Clone Name | bart53f02 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_467194.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2141 Score = 178 bits (90), Expect = 1e-41 Identities = 129/142 (90%) Strand = Plus / Plus Query: 302 cgaccccttcgcggccaactacggcgatgtccccgtcgaggagatccagtccaaggtcat 361 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 349 cgaccccttcgcggccaactacggcgacgtccccgtcgaggagatccagtccaagaccat 408 Query: 362 ctccggcaggacctggaccgacatcggcgacctcgacgaggccgccgcgggccgctccgt 421 ||||||| | |||||||| ||||||| |||||||||||||||||| ||||||||||| Sbjct: 409 ctccggccgcgtgtggaccgagatcggcggcctcgacgaggccgccgccggccgctccgt 468 Query: 422 gctcatccgcggctccgcgcag 443 |||||||||||| |||||||| Sbjct: 469 cctcatccgcggcgccgcgcag 490 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 163 cctccacggaggagctcgaggctgacctgtccgccgcgaccatcagcaagaagcagctaa 222 ||||| ||| ||| |||| ||| || || ||| |||| |||||||||||||||||||| | Sbjct: 210 cctccgcgggggatctcgcggccgatctctcctccgccaccatcagcaagaagcagctca 269 Query: 223 agaaggacgcgcggaaggcggagaaggccgggaaggcgt 261 ||||||| ||| |||||||||||||||||| |||||||| Sbjct: 270 agaaggatgcgaggaaggcggagaaggccgagaaggcgt 308 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 122 cgccaccgccgcgatgtcgtcggagcc 148 |||| |||||||||||||||||||||| Sbjct: 154 cgcctccgccgcgatgtcgtcggagcc 180
>ref|XM_507519.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1717_A09.34 mRNA Length = 2163 Score = 178 bits (90), Expect = 1e-41 Identities = 129/142 (90%) Strand = Plus / Plus Query: 302 cgaccccttcgcggccaactacggcgatgtccccgtcgaggagatccagtccaaggtcat 361 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 349 cgaccccttcgcggccaactacggcgacgtccccgtcgaggagatccagtccaagaccat 408 Query: 362 ctccggcaggacctggaccgacatcggcgacctcgacgaggccgccgcgggccgctccgt 421 ||||||| | |||||||| ||||||| |||||||||||||||||| ||||||||||| Sbjct: 409 ctccggccgcgtgtggaccgagatcggcggcctcgacgaggccgccgccggccgctccgt 468 Query: 422 gctcatccgcggctccgcgcag 443 |||||||||||| |||||||| Sbjct: 469 cctcatccgcggcgccgcgcag 490 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 163 cctccacggaggagctcgaggctgacctgtccgccgcgaccatcagcaagaagcagctaa 222 ||||| ||| ||| |||| ||| || || ||| |||| |||||||||||||||||||| | Sbjct: 210 cctccgcgggggatctcgcggccgatctctcctccgccaccatcagcaagaagcagctca 269 Query: 223 agaaggacgcgcggaaggcggagaaggccgggaaggcgt 261 ||||||| ||| |||||||||||||||||| |||||||| Sbjct: 270 agaaggatgcgaggaaggcggagaaggccgagaaggcgt 308 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 122 cgccaccgccgcgatgtcgtcggagcc 148 |||| |||||||||||||||||||||| Sbjct: 154 cgcctccgccgcgatgtcgtcggagcc 180
>ref|XM_506897.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1717_A09.34 mRNA Length = 2199 Score = 178 bits (90), Expect = 1e-41 Identities = 129/142 (90%) Strand = Plus / Plus Query: 302 cgaccccttcgcggccaactacggcgatgtccccgtcgaggagatccagtccaaggtcat 361 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 407 cgaccccttcgcggccaactacggcgacgtccccgtcgaggagatccagtccaagaccat 466 Query: 362 ctccggcaggacctggaccgacatcggcgacctcgacgaggccgccgcgggccgctccgt 421 ||||||| | |||||||| ||||||| |||||||||||||||||| ||||||||||| Sbjct: 467 ctccggccgcgtgtggaccgagatcggcggcctcgacgaggccgccgccggccgctccgt 526 Query: 422 gctcatccgcggctccgcgcag 443 |||||||||||| |||||||| Sbjct: 527 cctcatccgcggcgccgcgcag 548 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 163 