ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart53g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_473019.1| Oryza sativa (japonica cultivar-group), predic... 149 9e-33
2ref|XM_473018.1| Oryza sativa (japonica cultivar-group), predic... 149 9e-33
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 149 9e-33
4dbj|AK073892.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 9e-33
5dbj|AK072539.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 9e-33
6dbj|AK063925.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 9e-33
7emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4,... 149 9e-33
8ref|XM_473020.1| Oryza sativa (japonica cultivar-group), predic... 145 1e-31
9ref|XM_473015.1| Oryza sativa (japonica cultivar-group), predic... 82 2e-12
10dbj|AK110895.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
11ref|NM_192744.1| Oryza sativa (japonica cultivar-group), predic... 80 7e-12
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
13dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
14dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
15dbj|AK105921.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 7e-12
16dbj|AK100501.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 7e-12
17dbj|AK072500.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 7e-12
18dbj|AK060682.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 7e-12
19ref|XM_473021.1| Oryza sativa (japonica cultivar-group), predic... 60 6e-06
20emb|CT737399.2| Pan troglodytes chromosome X clone CH251-213G08 ... 42 1.5
21gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 42 1.5
22emb|AL034384.1|HSMTM0 Human chromosome Xq28, cosmid clones 7H3, ... 42 1.5
23ref|XM_880667.1| PREDICTED: Bos taurus DNA (cytosine-5-)-methylt... 40 5.8
24ref|XM_867643.1| PREDICTED: Bos taurus DNA (cytosine-5-)-methylt... 40 5.8
25ref|XM_540110.2| PREDICTED: Canis familiaris similar to DNA cyto... 40 5.8
26dbj|AP003516.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
27dbj|AK107309.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
28dbj|AK070057.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
29emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 5.8

>ref|XM_473019.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1116

 Score =  149 bits (75), Expect = 9e-33
 Identities = 120/135 (88%)
 Strand = Plus / Plus

                                                                       
Query: 238 acgcgataccgaactgggagctctccgggttcgtggagtacatcgagtcgggccacacgc 297
           ||||||||||| | |||||| |||||||||||||||||||||||| ||||||||| | ||
Sbjct: 155 acgcgataccgcagtgggagatctccgggttcgtggagtacatcgggtcgggccagatgc 214

                                                                       
Query: 298 aggaagacatgatcctgccggttccggtgggcgcgaacgccgtgcggctgggcaacgacg 357
           |||  |||||| |||||||||| |||| ||||||| |||||||||||||||||||||| |
Sbjct: 215 agggtgacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgagg 274

                          
Query: 358 ccaccatccggcagc 372
           || |||||| |||||
Sbjct: 275 cctccatccagcagc 289



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>ref|XM_473018.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1122

 Score =  149 bits (75), Expect = 9e-33
 Identities = 120/135 (88%)
 Strand = Plus / Plus

                                                                       
Query: 238 acgcgataccgaactgggagctctccgggttcgtggagtacatcgagtcgggccacacgc 297
           ||||||||||  | |||||| |||||||||||||||||||||||| ||||||||| | ||
Sbjct: 161 acgcgatacctcagtgggagatctccgggttcgtggagtacatcgggtcgggccagaagc 220

                                                                       
Query: 298 aggaagacatgatcctgccggttccggtgggcgcgaacgccgtgcggctgggcaacgacg 357
           ||| ||||||| |||||||||| |||| ||||||| |||||||||||||||||||||| |
Sbjct: 221 agggagacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgagg 280

                          
Query: 358 ccaccatccggcagc 372
           || |||||| |||||
Sbjct: 281 cctccatccagcagc 295



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  149 bits (75), Expect = 9e-33
 Identities = 120/135 (88%)
 Strand = Plus / Plus

                                                                            
Query: 238      acgcgataccgaactgggagctctccgggttcgtggagtacatcgagtcgggccacacgc 297
                ||||||||||| | |||||| |||||||||||||||||||||||| ||||||||| | ||
Sbjct: 24720382 acgcgataccgcagtgggagatctccgggttcgtggagtacatcgggtcgggccagatgc 24720441

                                                                            
Query: 298      aggaagacatgatcctgccggttccggtgggcgcgaacgccgtgcggctgggcaacgacg 357
                |||  |||||| |||||||||| |||| ||||||| |||||||||||||||||||||| |
Sbjct: 24720442 agggtgacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgagg 24720501

