Clone Name | bart53f07 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_466265.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1187 Score = 383 bits (193), Expect = e-103 Identities = 265/289 (91%) Strand = Plus / Plus Query: 158 gcgatggaggtcggcttcttggggctgggcatcatgggtaaggcaatggcggccaacctc 217 ||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 100 gcgatggaggtggggttcctggggctgggcatcatggggaaggcaatggcggccaacctc 159 Query: 218 ctccgccacggcttccgcgtcaccgtctggaaccggaccctctccaagtgcgacgagctc 277 |||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||| Sbjct: 160 ctccgccacggcttccgcgtcaccgtctggaaccggactctctccaagtgccaggagctc 219 Query: 278 gtcgcgatgggcgccgccgtcggggacacgccggcgtccgtcgtggccaagtgcaagtac 337 |||||| ||||||||||||| ||||| ||||||||| ||||||| |||||||||| ||| Sbjct: 220 gtcgcgctgggcgccgccgtgggggagacgccggcggccgtcgtcgccaagtgcagatac 279 Query: 338 accatcgccatgctctccgatcccagcgccgcgctatctgttgttttcgacaaggatggt 397 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || Sbjct: 280 accatcgccatgctctccgaccccagcgccgcgctatctgttgtattcgacaaggacggc 339 Query: 398 gtgctcgagcaaatcggggagggcaagggctacgtggacatgtccactg 446 ||||||||||| || ||||| || ||||| || |||||||||||||||| Sbjct: 340 gtgctcgagcagattggggaagggaagggttatgtggacatgtccactg 388
>ref|XM_507487.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1712_E04.5 mRNA Length = 1235 Score = 383 bits (193), Expect = e-103 Identities = 265/289 (91%) Strand = Plus / Plus Query: 158 gcgatggaggtcggcttcttggggctgggcatcatgggtaaggcaatggcggccaacctc 217 ||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 103 gcgatggaggtggggttcctggggctgggcatcatggggaaggcaatggcggccaacctc 162 Query: 218 ctccgccacggcttccgcgtcaccgtctggaaccggaccctctccaagtgcgacgagctc 277 |||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||| Sbjct: 163 ctccgccacggcttccgcgtcaccgtctggaaccggactctctccaagtgccaggagctc 222 Query: 278 gtcgcgatgggcgccgccgtcggggacacgccggcgtccgtcgtggccaagtgcaagtac 337 |||||| ||||||||||||| ||||| ||||||||| ||||||| |||||||||| ||| Sbjct: 223 gtcgcgctgggcgccgccgtgggggagacgccggcggccgtcgtcgccaagtgcagatac 282 Query: 338 accatcgccatgctctccgatcccagcgccgcgctatctgttgttttcgacaaggatggt 397 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || Sbjct: 283 accatcgccatgctctccgaccccagcgccgcgctatctgttgtattcgacaaggacggc 342 Query: 398 gtgctcgagcaaatcggggagggcaagggctacgtggacatgtccactg 446 ||||||||||| || ||||| || ||||| || |||||||||||||||| Sbjct: 343 gtgctcgagcagattggggaagggaagggttatgtggacatgtccactg 391
>ref|XM_506829.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1712_E04.5 mRNA Length = 1267 Score = 383 bits (193), Expect = e-103 Identities = 265/289 (91%) Strand = Plus / Plus Query: 158 gcgatggaggtcggcttcttggggctgggcatcatgggtaaggcaatggcggccaacctc 217 ||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 132 gcgatggaggtggggttcctggggctgggcatcatggggaaggcaatggcggccaacctc 191 Query: 218 ctccgccacggcttccgcgtcaccgtctggaaccggaccctctccaagtgcgacgagctc 277 |||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||| Sbjct: 192 ctccgccacggcttccgcgtcaccgtctggaaccggactctctccaagtgccaggagctc 251 Query: 278 gtcgcgatgggcgccgccgtcggggacacgccggcgtccgtcgtggccaagtgcaagtac 337 |||||| ||||||||||||| ||||| ||||||||| ||||||| |||||||||| ||| Sbjct: 252 gtcgcgctgggcgccgccgtgggggagacgccggcggccgtcgtcgccaagtgcagatac 311 Query: 338 accatcgccatgctctccgatcccagcgccgcgctatctgttgttttcgacaaggatggt 397 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || Sbjct: 312 accatcgccatgctctccgaccccagcgccgcgctatctgttgtattcgacaaggacggc 371 Query: 398 gtgctcgagcaaatcggggagggcaagggctacgtggacatgtccactg 446 ||||||||||| || ||||| || ||||| || |||||||||||||||| Sbjct: 372 gtgctcgagcagattggggaagggaagggttatgtggacatgtccactg 420
