ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart53h02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK071066.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 1e-44
2gb|AY104216.1| Zea mays PCO109946 mRNA sequence 145 1e-31
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 103 4e-19
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 103 4e-19
5emb|AL731756.4|CNS08C85 Oryza sativa chromosome 12, . BAC OJ1220... 103 4e-19
6ref|NM_118616.3| Arabidopsis thaliana ATP binding / argininosucc... 96 1e-16
7gb|AY091319.1| Arabidopsis thaliana putative argininosuccinate s... 96 1e-16
8gb|AY065252.1| Arabidopsis thaliana putative argininosuccinate s... 96 1e-16
9emb|BX827386.1|CNS0A2HY Arabidopsis thaliana Full-length cDNA Co... 96 1e-16
10emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, ... 66 9e-08
11emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC... 66 9e-08
12ref|XM_396374.2| PREDICTED: Apis mellifera similar to Zgc:92051 ... 54 4e-04
13gb|AC126782.23| Medicago truncatula clone mth2-14p11, complete s... 46 0.088
14ref|XM_744235.1| Aspergillus fumigatus Af293 haloacid dehalogena... 42 1.4
15emb|CT009609.1| Desulfococcus multivorans vrl island 42 1.4
16gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence 40 5.4
17gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
18gb|AC072054.10| Homo sapiens BAC clone RP11-33P21 from 7, comple... 40 5.4
19ref|XM_501408.1| Yarrowia lipolytica CLIB122, YALI0C03652g predi... 40 5.4
20gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 5.4
21emb|AL078624.24|HSDJ799G3 Human DNA sequence from clone RP4-799G... 40 5.4
22dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 5.4
23dbj|AB168627.1| Macaca fascicularis testis cDNA clone: QtsA-1362... 40 5.4
24dbj|AB168273.1| Macaca fascicularis testis cDNA clone: QtsA-1087... 40 5.4
25dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
26dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
27gb|AE009576.1| Brucella melitensis 16M chromosome I, section 133... 40 5.4
28dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
29dbj|AK110627.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
30dbj|AK109596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
31gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 40 5.4
32gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 5.4
33emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 5.4
34gb|U01148.1|CHKSRC3 Gallus gallus c-src protein (c-src) gene, co... 40 5.4

>dbj|AK071066.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081B09, full
           insert sequence
          Length = 1752

 Score =  188 bits (95), Expect = 1e-44
 Identities = 136/152 (89%)
 Strand = Plus / Plus

                                                                       
Query: 254 tgatgaaaagaaaggtggattgcgtggcaaactnnnnnnngttgttctagcttacagcgg 313
           |||| |||||||||||||| |||||||||||||       ||||||||||||||||| ||
Sbjct: 265 tgatcaaaagaaaggtggactgcgtggcaaactgaataaagttgttctagcttacagtgg 324

                                                                       
Query: 314 tggcttggatacatcagtaattgttccatggcttagggagaactatggctgtgaagtcgt 373
           ||| |||||||||||||| ||||||||||||||  ||||||||||||| |||||||| ||
Sbjct: 325 tggtttggatacatcagttattgttccatggctccgggagaactatggttgtgaagttgt 384

                                           
Query: 374 ctgtttcactgctgatgttggccagggtgaca 405
           ||||||||||||||||||||||||||||||||
Sbjct: 385 ctgtttcactgctgatgttggccagggtgaca 416



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>gb|AY104216.1| Zea mays PCO109946 mRNA sequence
          Length = 1750

 Score =  145 bits (73), Expect = 1e-31
 Identities = 100/109 (91%)
 Strand = Plus / Plus

                                                                       
Query: 294 gttgttctagcttacagcggtggcttggatacatcagtaattgttccatggcttagggag 353
           |||||| ||||||| || ||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 350 gttgttttagcttatagtggtggtttggatacatccgttattgttccatggctcagggag 409

                                                            
Query: 354 aactatggctgtgaagtcgtctgtttcactgctgatgttggccagggtg 402
           |||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 410 aactatggttgtgaagtcgtttgtttcactgctgatgttggccagggtg 458



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  103 bits (52), Expect = 4e-19
 Identities = 81/93 (87%)
 Strand = Plus / Plus

                                                                           
Query: 254     tgatgaaaagaaaggtggattgcgtggcaaactnnnnnnngttgttctagcttacagcgg 313
               |||| |||||||||||||| |||||||||||||       ||||||||||||||||| ||
Sbjct: 7430601 tgatcaaaagaaaggtggactgcgtggcaaactgaataaagttgttctagcttacagtgg 7430660