                               
Query: 358      ccaccatccggcagc 372
                || |||||| |||||
Sbjct: 24720502 cctccatccagcagc 24720516



 Score =  149 bits (75), Expect = 9e-33
 Identities = 120/135 (88%)
 Strand = Plus / Plus

                                                                            
Query: 238      acgcgataccgaactgggagctctccgggttcgtggagtacatcgagtcgggccacacgc 297
                ||||||||||  | |||||| |||||||||||||||||||||||| ||||||||| | ||
Sbjct: 24716666 acgcgatacctcagtgggagatctccgggttcgtggagtacatcgggtcgggccagaagc 24716725

                                                                            
Query: 298      aggaagacatgatcctgccggttccggtgggcgcgaacgccgtgcggctgggcaacgacg 357
                ||| ||||||| |||||||||| |||| ||||||| |||||||||||||||||||||| |
Sbjct: 24716726 agggagacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgagg 24716785

                               
Query: 358      ccaccatccggcagc 372
                || |||||| |||||
Sbjct: 24716786 cctccatccagcagc 24716800



 Score =  145 bits (73), Expect = 1e-31
 Identities = 154/181 (85%)
 Strand = Plus / Plus

                                                                            
Query: 191      cgggccagacaagtctcagatgaatggcccggtggtgacggggaagcacgcgataccgaa 250
                |||||| |||||||| ||| |||| ||| |||||||||||||     |||| |||| |||
Sbjct: 24722540 cgggccggacaagtcccagctgaacggcacggtggtgacgggtcgatacgccatactgaa 24722599

                                                                            
Query: 251      ctgggagctctccgggttcgtggagtacatcgagtcgggccacacgcaggaagacatgat 310
                ||||||| |||| ||||||||||||||||||||||| || |||| | || | ||||||||
Sbjct: 24722600 ctgggagatctcggggttcgtggagtacatcgagtccgggcacagggagcaggacatgat 24722659

                                                                            
Query: 311      cctgccggttccggtgggcgcgaacgccgtgcggctgggcaacgacgccaccatccggca 370
                |||| |||| |||| |||||||  |||||||||  |||||||||||||||||||||||||
Sbjct: 24722660 cctggcggtgccggagggcgcgcgcgccgtgcgattgggcaacgacgccaccatccggca 24722719

                 
Query: 371      g 371
                |
Sbjct: 24722720 g 24722720



 Score =  135 bits (68), Expect = 1e-28
 Identities = 113/128 (88%)
 Strand = Plus / Plus

                                                                            
Query: 245      accgaactgggagctctccgggttcgtggagtacatcgagtcgggccacacgcaggaaga 304
                ||||||||||||| |||| ||||||||||||||||||| ||| || |||| | || | ||
Sbjct: 24727242 accgaactgggagatctctgggttcgtggagtacatcgggtccgggcacaaggagcagga 24727301

                                                                            
Query: 305      catgatcctgccggttccggtgggcgcgaacgccgtgcggctgggcaacgacgccaccat 364
                |||||||||| |||| |||| ||||||| |||||||||| |||||||||||||| |||||
Sbjct: 24727302 catgatcctggcggtgccggagggcgcgtacgccgtgcgcctgggcaacgacgcaaccat 24727361

                        
Query: 365      ccggcagc 372
                ||||||||
Sbjct: 24727362 ccggcagc 24727369



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 113/137 (82%)
 Strand = Plus / Plus

                                                                            
Query: 238      acgcgataccgaactgggagctctccgggttcgtggagtacatcgagtcgggccacacgc 297
                ||||||| ||| ||||| || || ||||||||||||||||||||  ||| || || | ||
Sbjct: 24702640 acgcgatcccgtactggaagatcaccgggttcgtggagtacatctcgtccgggcagaagc 24702699

                                                                            
Query: 298      aggaagacatgatcctgccggttccggtgggcgcgaacgccgtgcggctgggcaacgacg 357
                |||  |||||| | ||| |||| || | ||||||| |||||||||||||||||||||| |
Sbjct: 24702700 agggcgacatgctgctgacggtgccagagggcgcgcacgccgtgcggctgggcaacgagg 24702759

