcgtcctcttcatcatcgtcttcgtc 211
>dbj|AK012615.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700095O07 product:similar to 5' of DEK PROTEIN [Homo sapiens], full insert sequence Length = 894 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 ||||||||| ||||||||||||| || ||||| Sbjct: 248 tcctcctcgtcctcttcatcatcgtcttcgtc 217
>gb|AC008102.18| Homo sapiens chromosome 11 clone bac41i21 map 11q13, complete sequence Length = 126787 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 cccacctccgcctacctcttcacc 381 |||||||| ||||||||||||||| Sbjct: 64468 cccacctcagcctacctcttcacc 64491
>ref|NM_063823.2| Caenorhabditis elegans C07E3.2 (C07E3.2) mRNA, complete cds Length = 2307 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtc 282 |||||||||||||||||||| Sbjct: 340 tcttcatcatcctcatcgtc 321
>dbj|AK033451.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030207I12 product:DEK PROTEIN homolog [Homo sapiens], full insert sequence Length = 2474 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 ||||||||| ||||||||||||| || ||||| Sbjct: 197 tcctcctcgtcctcttcatcatcgtcttcgtc 166
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 tgccaccgccgccggctctaccgc 222 ||||||||||||||| |||||||| Sbjct: 22272395 tgccaccgccgccggatctaccgc 22272418 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 cctcatcgtctacctggtgctccgcccc 300 ||||||||||||||| || ||||||||| Sbjct: 2979603 cctcatcgtctacctcgtcctccgcccc 2979576
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtc 282 |||||||||||||||||||| Sbjct: 33819167 tcttcatcatcctcatcgtc 33819148
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 222 caagtgctgcggcgcgctgctcgc 245 |||| ||||||||||||||||||| Sbjct: 6246695 caagagctgcggcgcgctgctcgc 6246718
>gb|AC007084.7|AC007084 Drosophila melanogaster, chromosome 2R, region 43F-44A, BAC clone BACR26A16, complete sequence Length = 139410 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cgctgctcgccctcgtcctc 255 |||||||||||||||||||| Sbjct: 4110 cgctgctcgccctcgtcctc 4091
>gb|AC004596.2| Homo sapiens chromosome 17, clone CTB-175E5, complete sequence Length = 92000 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 ctcgccctcgtcctcctcgccctcttcatcatcctc 276 |||| ||||||| ||||| |||||||||||||||| Sbjct: 14273 ctcgtcctcgtcatcctcatcctcttcatcatcctc 14238
>gb|AF525490.2| Streptomyces griseus fredericamycin biosynthetic gene cluster, complete sequence Length = 33064 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 ctcgccctcgtcctcctcgccctc 264 |||||||||||||||| ||||||| Sbjct: 26956 ctcgccctcgtcctccccgccctc 26979
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 222 caagtgctgcggcgcgctgctcgc 245 |||| ||||||||||||||||||| Sbjct: 108893 caagagctgcggcgcgctgctcgc 108916
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 222 caagtgctgcggcgcgctgctcgc 245 |||| ||||||||||||||||||| Sbjct: 17761 caagagctgcggcgcgctgctcgc 17784
>gb|AC007954.7|AC007954 Homo sapiens chromosome 14 clone RP11-493G17 and CTD-2516D11 map 14q24.3, complete sequence Length = 210204 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 |||||||| ||||||| |||||||||||||| Sbjct: 130168 tcctcctcttcctcttcttcatcctcatcgtc 130199
>dbj|AB078884.1| Coturnix japonica DNA, major histocompatibility complex region Length = 155564 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 256 ctcgccctcttcatcatcctcatcgtct 283 |||| |||| |||||||||||||||||| Sbjct: 104755 ctcgtcctcatcatcatcctcatcgtct 104782
>dbj|AK104185.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-D07, full insert sequence Length = 1021 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cctcatcgtctacctggtgctccgcccc 300 ||||||||||||||| || ||||||||| Sbjct: 175 cctcatcgtctacctcgtcctccgcccc 202
>gb|AC154635.2| Mus musculus BAC clone RP23-299N21 from 13, complete sequence Length = 157982 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 361 acctccgcctacctcttcaccaccatgc 388 |||||| ||||||| ||||||||||||| Sbjct: 47701 acctcctcctaccttttcaccaccatgc 47674
>dbj|AK070481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048L05, full insert sequence Length = 1056 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cctcatcgtctacctggtgctccgcccc 300 ||||||||||||||| || ||||||||| Sbjct: 299 cctcatcgtctacctcgtcctccgcccc 326
>dbj|AK067585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111A16, full insert sequence Length = 1920 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtc 282 |||||||||||||||||||| Sbjct: 580 tcttcatcatcctcatcgtc 561
>dbj|AK061582.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-H12, full insert sequence Length = 1034 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cctcatcgtctacctggtgctccgcccc 300 ||||||||||||||| || ||||||||| Sbjct: 188 cctcatcgtctacctcgtcctccgcccc 215
>dbj|AK060419.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F10, full insert sequence Length = 1590 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tcttcatcatcctcatcgtc 282 |||||||||||||||||||| Sbjct: 550 tcttcatcatcctcatcgtc 531
>gb|AY107482.1| Zea mays PCO119066 mRNA sequence Length = 1052 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ccttctacctgcaggacctg 330 |||||||||||||||||||| Sbjct: 324 ccttctacctgcaggacctg 343
