ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart53e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF527606.1| Hordeum vulgare iron/ascorbate-dependent oxidored... 307 1e-80
2ref|NM_185692.1| Oryza sativa (japonica cultivar-group), Ozsa804... 58 2e-05
3ref|XM_476309.1| Oryza sativa (japonica cultivar-group), predic... 58 2e-05
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 56 7e-05
5dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic D... 56 7e-05
6dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic D... 56 7e-05
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
8dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
9dbj|AK065581.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
10ref|NM_197542.1| Oryza sativa (japonica cultivar-group) unknown ... 44 0.27
11emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 44 0.27
12gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05 geno... 44 0.27
13gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D23 gen... 44 0.27
14gb|CP000249.1| Frankia sp. CcI3, complete genome 44 0.27
15dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
16dbj|AK061357.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.27
17gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.27
18ref|XM_541613.2| PREDICTED: Canis familiaris similar to Spectrin... 42 1.1
19ref|XM_476744.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.3
20ref|XM_595616.2| PREDICTED: Bos taurus similar to Myosin-9 (Myos... 40 4.3
21emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 4.3
22emb|BX640452.1| Bordetella bronchiseptica strain RB50, complete ... 40 4.3
23emb|BX640436.1| Bordetella parapertussis strain 12822, complete ... 40 4.3
24emb|BX640411.1| Bordetella pertussis strain Tohama I, complete g... 40 4.3
25gb|AF512431.1| Saccharothrix mutabilis subsp. capreolus nonribos... 40 4.3
26dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
27dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
28dbj|AK121818.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.3
29dbj|AK060318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.3
30gb|AY104706.1| Zea mays PCO076122 mRNA sequence 40 4.3
31gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 4.3
32dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 4.3 
>gb|AF527606.1| Hordeum vulgare iron/ascorbate-dependent oxidoreductase (Hcp1)
           mRNA, complete cds
          Length = 1360

 Score =  307 bits (155), Expect = 1e-80
 Identities = 254/287 (88%)
 Strand = Plus / Plus

                                                                       
Query: 37  aggagccgccgcgacagtacgtggtgcaggagcaggacggtcacggcgacctgctggccg 96
           ||||||||||| | | |||| | ||||| ||||| ||| |||||||||||||||||||||
Sbjct: 80  aggagccgccgagccggtacttagtgcacgagcaagaccgtcacggcgacctgctggccg 139

                                                                       
Query: 97  ccgacgagtttccggagcccatccccctcatcgatcttacccggctcacggacgtcgacg 156
           || ||||  | |||||||||||||| ||||| || |||| |||||||| ||||| |||||
Sbjct: 140 cccacgaaatgccggagcccatccctctcattgaccttagccggctcatggacgccgacg 199

                                                                       
Query: 157 aggccgaaaggctccgggcggcgctgcagacatggggcttcttcctggccaccaaccatg 216
           ||||||| | |||||||||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 200 aggccgacaagctccgggcggctctacagacctggggcttcttcctggccaccaaccatg 259

                                                                       
Query: 217 ggatcgaggactctctcatggatgccatcacgagcgtgtcgagggagttcttccggcagc 276
           |||||||||||||||||||||| || || | ||||| |||||||||||||||||| || |
Sbjct: 260 ggatcgaggactctctcatggaagcaatgatgagcgcgtcgagggagttcttccgtcaac 319

                                                          
Query: 277 cggcggaagagaagcagaaatgcagcaacctggtggacggcaacggc 323
           || | || |||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cgtctgaggagaagcagaaatgcagcaacctggtggacggcaacggc 366
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>ref|NM_185692.1| Oryza sativa (japonica cultivar-group), Ozsa8043 predicted mRNA
          Length = 1164

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 104/129 (80%)
 Strand = Plus / Plus

                                                                       
Query: 89  gctggccgccgacgagtttccggagcccatccccctcatcgatcttacccggctcacgga 148
           ||||| ||||| |||| | ||||||||||||||| || | ||||| | ||||||  | | 
Sbjct: 111 gctggtcgccgccgagctgccggagcccatccccgtcgttgatctcagccggctagccgg 170

                                                                       
Query: 149 cgtcgacgaggccgaaaggctccgggcggcgctgcagacatggggcttcttcctggccac 208
           || ||||||||| |  | |||| ||||||| |||||||  |||||||||||||||   ||
Sbjct: 171 cgccgacgaggctgccaagctcagggcggctctgcagaattggggcttcttcctgcttac 230

                    
Query: 209 caaccatgg 217
           |||||||||
Sbjct: 231 caaccatgg 239



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                             
Query: 9  gtgcaggagctggctgcggccggcgtcgaggagcc 43
          ||||| |||||||| ||||||||||||||||||||
Sbjct: 34 gtgcaagagctggcggcggccggcgtcgaggagcc 68
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>ref|XM_476309.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1053