cctccacggaggagctcgaggctgacctgtccgccgcgaccatcagcaagaagcagctaa 222 ||||| ||| ||| |||| ||| || || ||| |||| |||||||||||||||||||| | Sbjct: 268 cctccgcgggggatctcgcggccgatctctcctccgccaccatcagcaagaagcagctca 327 Query: 223 agaaggacgcgcggaaggcggagaaggccgggaaggcgt 261 ||||||| ||| |||||||||||||||||| |||||||| Sbjct: 328 agaaggatgcgaggaaggcggagaaggccgagaaggcgt 366 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 122 cgccaccgccgcgatgtcgtcggagcc 148 |||| |||||||||||||||||||||| Sbjct: 212 cgcctccgccgcgatgtcgtcggagcc 238
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 178 bits (90), Expect = 1e-41 Identities = 129/142 (90%) Strand = Plus / Plus Query: 302 cgaccccttcgcggccaactacggcgatgtccccgtcgaggagatccagtccaaggtcat 361 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 28132530 cgaccccttcgcggccaactacggcgacgtccccgtcgaggagatccagtccaagaccat 28132589 Query: 362 ctccggcaggacctggaccgacatcggcgacctcgacgaggccgccgcgggccgctccgt 421 ||||||| | |||||||| ||||||| |||||||||||||||||| ||||||||||| Sbjct: 28132590 ctccggccgcgtgtggaccgagatcggcggcctcgacgaggccgccgccggccgctccgt 28132649 Query: 422 gctcatccgcggctccgcgcag 443 |||||||||||| |||||||| Sbjct: 28132650 cctcatccgcggcgccgcgcag 28132671 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 163 cctccacggaggagctcgaggctgacctgtccgccgcgaccatcagcaagaagcagctaa 222 ||||| ||| ||| |||| ||| || || ||| |||| |||||||||||||||||||| | Sbjct: 28132391 cctccgcgggggatctcgcggccgatctctcctccgccaccatcagcaagaagcagctca 28132450 Query: 223 agaaggacgcgcggaaggcggagaaggccgggaaggcgt 261 ||||||| ||| |||||||||||||||||| |||||||| Sbjct: 28132451 agaaggatgcgaggaaggcggagaaggccgagaaggcgt 28132489 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 122 cgccaccgccgcgatgtcgtcggagcc 148 |||| |||||||||||||||||||||| Sbjct: 28132335 cgcctccgccgcgatgtcgtcggagcc 28132361
>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1717_A09 Length = 203132 Score = 178 bits (90), Expect = 1e-41 Identities = 129/142 (90%) Strand = Plus / Plus Query: 302 cgaccccttcgcggccaactacggcgatgtccccgtcgaggagatccagtccaaggtcat 361 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 122177 cgaccccttcgcggccaactacggcgacgtccccgtcgaggagatccagtccaagaccat 122236 Query: 362 ctccggcaggacctggaccgacatcggcgacctcgacgaggccgccgcgggccgctccgt 421 ||||||| | |||||||| ||||||| |||||||||||||||||| ||||||||||| Sbjct: 122237 ctccggccgcgtgtggaccgagatcggcggcctcgacgaggccgccgccggccgctccgt 122296 Query: 422 gctcatccgcggctccgcgcag 443 |||||||||||| |||||||| Sbjct: 122297 cctcatccgcggcgccgcgcag 122318 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 163 cctccacggaggagctcgaggctgacctgtccgccgcgaccatcagcaagaagcagctaa 222 ||||| ||| ||| |||| ||| || || ||| |||| |||||||||||||||||||| | Sbjct: 122038 cctccgcgggggatctcgcggccgatctctcctccgccaccatcagcaagaagcagctca 122097 Query: 223 agaaggacgcgcggaaggcggagaaggccgggaaggcgt 261 ||||||| ||| |||||||||||||||||| |||||||| Sbjct: 122098 agaaggatgcgaggaaggcggagaaggccgagaaggcgt 122136 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 122 cgccaccgccgcgatgtcgtcggagcc 148 |||| |||||||||||||||||||||| Sbjct: 121982 cgcctccgccgcgatgtcgtcggagcc 122008
