ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart53f08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106084.1| Zea mays PCO072275 mRNA sequence Length = 1307 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 244 acgctctccgccaactccaccgacggcagcaacccgctgtccccggtctccttc 297 ||||| ||||||||| ||||||||||| |||||||||| ||||||||||||| Sbjct: 305 acgctatccgccaacgccaccgacggccagaacccgctgttcccggtctccttc 358 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 329 ccggcgccgtcggcgtggcggggctcgcgcgctcc 363 |||||||||||||||| ||||||||||||| |||| Sbjct: 405 ccggcgccgtcggcgtcgcggggctcgcgccctcc 439
>ref|NM_190071.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1275 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 329 ccggcgccgtcggcgtggcggggctcgcgcgctccag 365 |||||||||||||||| || |||||||||||| |||| Sbjct: 506 ccggcgccgtcggcgtcgccgggctcgcgcgcaccag 542 Score = 40.1 bits (20), Expect = 5.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 260 ccaccgacggcagcaacccgctgtccccggtctccttcgccgcc 303 |||||||||||| |||||||| | |||||| || ||||||||| Sbjct: 419 ccaccgacggcaagaacccgctctacccggtgtcgttcgccgcc 462
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Minus Query: 329 ccggcgccgtcggcgtggcggggctcgcgcgctccag 365 |||||||||||||||| || |||||||||||| |||| Sbjct: 41132483 ccggcgccgtcggcgtcgccgggctcgcgcgcaccag 41132447 Score = 46.1 bits (23), Expect = 0.084 Identities = 50/59 (84%) Strand = Plus / Minus Query: 260 ccaccgacggcagcaacccgctgtccccggtctccttcgccgccaccgccacctgcgcg 318 ||||| |||||||||||||||| | ||||||| ||||| | ||| |||| |||||||| Sbjct: 41126918 ccaccaacggcagcaacccgctctacccggtcaccttcccggccgtcgcctcctgcgcg 41126860 Score = 40.1 bits (20), Expect = 5.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 260 ccaccgacggcagcaacccgctgtccccggtctccttcgccgcc 303 |||||||||||| |||||||| | |||||| || ||||||||| Sbjct: 41132570 ccaccgacggcaagaacccgctctacccggtgtcgttcgccgcc 41132527
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504E02 Length = 137468 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Minus Query: 329 ccggcgccgtcggcgtggcggggctcgcgcgctccag 365 |||||||||||||||| || |||||||||||| |||| Sbjct: 29538 ccggcgccgtcggcgtcgccgggctcgcgcgcaccag 29502 Score = 46.1 bits (23), Expect = 0.084 Identities = 50/59 (84%) Strand = Plus / Minus Query: 260 ccaccgacggcagcaacccgctgtccccggtctccttcgccgccaccgccacctgcgcg 318 ||||| |||||||||||||||| | ||||||| ||||| | ||| |||| |||||||| Sbjct: 23973 ccaccaacggcagcaacccgctctacccggtcaccttcccggccgtcgcctcctgcgcg 23915 Score = 40.1 bits (20), Expect = 5.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 260 ccaccgacggcagcaacccgctgtccccggtctccttcgccgcc 303 |||||||||||| |||||||| | |||||| || ||||||||| Sbjct: 29625 ccaccgacggcaagaacccgctctacccggtgtcgttcgccgcc 29582
>ref|XM_520144.1| PREDICTED: Pan troglodytes similar to coronin, actin binding protein, 2A; coronin, actin-binding protein, 2A; coronin 2A; coronin-like protein B; WD protein IR10; WD-repeat protein 2 (LOC464607), mRNA Length = 1501 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 297 cgccgccaccgccacctgcgcggc 320 |||||||||||||||||||||||| Sbjct: 25 cgccgccaccgccacctgcgcggc 48
>ref|NM_052820.2| Homo sapiens coronin, actin binding protein, 2A (CORO2A), transcript variant 2, mRNA Length = 2265 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 297 cgccgccaccgccacctgcgcggc 320 |||||||||||||||||||||||| Sbjct: 49 cgccgccaccgccacctgcgcggc 72
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 344 tggcggggctcgcgcgctccagcg 367 |||||||||||||||||||||||| Sbjct: 2800071 tggcggggctcgcgcgctccagcg 2800094
>emb|AL137073.13| Human DNA sequence from clone RP11-404F11 on chromosome 9p23-24.1 Contains a novel gene encoding a protein similar to bacterial N-acetylneuraminic acid condensing enzyme (NEUB) and 3' end of the TBCID2 gene, a TRIM14 gene encoding tripartite motif-containing 14 (KIAA0129), the CORO2A gene encoding Coronin 2A (actin-binding protein), TBC1D2 gene encoding TBC1 domain family, member 2 (PARIS1, PARIS-1,DKFZP761D1823, DKFZp761D1823), and 4 CpG islands, complete sequence Length = 201300 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Minus Query: 297 cgccgccaccgccacctgcgcggc 320 |||||||||||||||||||||||| Sbjct: 171764 cgccgccaccgccacctgcgcggc 171741