                                 
Query: 358      ccaccatccggcagcag 374
                || |||||  |||||||
Sbjct: 24702760 cctccatcgagcagcag 24702776



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>dbj|AK073892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076M24, full
           insert sequence
          Length = 1599

 Score =  149 bits (75), Expect = 9e-33
 Identities = 120/135 (88%)
 Strand = Plus / Plus

                                                                       
Query: 238 acgcgataccgaactgggagctctccgggttcgtggagtacatcgagtcgggccacacgc 297
           ||||||||||| | |||||| |||||||||||||||||||||||| ||||||||| | ||
Sbjct: 276 acgcgataccgcagtgggagatctccgggttcgtggagtacatcgggtcgggccagatgc 335

                                                                       
Query: 298 aggaagacatgatcctgccggttccggtgggcgcgaacgccgtgcggctgggcaacgacg 357
           |||  |||||| |||||||||| |||| ||||||| |||||||||||||||||||||| |
Sbjct: 336 agggtgacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgagg 395

                          
Query: 358 ccaccatccggcagc 372
           || |||||| |||||
Sbjct: 396 cctccatccagcagc 410



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>dbj|AK072539.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133J23, full
           insert sequence
          Length = 1588

 Score =  149 bits (75), Expect = 9e-33
 Identities = 120/135 (88%)
 Strand = Plus / Plus

                                                                       
Query: 238 acgcgataccgaactgggagctctccgggttcgtggagtacatcgagtcgggccacacgc 297
           ||||||||||  | |||||| |||||||||||||||||||||||| ||||||||| | ||
Sbjct: 565 acgcgatacctcagtgggagatctccgggttcgtggagtacatcgggtcgggccagaagc 624

                                                                       
Query: 298 aggaagacatgatcctgccggttccggtgggcgcgaacgccgtgcggctgggcaacgacg 357
           ||| ||||||| |||||||||| |||| ||||||| |||||||||||||||||||||| |
Sbjct: 625 agggagacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgagg 684

                          
Query: 358 ccaccatccggcagc 372
           || |||||| |||||
Sbjct: 685 cctccatccagcagc 699



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>dbj|AK063925.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-C04, full
           insert sequence
          Length = 1517

 Score =  149 bits (75), Expect = 9e-33
 Identities = 120/135 (88%)
 Strand = Plus / Plus

                                                                       
Query: 238 acgcgataccgaactgggagctctccgggttcgtggagtacatcgagtcgggccacacgc 297
           ||||||||||  | |||||| |||||||||||||||||||||||| ||||||||| | ||
Sbjct: 274 acgcgatacctcagtgggagatctccgggttcgtggagtacatcgggtcgggccagaagc 333

                                                                       
Query: 298 aggaagacatgatcctgccggttccggtgggcgcgaacgccgtgcggctgggcaacgacg 357
           ||| ||||||| |||||||||| |||| ||||||| |||||||||||||||||||||| |
Sbjct: 334 agggagacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgagg 393

                          
Query: 358 ccaccatccggcagc 372
           || |||||| |||||
Sbjct: 394 cctccatccagcagc 408



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>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11,
              complete sequence
          Length = 133856

 Score =  149 bits (75), Expect = 9e-33
 Identities = 120/135 (88%)
 Strand = Plus / Plus

                                                                          
Query: 238    acgcgataccgaactgggagctctccgggttcgtggagtacatcgagtcgggccacacgc 297
              ||||||||||| | |||||| |||||||||||||||||||||||| ||||||||| | ||
Sbjct: 109905 acgcgataccgcagtgggagatctccgggttcgtggagtacatcgggtcgggccagatgc 109964

                                                                          
Query: 298    aggaagacatgatcctgccggttccggtgggcgcgaacgccgtgcggctgggcaacgacg 357
              |||  |||||| |||||||||| |||| ||||||| |||||||||||||||||||||| |
Sbjct: 109965 agggtgacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgagg 110024

                             
Query: 358    ccaccatccggcagc 372
              || |||||| |||||
Sbjct: 110025 cctccatccagcagc 110039



 Score =  149 bits (75), Expect = 9e-33
 Identities = 120/135 (88%)
 Strand = Plus / Plus