>dbj|AK119608.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F07, full insert sequence Length = 2199 Score = 178 bits (90), Expect = 1e-41 Identities = 129/142 (90%) Strand = Plus / Plus Query: 302 cgaccccttcgcggccaactacggcgatgtccccgtcgaggagatccagtccaaggtcat 361 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 407 cgaccccttcgcggccaactacggcgacgtccccgtcgaggagatccagtccaagaccat 466 Query: 362 ctccggcaggacctggaccgacatcggcgacctcgacgaggccgccgcgggccgctccgt 421 ||||||| | |||||||| ||||||| |||||||||||||||||| ||||||||||| Sbjct: 467 ctccggccgcgtgtggaccgagatcggcggcctcgacgaggccgccgccggccgctccgt 526 Query: 422 gctcatccgcggctccgcgcag 443 |||||||||||| |||||||| Sbjct: 527 cctcatccgcggcgccgcgcag 548 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 163 cctccacggaggagctcgaggctgacctgtccgccgcgaccatcagcaagaagcagctaa 222 ||||| ||| ||| |||| ||| || || ||| |||| |||||||||||||||||||| | Sbjct: 268 cctccgcgggggatctcgcggccgatctctcctccgccaccatcagcaagaagcagctca 327 Query: 223 agaaggacgcgcggaaggcggagaaggccgggaaggcgt 261 ||||||| ||| |||||||||||||||||| |||||||| Sbjct: 328 agaaggatgcgaggaaggcggagaaggccgagaaggcgt 366 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 122 cgccaccgccgcgatgtcgtcggagcc 148 |||| |||||||||||||||||||||| Sbjct: 212 cgcctccgccgcgatgtcgtcggagcc 238
>dbj|AK100516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100E07, full insert sequence Length = 2600 Score = 178 bits (90), Expect = 1e-41 Identities = 129/142 (90%) Strand = Plus / Plus Query: 302 cgaccccttcgcggccaactacggcgatgtccccgtcgaggagatccagtccaaggtcat 361 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 768 cgaccccttcgcggccaactacggcgacgtccccgtcgaggagatccagtccaagaccat 827 Query: 362 ctccggcaggacctggaccgacatcggcgacctcgacgaggccgccgcgggccgctccgt 421 ||||||| | |||||||| ||||||| |||||||||||||||||| ||||||||||| Sbjct: 828 ctccggccgcgtgtggaccgagatcggcggcctcgacgaggccgccgccggccgctccgt 887 Query: 422 gctcatccgcggctccgcgcag 443 |||||||||||| |||||||| Sbjct: 888 cctcatccgcggcgccgcgcag 909 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 163 cctccacggaggagctcgaggctgacctgtccgccgcgaccatcagcaagaagcagctaa 222 ||||| ||| ||| |||| ||| || || ||| |||| |||||||||||||||||||| | Sbjct: 629 cctccgcgggggatctcgcggccgatctctcctccgccaccatcagcaagaagcagctca 688 Query: 223 agaaggacgcgcggaaggcggagaaggccgggaaggcgt 261 ||||||| ||| |||||||||||||||||| |||||||| Sbjct: 689 agaaggatgcgaggaaggcggagaaggccgagaaggcgt 727 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 122 cgccaccgccgcgatgtcgtcggagcc 148 |||| |||||||||||||||||||||| Sbjct: 573 cgcctccgccgcgatgtcgtcggagcc 599
>dbj|AK098984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093E04, full insert sequence Length = 2140 Score = 178 bits (90), Expect = 1e-41 Identities = 129/142 (90%) Strand = Plus / Plus Query: 302 cgaccccttcgcggccaactacggcgatgtccccgtcgaggagatccagtccaaggtcat 361 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 348 cgaccccttcgcggccaactacggcgacgtccccgtcgaggagatccagtccaagaccat 407 Query: 362 ctccggcaggacctggaccgacatcggcgacctcgacgaggccgccgcgggccgctccgt 421 ||||||| | |||||||| ||||||| |||||||||||||||||| ||||||||||| Sbjct: 408 ctccggccgcgtgtggaccgagatcggcggcctcgacgaggccgccgccggccgctccgt 467 Query: 422 gctcatccgcggctccgcgcag 443 |||||||||||| |||||||| Sbjct: 468 cctcatccgcggcgccgcgcag 489 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 163 cctccacggaggagctcgaggctgacctgtccgccgcgaccatcagcaagaagcagctaa 222 ||||| ||| ||| |||| ||| || || ||| |||| |||||||||||||||||||| | Sbjct: 209 cctccgcgggggatctcgcggccgatctctcctccgccaccatcagcaagaagcagctca 268 Query: 223 agaaggacgcgcggaaggcggagaaggccgggaaggcgt 261 ||||||| ||| |||||||||||||||||| |||||||| Sbjct: 269 agaaggatgcgaggaaggcggagaaggccgagaaggcgt 307 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 122 cgccaccgccgcgatgtcgtcggagcc 148 |||| |||||||||||||||||||||| Sbjct: 153 cgcctccgccgcgatgtcgtcggagcc 179
