>CHIT1_TULBA (Q9SLP4) Chitinase 1 precursor (EC 3.2.1.14) (Tulip bulb|
           chitinase-1) (TBC-1)
          Length = 314

 Score =  156 bits (394), Expect = 3e-38
 Identities = 77/134 (57%), Positives = 98/134 (73%)
 Frame = +3

Query: 54  IAMTNGYLFREYIGAQFTGVRFSDVPVNTGVSFHYILAFAIDYTPVAQKPTPTPTNGAFS 233
           + +T+  +FREYIG+QF  V+FSDVP+N  V FH+ILAFAIDYT      +PTPTNG F 
Sbjct: 21  LPLTSALVFREYIGSQFNDVKFSDVPINPDVDFHFILAFAIDYT---SGSSPTPTNGNFK 77

Query: 234 AFWDTASLSRADVAAIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSR 413
            FWDT +LS + VAA+K  H NV V + LGGDSV     V F+P+SV SWV NAV+SL+R
Sbjct: 78  PFWDTNNLSPSQVAAVKRTHSNVKVSLSLGGDSVGG-KNVFFSPSSVSSWVENAVSSLTR 136

Query: 414 LINEYGLDGVDVDY 455
           +I +Y LDG+D+DY
Sbjct: 137 IIKQYHLDGIDIDY 150

>CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chitinase-2) (TBC-2)|
          Length = 275

 Score =  151 bits (381), Expect = 9e-37
 Identities = 77/127 (60%), Positives = 95/127 (74%)
 Frame = +3

Query: 75  LFREYIGAQFTGVRFSDVPVNTGVSFHYILAFAIDYTPVAQKPTPTPTNGAFSAFWDTAS 254
           LFREYIGAQF  V+FSDVP+N  V FH+ILAFAIDYT      +PTPTNG F+ FWDT +
Sbjct: 2   LFREYIGAQFNDVKFSDVPINPNVDFHFILAFAIDYT---SGSSPTPTNGNFNPFWDTNN 58

Query: 255 LSRADVAAIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSRLINEYGL 434
           LS + VAAIK  + NV V V LGG+SV    +V F P+SV SWV NAV+SL+++I +Y L
Sbjct: 59  LSPSQVAAIKRTYNNVKVSVSLGGNSVGG-ERVFFNPSSVSSWVDNAVSSLTKIIKQYHL 117

Query: 435 DGVDVDY 455
           DG+D+DY
Sbjct: 118 DGIDIDY 124

>RUAP_SOYBN (P39657) RuBisCO-associated protein|
          Length = 283

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
 Frame = +3

Query: 126 VPVNTGVSFHYILAFAIDYTPVAQKPTPTPTNGAFSAFWDTASLSRADVAAIKAAHP--- 296
           +P N    F   L+ A DY           TNG F  +WDT  ++   +   K  +    
Sbjct: 22  IPENI-TEFQVTLSLARDYDG------NNSTNGKFIPYWDTEKVTPEVIKKFKKKYEPTA 74

Query: 297 -NVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSRLINEYGLDGVDVDY 455
             V V+V +G  + Q    +    NS ++WV+ A ASL  +I  Y LDG+DV Y
Sbjct: 75  LRVKVLVSIGNKNKQFPFTIGSDSNS-EAWVSEATASLKSIIKTYNLDGIDVSY 127

>CHIX_STROI (Q05638) Exochitinase 1 precursor (EC 3.2.1.14)|
          Length = 597

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 28/172 (16%)
 Frame = +3

Query: 24  LTPRPAPARSIAMTNGY------LFREYIGAQFTGVRFSDVPVNTGVSF-HYILAFAIDY 182
           LTP  A A  +A  NG              A  TG   +D+P +  V + H   A    Y
Sbjct: 221 LTPDTAYAFQVAAVNGAGESAKSATVTATTAPGTGGGSADLPPHALVGYLHASFANGSGY 280

Query: 183 TPVAQKPTPTPTNGAFSAFWDTASLSRADV--------------------AAIKAAHP-N 299
           T +A  P          AF +  S++  D+                    AAIKA     
Sbjct: 281 TRLADVPDSWDVIDL--AFGEPTSVTSGDIRFDRCPATECPNVESDAEFKAAIKAKQAAG 338