                                                
Query: 314     tggcttggatacatcagtaattgttccatggct 346
               ||| |||||||||||||| ||||||||||||||
Sbjct: 7430661 tggtttggatacatcagttattgttccatggct 7430693



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                   
Query: 348     agggagaactatggctgtgaagtcgtctgtttcactgctgatgttggccagg 399
               |||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 7430794 agggagaactatggttgtgaagttgtctgtttcactgctgatgttggccagg 7430845



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  103 bits (52), Expect = 4e-19
 Identities = 81/93 (87%)
 Strand = Plus / Plus

                                                                           
Query: 254     tgatgaaaagaaaggtggattgcgtggcaaactnnnnnnngttgttctagcttacagcgg 313
               |||| |||||||||||||| |||||||||||||       ||||||||||||||||| ||
Sbjct: 7430480 tgatcaaaagaaaggtggactgcgtggcaaactgaataaagttgttctagcttacagtgg 7430539

                                                
Query: 314     tggcttggatacatcagtaattgttccatggct 346
               ||| |||||||||||||| ||||||||||||||
Sbjct: 7430540 tggtttggatacatcagttattgttccatggct 7430572



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                   
Query: 348     agggagaactatggctgtgaagtcgtctgtttcactgctgatgttggccagg 399
               |||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 7430673 agggagaactatggttgtgaagttgtctgtttcactgctgatgttggccagg 7430724



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>emb|AL731756.4|CNS08C85 Oryza sativa chromosome 12, . BAC OJ1220_D01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 98782

 Score =  103 bits (52), Expect = 4e-19
 Identities = 81/93 (87%)
 Strand = Plus / Plus

                                                                         
Query: 254   tgatgaaaagaaaggtggattgcgtggcaaactnnnnnnngttgttctagcttacagcgg 313
             |||| |||||||||||||| |||||||||||||       ||||||||||||||||| ||
Sbjct: 20277 tgatcaaaagaaaggtggactgcgtggcaaactgaataaagttgttctagcttacagtgg 20336

                                              
Query: 314   tggcttggatacatcagtaattgttccatggct 346
             ||| |||||||||||||| ||||||||||||||
Sbjct: 20337 tggtttggatacatcagttattgttccatggct 20369



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                 
Query: 348   agggagaactatggctgtgaagtcgtctgtttcactgctgatgttggccagg 399
             |||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 20470 agggagaactatggttgtgaagttgtctgtttcactgctgatgttggccagg 20521



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>ref|NM_118616.3| Arabidopsis thaliana ATP binding / argininosuccinate synthase
           AT4G24830 mRNA, complete cds
          Length = 1750

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                       
Query: 297 gttctagcttacagcggtggcttggatacatcagtaattgttccatggcttagggagaac 356
           |||||||||||||| || ||||| || || || || ||||| |||||||||| |||||||
Sbjct: 351 gttctagcttacagtggaggcttagacacctctgtcattgtgccatggcttaaggagaac 410

                                                       
Query: 357 tatggctgtgaagtcgtctgtttcactgctgatgttggccaggg 400
           ||||| |||||||| || || ||||||||||||||||| |||||
Sbjct: 411 tatggttgtgaagttgtgtgcttcactgctgatgttggtcaggg 454



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>gb|AY091319.1| Arabidopsis thaliana putative argininosuccinate synthase
           (At4g24830) mRNA, complete cds
          Length = 1516

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                       
Query: 297 gttctagcttacagcggtggcttggatacatcagtaattgttccatggcttagggagaac 356
           |||||||||||||| || ||||| || || || || ||||| |||||||||| |||||||
Sbjct: 298 gttctagcttacagtggaggcttagacacctctgtcattgtgccatggcttaaggagaac 357

                                                       
Query: 357 tatggctgtgaagtcgtctgtttcactgctgatgttggccaggg 400
           ||||| |||||||| || || ||||||||||||||||| |||||
Sbjct: 358 tatggttgtgaagttgtgtgcttcactgctgatgttggtcaggg 401



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>gb|AY065252.1| Arabidopsis thaliana putative argininosuccinate synthase
           (At4g24830) mRNA, complete cds
          Length = 1718

