ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart53g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome... 119 8e-24
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 119 8e-24
3emb|AL669991.1|NCB11B23 Neurospora crassa DNA linkage group II B... 44 0.38
4emb|AL669985.1|NC43E3 Neurospora crassa DNA linkage group II Cos... 44 0.38
5gb|AC113189.11| Homo sapiens chromosome 17, clone RP11-104H15, c... 42 1.5
6gb|AF376802.1| Homo sapiens neuroligin 2 mRNA, complete cds 42 1.5
7gb|AC015688.11| Homo sapiens chromosome 17, clone RP11-19P22, co... 42 1.5
8ref|NM_020795.2| Homo sapiens neuroligin 2 (NLGN2), mRNA 42 1.5
9gb|AC107983.3| Homo sapiens chromosome 17, clone CTD-2303H24, co... 42 1.5
10ref|NG_001568.1| Homo sapiens nitric oxide synthase 2A (inducibl... 42 1.5
11tpg|BK001590.1| TPA: TPA_exp: Homo sapiens chromosome 17 middle ... 42 1.5
12gb|DQ060518.1| Homo sapiens nitric oxide synthase 2A (inducible,... 42 1.5
13gb|AC130289.11| Homo sapiens chromosome 17, clone RP1-66C13, com... 42 1.5
14emb|AL353997.3|HS37N07 Homo sapiens chromosome 17 from PAC RPCI... 42 1.5
15emb|AL354047.6|HS66C13 Homo sapiens chromosome 17 from PAC RPCI-... 42 1.5
16dbj|AB037787.1| Homo sapiens mRNA for KIAA1366 protein, partial cds 42 1.5
17ref|NM_189656.1| Oryza sativa (japonica cultivar-group), predic... 40 5.9
18ref|XM_639221.1| Dictyostelium discoideum hypothetical protein (... 40 5.9
19ref|XM_468173.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.9
20ref|XM_876095.1| PREDICTED: Bos taurus EST00848 homolog, transcr... 40 5.9
21ref|XM_876022.1| PREDICTED: Bos taurus EST00848 homolog, transcr... 40 5.9
22ref|XM_585822.2| PREDICTED: Bos taurus EST00848 homolog, transcr... 40 5.9
23ref|XM_875877.1| PREDICTED: Bos taurus EST00848 homolog, transcr... 40 5.9
24ref|XM_865341.1| PREDICTED: Bos taurus EST00848 homolog, transcr... 40 5.9
25gb|AC124693.4| Mus musculus BAC clone RP24-167O14 from chromosom... 40 5.9
26ref|XM_722815.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 5.9
27emb|AL390059.10| Human DNA sequence from clone RP11-399E10 on ch... 40 5.9
28emb|AL023754.1|HS272L16 Human DNA sequence from clone RP1-272L16... 40 5.9
29gb|AC010008.5| Drosophila melanogaster 3L BAC RP98-13N15 (Roswel... 40 5.9
30gb|AC093436.2| Drosophila melanogaster 3L BAC RP98-1O14 (Roswell... 40 5.9
31dbj|AK126094.1| Homo sapiens cDNA FLJ44106 fis, clone TESTI4044234 40 5.9
32ref|NM_001012982.1| Homo sapiens hypothetical gene supported by ... 40 5.9
33gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell... 40 5.9
34gb|AC073880.5|AC073880 Homo sapiens BAC clone RP11-1136L22 from ... 40 5.9
35dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
36dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
37gb|AC122686.6| Homo sapiens 12 BAC RP11-295J2 (Roswell Park Canc... 40 5.9
38gb|AC116956.2| Dictyostelium discoideum chromosome 2 map 1418423... 40 5.9
39gb|AC119253.7| Mus musculus chromosome 15, clone RP24-279A15, co... 40 5.9
40dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
41gb|BC043530.1| Homo sapiens hypothetical gene supported by BC043... 40 5.9
42dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
43dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
44dbj|AK120525.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
45emb|BX957260.10| Zebrafish DNA sequence from clone DKEY-1N7 in l... 40 5.9
46gb|AC124627.22| Mus musculus chromosome 19, clone RP23-435K14, c... 40 5.9
47gb|AE003540.3| Drosophila melanogaster chromosome 3L, section 45... 40 5.9
48gb|AC119183.8| Mus musculus chromosome 15, clone RP24-172H2, com... 40 5.9
49gb|AC005516.1|AC005516 Homo sapiens Chromosome 4p16.3 BAC clone ... 40 5.9
50emb|Z69837.1|HSL113B6 Human DNA sequence from clone LA04NC01-113... 40 5.9
51emb|AL626765.22| Mouse DNA sequence from clone RP23-179N14 on ch... 40 5.9 
>gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1119_H02,
             complete sequence
          Length = 138584