>dbj|AK068513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154D06, full insert sequence Length = 2160 Score = 178 bits (90), Expect = 1e-41 Identities = 129/142 (90%) Strand = Plus / Plus Query: 302 cgaccccttcgcggccaactacggcgatgtccccgtcgaggagatccagtccaaggtcat 361 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 346 cgaccccttcgcggccaactacggcgacgtccccgtcgaggagatccagtccaagaccat 405 Query: 362 ctccggcaggacctggaccgacatcggcgacctcgacgaggccgccgcgggccgctccgt 421 ||||||| | |||||||| ||||||| |||||||||||||||||| ||||||||||| Sbjct: 406 ctccggccgcgtgtggaccgagatcggcggcctcgacgaggccgccgccggccgctccgt 465 Query: 422 gctcatccgcggctccgcgcag 443 |||||||||||| |||||||| Sbjct: 466 cctcatccgcggcgccgcgcag 487 Score = 89.7 bits (45), Expect = 7e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 201 accatcagcaagaagcagctaaagaaggacgcgcggaaggcggagaaggccgggaaggcg 260 |||||||||||||||||||| |||||||| ||| |||||||||||||||||| ||||||| Sbjct: 245 accatcagcaagaagcagctcaagaaggatgcgaggaaggcggagaaggccgagaaggcg 304 Query: 261 t 261 | Sbjct: 305 t 305 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 122 cgccaccgccgcgatgtcgtcggagcc 148 |||| |||||||||||||||||||||| Sbjct: 153 cgcctccgccgcgatgtcgtcggagcc 179
>gb|AY105608.1| Zea mays PCO070562 mRNA sequence Length = 1988 Score = 137 bits (69), Expect = 4e-29 Identities = 123/141 (87%) Strand = Plus / Plus Query: 303 gaccccttcgcggccaactacggcgatgtccccgtcgaggagatccagtccaaggtcatc 362 ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||| |||| Sbjct: 225 gacccgttcgcggccaactacggcgaggtccccgtcgaggagatccagtcaaaggccatc 284 Query: 363 tccggcaggacctggaccgacatcggcgacctcgacgaggccgccgcgggccgctccgtg 422 |||||| | | ||| || | |||||||||||||||| |||| ||||||||||||||| Sbjct: 285 tccggccgctcgtggtcccatgtcggcgacctcgacgactccgctgcgggccgctccgtg 344 Query: 423 ctcatccgcggctccgcgcag 443 || |||||||| |||||||| Sbjct: 345 cttatccgcggagccgcgcag 365 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 183 gctgacctgtccgccgcgaccatcagcaagaagcagctaaagaaggacgcgcggaaggcg 242 |||||||| |||||||| ||| ||||||||||||||| |||||||||||| |||||||| Sbjct: 105 gctgacctttccgccgctaccctcagcaagaagcagcagaagaaggacgcgaggaaggcg 164 Query: 243 gagaaggc 250 |||||||| Sbjct: 165 gagaaggc 172
>gb|DQ145270.1| Drosophila miranda neo-X TER94 gene, partial sequence Length = 1221 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 372 acctggaccgacatcggcgacctcga 397 ||||||||||||||||||| |||||| Sbjct: 484 acctggaccgacatcggcggcctcga 509
>ref|NM_001031158.1| Gallus gallus similar to SLA/LP autoantigen (LOC422808), mRNA Length = 4226 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 398 cgaggccgccgcgggccgctccgtgc 423 ||||| |||||||||||||||||||| Sbjct: 84 cgaggacgccgcgggccgctccgtgc 59
>emb|AJ851594.1| Gallus gallus mRNA for hypothetical protein, clone 9o5 Length = 4226 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 398 cgaggccgccgcgggccgctccgtgc 423 ||||| |||||||||||||||||||| Sbjct: 84 cgaggacgccgcgggccgctccgtgc 59
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 386 cggcgacctcgacgaggccgccgcgg 411 ||||||||||||||| |||||||||| Sbjct: 1498875 cggcgacctcgacgatgccgccgcgg 1498850