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                       
Query: 297 gttctagcttacagcggtggcttggatacatcagtaattgttccatggcttagggagaac 356
           |||||||||||||| || ||||| || || || || ||||| |||||||||| |||||||
Sbjct: 351 gttctagcttacagtggaggcttagacacctctgtcattgtgccatggcttaaggagaac 410

                                                       
Query: 357 tatggctgtgaagtcgtctgtttcactgctgatgttggccaggg 400
           ||||| |||||||| || || ||||||||||||||||| |||||
Sbjct: 411 tatggttgtgaagttgtgtgcttcactgctgatgttggtcaggg 454



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>emb|BX827386.1|CNS0A2HY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS48ZH08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1721

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                       
Query: 297 gttctagcttacagcggtggcttggatacatcagtaattgttccatggcttagggagaac 356
           |||||||||||||| || ||||| || || || || ||||| |||||||||| |||||||
Sbjct: 332 gttctagcttacagtggaggcttagacacctctgtcattgtgccatggcttaaggagaac 391

                                                       
Query: 357 tatggctgtgaagtcgtctgtttcactgctgatgttggccaggg 400
           ||||| |||||||| || || ||||||||||||||||| |||||
Sbjct: 392 tatggttgtgaagttgtgtgcttcactgctgatgttggtcaggg 435



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>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62
          Length = 197070

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                  
Query: 347   tagggagaactatggctgtgaagtcgtctgtttcactgctgatgttggccagg 399
             ||||||||||||||| |||||||| || || ||||||||||||||||| ||||
Sbjct: 69297 tagggagaactatggttgtgaagttgtgtgcttcactgctgatgttggtcagg 69245



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                 
Query: 297   gttctagcttacagcggtggcttggatacatcagtaattgttccatggctta 348
             |||||||||||||| || ||||| || || || || ||||| ||||||||||
Sbjct: 69466 gttctagcttacagtggaggcttagacacctctgtcattgtgccatggctta 69415



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>emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC clone  F6I7 (ESSA project)
          Length = 95185

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                  
Query: 347   tagggagaactatggctgtgaagtcgtctgtttcactgctgatgttggccagg 399
             ||||||||||||||| |||||||| || || ||||||||||||||||| ||||
Sbjct: 39873 tagggagaactatggttgtgaagttgtgtgcttcactgctgatgttggtcagg 39821



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                 
Query: 297   gttctagcttacagcggtggcttggatacatcagtaattgttccatggctta 348
             |||||||||||||| || ||||| || || || || ||||| ||||||||||
Sbjct: 40042 gttctagcttacagtggaggcttagacacctctgtcattgtgccatggctta 39991



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>ref|XM_396374.2| PREDICTED: Apis mellifera similar to Zgc:92051 (LOC412923), mRNA
          Length = 1239

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 294 gttgttctagcttacagcggtggcttggatacatc 328
           |||||||||||||| |||||||||||||| |||||
Sbjct: 22  gttgttctagcttatagcggtggcttggacacatc 56



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>gb|AC126782.23| Medicago truncatula clone mth2-14p11, complete sequence
          Length = 135659

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 351   gagaactatggctgtgaagtcgtctgtttcactgctgat 389
             ||||||||||||||||| || || || ||||||||||||
Sbjct: 25778 gagaactatggctgtgatgttgtttgcttcactgctgat 25740



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>ref|XM_744235.1| Aspergillus fumigatus Af293 haloacid dehalogenase-like hydrolase
           (Afu2g01930) partial mRNA
          Length = 1524

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 33  agtcttccacccccgccgccc 53
           |||||||||||||||||||||
Sbjct: 639 agtcttccacccccgccgccc 659



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>emb|CT009609.1| Desulfococcus multivorans vrl island
          Length = 89210

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 61   cgctcccgatgcgccgcctcg 81
            |||||||||||||||||||||
Sbjct: 6891 cgctcccgatgcgccgcctcg 6871



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>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     ccccgccgcccaccatgccg 62
              ||||||||||||||||||||
Sbjct: 540362 ccccgccgcccaccatgccg 540343



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>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02,
             complete sequence
          Length = 99795

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 69    atgcgccgcctcgccgctgctccgtcgc 96
             ||||||| ||||| ||||||||||||||
Sbjct: 84825 atgcgccacctcggcgctgctccgtcgc 84798



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>gb|AC072054.10| Homo sapiens BAC clone RP11-33P21 from 7, complete sequence
          Length = 154037