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 104/129 (80%)
 Strand = Plus / Plus

                                                                       
Query: 89  gctggccgccgacgagtttccggagcccatccccctcatcgatcttacccggctcacgga 148
           ||||| ||||| |||| | ||||||||||||||| || | ||||| | ||||||  | | 
Sbjct: 111 gctggtcgccgccgagctgccggagcccatccccgtcgttgatctcagccggctagccgg 170

                                                                       
Query: 149 cgtcgacgaggccgaaaggctccgggcggcgctgcagacatggggcttcttcctggccac 208
           || ||||||||| |  | |||| ||||||| |||||||  |||||||||||||||   ||
Sbjct: 171 cgccgacgaggctgccaagctcagggcggctctgcagaattggggcttcttcctgcttac 230

                    
Query: 209 caaccatgg 217
           |||||||||
Sbjct: 231 caaccatgg 239



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                             
Query: 9  gtgcaggagctggctgcggccggcgtcgaggagcc 43
          ||||| |||||||| ||||||||||||||||||||
Sbjct: 34 gtgcaagagctggcggcggccggcgtcgaggagcc 68
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 94/116 (81%)
 Strand = Plus / Plus

                                                                           
Query: 89      gctggccgccgacgagtttccggagcccatccccctcatcgatcttacccggctcacgga 148
               ||||| ||||| |||| | ||||||||||||||| || | ||||| | ||||||  | | 
Sbjct: 3904597 gctggtcgccgccgagctgccggagcccatccccgtcgttgatctcagccggctagccgg 3904656

                                                                       
Query: 149     cgtcgacgaggccgaaaggctccgggcggcgctgcagacatggggcttcttcctgg 204
               || ||||||||| |  | |||| ||||||| |||||||  ||||||||||||||||
Sbjct: 3904657 cgccgacgaggctgccaagctcagggcggctctgcagaattggggcttcttcctgg 3904712



 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 94/116 (81%)
 Strand = Plus / Plus

                                                                           
Query: 89      gctggccgccgacgagtttccggagcccatccccctcatcgatcttacccggctcacgga 148
               ||||| ||||| |||| | ||||||||||||||| || | ||||| | ||||||  | | 
Sbjct: 3892774 gctggtcgccgccgagctgccggagcccatccccgtcgttgatctcagccggctagccgg 3892833

                                                                       
Query: 149     cgtcgacgaggccgaaaggctccgggcggcgctgcagacatggggcttcttcctgg 204
               || ||||||||| |  | |||| ||||||| |||||||  ||||||||||||||||
Sbjct: 3892834 cgccgacgaggctgccaagctcagggcggctctgcagaattggggcttcttcctgg 3892889



 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 94/116 (81%)
 Strand = Plus / Plus

                                                                           
Query: 89      gctggccgccgacgagtttccggagcccatccccctcatcgatcttacccggctcacgga 148
               ||||| ||||| |||| | ||||||||||||||| || | ||||| | ||||||  | | 
Sbjct: 3854718 gctggtcgccgccgagctgccggagcccatccccgtcgttgatctcagccggctagccgg 3854777

                                                                       
Query: 149     cgtcgacgaggccgaaaggctccgggcggcgctgcagacatggggcttcttcctgg 204
               || ||||||||| |  | |||| ||||||| |||||||  ||||||||||||||||
Sbjct: 3854778 cgccgacgaggctgccaagctcagggcggctctgcagaattggggcttcttcctgg 3854833



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                  
Query: 9       gtgcaggagctggctgcggccggcgtcgaggagcc 43
               ||||| |||||||| ||||||||||||||||||||
Sbjct: 3904520 gtgcaagagctggcggcggccggcgtcgaggagcc 3904554



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                  
Query: 9       gtgcaggagctggctgcggccggcgtcgaggagcc 43
               ||||| |||||||| ||||||||||||||||||||
Sbjct: 3892697 gtgcaagagctggcggcggccggcgtcgaggagcc 3892731



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                  
Query: 9       gtgcaggagctggctgcggccggcgtcgaggagcc 43
               ||||| |||||||| ||||||||||||||||||||
Sbjct: 3854641 gtgcaagagctggcggcggccggcgtcgaggagcc 3854675
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>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0035I03
          Length = 153749

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 94/116 (81%)
 Strand = Plus / Plus

                                                                         
Query: 89    gctggccgccgacgagtttccggagcccatccccctcatcgatcttacccggctcacgga 148
             ||||| ||||| |||| | ||||||||||||||| || | ||||| | ||||||  | | 
Sbjct: 10473 gctggtcgccgccgagctgccggagcccatccccgtcgttgatctcagccggctagccgg 10532

