ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart53g04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK103758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033143F04, full insert sequence Length = 2140 Score = 149 bits (75), Expect = 9e-33 Identities = 141/163 (86%) Strand = Plus / Plus Query: 286 caggtcgcacctcgagcaggaggtgctgaggctgcaggaggtgctgcgggaggagacggc 345 ||||||||| || |||||||| ||| || ||||||| ||| ||||| |||||||||| | Sbjct: 236 caggtcgcagctggagcaggacgtgaagaagctgcagaaggcgctgcaggaggagacgac 295 Query: 346 gctgcacgccatcctcgacaacgcgctcgaccacgccgccgtcaccctcgccgacatgtc 405 |||||||||||||||||| ||||||||| ||| |||||| |||| |||||||||||||| Sbjct: 296 gctgcacgccatcctcgagaacgcgctccaccgcgccgcgctcactctcgccgacatgtc 355 Query: 406 ataccctcccacccacgcccaggagctgctctccagcatctcc 448 |||| |||||| |||| |||||||||||||||| ||||||| Sbjct: 356 ctacctccccaccaacgcacaggagctgctctccaacatctcc 398
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 101 bits (51), Expect = 2e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 316 gctgcaggaggtgctgcgggaggagacggcgctgcacgccatcctcgacaacgcgctcga 375 ||||||| ||| ||||| |||||||||| ||||||||||||||||||| ||||||||| | Sbjct: 29218257 gctgcagaaggcgctgcaggaggagacgacgctgcacgccatcctcgagaacgcgctcca 29218316 Query: 376 ccacgccgccgtcaccctcgccgacatgtcatacc 410 || |||||| |||| |||||||||||||| |||| Sbjct: 29218317 ccgcgccgcgctcactctcgccgacatgtcctacc 29218351 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 304 ggaggtgctgaggctgcaggaggtgctgcgggaggag 340 |||||||||| |||||| ||||| ||||||||||||| Sbjct: 11484557 ggaggtgctggggctgcgggaggagctgcgggaggag 11484521 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 caggagctgctctccagcatctcc 448 |||||||||||||||| ||||||| Sbjct: 29218451 caggagctgctctccaacatctcc 29218474 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 tctccttctccttgcctcct 39 |||||||||||||||||||| Sbjct: 17391490 tctccttctccttgcctcct 17391471 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tacccttctccttctccttg 33 |||||||||||||||||||| Sbjct: 17054916 tacccttctccttctccttg 17054935
>dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1215_E11 Length = 105301 Score = 101 bits (51), Expect = 2e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 316 gctgcaggaggtgctgcgggaggagacggcgctgcacgccatcctcgacaacgcgctcga 375 ||||||| ||| ||||| |||||||||| ||||||||||||||||||| ||||||||| | Sbjct: 85544 gctgcagaaggcgctgcaggaggagacgacgctgcacgccatcctcgagaacgcgctcca 85603 Query: 376 ccacgccgccgtcaccctcgccgacatgtcatacc 410 || |||||| |||| |||||||||||||| |||| Sbjct: 85604 ccgcgccgcgctcactctcgccgacatgtcctacc 85638 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 caggagctgctctccagcatctcc 448 |||||||||||||||| ||||||| Sbjct: 85738 caggagctgctctccaacatctcc 85761
>dbj|AP006054.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417E03 Length = 133019 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 304 ggaggtgctgaggctgcaggaggtgctgcgggaggag 340 |||||||||| |||||| ||||| ||||||||||||| Sbjct: 53800 ggaggtgctggggctgcgggaggagctgcgggaggag 53764
>emb|BX908775.18| Zebrafish DNA sequence from clone CH211-255L12 in linkage group 18, complete sequence Length = 82190 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 313 gaggctgcaggaggtgctgcgggaggag 340 ||||||||||| |||||||||||||||| Sbjct: 65732 gaggctgcagggggtgctgcgggaggag 65759
>emb|BX072540.8| Zebrafish DNA sequence from clone CH211-103M6 in linkage group 18, complete sequence Length = 178664 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 313 gaggctgcaggaggtgctgcgggaggag 340 ||||||||||| |||||||||||||||| Sbjct: 67305 gaggctgcagggggtgctgcgggaggag 67278
>gb|BT018822.1| Zea mays clone EL01N0532D03.d mRNA sequence Length = 1417 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 374 gaccacgccgccgtcaccctcgccgac 400 ||||||||||||||| ||||||||||| Sbjct: 751 gaccacgccgccgtcgccctcgccgac 777
>ref|XM_535539.2| PREDICTED: Canis familiaris similar to Cytochrome P450 11A1, mitochondrial precursor (CYPXIA1) (P450(scc)) (Cholesterol side-chain cleavage enzyme) (Cholesterol desmolase) (LOC478365), mRNA Length = 1806 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 318 tgcaggaggtgctgcgggaggag 340 ||||||||||||||||||||||| Sbjct: 1040 tgcaggaggtgctgcgggaggag 1062
>ref|XM_001000409.1| PREDICTED: Mus musculus RIKEN cDNA 2410127L17 gene, transcript variant 4 (2410127L17Rik), mRNA Length = 1686 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcgcgcccgcccgcccgcacgc 133 |||||||||||||||||||||| Sbjct: 229 gcgcgcccgcccgcccgcacgc 250
>ref|XM_001000423.1| PREDICTED: Mus musculus RIKEN cDNA 2410127L17 gene, transcript variant 3 (2410127L17Rik), mRNA Length = 1762 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcgcgcccgcccgcccgcacgc 133 |||||||||||||||||||||| Sbjct: 249 gcgcgcccgcccgcccgcacgc 270
>gb|AC134906.3| Mus musculus BAC clone RP23-361K7 from chromosome 19, complete sequence Length = 192484 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 gcgcgcccgcccgcccgcacgc 133 |||||||||||||||||||||| Sbjct: 78793 gcgcgcccgcccgcccgcacgc 78772
>gb|BC019559.1| Mus musculus RIKEN cDNA 2410127L17 gene, mRNA (cDNA clone IMAGE:4209381), with apparent retained intron Length = 1731 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcgcgcccgcccgcccgcacgc 133 |||||||||||||||||||||| Sbjct: 330 gcgcgcccgcccgcccgcacgc 351