Query: 300 VSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSRLINEYGLDGVDVDY 455
             V++ +GG + Q  +  + A ++        V+S+S++I+EYGLDG+D+D+
Sbjct: 339 KKVLISIGGQNGQVQLTTTAARDTF-------VSSVSKIIDEYGLDGLDIDF 383

>CHIB_SERMA (P11797) Chitinase B precursor (EC 3.2.1.14)|
          Length = 499

 Score = 37.4 bits (85), Expect = 0.018
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
 Frame = +3

Query: 219 NGAFSAFWDTAS--LSRADVA----AIKAAHPNVSVMVGLGGDSVQDIVKVSFAP--NSV 374
           N      WD A+      DV     A+KA +P++ +M  +GG    + + VS A   N+V
Sbjct: 55  NSNLECAWDPATNDAKARDVVNRLTALKAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAV 114

Query: 375 DSWVANA--VASLSRLINEYGLDGVDVDY 455
            +  A      S  R++ +YG DGVD+D+
Sbjct: 115 KTPAARTKFAQSCVRIMKDYGFDGVDIDW 143

>SFRIP_HUMAN (Q99590) SFRS2-interacting protein (Splicing factor,|
            arginine/serine-rich 2-interacting protein)
            (SC35-interacting protein 1) (CTD-associated SR protein
            11) (Splicing regulatory protein 129) (SRrp129)
            (NY-REN-40 antigen)
          Length = 1148

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 38/125 (30%), Positives = 50/125 (40%), Gaps = 16/125 (12%)
 Frame = +3

Query: 6    SGVPLI-----------LTPRPAPARSIAMTNGYLFREYIGAQFTGVRFSDVPVNTGVSF 152
            +GVPL+           L P P P       N      YI +Q  G +   +P ++ VS 
Sbjct: 944  TGVPLMQVATPTSVSQGLPPPPPPPPPSQQVN------YIASQPDGKQLQGIPSSSHVSN 997

Query: 153  HYILAFAIDYTPVAQKPTPTPTN-----GAFSAFWDTASLSRADVAAIKAAHPNVSVMVG 317
            +         TPV   PT  P N     G  S    ++S S+A  AA+K A   VSV V 
Sbjct: 998  NMS-------TPVLPAPTAAPGNTGMVQGPSSGNTSSSSHSKASNAAVKLAESKVSVAVE 1050

Query: 318  LGGDS 332
               DS
Sbjct: 1051 ASADS 1055

>CHIT_CAEEL (Q11174) Probable endochitinase (EC 3.2.1.14)|
          Length = 617

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 10/147 (6%)
 Frame = +3

Query: 45  ARSIAM---TNGYLFREYIG--AQFTGVRFSDVPVN--TGVSFHYILAFA---IDYTPVA 194
           +RS+A    TN Y+   Y    AQ+   R   VP +   G+  H + AF     DYT  A
Sbjct: 41  SRSVARSEPTNSYIRPCYFTNWAQYRQGRAKFVPEDYTPGLCTHILFAFGWMNADYTVRA 100

Query: 195 QKPTPTPTNGAFSAFWDTASLSRADVAAIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSV 374
             P   P +      W    + R  V  +K     +  ++  GG S    +    A +S 
Sbjct: 101 YDPADLPND------WAGEGMYRR-VNKLKVTDTQLKTLLSFGGWSFGTALFQGMAASSA 153

Query: 375 DSWVANAVASLSRLINEYGLDGVDVDY 455
              V   + S    +  +G DG+D+D+
Sbjct: 154 SRKVF--IDSAITFVRTWGFDGIDIDW 178

>RS15_YEAST (Q01855) 40S ribosomal protein S15 (S21) (YS21) (RP52) (RIG|
           protein)
          Length = 142

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = +3

Query: 33  RPAPARSIAMTNGYLFREYIGAQ---FTGVRFSDVPVNTGVSFHYILAFAIDYTPV 191
           +PAP R+  M N  +  E IG+    + G  F+ V +   +  HY+  F+I YTPV
Sbjct: 72  KPAPVRT-HMRNMIIVPEMIGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTPV 126

>CHIT3_DROME (Q9W5U2) Probable chitinase 3 (EC 3.2.1.14)|
          Length = 458

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
 Frame = +3

Query: 63  TNGYLFREYIGAQFTGVRFSDVPVNTGVSFHYILAFAI-DYTPVAQKPTPTPTNGAFSAF 239
           TN   +R+ IG      RF+   +NT +  H I  FA+ DY+ +  +           ++
Sbjct: 180 TNWAWYRKGIG------RFTPDDINTELCTHVIYGFAVLDYSELVLR--------THDSW 225