>gb|BC011690.2| Homo sapiens coronin, actin binding protein, 2A, transcript variant 2, mRNA (cDNA clone MGC:19551 IMAGE:3350035), complete cds Length = 2265 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 297 cgccgccaccgccacctgcgcggc 320 |||||||||||||||||||||||| Sbjct: 49 cgccgccaccgccacctgcgcggc 72
>dbj|AB209809.1| Homo sapiens mRNA for coronin, actin binding protein, 2A variant protein Length = 1679 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 297 cgccgccaccgccacctgcgcggc 320 |||||||||||||||||||||||| Sbjct: 54 cgccgccaccgccacctgcgcggc 77
>ref|NM_190069.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1269 Score = 46.1 bits (23), Expect = 0.084 Identities = 50/59 (84%) Strand = Plus / Plus Query: 260 ccaccgacggcagcaacccgctgtccccggtctccttcgccgccaccgccacctgcgcg 318 ||||| |||||||||||||||| | ||||||| ||||| | ||| |||| |||||||| Sbjct: 425 ccaccaacggcagcaacccgctctacccggtcaccttcccggccgtcgcctcctgcgcg 483
>dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-C07, full insert sequence Length = 1405 Score = 46.1 bits (23), Expect = 0.084 Identities = 50/59 (84%) Strand = Plus / Plus Query: 260 ccaccgacggcagcaacccgctgtccccggtctccttcgccgccaccgccacctgcgcg 318 ||||| |||||||||||||||| | ||||||| ||||| | ||| |||| |||||||| Sbjct: 346 ccaccaacggcagcaacccgctctacccggtcaccttcccggccgtcgcctcctgcgcg 404
>ref|NM_001038220.1| Bos taurus coronin, actin binding protein, 2A (CORO2A), mRNA Length = 4559 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 ccgccaccgccacctgcgcggc 320 |||||||||||||||||||||| Sbjct: 57 ccgccaccgccacctgcgcggc 78
>gb|BC109477.1| Bos taurus cDNA clone MGC:128280 IMAGE:7929071, complete cds Length = 4559 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 ccgccaccgccacctgcgcggc 320 |||||||||||||||||||||| Sbjct: 57 ccgccaccgccacctgcgcggc 78
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 332 gcgccgtcggcgtggcggggctcgc 356 |||||||| |||||||||||||||| Sbjct: 1933796 gcgccgtcagcgtggcggggctcgc 1933820
>gb|AY552779.1| Gracilaria lemaneiformis inter-simple sequence repeat marker sequence Length = 2539 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 cgctctccgccaactccaccg 265 ||||||||||||||||||||| Sbjct: 1083 cgctctccgccaactccaccg 1063
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 294 cttcgccgccaccgccacctgcgcg 318 |||||||||||||||||||| |||| Sbjct: 52207 cttcgccgccaccgccaccttcgcg 52231
>emb|CR377993.1| Pinus pinaster SSR, clone PPB1A08 Length = 228 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 291 ctccttcgccgccaccgccacctgc 315 |||||||||||||||| |||||||| Sbjct: 116 ctccttcgccgccacctccacctgc 92
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gtcggcgtggcggggctcgcg 357 ||||||||||||||||||||| Sbjct: 3650194 gtcggcgtggcggggctcgcg 3650174
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 cgccgccaccgccacctgcgc 317 ||||||||||||||||||||| Sbjct: 2975367 cgccgccaccgccacctgcgc 2975347
>ref|NM_197501.1| Oryza sativa (japonica cultivar-group) putative transposon protein (OSJNBb0038A07.22), mRNA Length = 2508 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 ccttcgccgccaccgccacc 312 |||||||||||||||||||| Sbjct: 149 ccttcgccgccaccgccacc 130
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 gcggcggcaccctccggcgc 335 |||||||||||||||||||| Sbjct: 2434742 gcggcggcaccctccggcgc 2434761
>gb|AC133931.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013M05 map C3, complete sequence Length = 131117 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcgccggctccacggcggcg 93 |||||||||||||||||||| Sbjct: 97896 tcgccggctccacggcggcg 97915
>gb|AC145320.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041K10 map near E50283S, complete sequence Length = 140651 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcgccggctccacggcggcg 93 |||||||||||||||||||| Sbjct: 4573 tcgccggctccacggcggcg 4592
>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete sequence Length = 145714 Score = 40.1 bits (20), Expect = 5.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 297 cgccgccaccgccacctgc-gcggcggc 323 ||||||||||||||||||| |||||||| Sbjct: 108108 cgccgccaccgccacctgctgcggcggc 108135