>gb|AC121940.3| Mus musculus BAC clone RP24-209B21 from chromosome 19, complete sequence Length = 203390 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 gcgcgcccgcccgcccgcacgc 133 |||||||||||||||||||||| Sbjct: 167608 gcgcgcccgcccgcccgcacgc 167587
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 109 agcgcgcgcccgcccgcccgca 130 |||||||||||||||||||||| Sbjct: 4009706 agcgcgcgcccgcccgcccgca 4009685
>gb|AF521894.1|AF521896S3 Streptomyces hygroscopicus ansamycin biosynthesis gene cluster, partial sequence Length = 8901 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 367 cgcgctcgaccacgccgccgtc 388 |||||||||||||||||||||| Sbjct: 173 cgcgctcgaccacgccgccgtc 194
>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster, complete sequence Length = 123580 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 379 cgccgccgtcaccctcgccgac 400 |||||||||||||||||||||| Sbjct: 53545 cgccgccgtcaccctcgccgac 53566
>gb|AC101689.12| Mus musculus chromosome 1, clone RP23-217C21, complete sequence Length = 189241 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 20248 cataccctcccacccacgccc 20228
>ref|XM_478887.1| Oryza sativa (japonica cultivar-group), mRNA Length = 723 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 293 cacctcgagcaggaggtgctgaggctgcaggag 325 ||||||||| | ||||||||||||||| ||||| Sbjct: 415 cacctcgagaacgaggtgctgaggctgaaggag 447
>gb|AC145089.7| Mus musculus chromosome 3, clone RP23-268K12, complete sequence Length = 167657 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 41092 cataccctcccacccacgccc 41072
>gb|AF025841.1| Homo sapiens acute myeloid leukemia 1 protein (AML1) gene, exons 5 through 8 and partial cds, alternatively spliced Length = 11503 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 gcgcgcgcccgcccgcccgca 130 ||||||||||||||||||||| Sbjct: 6365 gcgcgcgcccgcccgcccgca 6345
>ref|XM_425176.1| PREDICTED: Gallus gallus similar to Toll-like receptor 2 precursor (LOC427604), mRNA Length = 2808 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 gctgcaggaggtgctgcggga 336 ||||||||||||||||||||| Sbjct: 2703 gctgcaggaggtgctgcggga 2723
>ref|XM_430148.1| PREDICTED: Gallus gallus LOC424392 (LOC424392), mRNA Length = 695 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 gctgcaggaggtgctgcgggaggag 340 ||||||||||| ||||||||||||| Sbjct: 353 gctgcaggaggagctgcgggaggag 377
>gb|AC134611.4| Mus musculus BAC clone RP23-98D8 from chromosome 15, complete sequence Length = 198894 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 49984 cataccctcccacccacgccc 49964
>gb|AY217089.1| Mus musculus neuronal transcription factor BRN3a (Pou4f1) gene, complete cds; alternatively spliced Length = 11036 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgcacgct 134 |||||||||||||||||||| |||| Sbjct: 6120 gcgcgcgcccgcccgcccgctcgct 6144
>gb|AC164080.7| Mus musculus chromosome 1, clone RP23-212E14, complete sequence Length = 205823 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 109629 cataccctcccacccacgccc 109649
>gb|AY559047.1| Oryza sativa (japonica cultivar-group) homeodomain leucine zipper protein 14 (hox14) mRNA, complete cds Length = 1173 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 293 cacctcgagcaggaggtgctgaggctgcaggag 325 ||||||||| | ||||||||||||||| ||||| Sbjct: 620 cacctcgagaacgaggtgctgaggctgaaggag 652
>gb|AC131110.3| Mus musculus BAC clone RP23-387J23 from chromosome 6, complete sequence Length = 205463 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 23209 cataccctcccacccacgccc 23189
>ref|XM_975897.1| PREDICTED: Mus musculus POU domain, class 4, transcription factor 1 (Pou4f1), mRNA Length = 932 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgcacgct 134 |||||||||||||||||||| |||| Sbjct: 283 gcgcgcgcccgcccgcccgctcgct 307
>gb|AC127377.4| Mus musculus BAC clone RP23-51N3 from chromosome 3, complete sequence Length = 195767 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 gcgcgcccgcccgcccgcacgcttc 136 |||||| |||||||||||||||||| Sbjct: 167856 gcgcgcacgcccgcccgcacgcttc 167832
>gb|AC122243.3| Mus musculus BAC clone RP23-148C10 from chromosome 17, complete sequence Length = 204584 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 agcgcgcgcccgcccgcccgc 129 ||||||||||||||||||||| Sbjct: 182597 agcgcgcgcccgcccgcccgc 182617
>ref|XM_390074.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG09898.1) partial mRNA Length = 696 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 gaggtgctgcgggaggagacggcgc 347 |||||||||||||||| |||||||| Sbjct: 395 gaggtgctgcgggaggcgacggcgc 419
>gb|AC126262.4| Mus musculus BAC clone RP23-359F12 from chromosome 12, complete sequence Length = 208710 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 gcgcgcgcccgcccgcccgca 130 ||||||||||||||||||||| Sbjct: 96523 gcgcgcgcccgcccgcccgca 96503
>gb|AC125138.4| Mus musculus BAC clone RP24-324N8 from chromosome 5, complete sequence Length = 171978 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 91707 cataccctcccacccacgccc 91727
>gb|AC121997.3| Mus musculus BAC clone RP24-312G4 from chromosome 14, complete sequence Length = 143266 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 gcgcgcgcccgcccgcccgcacgct 134 |||||||||||||||||||| |||| Sbjct: 74044 gcgcgcgcccgcccgcccgctcgct 74020