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    gacccaagtcttccaccccc 46
             ||||||||||||||||||||
Sbjct: 76545 gacccaagtcttccaccccc 76564



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>ref|XM_501408.1| Yarrowia lipolytica CLIB122, YALI0C03652g predicted mRNA
          Length = 1641

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 381 actgctgatgttggccaggg 400
           ||||||||||||||||||||
Sbjct: 691 actgctgatgttggccaggg 672



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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 65      cccgatgcgccgcctcgccgctgc 88
               |||||||||||||| |||||||||
Sbjct: 1198632 cccgatgcgccgccccgccgctgc 1198655



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>emb|AL078624.24|HSDJ799G3 Human DNA sequence from clone RP4-799G3 on chromosome 1q42.11-42.3
             Contains STSs and GSSs, complete sequence
          Length = 127639

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 320   ggatacatcagtaattgttccatg 343
             ||||||||||| ||||||||||||
Sbjct: 81330 ggatacatcaggaattgttccatg 81353



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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 143    gctccggcgacaacatggccgggt 166
              |||||||||||||| |||||||||
Sbjct: 917899 gctccggcgacaacgtggccgggt 917876



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>dbj|AB168627.1| Macaca fascicularis testis cDNA clone: QtsA-13625, similar to
          human methionine adenosyltransferase II, alpha (MAT2A),
          mRNA, RefSeq: NM_005911.4
          Length = 2005

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 73 gccgcctcgccgctgctccgtcgc 96
          ||||||||||||||||||| ||||
Sbjct: 69 gccgcctcgccgctgctccttcgc 92



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>dbj|AB168273.1| Macaca fascicularis testis cDNA clone: QtsA-10874, similar to human
           methionine adenosyltransferase II, alpha (MAT2A), mRNA,
           RefSeq: NM_005911.4
          Length = 2870

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 73  gccgcctcgccgctgctccgtcgc 96
           ||||||||||||||||||| ||||
Sbjct: 102 gccgcctcgccgctgctccttcgc 125



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 137      cgttcggctccggcgacaac 156
                ||||||||||||||||||||
Sbjct: 18333558 cgttcggctccggcgacaac 18333577



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 69       atgcgccgcctcgccgctgctccgtcgc 96
                ||||||| ||||| ||||||||||||||
Sbjct: 24482152 atgcgccacctcggcgctgctccgtcgc 24482125



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>gb|AE009576.1| Brucella melitensis 16M chromosome I, section 133 of 195 of the
            complete sequence
          Length = 10598

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 43   ccccgccgcccaccatgccg 62
            ||||||||||||||||||||
Sbjct: 8398 ccccgccgcccaccatgccg 8417



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>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0463G11
          Length = 154188

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   cgttcggctccggcgacaac 156
             ||||||||||||||||||||
Sbjct: 48294 cgttcggctccggcgacaac 48313



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>dbj|AK110627.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-B04, full
           insert sequence
          Length = 1006

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 69  atgcgccgcctcgccgctgctccgtcgc 96
           ||||||| ||||| ||||||||||||||
Sbjct: 122 atgcgccacctcggcgctgctccgtcgc 95



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>dbj|AK109596.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-D05, full
           insert sequence
          Length = 2103

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 137 cgttcggctccggcgacaac 156
           ||||||||||||||||||||
Sbjct: 737 cgttcggctccggcgacaac 756



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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     ccgctcccgatgcgccgcct 79
              ||||||||||||||||||||
Sbjct: 230694 ccgctcccgatgcgccgcct 230713



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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 143    gctccggcgacaacatggccgggt 166
              |||||||||||||| |||||||||
Sbjct: 948091 gctccggcgacaacgtggccgggt 948068



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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 381    actgctgatgttggccaggg 400
              ||||||||||||||||||||
Sbjct: 485226 actgctgatgttggccaggg 485245



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>gb|U01148.1|CHKSRC3 Gallus gallus c-src protein (c-src) gene, complete cds
          Length = 2048

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 42   cccccgccgcccaccatgccgctc 65
            |||||||| |||||||||||||||
Sbjct: 1967 cccccgccccccaccatgccgctc 1944


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,115,036
Number of Sequences: 3902068
Number of extensions: 3115036
Number of successful extensions: 61239
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60932
Number of HSP's gapped (non-prelim): 303
length of query: 405
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 383
effective length of database: 17,147,199,772
effective search space: 6567377512676
effective search space used: 6567377512676
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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