>dbj|AB110167.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein, complete cds, clone: 12FPR024 Length = 1163 Score = 383 bits (193), Expect = e-103 Identities = 265/289 (91%) Strand = Plus / Plus Query: 158 gcgatggaggtcggcttcttggggctgggcatcatgggtaaggcaatggcggccaacctc 217 ||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 81 gcgatggaggtggggttcctggggctgggcatcatggggaaggcaatggcggccaacctc 140 Query: 218 ctccgccacggcttccgcgtcaccgtctggaaccggaccctctccaagtgcgacgagctc 277 |||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||| Sbjct: 141 ctccgccacggcttccgcgtcaccgtctggaaccggactctctccaagtgccaggagctc 200 Query: 278 gtcgcgatgggcgccgccgtcggggacacgccggcgtccgtcgtggccaagtgcaagtac 337 |||||| ||||||||||||| ||||| ||||||||| ||||||| |||||||||| ||| Sbjct: 201 gtcgcgctgggcgccgccgtgggggagacgccggcggccgtcgtcgccaagtgcagatac 260 Query: 338 accatcgccatgctctccgatcccagcgccgcgctatctgttgttttcgacaaggatggt 397 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || Sbjct: 261 accatcgccatgctctccgaccccagcgccgcgctatctgttgtattcgacaaggacggc 320 Query: 398 gtgctcgagcaaatcggggagggcaagggctacgtggacatgtccactg 446 ||||||||||| || ||||| || ||||| || |||||||||||||||| Sbjct: 321 gtgctcgagcagattggggaagggaagggttatgtggacatgtccactg 369
>dbj|AK109435.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-H04, full insert sequence Length = 1220 Score = 383 bits (193), Expect = e-103 Identities = 265/289 (91%) Strand = Plus / Plus Query: 158 gcgatggaggtcggcttcttggggctgggcatcatgggtaaggcaatggcggccaacctc 217 ||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 129 gcgatggaggtggggttcctggggctgggcatcatggggaaggcaatggcggccaacctc 188 Query: 218 ctccgccacggcttccgcgtcaccgtctggaaccggaccctctccaagtgcgacgagctc 277 |||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||| Sbjct: 189 ctccgccacggcttccgcgtcaccgtctggaaccggactctctccaagtgccaggagctc 248 Query: 278 gtcgcgatgggcgccgccgtcggggacacgccggcgtccgtcgtggccaagtgcaagtac 337 |||||| ||||||||||||| ||||| ||||||||| ||||||| |||||||||| ||| Sbjct: 249 gtcgcgctgggcgccgccgtgggggagacgccggcggccgtcgtcgccaagtgcagatac 308 Query: 338 accatcgccatgctctccgatcccagcgccgcgctatctgttgttttcgacaaggatggt 397 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || Sbjct: 309 accatcgccatgctctccgaccccagcgccgcgctatctgttgtattcgacaaggacggc 368 Query: 398 gtgctcgagcaaatcggggagggcaagggctacgtggacatgtccactg 446 ||||||||||| || ||||| || ||||| || |||||||||||||||| Sbjct: 369 gtgctcgagcagattggggaagggaagggttatgtggacatgtccactg 417
>dbj|AK104168.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E09, full insert sequence Length = 1187 Score = 383 bits (193), Expect = e-103 Identities = 265/289 (91%) Strand = Plus / Plus Query: 158 gcgatggaggtcggcttcttggggctgggcatcatgggtaaggcaatggcggccaacctc 217 ||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 100 gcgatggaggtggggttcctggggctgggcatcatggggaaggcaatggcggccaacctc 159 Query: 218 ctccgccacggcttccgcgtcaccgtctggaaccggaccctctccaagtgcgacgagctc 277 |||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||| Sbjct: 160 ctccgccacggcttccgcgtcaccgtctggaaccggactctctccaagtgccaggagctc 219 Query: 278 gtcgcgatgggcgccgccgtcggggacacgccggcgtccgtcgtggccaagtgcaagtac 337 |||||| ||||||||||||| ||||| ||||||||| ||||||| |||||||||| ||| Sbjct: 220 gtcgcgctgggcgccgccgtgggggagacgccggcggccgtcgtcgccaagtgcagatac 279 Query: 338 accatcgccatgctctccgatcccagcgccgcgctatctgttgttttcgacaaggatggt 397 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || Sbjct: 280 accatcgccatgctctccgaccccagcgccgcgctatctgttgtattcgacaaggacggc 339 Query: 398 gtgctcgagcaaatcggggagggcaagggctacgtggacatgtccactg 446 ||||||||||| || ||||| || ||||| || |||||||||||||||| Sbjct: 340 gtgctcgagcagattggggaagggaagggttatgtggacatgtccactg 388
>dbj|AK071800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114G06, full insert sequence Length = 1235 Score = 383 bits (193), Expect = e-103 Identities = 265/289 (91%) Strand = Plus / Plus Query: 158 gcgatggaggtcggcttcttggggctgggcatcatgggtaaggcaatggcggccaacctc 217 ||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 103 gcgatggaggtggggttcctggggctgggcatcatggggaaggcaatggcggccaacctc 162 Query: 218 ctccgccacggcttccgcgtcaccgtctggaaccggaccctctccaagtgcgacgagctc 277 |||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||| Sbjct: 163 ctccgccacggcttccgcgtcaccgtctggaaccggactctctccaagtgccaggagctc 222 Query: 278 gtcgcgatgggcgccgccgtcggggacacgccggcgtccgtcgtggccaagtgcaagtac 337 |||||| ||||||||||||| ||||| ||||||||| ||||||| |||||||||| ||| Sbjct: 223 gtcgcgctgggcgccgccgtgggggagacgccggcggccgtcgtcgccaagtgcagatac 282 Query: 338 accatcgccatgctctccgatcccagcgccgcgctatctgttgttttcgacaaggatggt 397 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || Sbjct: 283 accatcgccatgctctccgaccccagcgccgcgctatctgttgtattcgacaaggacggc 342 Query: 398 gtgctcgagcaaatcggggagggcaagggctacgtggacatgtccactg 446 ||||||||||| || ||||| || ||||| || |||||||||||||||| Sbjct: 343 gtgctcgagcagattggggaagggaagggttatgtggacatgtccactg 391