>gb|AC122525.4| Mus musculus BAC clone RP24-496O17 from chromosome 9, complete sequence Length = 196461 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 gcgcgcgcccgcccgcccgcacgct 134 |||||||||||||||||||| |||| Sbjct: 43824 gcgcgcgcccgcccgcccgctcgct 43800
>gb|BC058370.1| Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 34, mRNA (cDNA clone IMAGE:6822314), partial cds Length = 4152 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 aggtgctgaggctgcaggagg 326 ||||||||||||||||||||| Sbjct: 2840 aggtgctgaggctgcaggagg 2860
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 caacgcgctcgaccacgccgc 384 ||||||||||||||||||||| Sbjct: 8398 caacgcgctcgaccacgccgc 8418
>emb|AL691476.12| Mouse DNA sequence from clone RP23-219D8 on chromosome 11 Contains a chaperonin subunit 3 (gamma) (Cct3) pseudogene and the 3' end of a novel gene, complete sequence Length = 177256 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 67083 cataccctcccacccacgccc 67063
>gb|AE014173.1| Mus musculus piebald deletion region section 1 of 11 of the complete sequence Length = 400029 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 80652 cataccctcccacccacgccc 80672
>gb|DQ098103.1| Rhodococcus aetherivorans strain I24 putative feruloyl-CoA synthetase gene, complete cds Length = 1536 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 gccgccgtcaccctcgccgac 400 ||||||||||||||||||||| Sbjct: 1360 gccgccgtcaccctcgccgac 1380
>gb|AY057108.2| Hypocrea jecorina QM9414 transcriptional adaptor-like protein (ada2), galactose-1-phosphate uridylyltransferase (gal7), and transmembrane domain-containing protein (erg28) genes, complete cds Length = 5359 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 385 cgtcaccctcgccgacatgtc 405 ||||||||||||||||||||| Sbjct: 3722 cgtcaccctcgccgacatgtc 3742
>gb|AC074211.3| Genomic sequence for Mus musculus, clone RP23-92G8, complete sequence Length = 212134 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 138698 cataccctcccacccacgccc 138718
>dbj|AK155473.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630230M04 product:hypothetical Alanine-rich region profile containing protein, full insert sequence Length = 1146 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 gcgcgcgcccgcccgcccgca 130 ||||||||||||||||||||| Sbjct: 436 gcgcgcgcccgcccgcccgca 416
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 gctgcacgccatcctcgacaa 366 ||||||||||||||||||||| Sbjct: 3184048 gctgcacgccatcctcgacaa 3184068
>dbj|AK076217.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:4022437H04 product:hypothetical DEAD/DEAH box helicase containing protein, full insert sequence Length = 3857 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 aggtgctgaggctgcaggagg 326 ||||||||||||||||||||| Sbjct: 2479 aggtgctgaggctgcaggagg 2499
>gb|AC163028.5| Mus musculus chromosome 1, clone RP23-393I22, complete sequence Length = 206399 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 40002 cataccctcccacccacgccc 40022
>dbj|AK004733.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200013B07 product:KIAA0134 RNA HELICASE (HRH1) (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 3802 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 aggtgctgaggctgcaggagg 326 ||||||||||||||||||||| Sbjct: 2504 aggtgctgaggctgcaggagg 2524
>dbj|AK007461.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810012L18 product:hypothetical Rubredoxin containing protein, full insert sequence Length = 1540 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 aggtgctgaggctgcaggagg 326 ||||||||||||||||||||| Sbjct: 245 aggtgctgaggctgcaggagg 265
>dbj|AK036763.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930003H07 product:RIKEN cDNA 1200013B07 gene, full insert sequence Length = 2177 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 aggtgctgaggctgcaggagg 326 ||||||||||||||||||||| Sbjct: 904 aggtgctgaggctgcaggagg 924
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 agcgcgcgcccgcccgcccgc 129 ||||||||||||||||||||| Sbjct: 17317145 agcgcgcgcccgcccgcccgc 17317125 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 ctgcaggaggtgctgcgggaggag 340 |||||||||| ||||||||||||| Sbjct: 13784011 ctgcaggaggagctgcgggaggag 13783988
>dbj|AB183426.1| Mus musculus Dnaja1 gene for DnaJ (Hsp40) homolog, subfamily A, member 1, complete cds Length = 17951 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 1316 cataccctcccacccacgccc 1336
>dbj|AP000057.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 28/28, complete sequence Length = 107897 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgca 130 ||||||||||||||||||||| Sbjct: 101859 gcgcgcgcccgcccgcccgca 101879
>gb|AC157988.5| Mus musculus chromosome 3, clone RP23-149E4, complete sequence Length = 216259 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 198034 cataccctcccacccacgccc 198014
>gb|AC156630.6| Mus musculus BAC clone RP24-556B7 from chromosome 7, complete sequence Length = 205753 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 aggtgctgaggctgcaggagg 326 ||||||||||||||||||||| Sbjct: 84644 aggtgctgaggctgcaggagg 84624
>dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1045B05 Length = 140992 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 agcgcgcgcccgcccgcccgc 129 ||||||||||||||||||||| Sbjct: 104017 agcgcgcgcccgcccgcccgc 103997