Query: 240 WDTASLSRADVAAIKAAHPNVSVMVGLGGDSVQD-IVKVSFAPNSVDSWVANAVASLSRL 416
            D  +     V ++K+    VS+ +G   DS  D   ++  +P +   +V +A+      
Sbjct: 226 ADVENNFYTRVTSLKSKGIKVSLALGGWNDSQGDKYSRLVRSPMARSRFVRHAL----EF 281

Query: 417 INEYGLDGVDVDY 455
           I +YG +G+D+D+
Sbjct: 282 IEKYGFEGLDLDW 294

>Y2598_MYCBO (P65010) Hypothetical protein Mb2598c|
          Length = 341

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 21/55 (38%), Positives = 27/55 (49%)
 Frame = -3

Query: 376 STELGAKETLTMSCTLSPPRPTMTLTFGCAALMAATSARDRLAVSQNALNAPLVG 212
           S +LG    L  SC L+  RP+ T T G A    A  A+ RL    + L  P+VG
Sbjct: 62  SDQLGG---LCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVG 113

>Y2568_MYCTU (P65009) Hypothetical protein Rv2568c/MT2644|
          Length = 341

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 21/55 (38%), Positives = 27/55 (49%)
 Frame = -3

Query: 376 STELGAKETLTMSCTLSPPRPTMTLTFGCAALMAATSARDRLAVSQNALNAPLVG 212
           S +LG    L  SC L+  RP+ T T G A    A  A+ RL    + L  P+VG
Sbjct: 62  SDQLGG---LCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVG 113

>CH47_DROME (Q23997) Chitinase-like protein DS47 precursor|
          Length = 452

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
 Frame = +3

Query: 270 VAAIKAAHPNVSVMVGLGGDSVQDIVK-VSFAPNSVDSWVANA------VASLSRLINEY 428
           V  +K  +PNV +++ +GGD   ++ K     PN     + +       V ++  L+  Y
Sbjct: 96  VTRLKRKYPNVKILLSVGGDKDIELDKDAKELPNKYLELLESPTGRTRFVNTVYSLVKTY 155

Query: 429 GLDGVDV 449
           G DG+DV
Sbjct: 156 GFDGLDV 162

>RAI1_HUMAN (Q7Z5J4) Retinoic acid-induced protein 1|
          Length = 1906

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +3

Query: 186 PVAQKPTPTPTNGAFSAFWDTASLSRADVA 275
           P    P P PT  AF  F DT + S AD A
Sbjct: 712 PTLGVPAPDPTTAAFDCFPDTTAASSADSA 741

>MTRC_METKA (O32865) Tetrahydromethanopterin S-methyltransferase subunit C (EC|
           2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M
           methyltransferase subunit C)
          Length = 270

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = +3

Query: 240 WDTASLSRADVAAIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASL 407
           W   ++ R     +    P++  M GLGG SV  I+  + + N+V +W A  + ++
Sbjct: 63  WGADAVRRVAGYGLGTGVPSIGFM-GLGGGSVAAILAAALSGNTVPAWAAAIIGTV 117

>IDGF2_DROME (Q9V3D4) Chitinase-like protein Idgf2 precursor (Imaginal disk|
           growth factor protein 2)
          Length = 440

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 10/74 (13%)
 Frame = +3

Query: 264 ADVAAIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWV----------ANAVASLSR 413
           ++V ++K  +P++ V++ +GGD   D       P+  + ++             + S   
Sbjct: 85  SEVTSLKRKYPHLKVLLSVGGDHDID-------PDHPNKYIDLLEGEKVRQIGFIRSAYD 137

Query: 414 LINEYGLDGVDVDY 455
           L+  YG DG+D+ Y
Sbjct: 138 LVKTYGFDGLDLAY 151

>RS15D_ARATH (Q9FY64) 40S ribosomal protein S15-4|
          Length = 152

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +3

Query: 33  RPAPARSIAMTNGYLFREYIGA---QFTGVRFSDVPVNTGVSFHYILAFAIDYTPV 191
           +P P R+  + N  +  E IG+    + G  F+ V +   +  HY+  F+I Y PV
Sbjct: 79  KPEPVRT-HLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPV 133