>gb|AY224558.1| Oryza sativa (japonica cultivar-group) isolate 29037 gamma hydroxybutyrate dehydrogenase-like protein mRNA, complete cds Length = 882 Score = 377 bits (190), Expect = e-101 Identities = 262/286 (91%) Strand = Plus / Plus Query: 161 atggaggtcggcttcttggggctgggcatcatgggtaaggcaatggcggccaacctcctc 220 |||||||| || ||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atggaggtggggttcctggggctgggcatcatggggaaggcaatggcggccaacctcctc 60 Query: 221 cgccacggcttccgcgtcaccgtctggaaccggaccctctccaagtgcgacgagctcgtc 280 ||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| Sbjct: 61 cgccacggcttccgcgtcaccgtctggaaccggactctctccaagtgccaggagctcgtc 120 Query: 281 gcgatgggcgccgccgtcggggacacgccggcgtccgtcgtggccaagtgcaagtacacc 340 ||| ||||||||||||| ||||| ||||||||| ||||||| |||||||||| |||||| Sbjct: 121 gcgctgggcgccgccgtgggggagacgccggcggccgtcgtcgccaagtgcagatacacc 180 Query: 341 atcgccatgctctccgatcccagcgccgcgctatctgttgttttcgacaaggatggtgtg 400 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 181 atcgccatgctctccgaccccagcgccgcgctatctgttgtattcgacaaggacggcgtg 240 Query: 401 ctcgagcaaatcggggagggcaagggctacgtggacatgtccactg 446 |||||||| || ||||| || ||||| || |||||||||||||||| Sbjct: 241 ctcgagcagattggggaagggaagggttatgtggacatgtccactg 286
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 174 bits (88), Expect = 2e-40 Identities = 103/108 (95%) Strand = Plus / Plus Query: 158 gcgatggaggtcggcttcttggggctgggcatcatgggtaaggcaatggcggccaacctc 217 ||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 21363784 gcgatggaggtggggttcctggggctgggcatcatggggaaggcaatggcggccaacctc 21363843 Query: 218 ctccgccacggcttccgcgtcaccgtctggaaccggaccctctccaag 265 |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 21363844 ctccgccacggcttccgcgtcaccgtctggaaccggactctctccaag 21363891 Score = 151 bits (76), Expect = 2e-33 Identities = 100/108 (92%) Strand = Plus / Plus Query: 272 gagctcgtcgcgatgggcgccgccgtcggggacacgccggcgtccgtcgtggccaagtgc 331 |||||||||||| ||||||||||||| ||||| ||||||||| ||||||| ||||||||| Sbjct: 21363989 gagctcgtcgcgctgggcgccgccgtgggggagacgccggcggccgtcgtcgccaagtgc 21364048 Query: 332 aagtacaccatcgccatgctctccgatcccagcgccgcgctatctgtt 379 | ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 21364049 agatacaccatcgccatgctctccgaccccagcgccgcgctatctgtt 21364096 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 377 gttgttttcgacaaggatggtgtgctcgagcaaatcggggagggcaagggctacgtggac 436 ||||| ||||||||||| || ||||||||||| || ||||| || ||||| || |||||| Sbjct: 21364185 gttgtattcgacaaggacggcgtgctcgagcagattggggaagggaagggttatgtggac 21364244 Query: 437 atgtccactg 446 |||||||||| Sbjct: 21364245 atgtccactg 21364254 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gcgggtgcgggtgcgcgtgc 46 |||||||||||||||||||| Sbjct: 27357172 gcgggtgcgggtgcgcgtgc 27357191
>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1712_E04 Length = 110098 Score = 174 bits (88), Expect = 2e-40 Identities = 103/108 (95%) Strand = Plus / Plus Query: 158 gcgatggaggtcggcttcttggggctgggcatcatgggtaaggcaatggcggccaacctc 217 ||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 23737 gcgatggaggtggggttcctggggctgggcatcatggggaaggcaatggcggccaacctc 23796 Query: 218 ctccgccacggcttccgcgtcaccgtctggaaccggaccctctccaag 265 |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 23797 ctccgccacggcttccgcgtcaccgtctggaaccggactctctccaag 23844 Score = 151 bits (76), Expect = 2e-33 Identities = 100/108 (92%) Strand = Plus / Plus Query: 272 gagctcgtcgcgatgggcgccgccgtcggggacacgccggcgtccgtcgtggccaagtgc 331 |||||||||||| ||||||||||||| ||||| ||||||||| ||||||| ||||||||| Sbjct: 23942 gagctcgtcgcgctgggcgccgccgtgggggagacgccggcggccgtcgtcgccaagtgc 24001 Query: 332 aagtacaccatcgccatgctctccgatcccagcgccgcgctatctgtt 379 | ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 24002 agatacaccatcgccatgctctccgaccccagcgccgcgctatctgtt 24049 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 377 gttgttttcgacaaggatggtgtgctcgagcaaatcggggagggcaagggctacgtggac 436 ||||| ||||||||||| || ||||||||||| || ||||| || ||||| || |||||| Sbjct: 24138 gttgtattcgacaaggacggcgtgctcgagcagattggggaagggaagggttatgtggac 24197 Query: 437 atgtccactg 446 |||||||||| Sbjct: 24198 atgtccactg 24207