>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 agcgcgcgcccgcccgcccgc 129 ||||||||||||||||||||| Sbjct: 41058 agcgcgcgcccgcccgcccgc 41038
>dbj|BS000193.1| Pan troglodytes chromosome 22 clone:PTB-117K17, map 22, partial sequences, complete sequence Length = 124920 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgca 130 ||||||||||||||||||||| Sbjct: 37957 gcgcgcgcccgcccgcccgca 37977
>gb|AE005126.1| Halobacterium sp. NRC-1 section 157 of 170 of the complete genome Length = 10575 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 366 acgcgctcgaccacgccgccg 386 ||||||||||||||||||||| Sbjct: 2825 acgcgctcgaccacgccgccg 2845
>dbj|AK129062.1| Mus musculus mRNA for mKIAA0134 protein Length = 3781 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 aggtgctgaggctgcaggagg 326 ||||||||||||||||||||| Sbjct: 2486 aggtgctgaggctgcaggagg 2506
>dbj|AK121889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105B17, full insert sequence Length = 1130 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 293 cacctcgagcaggaggtgctgaggctgcaggag 325 ||||||||| | ||||||||||||||| ||||| Sbjct: 613 cacctcgagaacgaggtgctgaggctgaaggag 645
>gb|BC080856.1| Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 34, mRNA (cDNA clone MGC:90614 IMAGE:6854931), complete cds Length = 4097 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 aggtgctgaggctgcaggagg 326 ||||||||||||||||||||| Sbjct: 2778 aggtgctgaggctgcaggagg 2798
>emb|BX547936.5| Mouse DNA sequence from clone RP23-109A11 on chromosome X, complete sequence Length = 70333 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 65774 cataccctcccacccacgccc 65794 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 5325 cataccctcccacccacgccc 5305
>gb|AC132439.4| Mus musculus BAC clone RP23-234H10 from 6, complete sequence Length = 190308 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 5101 cataccctcccacccacgccc 5121
>emb|CT025561.11| Mouse DNA sequence from clone RP23-308G10 on chromosome 9, complete sequence Length = 224154 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 31656 cataccctcccacccacgccc 31636
>dbj|AP001721.1| Homo sapiens genomic DNA, chromosome 21q, section 65/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgca 130 ||||||||||||||||||||| Sbjct: 143730 gcgcgcgcccgcccgcccgca 143750
>gb|AC113082.6| Mus musculus chromosome 9, clone RP23-291C4, complete sequence Length = 218087 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 217988 cataccctcccacccacgccc 217968
>gb|AC102601.8| Mus musculus chromosome 1, clone RP23-379D23, complete sequence Length = 181908 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 24430 cataccctcccacccacgccc 24450
>gb|AC116406.13| Mus musculus chromosome 3, clone RP23-427K12, complete sequence Length = 175075 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 90446 cataccctcccacccacgccc 90426
>emb|CT009697.13| Mouse DNA sequence from clone RP23-131H5 on chromosome 13, complete sequence Length = 225802 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 97957 cataccctcccacccacgccc 97937
>gb|AC165360.3| Mus musculus BAC clone RP23-110L20 from chromosome 17, complete sequence Length = 217732 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 agcgcgcgcccgcccgcccgc 129 ||||||||||||||||||||| Sbjct: 135675 agcgcgcgcccgcccgcccgc 135655
>ref|NM_027883.2| Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 34 (Dhx34), mRNA Length = 4097 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 aggtgctgaggctgcaggagg 326 ||||||||||||||||||||| Sbjct: 2778 aggtgctgaggctgcaggagg 2798
>emb|AL833775.7| Mouse DNA sequence from clone RP23-135L5 on chromosome 4, complete sequence Length = 194640 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 29474 cataccctcccacccacgccc 29494
>dbj|AP000331.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:PQ122C7/499A22, complete sequence Length = 64326 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgca 130 ||||||||||||||||||||| Sbjct: 58450 gcgcgcgcccgcccgcccgca 58470
>dbj|AP000172.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone B2344F14-f50E8, segment 8/9, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgca 130 ||||||||||||||||||||| Sbjct: 92489 gcgcgcgcccgcccgcccgca 92509
>emb|AL646049.14| Mouse DNA sequence from clone RP23-63A9 on chromosome X, complete sequence Length = 146105 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 cataccctcccacccacgccc 425 ||||||||||||||||||||| Sbjct: 90748 cataccctcccacccacgccc 90728
>ref|XM_475200.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1131 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 acgccgccgtcaccctcgcc 397 |||||||||||||||||||| Sbjct: 1028 acgccgccgtcaccctcgcc 1047
>ref|XM_467016.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1635 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 ggcgctgcacgccatcctcg 362 |||||||||||||||||||| Sbjct: 84 ggcgctgcacgccatcctcg 103
>gb|AC104706.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_F05, complete sequence Length = 119573 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 acgcgctcgaccacgccgcc 385 |||||||||||||||||||| Sbjct: 40314 acgcgctcgaccacgccgcc 40333 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 acgcgctcgaccacgccgcc 385 |||||||||||||||||||| Sbjct: 39427 acgcgctcgaccacgccgcc 39446