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 ccgccaccgccgcgatgtcgtc 142 |||||||||||||||||||||| Sbjct: 2150025 ccgccaccgccgcgatgtcgtc 2150004
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 cctcgccgccagcccgccacc 128 ||||||||||||||||||||| Sbjct: 33388381 cctcgccgccagcccgccacc 33388361
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 cctcgccgccagcccgccacc 128 ||||||||||||||||||||| Sbjct: 109730 cctcgccgccagcccgccacc 109750
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 cctcgccgccagcccgccacc 128 ||||||||||||||||||||| Sbjct: 33478891 cctcgccgccagcccgccacc 33478871
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 acctcgacgaggccgccgcgg 411 ||||||||||||||||||||| Sbjct: 522540 acctcgacgaggccgccgcgg 522520
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 gaaggcggagaaggccgggaa 256 ||||||||||||||||||||| Sbjct: 1739805 gaaggcggagaaggccgggaa 1739825
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 ccgccagcccgccaccgccgc 133 ||||||||||||||||||||| Sbjct: 1387658 ccgccagcccgccaccgccgc 1387678
>dbj|AK073074.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033015H04, full insert sequence Length = 2624 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 cctcgccgccagcccgccacc 128 ||||||||||||||||||||| Sbjct: 12 cctcgccgccagcccgccacc 32
>emb|Z28271.1|SCYKR046C S.cerevisiae chromosome XI reading frame ORF YKR046c Length = 1263 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 aggagatccagtccaaggtca 360 ||||||||||||||||||||| Sbjct: 543 aggagatccagtccaaggtca 523
>gb|DQ331166.1| Synthetic construct Saccharomyces cerevisiae clone FLH201759.01X PET10 gene, complete sequence Length = 852 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 aggagatccagtccaaggtca 360 ||||||||||||||||||||| Sbjct: 539 aggagatccagtccaaggtca 559
>emb|AL928826.9| Mouse DNA sequence from clone RP23-456N9 on chromosome 2, complete sequence Length = 180533 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 ccaccaccatcccaccagacc 83 ||||||||||||||||||||| Sbjct: 125890 ccaccaccatcccaccagacc 125910
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 ccgccagcccgccaccgccgc 133 ||||||||||||||||||||| Sbjct: 1064652 ccgccagcccgccaccgccgc 1064672
>gb|AY541063.1| Nocardia uniformis subsp. tsuyamanensis monocyclic beta-lactam antibiotic nocardicin A biosynthesis gene cluster, partial sequence Length = 33451 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 cgacctcgacgaggccgccg 408 |||||||||||||||||||| Sbjct: 16817 cgacctcgacgaggccgccg 16836
>gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence Length = 114178 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 gcgacctcgacgaggccgcc 407 |||||||||||||||||||| Sbjct: 108857 gcgacctcgacgaggccgcc 108838
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 cgacctcgacgaggccgccg 408 |||||||||||||||||||| Sbjct: 2320306 cgacctcgacgaggccgccg 2320287
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 tcgacgaggccgccgcgggc 413 |||||||||||||||||||| Sbjct: 870212 tcgacgaggccgccgcgggc 870193
>gb|BC055206.1| Danio rerio zgc:63691, mRNA (cDNA clone MGC:63691 IMAGE:5916131), complete cds Length = 1776 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 ccaccaccatcccaccagac 82 |||||||||||||||||||| Sbjct: 264 ccaccaccatcccaccagac 245