>ref|NM_185404.2| Oryza sativa (japonica cultivar-group), mRNA Length = 806 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cgagctcgtcgcgatgggcgccgccg 296 |||||||||||| ||||||||||||| Sbjct: 436 cgagctcgtcgccatgggcgccgccg 461
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 gcgggtgcgggtgcgcgtgcag 48 |||||||||||||||||||||| Sbjct: 80400 gcgggtgcgggtgcgcgtgcag 80379
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 gcgggtgcgggtgcgcgtgcag 48 |||||||||||||||||||||| Sbjct: 49473 gcgggtgcgggtgcgcgtgcag 49494 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gcgggtgcgggtgcgcgtgc 46 |||||||||||||||||||| Sbjct: 12223 gcgggtgcgggtgcgcgtgc 12242
>gb|CP000135.1| Rhizobium etli CFN 42 plasmid p42b, complete sequence Length = 184338 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 220 ccgccacggcttccgcgtcacc 241 |||||||||||||||||||||| Sbjct: 91795 ccgccacggcttccgcgtcacc 91774
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cgagctcgtcgcgatgggcgccgccg 296 |||||||||||| ||||||||||||| Sbjct: 696854 cgagctcgtcgccatgggcgccgccg 696879 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gcgggtgcgggtgcgcgtgc 46 |||||||||||||||||||| Sbjct: 9450778 gcgggtgcgggtgcgcgtgc 9450797
>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC clone:P0029D06 Length = 150120 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cgagctcgtcgcgatgggcgccgccg 296 |||||||||||| ||||||||||||| Sbjct: 103282 cgagctcgtcgccatgggcgccgccg 103307
>dbj|AK106920.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-B04, full insert sequence Length = 810 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cgagctcgtcgcgatgggcgccgccg 296 |||||||||||| ||||||||||||| Sbjct: 436 cgagctcgtcgccatgggcgccgccg 461
>gb|AF004408.1|AF004408 Rhizobium etli plasmid b ThiC (thiC), putative amino acid oxidase flavoprotein (thiO), ThiG (thiG) and thiamin phosphate pyrophosphorylase (thiE) genes, complete cds Length = 5334 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 220 ccgccacggcttccgcgtcacc 241 |||||||||||||||||||||| Sbjct: 2547 ccgccacggcttccgcgtcacc 2568
>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07, complete sequence Length = 146712 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 gcagcagcagggagagggagg 155 ||||||||||||||||||||| Sbjct: 93065 gcagcagcagggagagggagg 93045
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 gaggccgcgatggaggtcggc 172 ||||||||||||||||||||| Sbjct: 2690010 gaggccgcgatggaggtcggc 2690030
>emb|CR707620.2|CNS0G8Y8 Tetraodon nigroviridis full-length cDNA Length = 891 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 agacgaagaagagtagcagcagcag 144 ||||||||||||| ||||||||||| Sbjct: 15 agacgaagaagaggagcagcagcag 39
>emb|CR706658.2|CNS0G87I Tetraodon nigroviridis full-length cDNA Length = 891 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 agacgaagaagagtagcagcagcag 144 ||||||||||||| ||||||||||| Sbjct: 15 agacgaagaagaggagcagcagcag 39
>emb|CR662208.2|CNS0F9XI Tetraodon nigroviridis full-length cDNA Length = 884 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 agacgaagaagagtagcagcagcag 144 ||||||||||||| ||||||||||| Sbjct: 15 agacgaagaagaggagcagcagcag 39
>emb|AL391361.18| Human DNA sequence from clone RP11-235G24 on chromosome 6 Contains a novel gene, a pseudogene similar to lipoproteins (contains kringle domains), a novel gene and part of a novel gene, complete sequence Length = 99162 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 gaagagtagcagcagcaggga 147 ||||||||||||||||||||| Sbjct: 66196 gaagagtagcagcagcaggga 66176
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 cccgccgccacggcttccgcg 111 ||||||||||||||||||||| Sbjct: 4757410 cccgccgccacggcttccgcg 4757430
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 gcagcagcagggagagggagg 155 ||||||||||||||||||||| Sbjct: 25230224 gcagcagcagggagagggagg 25230204
>gb|DQ229208.1| Phytophthora ramorum elicitin-like protein RAL2E gene, complete cds Length = 483 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 268 cgacgagctcgtcgcgatgggcgcc 292 |||||||||||||||| |||||||| Sbjct: 411 cgacgagctcgtcgcggtgggcgcc 387