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cgccgccgtcaccctcgccg 398 |||||||||||||||||||| Sbjct: 1932992 cgccgccgtcaccctcgccg 1933011
>gb|AC004503.1| Homo sapiens chromosome 5, P1 clone 1354A7 (LBNL H47), complete sequence Length = 76007 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 304 ggaggtgctgaggctgcaggaggtgctg 331 ||||||||||||| ||| |||||||||| Sbjct: 10423 ggaggtgctgagggtgctggaggtgctg 10450
>gb|AY632765.1| Mycobacterium avium possible membrane protein (MA0048) gene, complete cds Length = 885 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 ccatcctcgacaacgcgctc 373 |||||||||||||||||||| Sbjct: 98 ccatcctcgacaacgcgctc 117
>gb|AC139562.8| Mus musculus chromosome 5, clone RP24-180G11, complete sequence Length = 168158 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 32264 gcgcgcgcccgcccgcccgc 32283
>gb|BC056466.1| Mus musculus RAB35, member RAS oncogene family, mRNA (cDNA clone MGC:67236 IMAGE:5717246), complete cds Length = 2181 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 127 gcgcgcgcccgcccgcccgc 146
>gb|AC111733.5| Rattus norvegicus 13 BAC CH230-170L19 (Children's Hospital Oakland Research Institute) complete sequence Length = 138366 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 315 ggctgcaggaggtgctgcgggagg 338 |||||||||||||||||| ||||| Sbjct: 15271 ggctgcaggaggtgctgcaggagg 15248
>ref|XM_418942.1| PREDICTED: Gallus gallus similar to TBC1 domain family, member 7 (LOC420853), mRNA Length = 1208 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 ggctgcaggaggtgctgcgg 334 |||||||||||||||||||| Sbjct: 8 ggctgcaggaggtgctgcgg 27
>ref|XM_418693.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 4930579E17 (LOC420591), mRNA Length = 1598 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 ctagcgcgcgcccgcccgcc 126 |||||||||||||||||||| Sbjct: 478 ctagcgcgcgcccgcccgcc 459
>gb|AC137150.11| Mus musculus chromosome 18, clone RP23-342A15, complete sequence Length = 213513 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 166721 gcgcgcgcccgcccgcccgc 166740
>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21, complete sequence Length = 151267 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 acgccgccgtcaccctcgcc 397 |||||||||||||||||||| Sbjct: 111792 acgccgccgtcaccctcgcc 111811
>gb|AY575211.1| Oryctolagus cuniculus dickkopf1 (Dkk1) mRNA, complete cds Length = 1329 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 caagcacaggaggaagggct 284 |||||||||||||||||||| Sbjct: 811 caagcacaggaggaagggct 830
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tctacccttctccttctcct 31 |||||||||||||||||||| Sbjct: 5209571 tctacccttctccttctcct 5209590 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tctacccttctccttctcct 31 |||||||||||||||||||| Sbjct: 3457240 tctacccttctccttctcct 3457221
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 agcgcgcgcccgcccgcccg 128 |||||||||||||||||||| Sbjct: 5561107 agcgcgcgcccgcccgcccg 5561088
>gb|AC159999.6| Mus musculus BAC clone RP23-6P9 from chromosome 10, complete sequence Length = 216489 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 gagcaggaggtgctgaggct 318 |||||||||||||||||||| Sbjct: 62844 gagcaggaggtgctgaggct 62863
>ref|XM_984550.1| PREDICTED: Mus musculus hypothetical protein LOC666551 (LOC666551), mRNA Length = 1071 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 933 gcgcgcgcccgcccgcccgc 952
>ref|XM_543654.2| PREDICTED: Canis familiaris similar to keratin, hair, basic, 5 (LOC486528), mRNA Length = 1483 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 ggaggtgctgcgggaggagacggc 345 |||||||||| ||||||||||||| Sbjct: 711 ggaggtgctgagggaggagacggc 734
>emb|CT009719.10| Mouse DNA sequence from clone RP23-65P17 on chromosome 17, complete sequence Length = 205369 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 124102 gcgcgcgcccgcccgcccgc 124083
>ref|XM_860961.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 4 (LOC481590), mRNA Length = 3361 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 263 gcgcgcgcccgcccgcccgc 282
>gb|AC112254.6| Homo sapiens BAC clone RP11-1156I21 from 4, complete sequence Length = 91840 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 aggtgctgaggctgcaggag 325 |||||||||||||||||||| Sbjct: 89709 aggtgctgaggctgcaggag 89690
>ref|XM_862186.1| PREDICTED: Canis familiaris similar to LIM domain only 4 (predicted), transcript variant 2 (LOC479962), mRNA Length = 1946 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 cgcgcgcccgcccgcccgcacgct 134 ||||||||||||||||||| |||| Sbjct: 108 cgcgcgcccgcccgcccgctcgct 85
>ref|XM_537086.2| PREDICTED: Canis familiaris similar to LIM domain only 4 (predicted), transcript variant 1 (LOC479962), mRNA Length = 2210 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 cgcgcgcccgcccgcccgcacgct 134 ||||||||||||||||||| |||| Sbjct: 312 cgcgcgcccgcccgcccgctcgct 289
>emb|AL589987.25| Human DNA sequence from clone RP11-364B14 on chromosome X Contains a novel gene, a heterogeneous nuclear ribonucleoprotein A3 (HNRPA3) pseudogene, a novel pseudogene and a CpG island, complete sequence Length = 143770 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cgcgcgcccgcccgcccgca 130 |||||||||||||||||||| Sbjct: 111894 cgcgcgcccgcccgcccgca 111913