                                                                     
Query: 149   cgtcgacgaggccgaaaggctccgggcggcgctgcagacatggggcttcttcctgg 204
             || ||||||||| |  | |||| ||||||| |||||||  ||||||||||||||||
Sbjct: 10533 cgccgacgaggctgccaagctcagggcggctctgcagaattggggcttcttcctgg 10588



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 9     gtgcaggagctggctgcggccggcgtcgaggagcc 43
             ||||| |||||||| ||||||||||||||||||||
Sbjct: 10396 gtgcaagagctggcggcggccggcgtcgaggagcc 10430
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>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0015E04
          Length = 152046

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 94/116 (81%)
 Strand = Plus / Plus

                                                                          
Query: 89     gctggccgccgacgagtttccggagcccatccccctcatcgatcttacccggctcacgga 148
              ||||| ||||| |||| | ||||||||||||||| || | ||||| | ||||||  | | 
Sbjct: 150728 gctggtcgccgccgagctgccggagcccatccccgtcgttgatctcagccggctagccgg 150787

                                                                      
Query: 149    cgtcgacgaggccgaaaggctccgggcggcgctgcagacatggggcttcttcctgg 204
              || ||||||||| |  | |||| ||||||| |||||||  ||||||||||||||||
Sbjct: 150788 cgccgacgaggctgccaagctcagggcggctctgcagaattggggcttcttcctgg 150843



 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 94/116 (81%)
 Strand = Plus / Plus

                                                                          
Query: 89     gctggccgccgacgagtttccggagcccatccccctcatcgatcttacccggctcacgga 148
              ||||| ||||| |||| | ||||||||||||||| || | ||||| | ||||||  | | 
Sbjct: 112672 gctggtcgccgccgagctgccggagcccatccccgtcgttgatctcagccggctagccgg 112731

                                                                      
Query: 149    cgtcgacgaggccgaaaggctccgggcggcgctgcagacatggggcttcttcctgg 204
              || ||||||||| |  | |||| ||||||| |||||||  ||||||||||||||||
Sbjct: 112732 cgccgacgaggctgccaagctcagggcggctctgcagaattggggcttcttcctgg 112787



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                 
Query: 9      gtgcaggagctggctgcggccggcgtcgaggagcc 43
              ||||| |||||||| ||||||||||||||||||||
Sbjct: 150651 gtgcaagagctggcggcggccggcgtcgaggagcc 150685



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                 
Query: 9      gtgcaggagctggctgcggccggcgtcgaggagcc 43
              ||||| |||||||| ||||||||||||||||||||
Sbjct: 112595 gtgcaagagctggcggcggccggcgtcgaggagcc 112629
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 9        gtgcaggagctggctgcggccggcgtcgaggagccgccg 47
                ||||| |||||||| || |||||||||||||||||||||
Sbjct: 10387386 gtgcaagagctggcggcagccggcgtcgaggagccgccg 10387424
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>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0669G10
          Length = 133372

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 9     gtgcaggagctggctgcggccggcgtcgaggagccgccg 47
             ||||| |||||||| || |||||||||||||||||||||
Sbjct: 29808 gtgcaagagctggcggcagccggcgtcgaggagccgccg 29846
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>dbj|AK065581.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034J09, full
           insert sequence
          Length = 1729

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 9   gtgcaggagctggctgcggccggcgtcgaggagccgccg 47
           ||||| |||||||| || |||||||||||||||||||||
Sbjct: 380 gtgcaagagctggcggcagccggcgtcgaggagccgccg 418
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>ref|NM_197542.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0040D23.1), mRNA
          Length = 1494

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 261 gagttcttccggcagccggcggaagagaag 290
           ||||||||||||| ||||||||| ||||||
Sbjct: 271 gagttcttccggctgccggcggaggagaag 300
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 27     gccggcgtcgaggagccgccgc 48
              ||||||||||||||||||||||
Sbjct: 953188 gccggcgtcgaggagccgccgc 953167
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>gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05 genomic sequence, complete
             sequence
          Length = 105841

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 261   gagttcttccggcagccggcggaagagaag 290
             ||||||||||||| ||||||||| ||||||
Sbjct: 83216 gagttcttccggctgccggcggaggagaag 83245
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>gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D23 genomic sequence,
            complete sequence
          Length = 134102

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 261  gagttcttccggcagccggcggaagagaag 290
            ||||||||||||| ||||||||| ||||||
Sbjct: 7862 gagttcttccggctgccggcggaggagaag 7891
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 137     ccggctcacggacgtcgacgag 158
               ||||||||||||||||||||||
Sbjct: 4560844 ccggctcacggacgtcgacgag 4560865
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 261      gagttcttccggcagccggcggaagagaag 290
                ||||||||||||| ||||||||| ||||||
Sbjct: 20367714 gagttcttccggctgccggcggaggagaag 20367743
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>dbj|AK061357.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-B08, full
           insert sequence
          Length = 1004