>gb|AY308816.1| Canis familiaris homeobox D8 gene, partial sequence Length = 361 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gcgggtgcgggtgcgcgtgc 46 |||||||||||||||||||| Sbjct: 64 gcgggtgcgggtgcgcgtgc 45
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 tcaccgtctggaaccggacc 256 |||||||||||||||||||| Sbjct: 3506841 tcaccgtctggaaccggacc 3506860
>ref|NM_115199.2| Arabidopsis thaliana nucleotide binding AT3G53390 mRNA, complete cds Length = 2252 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gaagacgaagaagagtagca 137 |||||||||||||||||||| Sbjct: 221 gaagacgaagaagagtagca 240
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cgcgtcaccgtctggaaccg 252 |||||||||||||||||||| Sbjct: 324010 cgcgtcaccgtctggaaccg 323991
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 ggctacgtggacatgtccac 444 |||||||||||||||||||| Sbjct: 3395989 ggctacgtggacatgtccac 3396008
>gb|BC079869.1| Mus musculus cDNA clone IMAGE:6822296 Length = 3340 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ggcgggtgcgggtgcgcgtg 45 |||||||||||||||||||| Sbjct: 1098 ggcgggtgcgggtgcgcgtg 1079
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 cgtcgcgatgggcgccgccg 296 |||||||||||||||||||| Sbjct: 2447435 cgtcgcgatgggcgccgccg 2447416
>ref|XM_865675.1| PREDICTED: Bos taurus similar to Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4), transcript variant 1 (LOC613955), mRNA Length = 1425 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gcgggtgcgggtgcgcgtgc 46 |||||||||||||||||||| Sbjct: 190 gcgggtgcgggtgcgcgtgc 171
>ref|NM_008900.1| Mus musculus POU domain, class 3, transcription factor 3 (Pou3f3), mRNA Length = 1488 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ggcgggtgcgggtgcgcgtg 45 |||||||||||||||||||| Sbjct: 839 ggcgggtgcgggtgcgcgtg 820
>gb|AY190953.1| Drosophila virilis clone DVIF01_19_E15 (D1419) genomic sequence Length = 43320 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 aagaagagtagcagcagcag 144 |||||||||||||||||||| Sbjct: 16400 aagaagagtagcagcagcag 16381
>ref|XM_994637.1| PREDICTED: Mus musculus homeo box D8 (Hoxd8), mRNA Length = 1991 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gcgggtgcgggtgcgcgtgc 46 |||||||||||||||||||| Sbjct: 211 gcgggtgcgggtgcgcgtgc 192
>ref|XM_355338.4| PREDICTED: Mus musculus homeo box D8 (Hoxd8), mRNA Length = 1991 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gcgggtgcgggtgcgcgtgc 46 |||||||||||||||||||| Sbjct: 211 gcgggtgcgggtgcgcgtgc 192
>ref|XM_912169.2| PREDICTED: Mus musculus homeo box D8 (Hoxd8), mRNA Length = 1991 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gcgggtgcgggtgcgcgtgc 46 |||||||||||||||||||| Sbjct: 211 gcgggtgcgggtgcgcgtgc 192
>gb|BT011172.1| Drosophila melanogaster RH38069 full insert cDNA Length = 8160 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ggcgggtgcgggtgcgcgtg 45 |||||||||||||||||||| Sbjct: 3021 ggcgggtgcgggtgcgcgtg 3002
>ref|XM_847707.1| PREDICTED: Canis familiaris similar to forkhead box D2 (LOC610256), mRNA Length = 921 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gcgggtgcgggtgcgcgtgc 46 |||||||||||||||||||| Sbjct: 913 gcgggtgcgggtgcgcgtgc 894
>gb|AC122898.4| Mus musculus BAC clone RP23-71K9 from 1, complete sequence Length = 230945 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ggcgggtgcgggtgcgcgtg 45 |||||||||||||||||||| Sbjct: 34720 ggcgggtgcgggtgcgcgtg 34739
>ref|XM_848895.1| PREDICTED: Canis familiaris similar to proline rich 7 (synaptic) (LOC611253), mRNA Length = 983 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gcgggtgcgggtgcgcgtgc 46 |||||||||||||||||||| Sbjct: 337 gcgggtgcgggtgcgcgtgc 318
>gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume architecture 1 (tga1) gene, complete cds Length = 169976 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 19776 gcagggagagggaggccgcg 19795
>emb|AL079335.29|HSJ132F21 Human DNA sequence from clone RP1-132F21 on chromosome 20 Contains the 5' end a novel gene, the C20orf118 gene, the 3' end of the SAMHD1 gene for SAM domain and HD domain 1 and a CpG island, complete sequence Length = 71117 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gagggaggccgcgatggagg 167 |||||||||||||||||||| Sbjct: 24470 gagggaggccgcgatggagg 24451