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 cgccggccatcacgacgccgtgca 223 ||||| |||||||||||||||||| Sbjct: 1298997 cgccgcccatcacgacgccgtgca 1299020
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 200 cgccggccatcacgacgccgtgca 223 ||||| |||||||||||||||||| Sbjct: 2159893 cgccgcccatcacgacgccgtgca 2159870
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 297 cgccgccaccgccacctgc-gcggcggc 323 ||||||||||||||||||| |||||||| Sbjct: 16476225 cgccgccaccgccacctgctgcggcggc 16476198
>gb|AC121314.7| Mus musculus chromosome 1, clone RP24-429M15, complete sequence Length = 175976 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 ctctggtgcttctcctgctc 75 |||||||||||||||||||| Sbjct: 95683 ctctggtgcttctcctgctc 95702
>gb|AC158521.2| Mus musculus BAC clone RP23-404M10 from chromosome 14, complete sequence Length = 205501 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ttccaacacagagacacaag 30 |||||||||||||||||||| Sbjct: 148711 ttccaacacagagacacaag 148730
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 ccaccgccacctgcgcggcg 321 |||||||||||||||||||| Sbjct: 4387612 ccaccgccacctgcgcggcg 4387593
>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete sequence Length = 132900 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 ccttcgccgccaccgccacc 312 |||||||||||||||||||| Sbjct: 46080 ccttcgccgccaccgccacc 46099
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 cgccggctccacggcggcga 94 |||||||||||||||||||| Sbjct: 309271 cgccggctccacggcggcga 309252
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 cgccggctccacggcggcga 94 |||||||||||||||||||| Sbjct: 277772 cgccggctccacggcggcga 277753
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 cgccggccatcacgacgccgtgca 223 ||||| |||||||||||||||||| Sbjct: 2214798 cgccgcccatcacgacgccgtgca 2214821
>gb|CP000135.1| Rhizobium etli CFN 42 plasmid p42b, complete sequence Length = 184338 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgcgctccagcgcctcgttc 375 |||||||||||||||||||| Sbjct: 177620 cgcgctccagcgcctcgttc 177639
>dbj|AK152490.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830076E18 product:coronin, actin binding protein 2A, full insert sequence Length = 3695 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 cgccgccaccgccacctgcgcggc 320 ||||||| |||||||||||||||| Sbjct: 69 cgccgccgccgccacctgcgcggc 92
>dbj|AK154247.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630011O17 product:coronin, actin binding protein 2A, full insert sequence Length = 1832 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 cgccgccaccgccacctgcgcggc 320 ||||||| |||||||||||||||| Sbjct: 37 cgccgccgccgccacctgcgcggc 60
>dbj|AK153134.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830124C10 product:coronin, actin binding protein 2A, full insert sequence Length = 3695 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 cgccgccaccgccacctgcgcggc 320 ||||||| |||||||||||||||| Sbjct: 69 cgccgccgccgccacctgcgcggc 92
>dbj|AK170184.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630025I05 product:coronin, actin binding protein 2A, full insert sequence Length = 3635 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 cgccgccaccgccacctgcgcggc 320 ||||||| |||||||||||||||| Sbjct: 38 cgccgccgccgccacctgcgcggc 61
>gb|AC022001.5| Homo sapiens chromosome 3 clone RP11-169K17 map 3p, complete sequence Length = 164607 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 ctctggtgcttctcctgctc 75 |||||||||||||||||||| Sbjct: 105199 ctctggtgcttctcctgctc 105218
>dbj|AK045728.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230308E04 product:Mus musculus endogenous mouse mammary tumor virus like fragment, full insert sequence Length = 4631 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 cgccgccaccgccacctgcgcggc 320 ||||||| |||||||||||||||| Sbjct: 21 cgccgccgccgccacctgcgcggc 44
>dbj|AK030971.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830472M12 product:CORONIN, ACTIN-BINDING PROTEIN, 2A (UNKNOWN) (PROTEIN FOR MGC:19551) homolog [Homo sapiens], full insert sequence Length = 3640 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 cgccgccaccgccacctgcgcggc 320 ||||||| |||||||||||||||| Sbjct: 36 cgccgccgccgccacctgcgcggc 59