 Score =  119 bits (60), Expect = 8e-24
 Identities = 114/132 (86%)
 Strand = Plus / Minus

                                                                         
Query: 178   gaaggatttgcgatatggcagaagctgccatcacgcggtactggtgccatgaatgtcagc 237
             ||||||||||| | |||||||||||||| |||||  |||||||||||||||||||  |||
Sbjct: 83884 gaaggatttgcaagatggcagaagctgcaatcacaaggtactggtgccatgaatgcgagc 83825

                                                                         
Query: 238   aggccgttgaggaggccatggtggaggagctcaagtgtccattgtgtgacggtgggtttg 297
             ||||| ||||||||||||||||||| ||| ||||||| ||||  ||||  || ||||| |
Sbjct: 83824 aggccattgaggaggccatggtggatgagatcaagtgcccatcctgtggtggcgggttcg 83765

                         
Query: 298   tcgaagagatga 309
             | ||||||||||
Sbjct: 83764 ttgaagagatga 83753
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  119 bits (60), Expect = 8e-24
 Identities = 114/132 (86%)
 Strand = Plus / Minus

                                                                            
Query: 178      gaaggatttgcgatatggcagaagctgccatcacgcggtactggtgccatgaatgtcagc 237
                ||||||||||| | |||||||||||||| |||||  |||||||||||||||||||  |||
Sbjct: 23880049 gaaggatttgcaagatggcagaagctgcaatcacaaggtactggtgccatgaatgcgagc 23879990

                                                                            
Query: 238      aggccgttgaggaggccatggtggaggagctcaagtgtccattgtgtgacggtgggtttg 297
                ||||| ||||||||||||||||||| ||| ||||||| ||||  ||||  || ||||| |
Sbjct: 23879989 aggccattgaggaggccatggtggatgagatcaagtgcccatcctgtggtggcgggttcg 23879930

                            
Query: 298      tcgaagagatga 309
                | ||||||||||
Sbjct: 23879929 ttgaagagatga 23879918
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>emb|AL669991.1|NCB11B23 Neurospora crassa DNA linkage group II BAC clone B11B23
          Length = 79554

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 85    atccaatccgatccaatccactccac 110
             ||||||||| ||||||||||||||||
Sbjct: 79193 atccaatccaatccaatccactccac 79218
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>emb|AL669985.1|NC43E3 Neurospora crassa DNA linkage group II Cosmid clone 43E3
          Length = 42057

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 85    atccaatccgatccaatccactccac 110
             ||||||||| ||||||||||||||||
Sbjct: 41705 atccaatccaatccaatccactccac 41680
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>gb|AC113189.11| Homo sapiens chromosome 17, clone RP11-104H15, complete sequence
          Length = 184349

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 104   actccacaggagaaaagccag 124
             |||||||||||||||||||||
Sbjct: 67979 actccacaggagaaaagccag 67959
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>gb|AF376802.1| Homo sapiens neuroligin 2 mRNA, complete cds
          Length = 2793

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 104  actccacaggagaaaagccag 124
            |||||||||||||||||||||
Sbjct: 2678 actccacaggagaaaagccag 2658
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>gb|AC015688.11| Homo sapiens chromosome 17, clone RP11-19P22, complete sequence
          Length = 152351

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 419   tgatgaagataatagtgatat 439
             |||||||||||||||||||||
Sbjct: 50703 tgatgaagataatagtgatat 50723
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>ref|NM_020795.2| Homo sapiens neuroligin 2 (NLGN2), mRNA
          Length = 4642