>gb|AY883496.1| Zea mays subsp. parviglumis cultivar INIFAP-JSG 197 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 585 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883495.1| Zea mays subsp. mexicana cultivar LMP-Puga 11066 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 585 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883493.1| Zea mays subsp. parviglumis cultivar HHI-Iltis &Cochrane 81 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 583 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883492.1| Zea mays subsp. parviglumis cultivar TAK-Kato Site 4 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 583 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883490.1| Zea mays subsp. parviglumis cultivar INIFAP-JSG y LOS 161 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 583 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883489.1| Zea mays subsp. parviglumis cultivar INIFAP-JSG y LOS 119 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 582 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883488.1| Zea mays subsp. parviglumis cultivar HGW-Wilkes Site 6 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 582 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883487.1| Zea mays subsp. parviglumis cultivar INIFAP-JSG y MAS 264 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 582 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883486.1| Zea mays subsp. parviglumis cultivar GWB-Beadle&Kato Site 4 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 580 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883485.1| Zea mays subsp. parviglumis cultivar INIFAP-JSG 374 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 572 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883484.1| Zea mays subsp. parviglumis cultivar CIMMYT 8783 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 583 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883483.1| Zea mays subsp. parviglumis cultivar INIFAP-JSG y LOS 130 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 584 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883482.1| Zea mays subsp. parviglumis cultivar INIFAP-JSG y MAS 401 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 597 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883481.1| Zea mays subsp. parviglumis cultivar CIMMYT-11355 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 583 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883480.1| Zea mays subsp. parviglumis cultivar INIFAP-JSG 378 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 599 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883479.1| Zea mays subsp. parviglumis cultivar INIFAP-JSG y LOS 109 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 577 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883478.1| Zea mays cultivar INIFAP-PUE32 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 589 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883477.1| Zea mays cultivar INIFAP-MEX48 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 588 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883476.1| Zea mays cultivar CIMMYT-OAX70 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 600 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883475.1| Zea mays cultivar NRC-SAN329 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 590 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883474.1| Zea mays cultivar INIFAP-SIN2 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 599 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883473.1| Zea mays cultivar NCGRP-CHI349 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 600 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883472.1| Zea mays cultivar CIMMYT-URGII teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 600 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883471.1| Zea mays cultivar CIMMYT-GUA131 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 