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 261 gagttcttccggcagccggcggaagagaag 290
           ||||||||||||| ||||||||| ||||||
Sbjct: 386 gagttcttccggctgccggcggaggagaag 415
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 261      gagttcttccggcagccggcggaagagaag 290
                ||||||||||||| ||||||||| ||||||
Sbjct: 20378986 gagttcttccggctgccggcggaggagaag 20379015
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>ref|XM_541613.2| PREDICTED: Canis familiaris similar to Spectrin beta chain, brain 3
            (Spectrin, non-erythroid beta chain 3) (Beta-IV spectrin)
            (LOC484499), mRNA
          Length = 8696

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 13   aggagctggctgcggccggcg 33
            |||||||||||||||||||||
Sbjct: 2266 aggagctggctgcggccggcg 2286
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>ref|XM_476744.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1298

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 260 ggagttcttccggcagccggcgga 283
           |||||||||||||| |||||||||
Sbjct: 321 ggagttcttccggctgccggcgga 344
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>ref|XM_595616.2| PREDICTED: Bos taurus similar to Myosin-9 (Myosin heavy chain,
           nonmuscle IIa) (Nonmuscle myosin heavy chain IIa) (NMMHC
           II-a) (NMMHC-IIA) (Cellular myosin heavy chain, type A)
           (Nonmuscle myosin heavy chain-A) (NMMHC-A) (LOC517447),
           mRNA
          Length = 705

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  acgtggtgcaggagcaggac 74
           ||||||||||||||||||||
Sbjct: 446 acgtggtgcaggagcaggac 465
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 157     aggccgaaaggctccgggcggcgc 180
               ||||||||| ||||||||||||||
Sbjct: 2006697 aggccgaaacgctccgggcggcgc 2006720
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>emb|BX640452.1| Bordetella bronchiseptica strain RB50, complete genome; segment 16/16
          Length = 123385

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   cggcgacctgctggccgccg 99
            ||||||||||||||||||||
Sbjct: 7589 cggcgacctgctggccgccg 7608
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>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14
          Length = 255260

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     cggcgacctgctggccgccg 99
              ||||||||||||||||||||
Sbjct: 143417 cggcgacctgctggccgccg 143436
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>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12
          Length = 346359

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     cggcgacctgctggccgccg 99
              ||||||||||||||||||||
Sbjct: 169204 cggcgacctgctggccgccg 169223
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>gb|AF512431.1| Saccharothrix mutabilis subsp. capreolus nonribosomal peptide
             synthetase gene cluster, partial sequence
          Length = 28890

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    ggccggcgtcgaggagccgccgcg 49
             ||||||||||||||||| ||||||
Sbjct: 17600 ggccggcgtcgaggagctgccgcg 17577
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 260     ggagttcttccggcagccggcgga 283
               |||||||||||||| |||||||||
Sbjct: 3732189 ggagttcttccggctgccggcgga 3732212
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>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0050F10
          Length = 151986

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 260   ggagttcttccggcagccggcgga 283
             |||||||||||||| |||||||||
Sbjct: 76540 ggagttcttccggctgccggcgga 76563
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>dbj|AK121818.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099A15, full
           insert sequence
          Length = 1301

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 260 ggagttcttccggcagccggcgga 283
           |||||||||||||| |||||||||
Sbjct: 325 ggagttcttccggctgccggcgga 348
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>dbj|AK060318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F03, full
           insert sequence
          Length = 1298

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 260 ggagttcttccggcagccggcgga 283
           |||||||||||||| |||||||||
Sbjct: 321 ggagttcttccggctgccggcgga 344
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>gb|AY104706.1| Zea mays PCO076122 mRNA sequence
          Length = 1382

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 260 ggagttcttccggcagccggcgga 283
           |||||||||||||| |||||||||
Sbjct: 359 ggagttcttccggctgccggcgga 382
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 73      acggtcacggcgacctgctggccg 96
               |||| |||||||||||||||||||
Sbjct: 1586764 acgggcacggcgacctgctggccg 1586787
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     acggcgacctgctggccgcc 98
              ||||||||||||||||||||
Sbjct: 662701 acggcgacctgctggccgcc 662720


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,328,577
Number of Sequences: 3902068
Number of extensions: 2328577
Number of successful extensions: 60580
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59851
Number of HSP's gapped (non-prelim): 721
length of query: 323
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 301
effective length of database: 17,147,199,772
effective search space: 5161307131372
effective search space used: 5161307131372
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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