>emb|AL512547.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0812A04, complete sequence Length = 43144 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ccctcgtcctcctcgccctc 264 |||||||||||||||||||| Sbjct: 27825 ccctcgtcctcctcgccctc 27844
>ref|NM_025900.1| Mus musculus DEK oncogene (DNA binding) (Dek), mRNA Length = 2474 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 ||||||||| ||||||||||||| || ||||| Sbjct: 197 tcctcctcgtcctcttcatcatcgtcttcgtc 166
>gb|AE003839.4| Drosophila melanogaster chromosome 2R, section 11 of 73 of the complete sequence Length = 254177 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 cgctgctcgccctcgtcctc 255 |||||||||||||||||||| Sbjct: 188078 cgctgctcgccctcgtcctc 188097
>dbj|AP000822.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-675B4, complete sequence Length = 94501 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 cccacctccgcctacctcttcacc 381 |||||||| ||||||||||||||| Sbjct: 15366 cccacctcagcctacctcttcacc 15343
>gb|AC131325.8| Mus musculus chromosome 17, clone RP23-431O10, complete sequence Length = 191331 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 ctcgccctcgtcctcctcgccctc 264 |||| ||||||||||||||||||| Sbjct: 39906 ctcgtcctcgtcctcctcgccctc 39929
>gb|AC096628.14| Mus musculus strain C57BL/6J chromosome 13 clone rp23-81n4, complete sequence Length = 194818 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 251 tcctcctcgccctcttcatcatcctcatcgtc 282 ||||||||| ||||||||||||| || ||||| Sbjct: 179194 tcctcctcgtcctcttcatcatcgtcttcgtc 179225
>gb|AC005448.1|AC005448 Drosophila melanogaster, chromosome 2R, region 44A2-44A3, P1 clone DS06886, complete sequence Length = 86889 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 cgctgctcgccctcgtcctc 255 |||||||||||||||||||| Sbjct: 51252 cgctgctcgccctcgtcctc 51271
>dbj|AB021656.1| Trichoderma viride gene for cellobiohydrolase I, complete cds Length = 4176 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 cctcctcgccctcttcatca 271 |||||||||||||||||||| Sbjct: 4165 cctcctcgccctcttcatca 4146
>gb|AC158383.3| Mus musculus BAC clone RP23-135O16 from chromosome 12, complete sequence Length = 196552 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 245 ccctcgtcctcctcgccctcttcatcatcctc 276 |||||||||||||| |||||||| || ||||| Sbjct: 24002 ccctcgtcctcctccccctcttcctcttcctc 24033
>gb|U65487.1|HSU65487 Human ribosomal RNA upstream binding transcription factor (UBTF) gene, partial cds Length = 7032 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 ctcgccctcgtcctcctcgccctcttcatcatcctc 276 |||| ||||||| ||||| |||||||||||||||| Sbjct: 6323 ctcgtcctcgtcatcctcatcctcttcatcatcctc 6288
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 tgccaccgccgccggctctaccgc 222 ||||||||||||||| |||||||| Sbjct: 22200740 tgccaccgccgccggatctaccgc 22200763 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 cctcatcgtctacctggtgctccgcccc 300 ||||||||||||||| || ||||||||| Sbjct: 2979547 cctcatcgtctacctcgtcctccgcccc 2979520
>emb|AL731741.5|CNS08C7Q Oryza sativa chromosome 12, . BAC OJ1298_D03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109610 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 199 tgccaccgccgccggctctaccgc 222 ||||||||||||||| |||||||| Sbjct: 89359 tgccaccgccgccggatctaccgc 89336
>emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb0059G18 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145661 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cctcatcgtctacctggtgctccgcccc 300 ||||||||||||||| || ||||||||| Sbjct: 36499 cctcatcgtctacctcgtcctccgcccc 36526
>emb|X53461.1|HSUBF Human mRNA for upstream binding factor (hUBF) Length = 3097 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 ctcgccctcgtcctcctcgccctcttcatcatcctc 276 |||| ||||||| ||||| |||||||||||||||| Sbjct: 2217 ctcgtcctcgtcatcctcatcctcttcatcatcctc 2182
>emb|X53390.1|HSHUBF Human mRNA for upstream binding factor (hUBF) Length = 3097 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 ctcgccctcgtcctcctcgccctcttcatcatcctc 276 |||| ||||||| ||||| |||||||||||||||| Sbjct: 2217 ctcgtcctcgtcatcctcatcctcttcatcatcctc 2182
>emb|X56687.1|HSAUTNOR H.sapiens mRNA for autoantigen NOR-90 Length = 2489 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 ctcgccctcgtcctcctcgccctcttcatcatcctc 276 |||| ||||||| ||||| |||||||||||||||| Sbjct: 2138 ctcgtcctcgtcatcctcatcctcttcatcatcctc 2103
>emb|AL713838.1|CNS07YOS Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 278H24 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 150493 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 56 ctgcttcctgcttccatcttgctgcagcaccc 87 ||||||||| ||||||||||||| || ||||| Sbjct: 68162 ctgcttcctacttccatcttgctacaccaccc 68193 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,468,326 Number of Sequences: 3902068 Number of extensions: 3468326 Number of successful extensions: 100554 Number of sequences better than 10.0: 192 Number of HSP's better than 10.0 without gapping: 196 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98631 Number of HSP's gapped (non-prelim): 1923 length of query: 395 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 373 effective length of database: 17,147,199,772 effective search space: 6395905514956 effective search space used: 6395905514956 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