602 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883470.1| Zea mays cultivar NCGRP-MAG450 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 590 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883469.1| Zea mays cultivar ICA-VEN453 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 589 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883468.1| Zea mays cultivar INIFAP-OAX68 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 586 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883467.1| Zea mays cultivar INIFAP-GUA14 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 600 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883466.1| Zea mays cultivar PCIM-APC13 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 600 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883465.1| Zea mays cultivar INIFAP-YUC7 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 590 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883464.1| Zea mays cultivar CIMMYT-CHH160 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 600 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883463.1| Zea mays cultivar NCRPIS-PI213793 teosinte glume architecture 1 (tga1) gene, exon 1, intron 1, and partial cds Length = 600 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883565.1|AY883568S2 Zea mays cultivar inbred line W22: TGA teosinte glume architecture 1 (tga1) gene, exon 1 Length = 449 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883561.1|AY883564S2 Zea mays cultivar inbred line W22 teosinte glume architecture 1 (tga1) gene, exon 1 Length = 449 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 224 gcagggagagggaggccgcg 243
>gb|AY883560.1| Zea mays cultivar inbred line W22 teosinte glume architecture 1 (tga1) mRNA, complete cds Length = 1469 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcagggagagggaggccgcg 160 |||||||||||||||||||| Sbjct: 270 gcagggagagggaggccgcg 289
>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13 Length = 348247 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 cgtcgcgatgggcgccgccg 296 |||||||||||||||||||| Sbjct: 25262 cgtcgcgatgggcgccgccg 25243
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 cgtcgcgatgggcgccgccg 296 |||||||||||||||||||| Sbjct: 224134 cgtcgcgatgggcgccgccg 224115
>emb|AJ001641.1|RNBRAIN1 Rattus norvegicus mRNA for Brain-1 (Brn-1) protein Length = 3050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ggcgggtgcgggtgcgcgtg 45 |||||||||||||||||||| Sbjct: 911 ggcgggtgcgggtgcgcgtg 892
>gb|AC108073.3| Homo sapiens BAC clone RP11-713C19 from 4, complete sequence Length = 225639 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 tggaggtcggcttcttgggg 181 |||||||||||||||||||| Sbjct: 76867 tggaggtcggcttcttgggg 76886
>gb|AF513981.1| Drosophila virilis even skipped (eve) gene, muscle and heart enhancer MHE sequence Length = 1293 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 aagaagagtagcagcagcag 144 |||||||||||||||||||| Sbjct: 261 aagaagagtagcagcagcag 242
>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence Length = 48498 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gcgggtgcgggtgcgcgtgc 46 |||||||||||||||||||| Sbjct: 33510 gcgggtgcgggtgcgcgtgc 33529
>gb|AY069915.1| Arabidopsis thaliana AT3g53390/F4P12_90 mRNA sequence Length = 2160 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gaagacgaagaagagtagca 137 |||||||||||||||||||| Sbjct: 221 gaagacgaagaagagtagca 240
>gb|AC015584.18| Mus musculus, clone RP23-400H17, complete sequence Length = 214875 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gcgggtgcgggtgcgcgtgc 46 |||||||||||||||||||| Sbjct: 142629 gcgggtgcgggtgcgcgtgc 142610
>gb|AY789003.1| Diaprepes abbreviatus clone DP1-G2 microsatellite sequence Length = 536 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gcgggtgcgggtgcgcgtgc 46 |||||||||||||||||||| Sbjct: 249 gcgggtgcgggtgcgcgtgc 268
>gb|DQ066296.1| Ixodes scapularis isolate is-all-382 guanine nucleotide-binding protein mRNA, complete cds Length = 957 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 tggccaagtgcaagtacaccatcg 344 ||||| |||||||||||||||||| Sbjct: 404 tggcccagtgcaagtacaccatcg 427