                                                                          
Query: 238    acgcgataccgaactgggagctctccgggttcgtggagtacatcgagtcgggccacacgc 297
              ||||||||||  | |||||| |||||||||||||||||||||||| ||||||||| | ||
Sbjct: 106189 acgcgatacctcagtgggagatctccgggttcgtggagtacatcgggtcgggccagaagc 106248

                                                                          
Query: 298    aggaagacatgatcctgccggttccggtgggcgcgaacgccgtgcggctgggcaacgacg 357
              ||| ||||||| |||||||||| |||| ||||||| |||||||||||||||||||||| |
Sbjct: 106249 agggagacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgagg 106308

                             
Query: 358    ccaccatccggcagc 372
              || |||||| |||||
Sbjct: 106309 cctccatccagcagc 106323



 Score =  145 bits (73), Expect = 1e-31
 Identities = 154/181 (85%)
 Strand = Plus / Plus

                                                                          
Query: 191    cgggccagacaagtctcagatgaatggcccggtggtgacggggaagcacgcgataccgaa 250
              |||||| |||||||| ||| |||| ||| |||||||||||||     |||| |||| |||
Sbjct: 112063 cgggccggacaagtcccagctgaacggcacggtggtgacgggtcgatacgccatactgaa 112122

                                                                          
Query: 251    ctgggagctctccgggttcgtggagtacatcgagtcgggccacacgcaggaagacatgat 310
              ||||||| |||| ||||||||||||||||||||||| || |||| | || | ||||||||
Sbjct: 112123 ctgggagatctcggggttcgtggagtacatcgagtccgggcacagggagcaggacatgat 112182

                                                                          
Query: 311    cctgccggttccggtgggcgcgaacgccgtgcggctgggcaacgacgccaccatccggca 370
              |||| |||| |||| |||||||  |||||||||  |||||||||||||||||||||||||
Sbjct: 112183 cctggcggtgccggagggcgcgcgcgccgtgcgattgggcaacgacgccaccatccggca 112242

               
Query: 371    g 371
              |
Sbjct: 112243 g 112243



 Score =  135 bits (68), Expect = 1e-28
 Identities = 113/128 (88%)
 Strand = Plus / Plus

                                                                          
Query: 245    accgaactgggagctctccgggttcgtggagtacatcgagtcgggccacacgcaggaaga 304
              ||||||||||||| |||| ||||||||||||||||||| ||| || |||| | || | ||
Sbjct: 116765 accgaactgggagatctctgggttcgtggagtacatcgggtccgggcacaaggagcagga 116824

                                                                          
Query: 305    catgatcctgccggttccggtgggcgcgaacgccgtgcggctgggcaacgacgccaccat 364
              |||||||||| |||| |||| ||||||| |||||||||| |||||||||||||| |||||
Sbjct: 116825 catgatcctggcggtgccggagggcgcgtacgccgtgcgcctgggcaacgacgcaaccat 116884

                      
Query: 365    ccggcagc 372
              ||||||||
Sbjct: 116885 ccggcagc 116892



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 113/137 (82%)
 Strand = Plus / Plus

                                                                         
Query: 238   acgcgataccgaactgggagctctccgggttcgtggagtacatcgagtcgggccacacgc 297
             ||||||| ||| ||||| || || ||||||||||||||||||||  ||| || || | ||
Sbjct: 92163 acgcgatcccgtactggaagatcaccgggttcgtggagtacatctcgtccgggcagaagc 92222

                                                                         
Query: 298   aggaagacatgatcctgccggttccggtgggcgcgaacgccgtgcggctgggcaacgacg 357
             |||  |||||| | ||| |||| || | ||||||| |||||||||||||||||||||| |
Sbjct: 92223 agggcgacatgctgctgacggtgccagagggcgcgcacgccgtgcggctgggcaacgagg 92282

                              
Query: 358   ccaccatccggcagcag 374
             || |||||  |||||||
Sbjct: 92283 cctccatcgagcagcag 92299



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>ref|XM_473020.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1119

 Score =  145 bits (73), Expect = 1e-31
 Identities = 154/181 (85%)
 Strand = Plus / Plus

                                                                       
Query: 191 cgggccagacaagtctcagatgaatggcccggtggtgacggggaagcacgcgataccgaa 250
           |||||| |||||||| ||| |||| ||| |||||||||||||     |||| |||| |||
Sbjct: 114 cgggccggacaagtcccagctgaacggcacggtggtgacgggtcgatacgccatactgaa 173

