>SYDC_YEAST (P04802) Aspartyl-tRNA synthetase, cytoplasmic (EC 6.1.1.12)|
           (Aspartate--tRNA ligase) (AspRS)
          Length = 556

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
 Frame = +3

Query: 204 ISKKQLKKDARKAEKAGKASXXXXXXXXXAEEADPFAA-------NYGDVPVEEIQSKVI 362
           +SKK LKK  ++ EK  K            E  +  AA       NYG +P+ + +    
Sbjct: 28  LSKKALKKLQKEQEKQRKKEERALQLEAEREAREKKAAAEDTAKDNYGKLPLIQSRDSDR 87

Query: 363 SGRTWTDIGDLDEAA-AGRSVLIRGSAQTLR 452
           +G+      DLDEA  + + VL R      R
Sbjct: 88  TGQKRVKFVDLDEAKDSDKEVLFRARVHNTR 118

>SYD_CAEEL (Q03577) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 531

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
 Frame = +3

Query: 204 ISKKQLKKDARKAEKAGKASXXXXXXXXXA-----EEADPFAANYGDVPVEEIQSKVISG 368
           +SKK+L K ARKA+K  KA          A     + +  F  +YG V  +E   KV++ 
Sbjct: 12  LSKKELNKLARKAKKDEKAGEKGGNQQQAAAMDQEDASKDFYGSYGLVNSKE--KKVLN- 68

Query: 369 RTWTDIGDLDEAAAGRSVLIRGSAQTLR 452
             +  + +++ + A + V +RG   T R
Sbjct: 69  --FLKVKEINVSNATKDVWVRGRIHTTR 94

>PTP3_ENCCU (Q8MTP3) Polar tube protein 3 precursor|
          Length = 1256

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 19/80 (23%), Positives = 35/80 (43%)
 Frame = +3

Query: 213 KQLKKDARKAEKAGKASXXXXXXXXXAEEADPFAANYGDVPVEEIQSKVISGRTWTDIGD 392
           ++++K+A KA+K    +          + A+   A   +  +   + K +  +     GD
Sbjct: 514 EEMQKEAVKAQKEANENSA-------VKSAEEHLAKAAEQQIINNEGKSVFSKVLESTGD 566

Query: 393 LDEAAAGRSVLIRGSAQTLR 452
           + EAA  R    R  A+TLR
Sbjct: 567 ISEAAKAREEAERAMAETLR 586

>VG72_ICHV1 (Q00103) Hypothetical gene 72 protein|
          Length = 1350

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 13/42 (30%), Positives = 27/42 (64%)
 Frame = +3

Query: 327 DVPVEEIQSKVISGRTWTDIGDLDEAAAGRSVLIRGSAQTLR 452
           D+P++ + +++I+GR    +GDL+   A R  +I+ + + LR
Sbjct: 439 DLPID-LPNQIITGRVIESLGDLEGDIAARKEVIKKAVEALR 479

>GPDA_GEOKA (Q5KXT1) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 344

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
 Frame = -2

Query: 135 SRRWRAG---GEGKQE*GLAWSGGMVVDGVTLT 46
           SR WRAG   G+GK+   +  S GMVV+GV  T
Sbjct: 255 SRNWRAGYMLGQGKKLDEVLESMGMVVEGVRTT 287

>CARB_METMA (P58944) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)|
           (Carbamoyl-phosphate synthetase ammonia chain)
          Length = 1073

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +3

Query: 240 AEKAGKASXXXXXXXXXAEEADPFAANYGDVPVEEIQSKVISGRTWTDIGDLDE 401
           AEK GK           +    PF +    +P+ +I +KVI+G +  D+G  DE
Sbjct: 824 AEKGGKV--FVLEANPRSSRTIPFVSKAVGIPLAKIAAKVIAGHSLKDLGYTDE 875

>HIS4_GEOKA (Q5KVC9) 1-(5-phosphoribosyl)-5-[(5-|
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase)
          Length = 245

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +3

Query: 321 YGDVPVEEIQSKVISGRTWTDIGDLDEAAAGRSV 422
           YGD PV   +     G  W  + DLD A  GR V
Sbjct: 31  YGDSPVAMAEQFAAQGAEWIHMVDLDGAKEGRRV 64

>JAD1D_MOUSE (Q62240) Jumonji/ARID domain-containing protein 1D (SmcY protein)|
           (Histocompatibility Y antigen) (H-Y)
          Length = 1548

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +3

Query: 294 EEADPFAANYGDVPVEEIQSKVISGRTWTDIGDLDE 401
           E AD F A+Y ++PV  + ++V+    W  +  ++E
Sbjct: 398 EMADSFKADYFNMPVHMVPTEVVEKEFWRLVSSIEE 433

>GUNC_CELFI (P14090) Endoglucanase C precursor (EC 3.2.1.4)|
            (Endo-1,4-beta-glucanase C) (Cellulase C)
          Length = 1101

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 309  FAANYGDVPVEEIQSKVISGRTWTDIGDLDEAAAGRSVLIRGSAQT 446
            F A    VP   ++ +V +GR W D+      A G ++ +R +A+T
Sbjct: 939  FTAEASGVPAPTVRWQVRAGRGWKDVA----GATGTTLTVRATART 980

>SPP2_CANGA (Q6FMB1) Pre-mRNA-splicing factor SPP2|
          Length = 169

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +3

Query: 321 YGDVPVEEIQSKVISGRTWTDIGDLDEA 404
           Y ++PVEE  + ++ G  WTD  +L+++
Sbjct: 94  YEEMPVEEFGAAMLRGMGWTDENELEDS 121


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.304    0.128    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,301,481
Number of Sequences: 219361
Number of extensions: 458457
Number of successful extensions: 1065
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)