>ref|XM_847011.1| PREDICTED: Canis familiaris similar to SET and MYND domain containing protein 1, transcript variant 2 (LOC475758), mRNA Length = 1491 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 gcaagaagcagctaaagaag 227 |||||||||||||||||||| Sbjct: 803 gcaagaagcagctaaagaag 822
>ref|XM_532967.2| PREDICTED: Canis familiaris similar to SET and MYND domain containing protein 1, transcript variant 1 (LOC475758), mRNA Length = 1452 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 gcaagaagcagctaaagaag 227 |||||||||||||||||||| Sbjct: 764 gcaagaagcagctaaagaag 783
>ref|XM_381108.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00932.1) partial mRNA Length = 2796 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 cggcgacctcgacgaggccg 405 |||||||||||||||||||| Sbjct: 348 cggcgacctcgacgaggccg 367
>gb|BT009205.1| Triticum aestivum clone wle1n.pk0037.e9:fis, full insert mRNA sequence Length = 1013 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cggcgacctcgacgaggccg 405 |||||||||||||||||||| Sbjct: 553 cggcgacctcgacgaggccg 534
>emb|BX027062.1|CNS08T1M Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA40CD02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 633 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 gacctggaccgacatcggcg 390 |||||||||||||||||||| Sbjct: 47 gacctggaccgacatcggcg 66
>emb|X95444.1|SLRHOGENE S.lividans Rho gene Length = 2986 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 gaaggcggagaaggccgggaaggc 259 |||||||||||||||||| ||||| Sbjct: 734 gaaggcggagaaggccggcaaggc 757
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 cgacctcgacgaggccgccg 408 |||||||||||||||||||| Sbjct: 239270 cgacctcgacgaggccgccg 239251
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 cgacctcgacgaggccgccg 408 |||||||||||||||||||| Sbjct: 96886 cgacctcgacgaggccgccg 96867
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 cgacctcgacgaggccgccg 408 |||||||||||||||||||| Sbjct: 180486 cgacctcgacgaggccgccg 180467
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 gaaggcggagaaggccgggaaggc 259 |||||||||||||||||| ||||| Sbjct: 145608 gaaggcggagaaggccggcaaggc 145631
>emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; segment 2/2 Length = 178073 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 caccgccgcgatgtcgtcgg 144 |||||||||||||||||||| Sbjct: 161676 caccgccgcgatgtcgtcgg 161657
>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2 Length = 178000 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 caccgccgcgatgtcgtcgg 144 |||||||||||||||||||| Sbjct: 16398 caccgccgcgatgtcgtcgg 16417
>gb|AF497511.2| Zea mays alkaline alpha galactosidase 2 mRNA, complete cds Length = 2795 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 296 ggaggccgaccccttcgcggccaactacggcg 327 |||| |||||||||||||||||| || ||||| Sbjct: 911 ggagtccgaccccttcgcggccatctccggcg 942
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 cggcgacctcgacgaggccgccgc 409 |||||||||||||| ||||||||| Sbjct: 4097752 cggcgacctcgacgcggccgccgc 4097775
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 gacctcgacgaggccgccgcgggc 413 |||| ||||||||||||||||||| Sbjct: 10502976 gaccgcgacgaggccgccgcgggc 10502999
>gb|AC084558.1|CBRG35I24 Caenorhabditis briggsae cosmid G35I24, complete sequence Length = 24174 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tccaccaccatcccaccaga 81 |||||||||||||||||||| Sbjct: 21659 tccaccaccatcccaccaga 21678