                                                                       
Query: 251 ctgggagctctccgggttcgtggagtacatcgagtcgggccacacgcaggaagacatgat 310
           ||||||| |||| ||||||||||||||||||||||| || |||| | || | ||||||||
Sbjct: 174 ctgggagatctcggggttcgtggagtacatcgagtccgggcacagggagcaggacatgat 233

                                                                       
Query: 311 cctgccggttccggtgggcgcgaacgccgtgcggctgggcaacgacgccaccatccggca 370
           |||| |||| |||| |||||||  |||||||||  |||||||||||||||||||||||||
Sbjct: 234 cctggcggtgccggagggcgcgcgcgccgtgcgattgggcaacgacgccaccatccggca 293

            
Query: 371 g 371
           |
Sbjct: 294 g 294



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>ref|XM_473015.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1134

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 113/137 (82%)
 Strand = Plus / Plus

                                                                       
Query: 238 acgcgataccgaactgggagctctccgggttcgtggagtacatcgagtcgggccacacgc 297
           ||||||| ||| ||||| || || ||||||||||||||||||||  ||| || || | ||
Sbjct: 152 acgcgatcccgtactggaagatcaccgggttcgtggagtacatctcgtccgggcagaagc 211

                                                                       
Query: 298 aggaagacatgatcctgccggttccggtgggcgcgaacgccgtgcggctgggcaacgacg 357
           |||  |||||| | ||| |||| || | ||||||| |||||||||||||||||||||| |
Sbjct: 212 agggcgacatgctgctgacggtgccagagggcgcgcacgccgtgcggctgggcaacgagg 271

                            
Query: 358 ccaccatccggcagcag 374
           || |||||  |||||||
Sbjct: 272 cctccatcgagcagcag 288



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>dbj|AK110895.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-A05, full
           insert sequence
          Length = 1499

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 113/137 (82%)
 Strand = Plus / Plus

                                                                       
Query: 238 acgcgataccgaactgggagctctccgggttcgtggagtacatcgagtcgggccacacgc 297
           ||||||| ||| ||||| || || ||||||||||||||||||||  ||| || || | ||
Sbjct: 283 acgcgatcccgtactggaagatcaccgggttcgtggagtacatctcgtccgggcagaagc 342

                                                                       
Query: 298 aggaagacatgatcctgccggttccggtgggcgcgaacgccgtgcggctgggcaacgacg 357
           |||  |||||| | ||| |||| || | ||||||| |||||||||||||||||||||| |
Sbjct: 343 agggcgacatgctgctgacggtgccagagggcgcgcacgccgtgcggctgggcaacgagg 402

                            
Query: 358 ccaccatccggcagcag 374
           || |||||  |||||||
Sbjct: 403 cctccatcgagcagcag 419



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>ref|NM_192744.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1122

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 94/112 (83%)
 Strand = Plus / Plus

                                                                       
Query: 261 tccgggttcgtggagtacatcgagtcgggccacacgcaggaagacatgatcctgccggtt 320
           |||||||||||||||||||||||||| || |||| |||||  |||||| | |||  ||| 
Sbjct: 178 tccgggttcgtggagtacatcgagtccgggcacaagcagggggacatgctgctggtggtg 237

                                                               
Query: 321 ccggtgggcgcgaacgccgtgcggctgggcaacgacgccaccatccggcagc 372
           |||  ||||||| |||||||||| || |||||||| ||  ||||||||||||
Sbjct: 238 ccgcagggcgcgcacgccgtgcgcctcggcaacgaggcgtccatccggcagc 289



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 94/112 (83%)
 Strand = Plus / Plus

                                                                            
Query: 261      tccgggttcgtggagtacatcgagtcgggccacacgcaggaagacatgatcctgccggtt 320
                |||||||||||||||||||||||||| || |||| |||||  |||||| | |||  ||| 
Sbjct: 24178697 tccgggttcgtggagtacatcgagtccgggcacaagcagggggacatgctgctggtggtg 24178756

                                                                    
Query: 321      ccggtgggcgcgaacgccgtgcggctgggcaacgacgccaccatccggcagc 372
                |||  ||||||| |||||||||| || |||||||| ||  ||||||||||||
Sbjct: 24178757 ccgcagggcgcgcacgccgtgcgcctcggcaacgaggcgtccatccggcagc 24178808