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 104  actccacaggagaaaagccag 124
            |||||||||||||||||||||
Sbjct: 2678 actccacaggagaaaagccag 2658
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>gb|AC107983.3| Homo sapiens chromosome 17, clone CTD-2303H24, complete sequence
          Length = 130561

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 419   tgatgaagataatagtgatat 439
             |||||||||||||||||||||
Sbjct: 36277 tgatgaagataatagtgatat 36257
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>ref|NG_001568.1| Homo sapiens nitric oxide synthase 2A (inducible, hepatocytes)
            pseudogene (LOC201288) on chromosome 17
          Length = 6396

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 419  tgatgaagataatagtgatat 439
            |||||||||||||||||||||
Sbjct: 4631 tgatgaagataatagtgatat 4651
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>tpg|BK001590.1| TPA: TPA_exp: Homo sapiens chromosome 17 middle SMS-REP low-copy repeat,
              genomic sequence
          Length = 240806

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 419    tgatgaagataatagtgatat 439
              |||||||||||||||||||||
Sbjct: 113673 tgatgaagataatagtgatat 113653
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>gb|DQ060518.1| Homo sapiens nitric oxide synthase 2A (inducible, hepatocytes) (NOS2A)
             gene, complete cds
          Length = 47758

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 419   tgatgaagataatagtgatat 439
             |||||||||||||||||||||
Sbjct: 44099 tgatgaagataatagtgatat 44119
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>gb|AC130289.11| Homo sapiens chromosome 17, clone RP1-66C13, complete sequence
          Length = 136599

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 419   tgatgaagataatagtgatat 439
             |||||||||||||||||||||
Sbjct: 65219 tgatgaagataatagtgatat 65199
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>emb|AL353997.3|HS37N07 Homo sapiens chromosome 17 from PAC  RPCI-1 37N07 map 17p11.2 region
              D17S842-D17S953, complete sequence
          Length = 175103

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 419    tgatgaagataatagtgatat 439
              |||||||||||||||||||||
Sbjct: 167545 tgatgaagataatagtgatat 167525
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>emb|AL354047.6|HS66C13 Homo sapiens chromosome 17 from PAC RPCI-1 66C13 map 17p11.2 region
             D17S842-D17S953, complete sequence
          Length = 156907

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 419   tgatgaagataatagtgatat 439
             |||||||||||||||||||||
Sbjct: 65219 tgatgaagataatagtgatat 65199
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>dbj|AB037787.1| Homo sapiens mRNA for KIAA1366 protein, partial cds
          Length = 3716

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 104  actccacaggagaaaagccag 124
            |||||||||||||||||||||
Sbjct: 1752 actccacaggagaaaagccag 1732
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>ref|NM_189656.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1800

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 82  tccatccaatccgatccaatccac 105
           |||||||||||| |||||||||||
Sbjct: 196 tccatccaatccaatccaatccac 219
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>ref|XM_639221.1| Dictyostelium discoideum hypothetical protein (DDB0217593), partial
            mRNA
          Length = 4461

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 417  gatgatgaagataatagtga 436
            ||||||||||||||||||||
Sbjct: 1202 gatgatgaagataatagtga 1183
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>ref|XM_468173.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1880

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 82   tccatccaatccgatccaatccac 105
            |||||||||||| |||||||||||
Sbjct: 1736 tccatccaatccaatccaatccac 1713
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>ref|XM_876095.1| PREDICTED: Bos taurus EST00848 homolog, transcript variant 5
           (LOC404110), mRNA
          Length = 2370

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  cctgttcttctttggtttgg 29
           ||||||||||||||||||||
Sbjct: 600 cctgttcttctttggtttgg 581
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>ref|XM_876022.1| PREDICTED: Bos taurus EST00848 homolog, transcript variant 4
           (LOC404110), mRNA
          Length = 2132

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  cctgttcttctttggtttgg 29
           ||||||||||||||||||||
Sbjct: 362 cctgttcttctttggtttgg 343
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>ref|XM_585822.2| PREDICTED: Bos taurus EST00848 homolog, transcript variant 1
            (LOC404110), mRNA
          Length = 2786