>gb|AC091091.2| Gallus gallus clone WAG-93J15, complete sequence Length = 136822 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 gagcaggaggtgctgaggct 318 |||||||||||||||||||| Sbjct: 120768 gagcaggaggtgctgaggct 120749
>gb|AY055810.1| Vanessa atalanta ABC membrane transporter (white) gene, partial cds Length = 1332 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 tcgacaacgcgctcgaccacgccg 383 |||||| ||||||||||||||||| Sbjct: 540 tcgacaccgcgctcgaccacgccg 517
>gb|AC159539.6| Mus musculus chromosome 5, clone RP23-228F6, complete sequence Length = 238599 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 195825 gcgcgcgcccgcccgcccgc 195844
>gb|AC051649.21| Homo sapiens chromosome 11, clone RP11-534I22, complete sequence Length = 188519 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 cttctccttctccttgcctccttc 41 ||||||||||||||| |||||||| Sbjct: 124382 cttctccttctccttccctccttc 124405
>gb|DQ097838.1| Phanerochaete chrysosporium RP-78 Ty1/copia LTR retrotransposon PCretro6, complete sequence Length = 5049 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 4705 gcgcgcgcccgcccgcccgc 4686 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 97 gcgcgcgcccgcccgcccgc 78
>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0040M05, from chromosome 3, complete sequence Length = 153126 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 agcgcgcgcccgcccgcccg 128 |||||||||||||||||||| Sbjct: 104639 agcgcgcgcccgcccgcccg 104620
>ref|NM_001004293.1| Mus musculus adhesion molecule with Ig like domain 1 (Amigo1), mRNA Length = 5016 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 21 gcgcgcgcccgcccgcccgc 2
>ref|NM_146137.2| Mus musculus adhesion molecule with Ig like domain 1 (Amigo1), mRNA Length = 5051 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 21 gcgcgcgcccgcccgcccgc 2
>gb|AC087530.8| Homo sapiens chromosome 17, clone RP11-313F15, complete sequence Length = 170507 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 ccttctccttctccttgcctcctt 40 |||||||||||||||| ||||||| Sbjct: 156321 ccttctccttctccttccctcctt 156298
>dbj|AB230209.1| Aspergillus oryzae cDNA, contig sequence: AoEST7097 Length = 452 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ggtgctgaggctgcaggagg 326 |||||||||||||||||||| Sbjct: 330 ggtgctgaggctgcaggagg 311
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ggtgctgaggctgcaggagg 326 |||||||||||||||||||| Sbjct: 645636 ggtgctgaggctgcaggagg 645655
>gb|AC110792.3| Homo sapiens BAC clone RP11-571I18 from 4, complete sequence Length = 170202 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 133272 gcgcgcgcccgcccgcccgc 133253
>dbj|AK156576.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830031E13 product:Ras-related protein Rab-35 (Rab-1C) (GTP-binding protein RAY) homolog [Homo sapiens], full insert sequence Length = 2153 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 118 gcgcgcgcccgcccgcccgc 137
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cgccatcctcgacaacgcgctcga 375 ||||| |||||||||||||||||| Sbjct: 3395763 cgccagcctcgacaacgcgctcga 3395740
>emb|BX537118.12| Zebrafish DNA sequence from clone CH211-202N8, complete sequence Length = 197161 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 cgcccgcccgcccgcacgct 134 |||||||||||||||||||| Sbjct: 69270 cgcccgcccgcccgcacgct 69289
>gb|AC133012.5| Homo sapiens chromosome 17, clone RP11-582A10, complete sequence Length = 153014 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 ccttctccttctccttgcctcctt 40 |||||||||||||||| ||||||| Sbjct: 15870 ccttctccttctccttccctcctt 15893
>gb|AC008655.7| Homo sapiens chromosome 19 clone CTB-191K22, complete sequence Length = 123149 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 gaggtgctgaggctgcaggaggtg 328 ||||||||| |||||||||||||| Sbjct: 11663 gaggtgctgcggctgcaggaggtg 11686
>dbj|AK052308.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330025A21 product:hypothetical protein, full insert sequence Length = 1179 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 458 gcgcgcgcccgcccgcccgc 439
>gb|BC051234.1| Mus musculus, clone IMAGE:5257278, mRNA Length = 894 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 gagcaggaggtgctgaggct 318 |||||||||||||||||||| Sbjct: 72 gagcaggaggtgctgaggct 53
>gb|AC092247.1|AC092247 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR36B06, complete sequence Length = 183436 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 cccgcccgcccgcacgcttc 136 |||||||||||||||||||| Sbjct: 80297 cccgcccgcccgcacgcttc 80278
>gb|AC000353.27| Homo sapiens Chromosome 11q13 BAC Clone 18h3, complete sequence Length = 233089 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 142733 gcgcgcgcccgcccgcccgc 142752
>gb|AC160410.3| Mus musculus 10 BAC RP24-356L3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172562 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 46184 gcgcgcgcccgcccgcccgc 46203
>gb|AC153906.4| Mus musculus 10 BAC RP23-191C14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209293 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 71128 gcgcgcgcccgcccgcccgc 71109