>RS151_ARATH (Q08112) 40S ribosomal protein S15-1|
          Length = 152

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +3

Query: 33  RPAPARSIAMTNGYLFREYIGA---QFTGVRFSDVPVNTGVSFHYILAFAIDYTPV 191
           +P P R+  + N  +  E IG+    + G  F+ V +   +  HY+  F+I Y PV
Sbjct: 79  KPEPVRT-HLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPV 133

>CHIT2_DROME (Q9W092) Probable chitinase 2 precursor (EC 3.2.1.14)|
          Length = 484

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/62 (24%), Positives = 31/62 (50%)
 Frame = +3

Query: 270 VAAIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSRLINEYGLDGVDV 449
           +  +K +HP++ V + +GG +       +   N++       V  +S  I +Y  DG+D+
Sbjct: 108 MTGLKRSHPHLKVSLAIGGWNEGSANYSTLVANNLLR--GRFVKQVSSFIRKYNFDGLDL 165

Query: 450 DY 455
           D+
Sbjct: 166 DW 167

>RS15_PICMA (O65059) 40S ribosomal protein S15|
          Length = 151

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +3

Query: 33  RPAPARSIAMTNGYLFREYIGA---QFTGVRFSDVPVNTGVSFHYILAFAIDYTPV 191
           +P P R+  + N  +  E IG+    + G  F+ V +   +  HY+  F+I Y PV
Sbjct: 78  KPEPVRT-HLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPV 132

>RS15_ELAOL (Q945U1) 40S ribosomal protein S15|
          Length = 153

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +3

Query: 33  RPAPARSIAMTNGYLFREYIGA---QFTGVRFSDVPVNTGVSFHYILAFAIDYTPV 191
           +P P R+  + N  +  E IG+    + G  F+ V +   +  HY+  F+I Y PV
Sbjct: 80  KPEPVRT-HLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPV 134

>NQO2_PARDE (P29914) NADH-quinone oxidoreductase chain 2 (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain 2) (NDH-1, chain 2)
          Length = 239

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 21/61 (34%), Positives = 31/61 (50%)
 Frame = +3

Query: 162 LAFAIDYTPVAQKPTPTPTNGAFSAFWDTASLSRADVAAIKAAHPNVSVMVGLGGDSVQD 341
           LA  ID     + P P P NG FSA       + AD+   +A + +V+  + L GDS++ 
Sbjct: 162 LAALIDRFAAGEVPVPGPQNGRFSAEALGGPTALADLKGGEAHNASVARALRL-GDSIKR 220

Query: 342 I 344
           I
Sbjct: 221 I 221

>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 21/83 (25%), Positives = 36/83 (43%)
 Frame = +3

Query: 177 DYTPVAQKPTPTPTNGAFSAFWDTASLSRADVAAIKAAHPNVSVMVGLGGDSVQDIVKVS 356
           DY PV QK +  P   A    W T S  R +      ++    + V LGG   ++I+   
Sbjct: 436 DYDPV-QKISIIPRGRAGGLTWFTPSEDRMESGLYSRSYLQNQMAVALGGRIAEEII--- 491

Query: 357 FAPNSVDSWVANAVASLSRLINE 425
           F    V +  +N +  ++R+  +
Sbjct: 492 FGEEEVTTGASNDLQQVARVARQ 514

>AROC_PROAC (Q6A8I4) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 398

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 27/92 (29%), Positives = 35/92 (38%)
 Frame = +3

Query: 141 GVSFHYILAFAIDYTPVAQKPTPTPTNGAFSAFWDTASLSRADVAAIKAAHPNVSVMVGL 320
           G+S   IL       P+A  P   PT    +     A   R+DV A+ AA      M  L
Sbjct: 301 GMSTGQILRVRAAMKPIATVPRALPTVDVTTGEAANAHHQRSDVCAVPAAGVVAEAMAAL 360

Query: 321 GGDSVQDIVKVSFAPNSVDSWVANAVASLSRL 416
               + +     F  +SV     NA A L RL
Sbjct: 361 ---VLAECALEKFGGDSVTETRRNAQAYLDRL 389


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,523,660
Number of Sequences: 219361
Number of extensions: 683454
Number of successful extensions: 2710
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2702
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)