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   cctgttcttctttggtttgg 29
            ||||||||||||||||||||
Sbjct: 1016 cctgttcttctttggtttgg 997
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>ref|XM_875877.1| PREDICTED: Bos taurus EST00848 homolog, transcript variant 3
           (LOC404110), mRNA
          Length = 2723

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  cctgttcttctttggtttgg 29
           ||||||||||||||||||||
Sbjct: 953 cctgttcttctttggtttgg 934
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>ref|XM_865341.1| PREDICTED: Bos taurus EST00848 homolog, transcript variant 2
           (LOC404110), mRNA
          Length = 2663

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  cctgttcttctttggtttgg 29
           ||||||||||||||||||||
Sbjct: 893 cctgttcttctttggtttgg 874
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>gb|AC124693.4| Mus musculus BAC clone RP24-167O14 from chromosome 19, complete
             sequence
          Length = 160363

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   ccacaggagaaaagccaggg 126
             ||||||||||||||||||||
Sbjct: 36025 ccacaggagaaaagccaggg 36044
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>ref|XM_722815.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY07115)
            partial mRNA
          Length = 1275

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 414  agcgatgatgaagataatagtgat 437
            ||||||| ||||||||||||||||
Sbjct: 1174 agcgatggtgaagataatagtgat 1197
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>emb|AL390059.10| Human DNA sequence from clone RP11-399E10 on chromosome 4, complete
             sequence
          Length = 200379

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   ggaggccatggtggaggagc 267
             ||||||||||||||||||||
Sbjct: 15824 ggaggccatggtggaggagc 15805
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>emb|AL023754.1|HS272L16 Human DNA sequence from clone RP1-272L16 on chromosome 1q32.1-32.3
              Contains a novel gene, the CAMK1G gene for
              calcium/calmodulin-dependent protein kinase IG  and the 3'
              end of the LAMB3 gene for laminin beta 3, complete sequence
          Length = 157875

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 82     tccatccaatccgatccaatccactcca 109
              |||||||||||| |||||||||| ||||
Sbjct: 122881 tccatccaatccaatccaatccaatcca 122854
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>gb|AC010008.5| Drosophila melanogaster 3L BAC RP98-13N15 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 158719

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 90   atccgatccaatccactcca 109
            ||||||||||||||||||||
Sbjct: 6580 atccgatccaatccactcca 6599
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>gb|AC093436.2| Drosophila melanogaster 3L BAC RP98-1O14 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 163711

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    atccgatccaatccactcca 109
             ||||||||||||||||||||
Sbjct: 39504 atccgatccaatccactcca 39523
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>dbj|AK126094.1| Homo sapiens cDNA FLJ44106 fis, clone TESTI4044234
          Length = 3161

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 ggaggccatggtggaggagc 267
           ||||||||||||||||||||
Sbjct: 852 ggaggccatggtggaggagc 871
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>ref|NM_001012982.1| Homo sapiens hypothetical gene supported by BC043530 (LOC345222),
           mRNA
          Length = 3161

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 ggaggccatggtggaggagc 267
           ||||||||||||||||||||
Sbjct: 852 ggaggccatggtggaggagc 871
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>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 170988

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     atccgatccaatccactcca 109
              ||||||||||||||||||||
Sbjct: 153053 atccgatccaatccactcca 153072
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>gb|AC073880.5|AC073880 Homo sapiens BAC clone RP11-1136L22 from Y, complete sequence
          Length = 34210

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 91   tccgatccaatccactccac 110
            ||||||||||||||||||||
Sbjct: 7040 tccgatccaatccactccac 7021
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 82       tccatccaatccgatccaatccac 105
                |||||||||||| |||||||||||
Sbjct: 33460707 tccatccaatccaatccaatccac 33460730
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 82      tccatccaatccgatccaatccac 105
               |||||||||||| |||||||||||
Sbjct: 4822328 tccatccaatccaatccaatccac 4822305
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>gb|AC122686.6| Homo sapiens 12 BAC RP11-295J2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 121995

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 82    tccatccaatccgatccaatccactcca 109
             |||||||||||| |||||||||| ||||
Sbjct: 16892 tccatccaatccaatccaatccaatcca 16865
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>gb|AC116956.2| Dictyostelium discoideum chromosome 2 map 1418423-1684967 strain AX4,
             complete sequence
          Length = 266544