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 148      ccgtcatcgacgatggcctg 167
                ||||||||||||||||||||
Sbjct: 19873294 ccgtcatcgacgatggcctg 19873313



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>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0410E03
          Length = 164839

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 94/112 (83%)
 Strand = Plus / Plus

                                                                          
Query: 261    tccgggttcgtggagtacatcgagtcgggccacacgcaggaagacatgatcctgccggtt 320
              |||||||||||||||||||||||||| || |||| |||||  |||||| | |||  ||| 
Sbjct: 154519 tccgggttcgtggagtacatcgagtccgggcacaagcagggggacatgctgctggtggtg 154578

                                                                  
Query: 321    ccggtgggcgcgaacgccgtgcggctgggcaacgacgccaccatccggcagc 372
              |||  ||||||| |||||||||| || |||||||| ||  ||||||||||||
Sbjct: 154579 ccgcagggcgcgcacgccgtgcgcctcggcaacgaggcgtccatccggcagc 154630



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>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0046B10
          Length = 142596

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 94/112 (83%)
 Strand = Plus / Plus

                                                                        
Query: 261  tccgggttcgtggagtacatcgagtcgggccacacgcaggaagacatgatcctgccggtt 320
            |||||||||||||||||||||||||| || |||| |||||  |||||| | |||  ||| 
Sbjct: 3261 tccgggttcgtggagtacatcgagtccgggcacaagcagggggacatgctgctggtggtg 3320

                                                                
Query: 321  ccggtgggcgcgaacgccgtgcggctgggcaacgacgccaccatccggcagc 372
            |||  ||||||| |||||||||| || |||||||| ||  ||||||||||||
Sbjct: 3321 ccgcagggcgcgcacgccgtgcgcctcggcaacgaggcgtccatccggcagc 3372



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>dbj|AK105921.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-A04, full
           insert sequence
          Length = 1474

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 94/112 (83%)
 Strand = Plus / Plus

                                                                       
Query: 261 tccgggttcgtggagtacatcgagtcgggccacacgcaggaagacatgatcctgccggtt 320
           |||||||||||||||||||||||||| || |||| |||||  |||||| | |||  ||| 
Sbjct: 166 tccgggttcgtggagtacatcgagtccgggcacaagcagggggacatgctgctggtggtg 225

                                                               
Query: 321 ccggtgggcgcgaacgccgtgcggctgggcaacgacgccaccatccggcagc 372
           |||  ||||||| |||||||||| || |||||||| ||  ||||||||||||
Sbjct: 226 ccgcagggcgcgcacgccgtgcgcctcggcaacgaggcgtccatccggcagc 277



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>dbj|AK100501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099J05, full
           insert sequence
          Length = 3062

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 94/112 (83%)
 Strand = Plus / Plus

                                                                       
Query: 261 tccgggttcgtggagtacatcgagtcgggccacacgcaggaagacatgatcctgccggtt 320
           |||||||||||||||||||||||||| || |||| |||||  |||||| | |||  ||| 
Sbjct: 295 tccgggttcgtggagtacatcgagtccgggcacaagcagggggacatgctgctggtggtg 354

                                                               
Query: 321 ccggtgggcgcgaacgccgtgcggctgggcaacgacgccaccatccggcagc 372
           |||  ||||||| |||||||||| || |||||||| ||  ||||||||||||
Sbjct: 355 ccgcagggcgcgcacgccgtgcgcctcggcaacgaggcgtccatccggcagc 406



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>dbj|AK072500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127H12, full
           insert sequence
          Length = 1690

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 94/112 (83%)
 Strand = Plus / Plus

                                                                       
Query: 261 tccgggttcgtggagtacatcgagtcgggccacacgcaggaagacatgatcctgccggtt 320
           |||||||||||||||||||||||||| || |||| |||||  |||||| | |||  ||| 
Sbjct: 295 tccgggttcgtggagtacatcgagtccgggcacaagcagggggacatgctgctggtggtg 354

                                                               
Query: 321 ccggtgggcgcgaacgccgtgcggctgggcaacgacgccaccatccggcagc 372
           |||  ||||||| |||||||||| || |||||||| ||  ||||||||||||
Sbjct: 355 ccgcagggcgcgcacgccgtgcgcctcggcaacgaggcgtccatccggcagc 406