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 cgacctcgacgaggccgccg 408 |||||||||||||||||||| Sbjct: 3911566 cgacctcgacgaggccgccg 3911547
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 cgtcgaggagatccagtccaaggt 358 |||||||| ||||||||||||||| Sbjct: 1824381 cgtcgaggtgatccagtccaaggt 1824404
>ref|NM_200484.1| Danio rerio zgc:63691 (zgc:63691), mRNA Length = 1776 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 ccaccaccatcccaccagac 82 |||||||||||||||||||| Sbjct: 264 ccaccaccatcccaccagac 245
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ccgccaccgccgcgatgtcg 140 |||||||||||||||||||| Sbjct: 605887 ccgccaccgccgcgatgtcg 605868
>dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1026E06 Length = 162784 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 gacctcgacgaggccgccgcgggc 413 |||| ||||||||||||||||||| Sbjct: 79590 gaccgcgacgaggccgccgcgggc 79613
>dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1066D09 Length = 183999 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 gacctcgacgaggccgccgcgggc 413 |||| ||||||||||||||||||| Sbjct: 39683 gaccgcgacgaggccgccgcgggc 39706
>ref|XM_315644.2| Anopheles gambiae str. PEST ENSANGP00000022801 (ENSANGG00000019258), partial mRNA Length = 2559 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 gacctggaccgacatcggcg 390 |||||||||||||||||||| Sbjct: 1413 gacctggaccgacatcggcg 1432
>dbj|AK065838.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039J03, full insert sequence Length = 3101 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cgccgccagcccgccaccgc 130 |||||||||||||||||||| Sbjct: 59 cgccgccagcccgccaccgc 78
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 cggcgacctcgacgaggccgccgc 409 |||||||||||||| ||||||||| Sbjct: 4097739 cggcgacctcgacgcggccgccgc 4097762
>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123469 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 cggcgacctcgacgaggccgccgc 409 |||||||||||||| ||||||||| Sbjct: 40148 cggcgacctcgacgcggccgccgc 40171
>emb|BX005189.9| Mouse DNA sequence from clone RP23-170L24 on chromosome X, complete sequence Length = 206372 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 ccaccaccatcccaccagac 82 |||||||||||||||||||| Sbjct: 114660 ccaccaccatcccaccagac 114641
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 tcgtcaaggtcaccccgtcc 64 |||||||||||||||||||| Sbjct: 2337620 tcgtcaaggtcaccccgtcc 2337639
>emb|AL845273.7| Mouse DNA sequence from clone RP23-334D15 on chromosome 2, complete sequence Length = 158861 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 caccaccatcccaccagacc 83 |||||||||||||||||||| Sbjct: 114687 caccaccatcccaccagacc 114668
>emb|AL663030.12| Mouse DNA sequence from clone RP23-84C12 on chromosome 11, complete sequence Length = 212085 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 cgcgcccgcctctgcctcca 168 |||||||||||||||||||| Sbjct: 37865 cgcgcccgcctctgcctcca 37884 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,250,329 Number of Sequences: 3902068 Number of extensions: 3250329 Number of successful extensions: 74219 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72191 Number of HSP's gapped (non-prelim): 2019 length of query: 457 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 435 effective length of database: 17,147,199,772 effective search space: 7459031900820 effective search space used: 7459031900820 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)