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 417   gatgatgaagataatagtga 436
             ||||||||||||||||||||
Sbjct: 24827 gatgatgaagataatagtga 24846
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>gb|AC119253.7| Mus musculus chromosome 15, clone RP24-279A15, complete sequence
          Length = 163503

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 259    tggaggagctcaagtgtcca 278
              ||||||||||||||||||||
Sbjct: 139282 tggaggagctcaagtgtcca 139263
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>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0710E05
          Length = 179714

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    tccatccaatccgatccaatccac 105
             |||||||||||| |||||||||||
Sbjct: 66977 tccatccaatccaatccaatccac 66954
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>gb|BC043530.1| Homo sapiens hypothetical gene supported by BC043530, mRNA (cDNA
            clone IMAGE:5168535)
          Length = 2075

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 248  ggaggccatggtggaggagc 267
            ||||||||||||||||||||
Sbjct: 1473 ggaggccatggtggaggagc 1492
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>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0054K20
          Length = 153584

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 82    tccatccaatccgatccaatccac 105
             |||||||||||| |||||||||||
Sbjct: 35582 tccatccaatccaatccaatccac 35605
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>dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1316_E06
          Length = 110197

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 82    tccatccaatccgatccaatccac 105
             |||||||||||| |||||||||||
Sbjct: 91326 tccatccaatccaatccaatccac 91349
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>dbj|AK120525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126P12, full
            insert sequence
          Length = 1880

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 82   tccatccaatccgatccaatccac 105
            |||||||||||| |||||||||||
Sbjct: 1736 tccatccaatccaatccaatccac 1713
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>emb|BX957260.10| Zebrafish DNA sequence from clone DKEY-1N7 in linkage group 19,
             complete sequence
          Length = 188873

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   ggtggaggagctcaagtgtc 276
             ||||||||||||||||||||
Sbjct: 15068 ggtggaggagctcaagtgtc 15049
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>gb|AC124627.22| Mus musculus chromosome 19, clone RP23-435K14, complete sequence
          Length = 228991

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 38     gagcaaaaggaggactaggactag 61
              ||||||||||| ||||||||||||
Sbjct: 221981 gagcaaaaggaagactaggactag 221958
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>gb|AE003540.3| Drosophila melanogaster chromosome 3L, section 45 of 83 of the
            complete sequence
          Length = 297381

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 90   atccgatccaatccactcca 109
            ||||||||||||||||||||
Sbjct: 7730 atccgatccaatccactcca 7749
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>gb|AC119183.8| Mus musculus chromosome 15, clone RP24-172H2, complete sequence
          Length = 144236

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 259  tggaggagctcaagtgtcca 278
            ||||||||||||||||||||
Sbjct: 1594 tggaggagctcaagtgtcca 1575
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>gb|AC005516.1|AC005516 Homo sapiens Chromosome 4p16.3 BAC clone 399e10 containing Huntington's
             Disease gene; exons 1-67, complete sequence
          Length = 200348

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   ggaggccatggtggaggagc 267
             ||||||||||||||||||||
Sbjct: 15828 ggaggccatggtggaggagc 15809
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>emb|Z69837.1|HSL113B6 Human DNA sequence from clone LA04NC01-113B6 on chromosome 4, complete
             sequence
          Length = 39756

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   ggaggccatggtggaggagc 267
             ||||||||||||||||||||
Sbjct: 18739 ggaggccatggtggaggagc 18720
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>emb|AL626765.22| Mouse DNA sequence from clone RP23-179N14 on chromosome 19, complete
             sequence
          Length = 206196

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 38    gagcaaaaggaggactaggactag 61
             ||||||||||| ||||||||||||
Sbjct: 69965 gagcaaaaggaagactaggactag 69988


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,448,695
Number of Sequences: 3902068
Number of extensions: 3448695
Number of successful extensions: 68573
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68375
Number of HSP's gapped (non-prelim): 198
length of query: 442
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 420
effective length of database: 17,147,199,772
effective search space: 7201823904240
effective search space used: 7201823904240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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