>emb|BX934094.2| Gallus gallus finished cDNA, clone ChEST59m21 Length = 1226 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 ggctgcaggaggtgctgcgg 334 |||||||||||||||||||| Sbjct: 67 ggctgcaggaggtgctgcgg 86
>emb|BX932558.2| Gallus gallus finished cDNA, clone ChEST624b22 Length = 1071 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ggaggtgctgcgggaggaga 341 |||||||||||||||||||| Sbjct: 335 ggaggtgctgcgggaggaga 354
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 acgccgccgtcaccctcgcc 397 |||||||||||||||||||| Sbjct: 19189894 acgccgccgtcaccctcgcc 19189913 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 acgcgctcgaccacgccgcc 385 |||||||||||||||||||| Sbjct: 15849540 acgcgctcgaccacgccgcc 15849521 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 acgcgctcgaccacgccgcc 385 |||||||||||||||||||| Sbjct: 15848653 acgcgctcgaccacgccgcc 15848634
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 agcgcgcgcccgcccgcccg 128 |||||||||||||||||||| Sbjct: 5560322 agcgcgcgcccgcccgcccg 5560303
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 ggcgctgcacgccatcctcg 362 |||||||||||||||||||| Sbjct: 25935101 ggcgctgcacgccatcctcg 25935082 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 12720140 gcgcgcgcccgcccgcccgc 12720159
>gb|AC141931.2| Homo sapiens fosmid clone XXFOS-8923B4 from 4, complete sequence Length = 40181 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 aggtgctgaggctgcaggag 325 |||||||||||||||||||| Sbjct: 29120 aggtgctgaggctgcaggag 29101
>dbj|AP006506.1| Mus musculus genomic DNA, chromosome 4, clone: RP23-284M8, complete sequence Length = 255195 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 215414 gcgcgcgcccgcccgcccgc 215395
>dbj|AK173118.1| Mus musculus mRNA for mKIAA1163 protein Length = 5028 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 21 gcgcgcgcccgcccgcccgc 2
>gb|AC079304.6| Homo sapiens BAC clone RP11-389K20 from 2, complete sequence Length = 188132 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 12 tctacccttctccttctccttgcctccttcac 43 ||||||||||||||| |||||||||||||| Sbjct: 61590 tctacccttctccttaaacttgcctccttcac 61559
>gb|AC109327.10| Homo sapiens chromosome 17, clone RP11-93C20, complete sequence Length = 113000 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 ccttctccttctccttgcctcctt 40 |||||||||||||||| ||||||| Sbjct: 1440 ccttctccttctccttccctcctt 1417
>emb|BX935730.1| Gallus gallus finished cDNA, clone ChEST322g15 Length = 1135 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 ggctgcaggaggtgctgcgg 334 |||||||||||||||||||| Sbjct: 5 ggctgcaggaggtgctgcgg 24
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ccgccgtcaccctcgccgac 400 |||||||||||||||||||| Sbjct: 1410216 ccgccgtcaccctcgccgac 1410235
>gb|AC091620.3| Papio anubis clone RP41-400H11, complete sequence Length = 119638 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cttctccttctccttgcctc 37 |||||||||||||||||||| Sbjct: 90525 cttctccttctccttgcctc 90544
>gb|AC155293.3| Mus musculus BAC clone RP24-427L24 from chromosome 12, complete sequence Length = 156472 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 acccttctccttctccttgc 34 |||||||||||||||||||| Sbjct: 6425 acccttctccttctccttgc 6406
>gb|AC133638.7| Homo sapiens chromosome 17, clone CTD-2125J20, complete sequence Length = 139560 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 ccttctccttctccttgcctcctt 40 |||||||||||||||| ||||||| Sbjct: 49128 ccttctccttctccttccctcctt 49151
>gb|AC103719.12| Homo sapiens chromosome 8, clone RP11-421P23, complete sequence Length = 167878 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 cccttctccttctccttgcc 35 |||||||||||||||||||| Sbjct: 133078 cccttctccttctccttgcc 133097
>gb|AC105928.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0014O06, complete sequence Length = 168031 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 agcgcgcgcccgcccgcccg 128 |||||||||||||||||||| Sbjct: 24806 agcgcgcgcccgcccgcccg 24787
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tctacccttctccttctcct 31 |||||||||||||||||||| Sbjct: 5842686 tctacccttctccttctcct 5842705 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tctacccttctccttctcct 31 |||||||||||||||||||| Sbjct: 2869758 tctacccttctccttctcct 2869777
>dbj|AP005967.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1089G05 Length = 161420 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tacccttctccttctccttg 33 |||||||||||||||||||| Sbjct: 55768 tacccttctccttctccttg 55787
>dbj|AP004684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012H03 Length = 163377 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 tctccttctccttgcctcct 39 |||||||||||||||||||| Sbjct: 22531 tctccttctccttgcctcct 22512
>dbj|AP003620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H06 Length = 142832 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 tctccttctccttgcctcct 39 |||||||||||||||||||| Sbjct: 128083 tctccttctccttgcctcct 128064
>dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0086N11 Length = 146185 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 68417 gcgcgcgcccgcccgcccgc 68436
>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1655_B12 Length = 132736 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 ctgcaggaggtgctgcgggaggag 340 |||||||||| ||||||||||||| Sbjct: 33495 ctgcaggaggagctgcgggaggag 33472
>dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1282_H11 Length = 143314 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 ggcgctgcacgccatcctcg 362 |||||||||||||||||||| Sbjct: 86442 ggcgctgcacgccatcctcg 86423
>gb|AF162783.1|AF162783 Mus musculus Pmca1 gene, promoter region Length = 975 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 676 gcgcgcgcccgcccgcccgc 695
>gb|AC002428.1|AC002428 Human BAC clone GS1-39E22 from 5q31, complete sequence Length = 143875 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 304 ggaggtgctgaggctgcaggaggtgctg 331 ||||||||||||| ||| |||||||||| Sbjct: 29411 ggaggtgctgagggtgctggaggtgctg 29384
>emb|AJ326175.1|HSA326175 Homo sapiens genomic sequence surrounding NotI site, clone NL1-CL12C Length = 669 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 agcgcgcgcccgcccgcccg 128 |||||||||||||||||||| Sbjct: 91 agcgcgcgcccgcccgcccg 72
>dbj|AK072554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128I09, full insert sequence Length = 2050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tctccttctccttgcctcct 39 |||||||||||||||||||| Sbjct: 34 tctccttctccttgcctcct 53
>dbj|AK068695.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160G01, full insert sequence Length = 3151 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 108 gcgcgcgcccgcccgcccgc 127
>gb|AC114542.9| Mus musculus chromosome 9, clone RP23-111F9, complete sequence Length = 235924 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 gcgcccgcccgcccgcacgc 133 |||||||||||||||||||| Sbjct: 99166 gcgcccgcccgcccgcacgc 99185
>gb|AC153902.4| Mus musculus 6 BAC RP23-5K15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208717 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 ataccctcccacccacgccc 425 |||||||||||||||||||| Sbjct: 202819 ataccctcccacccacgccc 202838
>emb|CT571245.12| Mouse DNA sequence from clone RP23-2N7 on chromosome 12, complete sequence Length = 198268 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 acccttctccttctccttgc 34 |||||||||||||||||||| Sbjct: 10837 acccttctccttctccttgc 10856
>gb|AE003647.3| Drosophila melanogaster chromosome 2L, section 56 of 83 of the complete sequence Length = 261949 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 cccgcccgcccgcacgcttc 136 |||||||||||||||||||| Sbjct: 12931 cccgcccgcccgcacgcttc 12912
>dbj|AP006462.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-813O18, complete sequence Length = 98815 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 cttctccttctccttgcctccttc 41 ||||||||||||||| |||||||| Sbjct: 68204 cttctccttctccttccctccttc 68181
>gb|AC154019.3| Mus musculus 6 BAC RP24-374A6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 169229 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 ataccctcccacccacgccc 425 |||||||||||||||||||| Sbjct: 26330 ataccctcccacccacgccc 26349
>dbj|AP000944.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-867O8, complete sequence Length = 219246 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 95648 gcgcgcgcccgcccgcccgc 95667
>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence Length = 230278 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 gcgcgcgcccgcccgcccgcacgc 133 ||||||||||||||||||| |||| Sbjct: 92652 gcgcgcgcccgcccgcccgtacgc 92629
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ccatcctcgacaacgcgctc 373 |||||||||||||||||||| Sbjct: 69026 ccatcctcgacaacgcgctc 69007
>emb|AL807774.10| Mouse DNA sequence from clone RP23-198L2 on chromosome 4, complete sequence Length = 67374 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 44049 gcgcgcgcccgcccgcccgc 44068
>emb|AL607145.28| Mouse DNA sequence from clone RP23-230I5 on chromosome 4, complete sequence Length = 147896 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 98355 gcgcgcgcccgcccgcccgc 98374
>emb|CT025653.7| Mouse DNA sequence from clone RP23-62D21 on chromosome 9, complete sequence Length = 256470 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 gcgcccgcccgcccgcacgc 133 |||||||||||||||||||| Sbjct: 168031 gcgcccgcccgcccgcacgc 168050
>ref|NM_198163.1| Mus musculus RAB35, member RAS oncogene family (Rab35), mRNA Length = 2181 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 127 gcgcgcgcccgcccgcccgc 146
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 ctgcaggaggtgctgcggga 336 |||||||||||||||||||| Sbjct: 926218 ctgcaggaggtgctgcggga 926237
>emb|AL671854.14| Mouse DNA sequence from clone RP23-89M15 on chromosome 3, complete sequence Length = 207265 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gcgcgcgcccgcccgcccgc 129 |||||||||||||||||||| Sbjct: 129731 gcgcgcgcccgcccgcccgc 129712 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,315,766 Number of Sequences: 3902068 Number of extensions: 3315766 Number of successful extensions: 138939 Number of sequences better than 10.0: 167 Number of HSP's better than 10.0 without gapping: 173 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 137440 Number of HSP's gapped (non-prelim): 1498 length of query: 449 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 427 effective length of database: 17,147,199,772 effective search space: 7321854302644 effective search space used: 7321854302644 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