>emb|BX823385.1|CNS0A7GT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS30ZF10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2228 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gaagacgaagaagagtagca 137 |||||||||||||||||||| Sbjct: 197 gaagacgaagaagagtagca 216
>ref|NM_001015490.1| Drosophila melanogaster CG40306-PA.3 (CG40306), mRNA Length = 8140 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ggcgggtgcgggtgcgcgtg 45 |||||||||||||||||||| Sbjct: 3024 ggcgggtgcgggtgcgcgtg 3005
>ref|NM_001015489.1| Drosophila melanogaster CG40306-PB.3 (CG40306), mRNA Length = 8140 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ggcgggtgcgggtgcgcgtg 45 |||||||||||||||||||| Sbjct: 3024 ggcgggtgcgggtgcgcgtg 3005
>ref|NM_138837.1| Rattus norvegicus POU domain, class 3, transcription factor 3 (Pou3f3), mRNA Length = 3050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ggcgggtgcgggtgcgcgtg 45 |||||||||||||||||||| Sbjct: 911 ggcgggtgcgggtgcgcgtg 892
>dbj|AP004160.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1197_E09 Length = 67368 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gcgggtgcgggtgcgcgtgc 46 |||||||||||||||||||| Sbjct: 3110 gcgggtgcgggtgcgcgtgc 3129
>dbj|AP003538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0059O19 Length = 144386 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gcgggtgcgggtgcgcgtgc 46 |||||||||||||||||||| Sbjct: 38400 gcgggtgcgggtgcgcgtgc 38419
>dbj|AP004188.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1493_H11 Length = 106693 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gcgggtgcgggtgcgcgtgc 46 |||||||||||||||||||| Sbjct: 72105 gcgggtgcgggtgcgcgtgc 72124
>gb|AC133952.4| Mus musculus BAC clone RP23-114H2 from 1, complete sequence Length = 236382 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ggcgggtgcgggtgcgcgtg 45 |||||||||||||||||||| Sbjct: 71796 ggcgggtgcgggtgcgcgtg 71777
>gb|AC113951.13| Mus musculus chromosome 8, clone RP24-161A21, complete sequence Length = 166298 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 agtagcagcagcagggagag 150 |||||||||||||||||||| Sbjct: 110510 agtagcagcagcagggagag 110529
>gb|AE003573.4| Drosophila melanogaster chromosome X, section 74 of 74 of the complete sequence Length = 313035 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ggcgggtgcgggtgcgcgtg 45 |||||||||||||||||||| Sbjct: 283597 ggcgggtgcgggtgcgcgtg 283616
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 gctcgtcgcgatgggcgccg 293 |||||||||||||||||||| Sbjct: 410989 gctcgtcgcgatgggcgccg 410970
>emb|AL928644.12| Mouse DNA sequence from clone RP23-313J15 on chromosome 2, complete sequence Length = 219870 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gcgggtgcgggtgcgcgtgc 46 |||||||||||||||||||| Sbjct: 190690 gcgggtgcgggtgcgcgtgc 190671
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12 Length = 144628 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gaagacgaagaagagtagca 137 |||||||||||||||||||| Sbjct: 33421 gaagacgaagaagagtagca 33440
>gb|U54982.1|DMU54982 Drosophila melanogaster stn-A and stn-B mRNA, complete cds Length = 8136 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ggcgggtgcgggtgcgcgtg 45 |||||||||||||||||||| Sbjct: 3079 ggcgggtgcgggtgcgcgtg 3060
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 ggcatcatgggtaaggcaatggcg 208 ||||||||||||||| |||||||| Sbjct: 179949 ggcatcatgggtaagccaatggcg 179972
>gb|M88299.1|MUSPOUDOMA Mouse brain-1 POU-domain protein, complete cds Length = 4000 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ggcgggtgcgggtgcgcgtg 45 |||||||||||||||||||| Sbjct: 2839 ggcgggtgcgggtgcgcgtg 2820 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,014,256 Number of Sequences: 3902068 Number of extensions: 3014256 Number of successful extensions: 69855 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69030 Number of HSP's gapped (non-prelim): 825 length of query: 446 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 424 effective length of database: 17,147,199,772 effective search space: 7270412703328 effective search space used: 7270412703328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)