>dbj|AK044060.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830085G19 product:CORONIN, ACTIN-BINDING PROTEIN, 2A (UNKNOWN) (PROTEIN FOR MGC:19551) [Homo sapiens], full insert sequence Length = 1389 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 cgccgccaccgccacctgcgcggc 320 ||||||| |||||||||||||||| Sbjct: 42 cgccgccgccgccacctgcgcggc 65
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 tctccttcgccgccaccgcc 309 |||||||||||||||||||| Sbjct: 17927332 tctccttcgccgccaccgcc 17927351
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcgccggctccacggcggcg 93 |||||||||||||||||||| Sbjct: 13513337 tcgccggctccacggcggcg 13513356
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 ccttcgccgccaccgccacc 312 |||||||||||||||||||| Sbjct: 20120411 ccttcgccgccaccgccacc 20120392
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 297 cgccgccaccgccacctgc-gcggcggc 323 ||||||||||||||||||| |||||||| Sbjct: 16469858 cgccgccaccgccacctgctgcggcggc 16469831
>gb|AC018494.6|AC018494 Homo sapiens chromosome 3 clone RP11-16M3 map 3p, complete sequence Length = 174612 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ctctggtgcttctcctgctc 75 |||||||||||||||||||| Sbjct: 127928 ctctggtgcttctcctgctc 127909
>gb|AC018811.4|AC018811 Homo sapiens chromosome 3 clone RP11-13B4 map 3p, complete sequence Length = 177834 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 ctctggtgcttctcctgctc 75 |||||||||||||||||||| Sbjct: 86852 ctctggtgcttctcctgctc 86871
>ref|XM_575819.1| PREDICTED: Rattus norvegicus coronin, actin binding protein 2A (predicted) (Coro2a_predicted), mRNA Length = 3576 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 cgccgccaccgccacctgcgcggc 320 ||||||| |||||||||||||||| Sbjct: 80 cgccgccgccgccacctgcgcggc 103
>ref|XM_310609.1| Anopheles gambiae str. PEST ENSANGP00000007426 (ENSANGG00000005607), partial mRNA Length = 2874 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ctcctgctcgccggctccac 86 |||||||||||||||||||| Sbjct: 2694 ctcctgctcgccggctccac 2675
>emb|AM183546.1| Corallococcus coralloides partial lepA gene for GTP-binding protein lepA, strain DSM 51620 Length = 915 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gagcggcgcgtccactgcgc 148 |||||||||||||||||||| Sbjct: 489 gagcggcgcgtccactgcgc 470
>emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on chromosome 4, complete sequence Length = 227816 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 cgccgccaccgccacctgcgcggc 320 ||||||| |||||||||||||||| Sbjct: 213044 cgccgccgccgccacctgcgcggc 213021
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 aactccaccgacggcagcaa 275 |||||||||||||||||||| Sbjct: 1329087 aactccaccgacggcagcaa 1329068
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 ccttcgccgccaccgccacc 312 |||||||||||||||||||| Sbjct: 20131687 ccttcgccgccaccgccacc 20131668
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcgccggctccacggcggcg 93 |||||||||||||||||||| Sbjct: 13593516 tcgccggctccacggcggcg 13593535
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 tctccttcgccgccaccgcc 309 |||||||||||||||||||| Sbjct: 17853651 tctccttcgccgccaccgcc 17853670
>emb|AL928744.3|CNS08CBH Oryza sativa chromosome 12, . BAC OSJNBa0041B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147543 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 tctccttcgccgccaccgcc 309 |||||||||||||||||||| Sbjct: 71224 tctccttcgccgccaccgcc 71205
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 ccttcgccgccaccgccacc 312 |||||||||||||||||||| Sbjct: 2360264 ccttcgccgccaccgccacc 2360283 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,391,071 Number of Sequences: 3902068 Number of extensions: 2391071 Number of successful extensions: 69294 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 67361 Number of HSP's gapped (non-prelim): 1936 length of query: 388 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 366 effective length of database: 17,147,199,772 effective search space: 6275875116552 effective search space used: 6275875116552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