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>dbj|AK060682.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-E10, full
           insert sequence
          Length = 1597

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 94/112 (83%)
 Strand = Plus / Plus

                                                                       
Query: 261 tccgggttcgtggagtacatcgagtcgggccacacgcaggaagacatgatcctgccggtt 320
           |||||||||||||||||||||||||| || |||| |||||  |||||| | |||  ||| 
Sbjct: 291 tccgggttcgtggagtacatcgagtccgggcacaagcagggggacatgctgctggtggtg 350

                                                               
Query: 321 ccggtgggcgcgaacgccgtgcggctgggcaacgacgccaccatccggcagc 372
           |||  ||||||| |||||||||| || |||||||| ||  ||||||||||||
Sbjct: 351 ccgcagggcgcgcacgccgtgcgcctcggcaacgaggcgtccatccggcagc 402



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>ref|XM_473021.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 207

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 245 accgaactgggagctctccgggttcgtggagtacatcg 282
           ||||||||||||| |||| |||||||||||||||||||
Sbjct: 143 accgaactgggagatctctgggttcgtggagtacatcg 180



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>emb|CT737399.2| Pan troglodytes chromosome X clone CH251-213G08 map Xq28, complete
              sequence
          Length = 144757

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 11     ccgtagcttcgagtaaagctc 31
              |||||||||||||||||||||
Sbjct: 126486 ccgtagcttcgagtaaagctc 126466



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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 312     ctgccggttccggtgggcgcg 332
               |||||||||||||||||||||
Sbjct: 5881381 ctgccggttccggtgggcgcg 5881361



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>emb|AL034384.1|HSMTM0 Human chromosome Xq28, cosmid clones 7H3, 14D7, C1230, 11E7, F1096,
             A12197, 12G8, A09100; complete sequence bases 1..217657
          Length = 217657

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 11    ccgtagcttcgagtaaagctc 31
             |||||||||||||||||||||
Sbjct: 39915 ccgtagcttcgagtaaagctc 39895



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>ref|XM_880667.1| PREDICTED: Bos taurus DNA (cytosine-5-)-methyltransferase 3 alpha,
           transcript variant 4 (DNMT3A), mRNA
          Length = 2681

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 ctgttacccaacggggactt 184
           ||||||||||||||||||||
Sbjct: 182 ctgttacccaacggggactt 201



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>ref|XM_867643.1| PREDICTED: Bos taurus DNA (cytosine-5-)-methyltransferase 3 alpha,
           transcript variant 2 (DNMT3A), mRNA
          Length = 3065

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 ctgttacccaacggggactt 184
           ||||||||||||||||||||
Sbjct: 375 ctgttacccaacggggactt 394



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>ref|XM_540110.2| PREDICTED: Canis familiaris similar to DNA cytosine
           methyltransferase 3 alpha isoform a (LOC482996), mRNA
          Length = 3822

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 ctgttacccaacggggactt 184
           ||||||||||||||||||||
Sbjct: 430 ctgttacccaacggggactt 449



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>dbj|AP003516.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0047D12
          Length = 145981

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   ccgtcatcgacgatggcctg 167
             ||||||||||||||||||||
Sbjct: 96252 ccgtcatcgacgatggcctg 96271



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>dbj|AK107309.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-D05, full
            insert sequence
          Length = 1675

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  tggagtacatcgagtcgggc 290
            ||||||||||||||||||||
Sbjct: 1133 tggagtacatcgagtcgggc 1152



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>dbj|AK070057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041K22, full
            insert sequence
          Length = 3467

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 148  ccgtcatcgacgatggcctg 167
            ||||||||||||||||||||
Sbjct: 1110 ccgtcatcgacgatggcctg 1129



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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 335     cgccgtgcggctgggcaacgacgccacc 362
               |||||||||||||||| ||| |||||||
Sbjct: 1169352 cgccgtgcggctgggcgacgtcgccacc 1169379


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,378,109
Number of Sequences: 3902068
Number of extensions: 2378109
Number of successful extensions: 41979
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41832
Number of HSP's gapped (non-prelim): 140
length of query: 433
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 411
effective length of database: 17,147,199,772
effective search space: 7047499106292
effective search space used: 7047499106292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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